0 nestedRepeats,237 transMapEnsemblV5,669 transMapEstV5,638 transMapRefSeqV5,638 transMapRnaV5,638 transMapV5,744 uniprot,1822 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.2 augustusGene,136 0.5 augustusGene,138 mrna,381 transMapEnsemblV5,224 transMapEnsemblV5,358 transMapEstV5,193 transMapEstV5,327 transMapRefSeqV5,193 transMapRefSeqV5,327 transMapRnaV5,193 transMapRnaV5,327 transMapV5,299 transMapV5,433 xenoRefGene,261 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 000 gap,172 transMapV5,109 1 augustusGene,310 chainDanRer7,385 chainDanRer7,516 chainDanRer7,706 chainDanRer7,1105 chainFr3,385 chainFr3,516 chainFr3,706 chainFr3,1105 chainGalGal6,385 chainGalGal6,516 chainGalGal6,706 chainGalGal6,1105 chainGasAcu1,385 chainGasAcu1,516 chainGasAcu1,706 chainGasAcu1,1105 chainHg19,385 chainHg19,516 chainHg19,706 chainHg19,1105 chainMm10,385 chainMm10,516 chainMm10,706 chainMm10,1105 chainNetDanRer7,388 chainNetDanRer7,519 chainNetDanRer7,709 chainNetDanRer7,1108 chainNetFr3,388 chainNetFr3,519 chainNetFr3,709 chainNetFr3,1108 chainNetGalGal6,388 chainNetGalGal6,519 chainNetGalGal6,709 chainNetGalGal6,1108 chainNetGasAcu1,388 chainNetGasAcu1,519 chainNetGasAcu1,709 chainNetGasAcu1,1108 chainNetHg19,388 chainNetHg19,519 chainNetHg19,709 chainNetHg19,1108 chainNetMm10,388 chainNetMm10,519 chainNetMm10,709 chainNetMm10,1108 chainNetOryLat2,394 chainNetOryLat2,525 chainNetOryLat2,715 chainNetOryLat2,1114 chainOryLat2,391 chainOryLat2,522 chainOryLat2,712 chainOryLat2,1111 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 ensGene,200 ensGene,202 genscan,227 gold,35 gold,153 gold,198 mrna,438 netDanRer7,385 netDanRer7,516 netDanRer7,706 netDanRer7,1105 netFr3,385 netFr3,516 netFr3,706 netFr3,1105 netGalGal6,385 netGalGal6,516 netGalGal6,706 netGalGal6,1105 netGasAcu1,385 netGasAcu1,516 netGasAcu1,706 netGasAcu1,1105 netHg19,385 netHg19,516 netHg19,706 netHg19,1105 netMm10,385 netMm10,516 netMm10,706 netMm10,1105 netOryLat2,391 netOryLat2,522 netOryLat2,712 netOryLat2,1111 tRNAs,93 tRNAs,462 transMapEnsemblV5,778 transMapEstV5,747 transMapRefSeqV5,747 transMapRnaV5,747 transMapV5,853 uniprot,1110 uniprot,1314 uniprot,1346 uniprot,1490 uniprot,1927 xenoMrna,455 xenoMrna,507 xenoRefGene,384 1.0 transMapEnsemblV5,366 transMapEstV5,335 transMapRefSeqV5,335 transMapRnaV5,335 transMapV5,441 10 uniprot,1928 100 augustusGene,134 chainDanRer7,1073 chainFr3,1073 chainGalGal6,1073 chainGasAcu1,1073 chainHg19,1073 chainMm10,1073 chainNetDanRer7,1076 chainNetFr3,1076 chainNetGalGal6,1076 chainNetGasAcu1,1076 chainNetHg19,1076 chainNetMm10,1076 chainNetOryLat2,1082 chainOryLat2,1079 microsat,70 nestedRepeats,230 netDanRer7,1073 netFr3,1073 netGalGal6,1073 netGasAcu1,1073 netHg19,1073 netMm10,1073 netOryLat2,1079 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 chainDanRer7,745 chainFr3,745 chainGasAcu1,745 chainNetDanRer7,748 chainNetFr3,748 chainNetGasAcu1,748 chainNetOryLat2,754 chainOryLat2,751 nestedRepeats,238 netDanRer7,745 netFr3,745 netGasAcu1,745 netOryLat2,751 1000-2000 augustusGene,161 1000000 transMapEnsemblV5,671 transMapEstV5,640 transMapRefSeqV5,640 transMapRnaV5,640 transMapV5,746 uniprot,1824 103-7 chainDanRer7,1106 chainFr3,1106 chainGalGal6,1106 chainGasAcu1,1106 chainHg19,1106 chainMm10,1106 chainNetDanRer7,1109 chainNetFr3,1109 chainNetGalGal6,1109 chainNetGasAcu1,1109 chainNetHg19,1109 chainNetMm10,1109 chainNetOryLat2,1115 chainOryLat2,1112 netDanRer7,1106 netFr3,1106 netGalGal6,1106 netGasAcu1,1106 netHg19,1106 netMm10,1106 netOryLat2,1112 10607616 nestedRepeats,394 10973072 nestedRepeats,361 11 chainDanRer7,702 chainDanRer7,709 chainFr3,702 chainFr3,709 chainGalGal6,702 chainGalGal6,709 chainGasAcu1,702 chainGasAcu1,709 chainHg19,702 chainHg19,709 chainMm10,702 chainMm10,709 chainNetDanRer7,705 chainNetDanRer7,712 chainNetFr3,705 chainNetFr3,712 chainNetGalGal6,705 chainNetGalGal6,712 chainNetGasAcu1,705 chainNetGasAcu1,712 chainNetHg19,705 chainNetHg19,712 chainNetMm10,705 chainNetMm10,712 chainNetOryLat2,711 chainNetOryLat2,718 chainOryLat2,708 chainOryLat2,715 netDanRer7,702 netDanRer7,709 netFr3,702 netFr3,709 netGalGal6,702 netGalGal6,709 netGasAcu1,702 netGasAcu1,709 netHg19,702 netHg19,709 netMm10,702 netMm10,709 netOryLat2,708 netOryLat2,715 tRNAs,409 tRNAs,411 tRNAs,505 1100 chainGalGal6,723 chainGalGal6,735 chainHg19,723 chainHg19,735 chainMm10,723 chainMm10,735 chainNetGalGal6,726 chainNetGalGal6,738 chainNetHg19,726 chainNetHg19,738 chainNetMm10,726 chainNetMm10,738 netGalGal6,723 netGalGal6,735 netHg19,723 netHg19,735 netMm10,723 netMm10,735 111 chainDanRer7,704 chainDanRer7,710 chainFr3,704 chainFr3,710 chainGalGal6,704 chainGalGal6,710 chainGasAcu1,704 chainGasAcu1,710 chainHg19,704 chainHg19,710 chainMm10,704 chainMm10,710 chainNetDanRer7,707 chainNetDanRer7,713 chainNetFr3,707 chainNetFr3,713 chainNetGalGal6,707 chainNetGalGal6,713 chainNetGasAcu1,707 chainNetGasAcu1,713 chainNetHg19,707 chainNetHg19,713 chainNetMm10,707 chainNetMm10,713 chainNetOryLat2,713 chainNetOryLat2,719 chainOryLat2,710 chainOryLat2,716 netDanRer7,704 netDanRer7,710 netFr3,704 netFr3,710 netGalGal6,704 netGalGal6,710 netGasAcu1,704 netGasAcu1,710 netHg19,704 netHg19,710 netMm10,704 netMm10,710 netOryLat2,710 netOryLat2,716 11484-9 chainDanRer7,1075 chainFr3,1075 chainGalGal6,1075 chainGasAcu1,1075 chainHg19,1075 chainMm10,1075 chainNetDanRer7,1078 chainNetFr3,1078 chainNetGalGal6,1078 chainNetGasAcu1,1078 chainNetHg19,1078 chainNetMm10,1078 chainNetOryLat2,1084 chainOryLat2,1081 netDanRer7,1075 netFr3,1075 netGalGal6,1075 netGasAcu1,1075 netHg19,1075 netMm10,1075 netOryLat2,1081 115-26 chainDanRer7,1037 chainFr3,1037 chainGalGal6,1037 chainGasAcu1,1037 chainHg19,1037 chainMm10,1037 chainNetDanRer7,1040 chainNetFr3,1040 chainNetGalGal6,1040 chainNetGasAcu1,1040 chainNetHg19,1040 chainNetMm10,1040 chainNetOryLat2,1046 chainOryLat2,1043 netDanRer7,1037 netFr3,1037 netGalGal6,1037 netGasAcu1,1037 netHg19,1037 netMm10,1037 netOryLat2,1043 11752248 ensGene,205 117900 chainDanRer7,726 chainDanRer7,738 chainFr3,726 chainFr3,738 chainGasAcu1,726 chainGasAcu1,738 chainNetDanRer7,729 chainNetDanRer7,741 chainNetFr3,729 chainNetFr3,741 chainNetGasAcu1,729 chainNetGasAcu1,741 chainNetOryLat2,735 chainNetOryLat2,747 chainOryLat2,732 chainOryLat2,744 netDanRer7,726 netDanRer7,738 netFr3,726 netFr3,738 netGasAcu1,726 netGasAcu1,738 netOryLat2,732 netOryLat2,744 118300 chainDanRer7,750 chainFr3,750 chainGasAcu1,750 chainNetDanRer7,753 chainNetFr3,753 chainNetGasAcu1,753 chainNetOryLat2,759 chainOryLat2,756 netDanRer7,750 netFr3,750 netGasAcu1,750 netOryLat2,756 11928468 chainDanRer7,1039 chainFr3,1039 chainGalGal6,1039 chainGasAcu1,1039 chainHg19,1039 chainMm10,1039 chainNetDanRer7,1042 chainNetFr3,1042 chainNetGalGal6,1042 chainNetGasAcu1,1042 chainNetHg19,1042 chainNetMm10,1042 chainNetOryLat2,1048 chainOryLat2,1045 netDanRer7,1039 netFr3,1039 netGalGal6,1039 netGasAcu1,1039 netHg19,1039 netMm10,1039 netOryLat2,1045 11932250 mrna,462 xenoMrna,531 xenoRefGene,314 12 gaze,96 mrna,458 transMapEnsemblV5,748 transMapEnsemblV5,814 transMapEstV5,717 transMapEstV5,783 transMapRefSeqV5,717 transMapRefSeqV5,783 transMapRnaV5,717 transMapRnaV5,783 transMapV5,823 transMapV5,889 xenoMrna,527 xenoRefGene,310 12111 chainDanRer7,712 chainFr3,712 chainGalGal6,712 chainGasAcu1,712 chainHg19,712 chainMm10,712 chainNetDanRer7,715 chainNetFr3,715 chainNetGalGal6,715 chainNetGasAcu1,715 chainNetHg19,715 chainNetMm10,715 chainNetOryLat2,721 chainOryLat2,718 netDanRer7,712 netFr3,712 netGalGal6,712 netGasAcu1,712 netHg19,712 netMm10,712 netOryLat2,718 12213779 gaze,100 1247-56 tRNAs,508 12529312 chainDanRer7,1108 chainFr3,1108 chainGalGal6,1108 chainGasAcu1,1108 chainHg19,1108 chainMm10,1108 chainNetDanRer7,1111 chainNetFr3,1111 chainNetGalGal6,1111 chainNetGasAcu1,1111 chainNetHg19,1111 chainNetMm10,1111 chainNetOryLat2,1117 chainOryLat2,1114 netDanRer7,1108 netFr3,1108 netGalGal6,1108 netGasAcu1,1108 netHg19,1108 netMm10,1108 netOryLat2,1114 127-163 genscan,206 13 chainDanRer7,1104 chainFr3,1104 chainGalGal6,1104 chainGasAcu1,1104 chainHg19,1104 chainMm10,1104 chainNetDanRer7,1107 chainNetFr3,1107 chainNetGalGal6,1107 chainNetGasAcu1,1107 chainNetHg19,1107 chainNetMm10,1107 chainNetOryLat2,1113 chainOryLat2,1110 netDanRer7,1104 netFr3,1104 netGalGal6,1104 netGasAcu1,1104 netHg19,1104 netMm10,1104 netOryLat2,1110 1300 chainDanRer7,746 chainFr3,746 chainGasAcu1,746 chainNetDanRer7,749 chainNetFr3,749 chainNetGasAcu1,749 chainNetOryLat2,755 chainOryLat2,752 netDanRer7,746 netFr3,746 netGasAcu1,746 netOryLat2,752 134-41 windowmaskerSdust,112 1349163 gold,204 1400 chainGalGal6,747 chainHg19,747 chainMm10,747 chainNetGalGal6,750 chainNetHg19,750 chainNetMm10,750 netGalGal6,747 netHg19,747 netMm10,747 1418-27 gaze,98 14500911 chainDanRer7,1077 chainFr3,1077 chainGalGal6,1077 chainGasAcu1,1077 chainHg19,1077 chainMm10,1077 chainNetDanRer7,1080 chainNetFr3,1080 chainNetGalGal6,1080 chainNetGasAcu1,1080 chainNetHg19,1080 chainNetMm10,1080 chainNetOryLat2,1086 chainOryLat2,1083 netDanRer7,1077 netFr3,1077 netGalGal6,1077 netGasAcu1,1077 netHg19,1077 netMm10,1077 netOryLat2,1083 14534192 augustusGene,340 14681350 mrna,444 xenoMrna,513 15 gold,39 gold,206 microsat,30 microsat,79 microsat,130 simpleRepeat,90 tRNAs,95 windowmaskerSdust,109 xenoRefGene,233 15108278 uniprot,2051 152111 chainDanRer7,715 chainFr3,715 chainGalGal6,715 chainGasAcu1,715 chainHg19,715 chainMm10,715 chainNetDanRer7,718 chainNetFr3,718 chainNetGalGal6,718 chainNetGasAcu1,718 chainNetHg19,718 chainNetMm10,718 chainNetOryLat2,724 chainOryLat2,721 netDanRer7,715 netFr3,715 netGalGal6,715 netGasAcu1,715 netHg19,715 netMm10,715 netOryLat2,721 15600 chainGalGal6,726 chainGalGal6,738 chainHg19,726 chainHg19,738 chainMm10,726 chainMm10,738 chainNetGalGal6,729 chainNetGalGal6,741 chainNetHg19,729 chainNetHg19,741 chainNetMm10,729 chainNetMm10,741 netGalGal6,726 netGalGal6,738 netHg19,726 netHg19,738 netMm10,726 netMm10,738 15608248 xenoRefGene,390 16 nestedRepeats,357 16000 chainGalGal6,750 chainHg19,750 chainMm10,750 chainNetGalGal6,753 chainNetHg19,753 chainNetMm10,753 netGalGal6,750 netHg19,750 netMm10,750 16287941 windowmaskerSdust,114 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 transMapEnsemblV5,747 transMapEstV5,716 transMapRefSeqV5,716 transMapRnaV5,716 transMapV5,822 1763-73 transMapEnsemblV5,749 transMapEstV5,718 transMapRefSeqV5,718 transMapRnaV5,718 transMapV5,824 17989246 transMapEnsemblV5,751 transMapEstV5,720 transMapRefSeqV5,720 transMapRnaV5,720 transMapV5,826 18085818 transMapEnsemblV5,817 transMapEstV5,786 transMapRefSeqV5,786 transMapRnaV5,786 transMapV5,892 18218656 augustusGene,315 transMapEnsemblV5,783 transMapEstV5,752 transMapRefSeqV5,752 transMapRnaV5,752 transMapV5,858 1870126 tRNAs,439 18984615 tRNAs,391 19 augustusGene,335 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1988 tRNAs,350 1990 blastHg18KG,171 1991 tRNAs,432 1994 tRNAs,407 tRNAs,503 1996 nestedRepeats,410 1996-2010 nestedRepeats,334 1997 genscan,149 genscan,223 tRNAs,460 1998 genscan,167 genscan,204 1999 microsat,103 microsat,128 nestedRepeats,388 simpleRepeat,65 simpleRepeat,88 2 augustusGene,142 augustusGene,337 chainDanRer7,419 chainDanRer7,424 chainDanRer7,707 chainFr3,419 chainFr3,424 chainFr3,707 chainGalGal6,419 chainGalGal6,424 chainGalGal6,707 chainGasAcu1,419 chainGasAcu1,424 chainGasAcu1,707 chainHg19,419 chainHg19,424 chainHg19,707 chainMm10,419 chainMm10,424 chainMm10,707 chainNetDanRer7,422 chainNetDanRer7,427 chainNetDanRer7,710 chainNetFr3,422 chainNetFr3,427 chainNetFr3,710 chainNetGalGal6,422 chainNetGalGal6,427 chainNetGalGal6,710 chainNetGasAcu1,422 chainNetGasAcu1,427 chainNetGasAcu1,710 chainNetHg19,422 chainNetHg19,427 chainNetHg19,710 chainNetMm10,422 chainNetMm10,427 chainNetMm10,710 chainNetOryLat2,428 chainNetOryLat2,433 chainNetOryLat2,716 chainOryLat2,425 chainOryLat2,430 chainOryLat2,713 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 microsat,66 microsat,132 netDanRer7,419 netDanRer7,424 netDanRer7,707 netFr3,419 netFr3,424 netFr3,707 netGalGal6,419 netGalGal6,424 netGalGal6,707 netGasAcu1,419 netGasAcu1,424 netGasAcu1,707 netHg19,419 netHg19,424 netHg19,707 netMm10,419 netMm10,424 netMm10,707 netOryLat2,425 netOryLat2,430 netOryLat2,713 simpleRepeat,92 uniprot,1121 uniprot,1331 windowmaskerSdust,111 2-3 uniprot,1572 20 chainDanRer7,1074 chainFr3,1074 chainGalGal6,1074 chainGasAcu1,1074 chainHg19,1074 chainMm10,1074 chainNetDanRer7,1077 chainNetFr3,1077 chainNetGalGal6,1077 chainNetGasAcu1,1077 chainNetHg19,1077 chainNetMm10,1077 chainNetOryLat2,1083 chainOryLat2,1080 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 netDanRer7,1074 netFr3,1074 netGalGal6,1074 netGasAcu1,1074 netHg19,1074 netMm10,1074 netOryLat2,1080 tRNAs,123 transMapEnsemblV5,374 transMapEstV5,343 transMapRefSeqV5,343 transMapRnaV5,343 transMapV5,449 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 chainDanRer7,680 chainFr3,680 chainGasAcu1,680 chainNetDanRer7,683 chainNetFr3,683 chainNetGasAcu1,683 nestedRepeats,63 nestedRepeats,355 netDanRer7,680 netFr3,680 netGasAcu1,680 2002 chainDanRer7,1036 chainFr3,1036 chainGalGal6,1036 chainGasAcu1,1036 chainHg19,1036 chainMm10,1036 chainNetDanRer7,1039 chainNetFr3,1039 chainNetGalGal6,1039 chainNetGasAcu1,1039 chainNetHg19,1039 chainNetMm10,1039 chainNetOryLat2,1045 chainOryLat2,1042 ensGene,47 ensGene,198 gaze,94 mrna,456 netDanRer7,1036 netFr3,1036 netGalGal6,1036 netGasAcu1,1036 netHg19,1036 netMm10,1036 netOryLat2,1042 xenoMrna,525 xenoRefGene,308 2003 augustusGene,333 chainDanRer7,1070 chainDanRer7,1102 chainFr3,1070 chainFr3,1102 chainGalGal6,1070 chainGalGal6,1102 chainGasAcu1,1070 chainGasAcu1,1102 chainHg19,1070 chainHg19,1102 chainMm10,1070 chainMm10,1102 chainNetDanRer7,1073 chainNetDanRer7,1105 chainNetFr3,1073 chainNetFr3,1105 chainNetGalGal6,1073 chainNetGalGal6,1105 chainNetGasAcu1,1073 chainNetGasAcu1,1105 chainNetHg19,1073 chainNetHg19,1105 chainNetMm10,1073 chainNetMm10,1105 chainNetOryLat2,1079 chainNetOryLat2,1111 chainOryLat2,1076 chainOryLat2,1108 netDanRer7,1070 netDanRer7,1102 netFr3,1070 netFr3,1102 netGalGal6,1070 netGalGal6,1102 netGasAcu1,1070 netGasAcu1,1102 netHg19,1070 netHg19,1102 netMm10,1070 netMm10,1102 netOryLat2,1076 netOryLat2,1108 2004 mrna,436 uniprot,2045 xenoMrna,505 2005 chainNetOryLat2,6 chainNetOryLat2,72 chainNetOryLat2,308 chainNetOryLat2Viewchain,4 chainNetOryLat2Viewnet,4 chainOryLat2,5 chainOryLat2,69 chainOryLat2,305 netOryLat2,5 netOryLat2,69 netOryLat2,305 xenoRefGene,382 2006 chainGasAcu1,5 chainGasAcu1,67 chainGasAcu1,301 chainNetGasAcu1,6 chainNetGasAcu1,70 chainNetGasAcu1,304 chainNetGasAcu1Viewchain,4 chainNetGasAcu1Viewnet,4 netGasAcu1,5 netGasAcu1,67 netGasAcu1,301 windowmaskerSdust,107 2007 chainDanRer7,1009 chainFr3,1009 chainGalGal6,1009 chainGasAcu1,1009 chainHg19,1009 chainMm10,1009 chainNetDanRer7,1012 chainNetFr3,1012 chainNetGalGal6,1012 chainNetGasAcu1,1012 chainNetHg19,1012 chainNetMm10,1012 chainNetOryLat2,1018 chainOryLat2,1015 gold,18 netDanRer7,1009 netFr3,1009 netGalGal6,1009 netGasAcu1,1009 netHg19,1009 netMm10,1009 netOryLat2,1015 transMapEnsemblV5,745 transMapEnsemblV5,811 transMapEstV5,714 transMapEstV5,780 transMapRefSeqV5,714 transMapRefSeqV5,780 transMapRnaV5,714 transMapRnaV5,780 transMapV5,820 transMapV5,886 2008 augustusGene,308 transMapEnsemblV5,776 transMapEstV5,745 transMapRefSeqV5,745 transMapRnaV5,745 transMapV5,851 2009 chainHg19,5 chainHg19,67 chainHg19,301 chainNetHg19,6 chainNetHg19,70 chainNetHg19,304 chainNetHg19Viewchain,4 chainNetHg19Viewnet,4 netHg19,5 netHg19,67 netHg19,301 tRNAs,384 2010 chainDanRer7,5 chainDanRer7,67 chainDanRer7,301 chainNetDanRer7,6 chainNetDanRer7,70 chainNetDanRer7,304 chainNetDanRer7Viewchain,4 chainNetDanRer7Viewnet,4 netDanRer7,5 netDanRer7,67 netDanRer7,301 2011 chainFr3,5 chainFr3,67 chainFr3,301 chainMm10,5 chainMm10,67 chainMm10,301 chainNetFr3,6 chainNetFr3,70 chainNetFr3,304 chainNetFr3Viewchain,4 chainNetFr3Viewnet,4 chainNetMm10,6 chainNetMm10,70 chainNetMm10,304 chainNetMm10Viewchain,4 chainNetMm10Viewnet,4 netFr3,5 netFr3,67 netFr3,301 netMm10,5 netMm10,67 netMm10,301 2012 uniprot,2000 2014 xenoRefGene,349 2018 chainGalGal6,5 chainGalGal6,67 chainGalGal6,301 chainNetGalGal6,6 chainNetGalGal6,70 chainNetGalGal6,304 chainNetGalGal6Viewchain,4 chainNetGalGal6Viewnet,4 netGalGal6,5 netGalGal6,67 netGalGal6,301 2022_03 uniprot,1911 2023 uniprot,1191 206 gold,40 2079-88 tRNAs,412 21 gold,138 2111 chainDanRer7,711 chainFr3,711 chainGalGal6,711 chainGasAcu1,711 chainHg19,711 chainMm10,711 chainNetDanRer7,714 chainNetFr3,714 chainNetGalGal6,714 chainNetGasAcu1,714 chainNetHg19,714 chainNetMm10,714 chainNetOryLat2,720 chainOryLat2,717 netDanRer7,711 netFr3,711 netGalGal6,711 netGasAcu1,711 netHg19,711 netMm10,711 netOryLat2,717 215 blastHg18KG,174 217900 chainDanRer7,727 chainDanRer7,739 chainFr3,727 chainFr3,739 chainGasAcu1,727 chainGasAcu1,739 chainNetDanRer7,730 chainNetDanRer7,742 chainNetFr3,730 chainNetFr3,742 chainNetGasAcu1,730 chainNetGasAcu1,742 chainNetOryLat2,736 chainNetOryLat2,748 chainOryLat2,733 chainOryLat2,745 netDanRer7,727 netDanRer7,739 netFr3,727 netFr3,739 netGasAcu1,727 netGasAcu1,739 netOryLat2,733 netOryLat2,745 218300 chainDanRer7,751 chainFr3,751 chainGasAcu1,751 chainNetDanRer7,754 chainNetFr3,754 chainNetGasAcu1,754 chainNetOryLat2,760 chainOryLat2,757 netDanRer7,751 netFr3,751 netGasAcu1,751 netOryLat2,757 22 tRNAs,410 tRNAs,506 windowmaskerSdust,110 220 tRNAs,435 22102590 uniprot,2007 225 transMapEnsemblV5,716 transMapEstV5,685 transMapRefSeqV5,685 transMapRnaV5,685 transMapV5,791 22900 chainDanRer7,724 chainDanRer7,736 chainFr3,724 chainFr3,736 chainGasAcu1,724 chainGasAcu1,736 chainNetDanRer7,727 chainNetDanRer7,739 chainNetFr3,727 chainNetFr3,739 chainNetGasAcu1,727 chainNetGasAcu1,739 chainNetOryLat2,733 chainNetOryLat2,745 chainOryLat2,730 chainOryLat2,742 netDanRer7,724 netDanRer7,736 netFr3,724 netFr3,736 netGasAcu1,724 netGasAcu1,736 netOryLat2,730 netOryLat2,742 23 uniprot,2047 23300 chainDanRer7,748 chainFr3,748 chainGasAcu1,748 chainNetDanRer7,751 chainNetFr3,751 chainNetGasAcu1,751 chainNetOryLat2,757 chainOryLat2,754 netDanRer7,748 netFr3,748 netGasAcu1,748 netOryLat2,754 24 augustusGene,311 transMapEnsemblV5,779 transMapEstV5,748 transMapRefSeqV5,748 transMapRnaV5,748 transMapV5,854 24259432 xenoRefGene,356 25 genscan,225 tRNAs,463 transMapV5,112 xenoMrna,462 xenoRefGene,268 252111 chainDanRer7,716 chainFr3,716 chainGalGal6,716 chainGasAcu1,716 chainHg19,716 chainMm10,716 chainNetDanRer7,719 chainNetFr3,719 chainNetGalGal6,719 chainNetGasAcu1,719 chainNetHg19,719 chainNetMm10,719 chainNetOryLat2,725 chainOryLat2,722 netDanRer7,716 netFr3,716 netGalGal6,716 netGasAcu1,716 netHg19,716 netMm10,716 netOryLat2,722 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 268 genscan,226 27 microsat,131 simpleRepeat,91 2900 chainDanRer7,723 chainDanRer7,735 chainFr3,723 chainFr3,735 chainGasAcu1,723 chainGasAcu1,735 chainNetDanRer7,726 chainNetDanRer7,738 chainNetFr3,726 chainNetFr3,738 chainNetGasAcu1,726 chainNetGasAcu1,738 chainNetOryLat2,732 chainNetOryLat2,744 chainOryLat2,729 chainOryLat2,741 netDanRer7,723 netDanRer7,735 netFr3,723 netFr3,735 netGasAcu1,723 netGasAcu1,735 netOryLat2,729 netOryLat2,741 296 gold,207 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 3 augustusGene,140 blastHg18KG,175 chainDanRer7,431 chainDanRer7,708 chainFr3,431 chainFr3,708 chainGalGal6,431 chainGalGal6,708 chainGasAcu1,431 chainGasAcu1,708 chainHg19,431 chainHg19,708 chainMm10,431 chainMm10,708 chainNetDanRer7,434 chainNetDanRer7,711 chainNetFr3,434 chainNetFr3,711 chainNetGalGal6,434 chainNetGalGal6,711 chainNetGasAcu1,434 chainNetGasAcu1,711 chainNetHg19,434 chainNetHg19,711 chainNetMm10,434 chainNetMm10,711 chainNetOryLat2,440 chainNetOryLat2,717 chainOryLat2,437 chainOryLat2,714 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 microsat,68 netDanRer7,431 netDanRer7,708 netFr3,431 netFr3,708 netGalGal6,431 netGalGal6,708 netGasAcu1,431 netGasAcu1,708 netHg19,431 netHg19,708 netMm10,431 netMm10,708 netOryLat2,437 netOryLat2,714 tRNAs,436 transMapEnsemblV5,813 transMapEstV5,782 transMapRefSeqV5,782 transMapRnaV5,782 transMapV5,888 uniprot,1123 uniprot,1194 xenoMrna,88 3.1 augustusGene,24 30 chainDanRer7,1072 chainFr3,1072 chainGalGal6,1072 chainGasAcu1,1072 chainHg19,1072 chainMm10,1072 chainNetDanRer7,1075 chainNetFr3,1075 chainNetGalGal6,1075 chainNetGasAcu1,1075 chainNetHg19,1075 chainNetMm10,1075 chainNetOryLat2,1081 chainOryLat2,1078 ensGene,201 netDanRer7,1072 netFr3,1072 netGalGal6,1072 netGasAcu1,1072 netHg19,1072 netMm10,1072 netOryLat2,1078 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 3000 chainNetOryLat2,689 chainOryLat2,686 netOryLat2,686 31600 chainGalGal6,727 chainGalGal6,739 chainHg19,727 chainHg19,739 chainMm10,727 chainMm10,739 chainNetGalGal6,730 chainNetGalGal6,742 chainNetHg19,730 chainNetHg19,742 chainNetMm10,730 chainNetMm10,742 netGalGal6,727 netGalGal6,739 netHg19,727 netHg19,739 netMm10,727 netMm10,739 317900 chainDanRer7,728 chainDanRer7,740 chainFr3,728 chainFr3,740 chainGasAcu1,728 chainGasAcu1,740 chainNetDanRer7,731 chainNetDanRer7,743 chainNetFr3,731 chainNetFr3,743 chainNetGasAcu1,731 chainNetGasAcu1,743 chainNetOryLat2,737 chainNetOryLat2,749 chainOryLat2,734 chainOryLat2,746 netDanRer7,728 netDanRer7,740 netFr3,728 netFr3,740 netGasAcu1,728 netGasAcu1,740 netOryLat2,734 netOryLat2,746 318300 chainDanRer7,752 chainFr3,752 chainGasAcu1,752 chainNetDanRer7,755 chainNetFr3,755 chainNetGasAcu1,755 chainNetOryLat2,761 chainOryLat2,758 netDanRer7,752 netFr3,752 netGasAcu1,752 netOryLat2,758 32 mrna,439 xenoMrna,508 32000 chainGalGal6,751 chainHg19,751 chainMm10,751 chainNetGalGal6,754 chainNetHg19,754 chainNetMm10,754 netGalGal6,751 netHg19,751 netMm10,751 32111 chainDanRer7,713 chainFr3,713 chainGalGal6,713 chainGasAcu1,713 chainHg19,713 chainMm10,713 chainNetDanRer7,716 chainNetFr3,716 chainNetGalGal6,716 chainNetGasAcu1,716 chainNetHg19,716 chainNetMm10,716 chainNetOryLat2,722 chainOryLat2,719 netDanRer7,713 netFr3,713 netGalGal6,713 netGasAcu1,713 netHg19,713 netMm10,713 netOryLat2,719 325 chainGalGal6,718 chainGalGal6,730 chainHg19,718 chainHg19,730 chainMm10,718 chainMm10,730 chainNetGalGal6,721 chainNetGalGal6,733 chainNetHg19,721 chainNetHg19,733 chainNetMm10,721 chainNetMm10,733 netGalGal6,718 netGalGal6,730 netHg19,718 netHg19,730 netMm10,718 netMm10,730 33 xenoRefGene,385 3300 chainDanRer7,747 chainFr3,747 chainGasAcu1,747 chainNetDanRer7,750 chainNetFr3,750 chainNetGasAcu1,750 chainNetOryLat2,756 chainOryLat2,753 netDanRer7,747 netFr3,747 netGasAcu1,747 netOryLat2,753 350 chainDanRer7,718 chainDanRer7,730 chainFr3,718 chainFr3,730 chainGasAcu1,718 chainGasAcu1,730 chainNetDanRer7,721 chainNetDanRer7,733 chainNetFr3,721 chainNetFr3,733 chainNetGasAcu1,721 chainNetGasAcu1,733 chainNetOryLat2,727 chainNetOryLat2,739 chainOryLat2,724 chainOryLat2,736 gold,54 gold,252 netDanRer7,718 netDanRer7,730 netFr3,718 netFr3,730 netGasAcu1,718 netGasAcu1,730 netOryLat2,724 netOryLat2,736 360 chainGalGal6,719 chainGalGal6,731 chainHg19,719 chainHg19,731 chainMm10,719 chainMm10,731 chainNetGalGal6,722 chainNetGalGal6,734 chainNetHg19,722 chainNetHg19,734 chainNetMm10,722 chainNetMm10,734 netGalGal6,719 netGalGal6,731 netHg19,719 netHg19,731 netMm10,719 netMm10,731 3600 chainGalGal6,724 chainGalGal6,736 chainHg19,724 chainHg19,736 chainMm10,724 chainMm10,736 chainNetGalGal6,727 chainNetGalGal6,739 chainNetHg19,727 chainNetHg19,739 chainNetMm10,727 chainNetMm10,739 netGalGal6,724 netGalGal6,736 netHg19,724 netHg19,736 netMm10,724 netMm10,736 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 37 tRNAs,386 38-41 ensGene,203 39s ensGene,163 4 mrna,459 xenoMrna,528 xenoRefGene,311 40 uniprot,2002 400 chainGalGal6,720 chainGalGal6,732 chainHg19,720 chainHg19,732 chainMm10,720 chainMm10,732 chainNetGalGal6,723 chainNetGalGal6,735 chainNetHg19,723 chainNetHg19,735 chainNetMm10,723 chainNetMm10,735 netGalGal6,720 netGalGal6,732 netHg19,720 netHg19,732 netMm10,720 netMm10,732 transMapV5,108 4000 chainGalGal6,748 chainHg19,748 chainMm10,748 chainNetGalGal6,751 chainNetHg19,751 chainNetMm10,751 netGalGal6,748 netHg19,748 netMm10,748 403-410 blastHg18KG,176 418-420 nestedRepeats,359 42 xenoRefGene,351 425 chainDanRer7,719 chainDanRer7,731 chainFr3,719 chainFr3,731 chainGasAcu1,719 chainGasAcu1,731 chainNetDanRer7,722 chainNetDanRer7,734 chainNetFr3,722 chainNetFr3,734 chainNetGasAcu1,722 chainNetGasAcu1,734 chainNetOryLat2,728 chainNetOryLat2,740 chainOryLat2,725 chainOryLat2,737 netDanRer7,719 netDanRer7,731 netFr3,719 netFr3,731 netGasAcu1,719 netGasAcu1,731 netOryLat2,725 netOryLat2,737 45 tRNAs,180 45-60 tRNAs,200 450 chainDanRer7,720 chainDanRer7,732 chainFr3,720 chainFr3,732 chainGalGal6,721 chainGalGal6,733 chainGasAcu1,720 chainGasAcu1,732 chainHg19,721 chainHg19,733 chainMm10,721 chainMm10,733 chainNetDanRer7,723 chainNetDanRer7,735 chainNetFr3,723 chainNetFr3,735 chainNetGalGal6,724 chainNetGalGal6,736 chainNetGasAcu1,723 chainNetGasAcu1,735 chainNetHg19,724 chainNetHg19,736 chainNetMm10,724 chainNetMm10,736 chainNetOryLat2,729 chainNetOryLat2,741 chainOryLat2,726 chainOryLat2,738 netDanRer7,720 netDanRer7,732 netFr3,720 netFr3,732 netGalGal6,721 netGalGal6,733 netGasAcu1,720 netGasAcu1,732 netHg19,721 netHg19,733 netMm10,721 netMm10,733 netOryLat2,726 netOryLat2,738 464-70 uniprot,2049 5 augustusGene,312 blastHg18KG,173 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 gold,140 tRNAs,434 tRNAs,464 transMapEnsemblV5,9 transMapEnsemblV5,780 transMapEstV5,7 transMapEstV5,749 transMapRefSeqV5,8 transMapRefSeqV5,749 transMapRnaV5,8 transMapRnaV5,749 transMapV5,6 transMapV5,855 uniprot,2048 xenoMrna,86 5-base gc5Base,6 gc5Base,27 50 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 500 gap,150 gap,171 5000 chainGalGal6,680 chainHg19,680 chainMm10,680 chainNetGalGal6,683 chainNetHg19,683 chainNetMm10,683 netGalGal6,680 netHg19,680 netMm10,680 54038 gold,212 56600 chainGalGal6,728 chainGalGal6,740 chainHg19,728 chainHg19,740 chainMm10,728 chainMm10,740 chainNetGalGal6,731 chainNetGalGal6,743 chainNetHg19,731 chainNetHg19,743 chainNetMm10,731 chainNetMm10,743 netGalGal6,728 netGalGal6,740 netHg19,728 netHg19,740 netMm10,728 netMm10,740 57000 chainGalGal6,752 chainHg19,752 chainMm10,752 chainNetGalGal6,755 chainNetHg19,755 chainNetMm10,755 netGalGal6,752 netHg19,752 netMm10,752 573-80 microsat,133 simpleRepeat,93 57900 chainDanRer7,725 chainDanRer7,737 chainFr3,725 chainFr3,737 chainGasAcu1,725 chainGasAcu1,737 chainNetDanRer7,728 chainNetDanRer7,740 chainNetFr3,728 chainNetFr3,740 chainNetGasAcu1,728 chainNetGasAcu1,740 chainNetOryLat2,734 chainNetOryLat2,746 chainOryLat2,731 chainOryLat2,743 netDanRer7,725 netDanRer7,737 netFr3,725 netFr3,737 netGasAcu1,725 netGasAcu1,737 netOryLat2,731 netOryLat2,743 58300 chainDanRer7,749 chainFr3,749 chainGasAcu1,749 chainNetDanRer7,752 chainNetFr3,752 chainNetGasAcu1,752 chainNetOryLat2,758 chainOryLat2,755 netDanRer7,749 netFr3,749 netGasAcu1,749 netOryLat2,755 6 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 60 blastHg18KG,107 blastHg18KG,119 blastHg18KG,127 60.0 tRNAs,166 600 chainDanRer7,721 chainDanRer7,733 chainFr3,721 chainFr3,733 chainGalGal6,722 chainGalGal6,734 chainGasAcu1,721 chainGasAcu1,733 chainHg19,722 chainHg19,734 chainMm10,722 chainMm10,734 chainNetDanRer7,724 chainNetDanRer7,736 chainNetFr3,724 chainNetFr3,736 chainNetGalGal6,725 chainNetGalGal6,737 chainNetGasAcu1,724 chainNetGasAcu1,736 chainNetHg19,725 chainNetHg19,737 chainNetMm10,725 chainNetMm10,737 chainNetOryLat2,730 chainNetOryLat2,742 chainOryLat2,727 chainOryLat2,739 netDanRer7,721 netDanRer7,733 netFr3,721 netFr3,733 netGalGal6,722 netGalGal6,734 netGasAcu1,721 netGasAcu1,733 netHg19,722 netHg19,734 netMm10,722 netMm10,734 netOryLat2,727 netOryLat2,739 625 chainGalGal6,742 chainHg19,742 chainMm10,742 chainNetGalGal6,745 chainNetHg19,745 chainNetMm10,745 netGalGal6,742 netHg19,742 netMm10,742 637-44 augustusGene,313 transMapEnsemblV5,781 transMapEstV5,750 transMapRefSeqV5,750 transMapRnaV5,750 transMapV5,856 656-64 mrna,460 xenoMrna,529 xenoRefGene,312 657-63 nestedRepeats,392 659-71 tRNAs,437 660 chainGalGal6,743 chainHg19,743 chainMm10,743 chainNetGalGal6,746 chainNetHg19,746 chainNetMm10,746 netGalGal6,743 netHg19,743 netMm10,743 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 tRNAs,507 7.9x gold,32 gold,194 700 chainGalGal6,744 chainHg19,744 chainMm10,744 chainNetGalGal6,747 chainNetHg19,747 chainNetMm10,747 netGalGal6,744 netHg19,744 netMm10,744 72111 chainDanRer7,714 chainFr3,714 chainGalGal6,714 chainGasAcu1,714 chainHg19,714 chainMm10,714 chainNetDanRer7,717 chainNetFr3,717 chainNetGalGal6,717 chainNetGasAcu1,717 chainNetHg19,717 chainNetMm10,717 chainNetOryLat2,723 chainOryLat2,720 netDanRer7,714 netFr3,714 netGalGal6,714 netGasAcu1,714 netHg19,714 netMm10,714 netOryLat2,720 743-8 nestedRepeats,414 750 chainDanRer7,742 chainFr3,742 chainGalGal6,745 chainGasAcu1,742 chainHg19,745 chainMm10,745 chainNetDanRer7,745 chainNetFr3,745 chainNetGalGal6,748 chainNetGasAcu1,745 chainNetHg19,748 chainNetMm10,748 chainNetOryLat2,751 chainOryLat2,748 netDanRer7,742 netFr3,742 netGalGal6,745 netGasAcu1,742 netHg19,745 netMm10,745 netOryLat2,748 7600 chainGalGal6,725 chainGalGal6,737 chainHg19,725 chainHg19,737 chainMm10,725 chainMm10,737 chainNetGalGal6,728 chainNetGalGal6,740 chainNetHg19,728 chainNetHg19,740 chainNetMm10,728 chainNetMm10,740 netGalGal6,725 netGalGal6,737 netHg19,725 netHg19,737 netMm10,725 netMm10,737 78-94 genscan,228 8000 chainGalGal6,749 chainHg19,749 chainMm10,749 chainNetGalGal6,752 chainNetHg19,752 chainNetMm10,752 netGalGal6,749 netHg19,749 netMm10,749 8029015 tRNAs,414 8165140 tRNAs,510 825 chainDanRer7,743 chainFr3,743 chainGasAcu1,743 chainNetDanRer7,746 chainNetFr3,746 chainNetGasAcu1,746 chainNetOryLat2,752 chainOryLat2,749 netDanRer7,743 netFr3,743 netGasAcu1,743 netOryLat2,749 849 gold,36 gold,199 850 chainDanRer7,744 chainFr3,744 chainGasAcu1,744 chainNetDanRer7,747 chainNetFr3,747 chainNetGasAcu1,747 chainNetOryLat2,753 chainOryLat2,750 netDanRer7,744 netFr3,744 netGasAcu1,744 netOryLat2,750 8994846 nestedRepeats,416 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 gaze,97 nestedRepeats,358 nestedRepeats,390 90 gold,45 gold,222 900 chainDanRer7,722 chainDanRer7,734 chainFr3,722 chainFr3,734 chainGalGal6,746 chainGasAcu1,722 chainGasAcu1,734 chainHg19,746 chainMm10,746 chainNetDanRer7,725 chainNetDanRer7,737 chainNetFr3,725 chainNetFr3,737 chainNetGalGal6,749 chainNetGasAcu1,725 chainNetGasAcu1,737 chainNetHg19,749 chainNetMm10,749 chainNetOryLat2,731 chainNetOryLat2,743 chainOryLat2,728 chainOryLat2,740 netDanRer7,722 netDanRer7,734 netFr3,722 netFr3,734 netGalGal6,746 netGasAcu1,722 netGasAcu1,734 netHg19,746 netMm10,746 netOryLat2,728 netOryLat2,740 9023104 tRNAs,467 9149143 genscan,230 93 uniprot,1483 955-64 tRNAs,465 96 mrna,388 9862982 microsat,135 simpleRepeat,95 99-100 tRNAs,81 _alt uniprot,1419 _fix uniprot,1421 a augustusGene,116 augustusGene,128 augustusGene,152 augustusGene,215 augustusGene,218 augustusGene,233 augustusGene,323 augustusGene,328 chainDanRer7,75 chainDanRer7,144 chainDanRer7,196 chainDanRer7,451 chainDanRer7,461 chainDanRer7,465 chainDanRer7,532 chainDanRer7,549 chainDanRer7,552 chainDanRer7,618 chainDanRer7,623 chainDanRer7,628 chainDanRer7,632 chainDanRer7,643 chainDanRer7,675 chainDanRer7,794 chainDanRer7,808 chainDanRer7,814 chainDanRer7,820 chainDanRer7,824 chainDanRer7,827 chainDanRer7,855 chainDanRer7,1045 chainDanRer7,1069 chainDanRer7,1085 chainFr3,75 chainFr3,144 chainFr3,196 chainFr3,451 chainFr3,461 chainFr3,465 chainFr3,532 chainFr3,549 chainFr3,552 chainFr3,618 chainFr3,623 chainFr3,628 chainFr3,632 chainFr3,643 chainFr3,675 chainFr3,794 chainFr3,808 chainFr3,814 chainFr3,820 chainFr3,824 chainFr3,827 chainFr3,855 chainFr3,1045 chainFr3,1069 chainFr3,1085 chainGalGal6,75 chainGalGal6,144 chainGalGal6,196 chainGalGal6,451 chainGalGal6,461 chainGalGal6,465 chainGalGal6,532 chainGalGal6,549 chainGalGal6,552 chainGalGal6,618 chainGalGal6,623 chainGalGal6,628 chainGalGal6,632 chainGalGal6,643 chainGalGal6,675 chainGalGal6,794 chainGalGal6,808 chainGalGal6,814 chainGalGal6,820 chainGalGal6,824 chainGalGal6,827 chainGalGal6,855 chainGalGal6,1045 chainGalGal6,1069 chainGalGal6,1085 chainGasAcu1,75 chainGasAcu1,144 chainGasAcu1,196 chainGasAcu1,451 chainGasAcu1,461 chainGasAcu1,465 chainGasAcu1,532 chainGasAcu1,549 chainGasAcu1,552 chainGasAcu1,618 chainGasAcu1,623 chainGasAcu1,628 chainGasAcu1,632 chainGasAcu1,643 chainGasAcu1,675 chainGasAcu1,794 chainGasAcu1,808 chainGasAcu1,814 chainGasAcu1,820 chainGasAcu1,824 chainGasAcu1,827 chainGasAcu1,855 chainGasAcu1,1045 chainGasAcu1,1069 chainGasAcu1,1085 chainHg19,75 chainHg19,144 chainHg19,196 chainHg19,451 chainHg19,461 chainHg19,465 chainHg19,532 chainHg19,549 chainHg19,552 chainHg19,618 chainHg19,623 chainHg19,628 chainHg19,632 chainHg19,643 chainHg19,675 chainHg19,794 chainHg19,808 chainHg19,814 chainHg19,820 chainHg19,824 chainHg19,827 chainHg19,855 chainHg19,1045 chainHg19,1069 chainHg19,1085 chainMm10,75 chainMm10,144 chainMm10,196 chainMm10,451 chainMm10,461 chainMm10,465 chainMm10,532 chainMm10,549 chainMm10,552 chainMm10,618 chainMm10,623 chainMm10,628 chainMm10,632 chainMm10,643 chainMm10,675 chainMm10,794 chainMm10,808 chainMm10,814 chainMm10,820 chainMm10,824 chainMm10,827 chainMm10,855 chainMm10,1045 chainMm10,1069 chainMm10,1085 chainNetDanRer7,78 chainNetDanRer7,147 chainNetDanRer7,199 chainNetDanRer7,454 chainNetDanRer7,464 chainNetDanRer7,468 chainNetDanRer7,535 chainNetDanRer7,552 chainNetDanRer7,555 chainNetDanRer7,621 chainNetDanRer7,626 chainNetDanRer7,631 chainNetDanRer7,635 chainNetDanRer7,646 chainNetDanRer7,678 chainNetDanRer7,797 chainNetDanRer7,811 chainNetDanRer7,817 chainNetDanRer7,823 chainNetDanRer7,827 chainNetDanRer7,830 chainNetDanRer7,858 chainNetDanRer7,1048 chainNetDanRer7,1072 chainNetDanRer7,1088 chainNetFr3,78 chainNetFr3,147 chainNetFr3,199 chainNetFr3,454 chainNetFr3,464 chainNetFr3,468 chainNetFr3,535 chainNetFr3,552 chainNetFr3,555 chainNetFr3,621 chainNetFr3,626 chainNetFr3,631 chainNetFr3,635 chainNetFr3,646 chainNetFr3,678 chainNetFr3,797 chainNetFr3,811 chainNetFr3,817 chainNetFr3,823 chainNetFr3,827 chainNetFr3,830 chainNetFr3,858 chainNetFr3,1048 chainNetFr3,1072 chainNetFr3,1088 chainNetGalGal6,78 chainNetGalGal6,147 chainNetGalGal6,199 chainNetGalGal6,454 chainNetGalGal6,464 chainNetGalGal6,468 chainNetGalGal6,535 chainNetGalGal6,552 chainNetGalGal6,555 chainNetGalGal6,621 chainNetGalGal6,626 chainNetGalGal6,631 chainNetGalGal6,635 chainNetGalGal6,646 chainNetGalGal6,678 chainNetGalGal6,797 chainNetGalGal6,811 chainNetGalGal6,817 chainNetGalGal6,823 chainNetGalGal6,827 chainNetGalGal6,830 chainNetGalGal6,858 chainNetGalGal6,1048 chainNetGalGal6,1072 chainNetGalGal6,1088 chainNetGasAcu1,78 chainNetGasAcu1,147 chainNetGasAcu1,199 chainNetGasAcu1,454 chainNetGasAcu1,464 chainNetGasAcu1,468 chainNetGasAcu1,535 chainNetGasAcu1,552 chainNetGasAcu1,555 chainNetGasAcu1,621 chainNetGasAcu1,626 chainNetGasAcu1,631 chainNetGasAcu1,635 chainNetGasAcu1,646 chainNetGasAcu1,678 chainNetGasAcu1,797 chainNetGasAcu1,811 chainNetGasAcu1,817 chainNetGasAcu1,823 chainNetGasAcu1,827 chainNetGasAcu1,830 chainNetGasAcu1,858 chainNetGasAcu1,1048 chainNetGasAcu1,1072 chainNetGasAcu1,1088 chainNetHg19,78 chainNetHg19,147 chainNetHg19,199 chainNetHg19,454 chainNetHg19,464 chainNetHg19,468 chainNetHg19,535 chainNetHg19,552 chainNetHg19,555 chainNetHg19,621 chainNetHg19,626 chainNetHg19,631 chainNetHg19,635 chainNetHg19,646 chainNetHg19,678 chainNetHg19,797 chainNetHg19,811 chainNetHg19,817 chainNetHg19,823 chainNetHg19,827 chainNetHg19,830 chainNetHg19,858 chainNetHg19,1048 chainNetHg19,1072 chainNetHg19,1088 chainNetMm10,78 chainNetMm10,147 chainNetMm10,199 chainNetMm10,454 chainNetMm10,464 chainNetMm10,468 chainNetMm10,535 chainNetMm10,552 chainNetMm10,555 chainNetMm10,621 chainNetMm10,626 chainNetMm10,631 chainNetMm10,635 chainNetMm10,646 chainNetMm10,678 chainNetMm10,797 chainNetMm10,811 chainNetMm10,817 chainNetMm10,823 chainNetMm10,827 chainNetMm10,830 chainNetMm10,858 chainNetMm10,1048 chainNetMm10,1072 chainNetMm10,1088 chainNetOryLat2,82 chainNetOryLat2,151 chainNetOryLat2,203 chainNetOryLat2,460 chainNetOryLat2,470 chainNetOryLat2,474 chainNetOryLat2,541 chainNetOryLat2,558 chainNetOryLat2,561 chainNetOryLat2,627 chainNetOryLat2,632 chainNetOryLat2,637 chainNetOryLat2,641 chainNetOryLat2,652 chainNetOryLat2,684 chainNetOryLat2,803 chainNetOryLat2,817 chainNetOryLat2,823 chainNetOryLat2,829 chainNetOryLat2,833 chainNetOryLat2,836 chainNetOryLat2,864 chainNetOryLat2,1054 chainNetOryLat2,1078 chainNetOryLat2,1094 chainOryLat2,79 chainOryLat2,148 chainOryLat2,200 chainOryLat2,457 chainOryLat2,467 chainOryLat2,471 chainOryLat2,538 chainOryLat2,555 chainOryLat2,558 chainOryLat2,624 chainOryLat2,629 chainOryLat2,634 chainOryLat2,638 chainOryLat2,649 chainOryLat2,681 chainOryLat2,800 chainOryLat2,814 chainOryLat2,820 chainOryLat2,826 chainOryLat2,830 chainOryLat2,833 chainOryLat2,861 chainOryLat2,1051 chainOryLat2,1075 chainOryLat2,1091 cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 ensGene,31 gap,47 gap,51 gap,81 gap,86 gap,89 gap,95 gap,98 gaze,34 gaze,59 gaze,80 gc5Base,44 genscan,102 genscan,132 gold,27 gold,122 gold,189 gold,283 microsat,53 microsat,119 mrna,62 mrna,79 mrna,114 mrna,140 mrna,321 mrna,357 mrna,376 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 netDanRer7,75 netDanRer7,144 netDanRer7,196 netDanRer7,451 netDanRer7,461 netDanRer7,465 netDanRer7,532 netDanRer7,549 netDanRer7,552 netDanRer7,618 netDanRer7,623 netDanRer7,628 netDanRer7,632 netDanRer7,643 netDanRer7,675 netDanRer7,794 netDanRer7,808 netDanRer7,814 netDanRer7,820 netDanRer7,824 netDanRer7,827 netDanRer7,855 netDanRer7,1045 netDanRer7,1069 netDanRer7,1085 netFr3,75 netFr3,144 netFr3,196 netFr3,451 netFr3,461 netFr3,465 netFr3,532 netFr3,549 netFr3,552 netFr3,618 netFr3,623 netFr3,628 netFr3,632 netFr3,643 netFr3,675 netFr3,794 netFr3,808 netFr3,814 netFr3,820 netFr3,824 netFr3,827 netFr3,855 netFr3,1045 netFr3,1069 netFr3,1085 netGalGal6,75 netGalGal6,144 netGalGal6,196 netGalGal6,451 netGalGal6,461 netGalGal6,465 netGalGal6,532 netGalGal6,549 netGalGal6,552 netGalGal6,618 netGalGal6,623 netGalGal6,628 netGalGal6,632 netGalGal6,643 netGalGal6,675 netGalGal6,794 netGalGal6,808 netGalGal6,814 netGalGal6,820 netGalGal6,824 netGalGal6,827 netGalGal6,855 netGalGal6,1045 netGalGal6,1069 netGalGal6,1085 netGasAcu1,75 netGasAcu1,144 netGasAcu1,196 netGasAcu1,451 netGasAcu1,461 netGasAcu1,465 netGasAcu1,532 netGasAcu1,549 netGasAcu1,552 netGasAcu1,618 netGasAcu1,623 netGasAcu1,628 netGasAcu1,632 netGasAcu1,643 netGasAcu1,675 netGasAcu1,794 netGasAcu1,808 netGasAcu1,814 netGasAcu1,820 netGasAcu1,824 netGasAcu1,827 netGasAcu1,855 netGasAcu1,1045 netGasAcu1,1069 netGasAcu1,1085 netHg19,75 netHg19,144 netHg19,196 netHg19,451 netHg19,461 netHg19,465 netHg19,532 netHg19,549 netHg19,552 netHg19,618 netHg19,623 netHg19,628 netHg19,632 netHg19,643 netHg19,675 netHg19,794 netHg19,808 netHg19,814 netHg19,820 netHg19,824 netHg19,827 netHg19,855 netHg19,1045 netHg19,1069 netHg19,1085 netMm10,75 netMm10,144 netMm10,196 netMm10,451 netMm10,461 netMm10,465 netMm10,532 netMm10,549 netMm10,552 netMm10,618 netMm10,623 netMm10,628 netMm10,632 netMm10,643 netMm10,675 netMm10,794 netMm10,808 netMm10,814 netMm10,820 netMm10,824 netMm10,827 netMm10,855 netMm10,1045 netMm10,1069 netMm10,1085 netOryLat2,79 netOryLat2,148 netOryLat2,200 netOryLat2,457 netOryLat2,467 netOryLat2,471 netOryLat2,538 netOryLat2,555 netOryLat2,558 netOryLat2,624 netOryLat2,629 netOryLat2,634 netOryLat2,638 netOryLat2,649 netOryLat2,681 netOryLat2,800 netOryLat2,814 netOryLat2,820 netOryLat2,826 netOryLat2,830 netOryLat2,833 netOryLat2,861 netOryLat2,1051 netOryLat2,1075 netOryLat2,1091 simpleRepeat,79 tRNAs,35 tRNAs,59 tRNAs,68 tRNAs,86 tRNAs,120 tRNAs,131 tRNAs,144 tRNAs,253 tRNAs,310 tRNAs,371 tRNAs,445 tRNAs,471 tRNAs,475 tRNAs,491 transMapEnsemblV5,83 transMapEnsemblV5,115 transMapEnsemblV5,205 transMapEnsemblV5,318 transMapEnsemblV5,353 transMapEnsemblV5,397 transMapEnsemblV5,423 transMapEnsemblV5,476 transMapEnsemblV5,546 transMapEnsemblV5,625 transMapEnsemblV5,653 transMapEnsemblV5,712 transMapEstV5,52 transMapEstV5,84 transMapEstV5,174 transMapEstV5,287 transMapEstV5,322 transMapEstV5,366 transMapEstV5,392 transMapEstV5,445 transMapEstV5,515 transMapEstV5,594 transMapEstV5,622 transMapEstV5,681 transMapRefSeqV5,52 transMapRefSeqV5,84 transMapRefSeqV5,174 transMapRefSeqV5,287 transMapRefSeqV5,322 transMapRefSeqV5,366 transMapRefSeqV5,392 transMapRefSeqV5,445 transMapRefSeqV5,515 transMapRefSeqV5,594 transMapRefSeqV5,622 transMapRefSeqV5,681 transMapRnaV5,52 transMapRnaV5,84 transMapRnaV5,174 transMapRnaV5,287 transMapRnaV5,322 transMapRnaV5,366 transMapRnaV5,392 transMapRnaV5,445 transMapRnaV5,515 transMapRnaV5,594 transMapRnaV5,622 transMapRnaV5,681 transMapV5,53 transMapV5,190 transMapV5,280 transMapV5,393 transMapV5,428 transMapV5,472 transMapV5,498 transMapV5,551 transMapV5,621 transMapV5,700 transMapV5,728 transMapV5,787 uniprot,140 uniprot,311 uniprot,418 uniprot,459 uniprot,480 uniprot,490 uniprot,523 uniprot,603 uniprot,622 uniprot,708 uniprot,740 uniprot,759 uniprot,805 uniprot,965 uniprot,976 uniprot,988 uniprot,1001 uniprot,1048 uniprot,1071 uniprot,1152 uniprot,1164 uniprot,1179 uniprot,1217 uniprot,1226 uniprot,1234 uniprot,1239 uniprot,1286 uniprot,1458 uniprot,1599 uniprot,1634 uniprot,1735 uniprot,1779 uniprot,1807 uniprot,1922 uniprot,1949 uniprot,2017 uniprot,2023 uniprot,2032 windowmaskerSdust,91 xenoMrna,107 xenoMrna,136 xenoMrna,153 xenoMrna,188 xenoMrna,214 xenoMrna,395 xenoMrna,430 xenoMrna,450 xenoRefGene,237 xenoRefGene,256 xenoRefGene,326 xenoRefGene,369 a91-114-31-123 chainGasAcu1,668 chainNetGasAcu1,671 netGasAcu1,668 a91-90-25-100 chainDanRer7,668 chainFr3,668 chainGalGal6,668 chainHg19,668 chainMm10,668 chainNetDanRer7,671 chainNetFr3,671 chainNetGalGal6,671 chainNetHg19,671 chainNetMm10,671 chainNetOryLat2,677 chainOryLat2,674 netDanRer7,668 netFr3,668 netGalGal6,668 netHg19,668 netMm10,668 netOryLat2,674 aa unipModif,1 windowmaskerSdust,97 ab augustusGene,3 augustusGene,16 abbreviated chainDanRer7,581 chainFr3,581 chainGalGal6,581 chainGasAcu1,581 chainHg19,581 chainMm10,581 chainNetDanRer7,584 chainNetFr3,584 chainNetGalGal6,584 chainNetGasAcu1,584 chainNetHg19,584 chainNetMm10,584 chainNetOryLat2,590 chainOryLat2,587 netDanRer7,581 netFr3,581 netGalGal6,581 netGasAcu1,581 netHg19,581 netMm10,581 netOryLat2,587 about chainDanRer7,457 chainDanRer7,470 chainDanRer7,844 chainFr3,457 chainFr3,470 chainFr3,844 chainGalGal6,457 chainGalGal6,470 chainGalGal6,844 chainGasAcu1,457 chainGasAcu1,470 chainGasAcu1,844 chainHg19,457 chainHg19,470 chainHg19,844 chainMm10,457 chainMm10,470 chainMm10,844 chainNetDanRer7,460 chainNetDanRer7,473 chainNetDanRer7,847 chainNetFr3,460 chainNetFr3,473 chainNetFr3,847 chainNetGalGal6,460 chainNetGalGal6,473 chainNetGalGal6,847 chainNetGasAcu1,460 chainNetGasAcu1,473 chainNetGasAcu1,847 chainNetHg19,460 chainNetHg19,473 chainNetHg19,847 chainNetMm10,460 chainNetMm10,473 chainNetMm10,847 chainNetOryLat2,466 chainNetOryLat2,479 chainNetOryLat2,853 chainOryLat2,463 chainOryLat2,476 chainOryLat2,850 genscan,127 gold,31 gold,193 gold,251 microsat,98 mrna,338 netDanRer7,457 netDanRer7,470 netDanRer7,844 netFr3,457 netFr3,470 netFr3,844 netGalGal6,457 netGalGal6,470 netGalGal6,844 netGasAcu1,457 netGasAcu1,470 netGasAcu1,844 netHg19,457 netHg19,470 netHg19,844 netMm10,457 netMm10,470 netMm10,844 netOryLat2,463 netOryLat2,476 netOryLat2,850 simpleRepeat,59 transMapEnsemblV5,132 transMapEstV5,101 transMapRefSeqV5,101 transMapRnaV5,101 transMapV5,207 xenoMrna,412 xenoRefGene,176 above chainDanRer7,529 chainDanRer7,541 chainDanRer7,561 chainFr3,529 chainFr3,541 chainFr3,561 chainGalGal6,529 chainGalGal6,541 chainGalGal6,561 chainGasAcu1,529 chainGasAcu1,541 chainGasAcu1,561 chainHg19,529 chainHg19,541 chainHg19,561 chainMm10,529 chainMm10,541 chainMm10,561 chainNetDanRer7,532 chainNetDanRer7,544 chainNetDanRer7,564 chainNetFr3,532 chainNetFr3,544 chainNetFr3,564 chainNetGalGal6,532 chainNetGalGal6,544 chainNetGalGal6,564 chainNetGasAcu1,532 chainNetGasAcu1,544 chainNetGasAcu1,564 chainNetHg19,532 chainNetHg19,544 chainNetHg19,564 chainNetMm10,532 chainNetMm10,544 chainNetMm10,564 chainNetOryLat2,538 chainNetOryLat2,550 chainNetOryLat2,570 chainOryLat2,535 chainOryLat2,547 chainOryLat2,567 nestedRepeats,218 netDanRer7,529 netDanRer7,541 netDanRer7,561 netFr3,529 netFr3,541 netFr3,561 netGalGal6,529 netGalGal6,541 netGalGal6,561 netGasAcu1,529 netGasAcu1,541 netGasAcu1,561 netHg19,529 netHg19,541 netHg19,561 netMm10,529 netMm10,541 netMm10,561 netOryLat2,535 netOryLat2,547 netOryLat2,567 tRNAs,122 uniprot,1525 abundance chainDanRer7,178 chainFr3,178 chainGalGal6,178 chainGasAcu1,178 chainHg19,178 chainMm10,178 chainNetDanRer7,181 chainNetFr3,181 chainNetGalGal6,181 chainNetGasAcu1,181 chainNetHg19,181 chainNetMm10,181 chainNetOryLat2,185 chainOryLat2,182 netDanRer7,178 netFr3,178 netGalGal6,178 netGasAcu1,178 netHg19,178 netMm10,178 netOryLat2,182 acad chainDanRer7,1065 chainFr3,1065 chainGalGal6,1065 chainGasAcu1,1065 chainHg19,1065 chainMm10,1065 chainNetDanRer7,1068 chainNetFr3,1068 chainNetGalGal6,1068 chainNetGasAcu1,1068 chainNetHg19,1068 chainNetMm10,1068 chainNetOryLat2,1074 chainOryLat2,1071 netDanRer7,1065 netFr3,1065 netGalGal6,1065 netGasAcu1,1065 netHg19,1065 netMm10,1065 netOryLat2,1071 acceptor genscan,32 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 ensGene,56 ensGene,100 transMapEnsemblV5,516 transMapEnsemblV5,575 transMapEstV5,485 transMapEstV5,544 transMapRefSeqV5,485 transMapRefSeqV5,544 transMapRnaV5,485 transMapRnaV5,544 transMapV5,591 transMapV5,650 uniprot,896 uniprot,1706 uniprot,1838 accessed transMapEnsemblV5,525 transMapEstV5,494 transMapRefSeqV5,494 transMapRnaV5,494 transMapV5,600 accessing transMapEnsemblV5,568 transMapEstV5,537 transMapRefSeqV5,537 transMapRnaV5,537 transMapV5,643 accession gold,264 xenoRefGene,116 xenoRefGene,128 accession.version-srcuniq.destuniq transMapEnsemblV5,419 transMapEstV5,388 transMapRefSeqV5,388 transMapRnaV5,388 transMapV5,494 accessions transMapEnsemblV5,391 transMapEstV5,360 transMapRefSeqV5,360 transMapRnaV5,360 transMapV5,466 according augustusGene,114 cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 nestedRepeats,183 accordingly tRNAs,281 acgt chainDanRer7,667 chainFr3,667 chainGalGal6,667 chainGasAcu1,667 chainHg19,667 chainMm10,667 chainNetDanRer7,670 chainNetFr3,670 chainNetGalGal6,670 chainNetGasAcu1,670 chainNetHg19,670 chainNetMm10,670 chainNetOryLat2,676 chainOryLat2,673 netDanRer7,667 netFr3,667 netGalGal6,667 netGasAcu1,667 netHg19,667 netMm10,667 netOryLat2,673 acid blastHg18KG,63 unipModif,5 unipMut,4 uniprot,339 uniprot,351 acids blastHg18KG,133 ensGene,196 microsat,126 mrna,434 simpleRepeat,86 tRNAs,382 tRNAs,405 tRNAs,458 tRNAs,501 uniprot,620 uniprot,1998 xenoMrna,503 xenoRefGene,347 xenoRefGene,380 acronym uniprot,546 added chainDanRer7,591 chainFr3,591 chainGalGal6,591 chainGasAcu1,591 chainHg19,591 chainMm10,591 chainNetDanRer7,594 chainNetFr3,594 chainNetGalGal6,594 chainNetGasAcu1,594 chainNetHg19,594 chainNetMm10,594 chainNetOryLat2,600 chainOryLat2,597 nestedRepeats,147 netDanRer7,591 netFr3,591 netGalGal6,591 netGasAcu1,591 netHg19,591 netMm10,591 netOryLat2,597 transMapEnsemblV5,425 transMapEnsemblV5,435 transMapEstV5,394 transMapEstV5,404 transMapRefSeqV5,394 transMapRefSeqV5,404 transMapRnaV5,394 transMapRnaV5,404 transMapV5,500 transMapV5,510 uniprot,1187 additional gold,226 nestedRepeats,288 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 uniprot,1917 advice chainDanRer7,930 chainDanRer7,962 chainFr3,930 chainFr3,962 chainGalGal6,930 chainGalGal6,962 chainGasAcu1,930 chainGasAcu1,962 chainHg19,930 chainHg19,962 chainMm10,930 chainMm10,962 chainNetDanRer7,933 chainNetDanRer7,965 chainNetFr3,933 chainNetFr3,965 chainNetGalGal6,933 chainNetGalGal6,965 chainNetGasAcu1,933 chainNetGasAcu1,965 chainNetHg19,933 chainNetHg19,965 chainNetMm10,933 chainNetMm10,965 chainNetOryLat2,939 chainNetOryLat2,971 chainOryLat2,936 chainOryLat2,968 netDanRer7,930 netDanRer7,962 netFr3,930 netFr3,962 netGalGal6,930 netGalGal6,962 netGasAcu1,930 netGasAcu1,962 netHg19,930 netHg19,962 netMm10,930 netMm10,962 netOryLat2,936 netOryLat2,968 af nestedRepeats,372 nestedRepeats,396 afa nestedRepeats,325 affine chainDanRer7,85 chainFr3,85 chainGalGal6,85 chainGasAcu1,85 chainHg19,85 chainMm10,85 chainNetDanRer7,88 chainNetFr3,88 chainNetGalGal6,88 chainNetGasAcu1,88 chainNetHg19,88 chainNetMm10,88 chainNetOryLat2,92 chainOryLat2,89 netDanRer7,85 netFr3,85 netGalGal6,85 netGasAcu1,85 netHg19,85 netMm10,85 netOryLat2,89 after chainDanRer7,902 chainFr3,902 chainGalGal6,902 chainGasAcu1,902 chainHg19,902 chainMm10,902 chainNetDanRer7,905 chainNetFr3,905 chainNetGalGal6,905 chainNetGasAcu1,905 chainNetHg19,905 chainNetMm10,905 chainNetOryLat2,911 chainOryLat2,908 cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 netDanRer7,902 netFr3,902 netGalGal6,902 netGasAcu1,902 netHg19,902 netMm10,902 netOryLat2,908 uniprot,294 uniprot,1329 again transMapEnsemblV5,407 transMapEstV5,376 transMapRefSeqV5,376 transMapRnaV5,376 transMapV5,482 uniprot,629 uniprot,1500 against mrna,331 mrna,349 transMapEnsemblV5,125 transMapEstV5,94 transMapRefSeqV5,94 transMapRnaV5,94 transMapV5,200 xenoMrna,405 xenoMrna,422 xenoRefGene,220 agarwala windowmaskerSdust,98 agp gap,191 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 aka gold,69 al cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 ensGene,46 ensGene,189 transMapEnsemblV5,733 transMapEstV5,702 transMapRefSeqV5,702 transMapRnaV5,702 transMapV5,808 xenoRefGene,338 alejo uniprot,1966 algorithm augustusGene,130 tRNAs,40 transMapEnsemblV5,28 transMapEstV5,26 transMapRefSeqV5,26 transMapRnaV5,26 transMapV5,25 algorithms uniprot,52 align chainDanRer7,194 chainFr3,194 chainGalGal6,194 chainGasAcu1,194 chainHg19,194 chainMm10,194 chainNetDanRer7,197 chainNetFr3,197 chainNetGalGal6,197 chainNetGasAcu1,197 chainNetHg19,197 chainNetMm10,197 chainNetOryLat2,201 chainOryLat2,198 netDanRer7,194 netFr3,194 netGalGal6,194 netGasAcu1,194 netHg19,194 netMm10,194 netOryLat2,198 uniprot,1216 alignable chainDanRer7,22 chainDanRer7,38 chainFr3,22 chainFr3,38 chainGalGal6,22 chainGalGal6,38 chainGasAcu1,22 chainGasAcu1,38 chainHg19,22 chainHg19,38 chainMm10,22 chainMm10,38 chainNetDanRer7,25 chainNetDanRer7,41 chainNetFr3,25 chainNetFr3,41 chainNetGalGal6,25 chainNetGalGal6,41 chainNetGasAcu1,25 chainNetGasAcu1,41 chainNetHg19,25 chainNetHg19,41 chainNetMm10,25 chainNetMm10,41 chainNetOryLat2,27 chainNetOryLat2,43 chainOryLat2,24 chainOryLat2,40 netDanRer7,22 netDanRer7,38 netFr3,22 netFr3,38 netGalGal6,22 netGalGal6,38 netGasAcu1,22 netGasAcu1,38 netHg19,22 netHg19,38 netMm10,22 netMm10,38 netOryLat2,24 netOryLat2,40 aligned blastHg18KG,47 blastHg18KG,71 chainDanRer7,584 chainFr3,584 chainGalGal6,584 chainGasAcu1,584 chainHg19,584 chainMm10,584 chainNetDanRer7,587 chainNetFr3,587 chainNetGalGal6,587 chainNetGasAcu1,587 chainNetHg19,587 chainNetMm10,587 chainNetOryLat2,593 chainOryLat2,590 mrna,348 mrna,360 netDanRer7,584 netFr3,584 netGalGal6,584 netGasAcu1,584 netHg19,584 netMm10,584 netOryLat2,590 transMapV5,116 uniprot,783 uniprot,973 uniprot,1007 uniprot,1246 uniprot,1335 uniprot,1472 xenoMrna,421 xenoMrna,433 xenoRefGene,219 xenoRefGene,240 aligning chainDanRer7,133 chainDanRer7,329 chainDanRer7,359 chainFr3,133 chainFr3,329 chainFr3,359 chainGalGal6,133 chainGalGal6,329 chainGalGal6,359 chainGasAcu1,133 chainGasAcu1,329 chainGasAcu1,359 chainHg19,133 chainHg19,329 chainHg19,359 chainMm10,133 chainMm10,329 chainMm10,359 chainNetDanRer7,136 chainNetDanRer7,332 chainNetDanRer7,362 chainNetFr3,136 chainNetFr3,332 chainNetFr3,362 chainNetGalGal6,136 chainNetGalGal6,332 chainNetGalGal6,362 chainNetGasAcu1,136 chainNetGasAcu1,332 chainNetGasAcu1,362 chainNetHg19,136 chainNetHg19,332 chainNetHg19,362 chainNetMm10,136 chainNetMm10,332 chainNetMm10,362 chainNetOryLat2,140 chainNetOryLat2,338 chainNetOryLat2,368 chainOryLat2,137 chainOryLat2,335 chainOryLat2,365 netDanRer7,133 netDanRer7,329 netDanRer7,359 netFr3,133 netFr3,329 netFr3,359 netGalGal6,133 netGalGal6,329 netGalGal6,359 netGasAcu1,133 netGasAcu1,329 netGasAcu1,359 netHg19,133 netHg19,329 netHg19,359 netMm10,133 netMm10,329 netMm10,359 netOryLat2,137 netOryLat2,335 netOryLat2,365 uniprot,952 alignment blastHg18KG,165 chainDanRer7,257 chainDanRer7,1012 chainFr3,257 chainFr3,1012 chainGalGal6,257 chainGalGal6,1012 chainGasAcu1,257 chainGasAcu1,1012 chainHg19,257 chainHg19,1012 chainMm10,257 chainMm10,1012 chainNetDanRer7,260 chainNetDanRer7,1015 chainNetFr3,260 chainNetFr3,1015 chainNetGalGal6,260 chainNetGalGal6,1015 chainNetGasAcu1,260 chainNetGasAcu1,1015 chainNetHg19,260 chainNetHg19,1015 chainNetMm10,260 chainNetMm10,1015 chainNetOryLat2,264 chainNetOryLat2,1021 chainOryLat2,261 chainOryLat2,1018 mrna,37 mrna,365 mrna,452 netDanRer7,8 netDanRer7,257 netDanRer7,1012 netFr3,8 netFr3,257 netFr3,1012 netGalGal6,8 netGalGal6,257 netGalGal6,1012 netGasAcu1,8 netGasAcu1,257 netGasAcu1,1012 netHg19,8 netHg19,257 netHg19,1012 netMm10,8 netMm10,257 netMm10,1012 netOryLat2,10 netOryLat2,261 netOryLat2,1018 transMapEnsemblV5,27 transMapEnsemblV5,79 transMapEnsemblV5,103 transMapEnsemblV5,140 transMapEnsemblV5,196 transMapEnsemblV5,209 transMapEnsemblV5,387 transMapEnsemblV5,430 transMapEstV5,25 transMapEstV5,48 transMapEstV5,72 transMapEstV5,109 transMapEstV5,165 transMapEstV5,178 transMapEstV5,356 transMapEstV5,399 transMapRefSeqV5,25 transMapRefSeqV5,48 transMapRefSeqV5,72 transMapRefSeqV5,109 transMapRefSeqV5,165 transMapRefSeqV5,178 transMapRefSeqV5,356 transMapRefSeqV5,399 transMapRnaV5,25 transMapRnaV5,48 transMapRnaV5,72 transMapRnaV5,109 transMapRnaV5,165 transMapRnaV5,178 transMapRnaV5,356 transMapRnaV5,399 transMapV5,24 transMapV5,49 transMapV5,178 transMapV5,215 transMapV5,271 transMapV5,284 transMapV5,462 transMapV5,505 unipAliSwissprot,4 unipAliTrembl,4 uniprot,108 uniprot,135 uniprot,191 uniprot,807 uniprot,914 uniprot,1175 uniprot,1429 uniprot,1523 uniprot,1620 uniprot,1629 uniprot,1636 uniprot,1642 uniprot,1704 uniprot,1862 xenoMrna,41 xenoMrna,438 xenoMrna,521 xenoRefGene,229 xenoRefGene,245 xenoRefGene,304 alignments augustusGene,300 blastHg18KG,18 chainDanRer7,9 chainDanRer7,63 chainDanRer7,444 chainDanRer7,596 chainDanRer7,608 chainDanRer7,616 chainDanRer7,642 chainDanRer7,760 chainDanRer7,1032 chainDanRer7,1097 chainFr3,9 chainFr3,63 chainFr3,444 chainFr3,596 chainFr3,608 chainFr3,616 chainFr3,642 chainFr3,760 chainFr3,1032 chainFr3,1097 chainGalGal6,9 chainGalGal6,63 chainGalGal6,444 chainGalGal6,596 chainGalGal6,608 chainGalGal6,616 chainGalGal6,642 chainGalGal6,760 chainGalGal6,1032 chainGalGal6,1097 chainGasAcu1,9 chainGasAcu1,63 chainGasAcu1,444 chainGasAcu1,596 chainGasAcu1,608 chainGasAcu1,616 chainGasAcu1,642 chainGasAcu1,760 chainGasAcu1,1032 chainGasAcu1,1097 chainHg19,9 chainHg19,63 chainHg19,444 chainHg19,596 chainHg19,608 chainHg19,616 chainHg19,642 chainHg19,760 chainHg19,1032 chainHg19,1097 chainMm10,9 chainMm10,63 chainMm10,444 chainMm10,596 chainMm10,608 chainMm10,616 chainMm10,642 chainMm10,760 chainMm10,1032 chainMm10,1097 chainNetDanRer7,12 chainNetDanRer7,66 chainNetDanRer7,447 chainNetDanRer7,599 chainNetDanRer7,611 chainNetDanRer7,619 chainNetDanRer7,645 chainNetDanRer7,763 chainNetDanRer7,1035 chainNetDanRer7,1100 chainNetDanRer7Viewchain,10 chainNetDanRer7Viewnet,10 chainNetFr3,12 chainNetFr3,66 chainNetFr3,447 chainNetFr3,599 chainNetFr3,611 chainNetFr3,619 chainNetFr3,645 chainNetFr3,763 chainNetFr3,1035 chainNetFr3,1100 chainNetFr3Viewchain,10 chainNetFr3Viewnet,10 chainNetGalGal6,12 chainNetGalGal6,66 chainNetGalGal6,447 chainNetGalGal6,599 chainNetGalGal6,611 chainNetGalGal6,619 chainNetGalGal6,645 chainNetGalGal6,763 chainNetGalGal6,1035 chainNetGalGal6,1100 chainNetGalGal6Viewchain,10 chainNetGalGal6Viewnet,10 chainNetGasAcu1,12 chainNetGasAcu1,66 chainNetGasAcu1,447 chainNetGasAcu1,599 chainNetGasAcu1,611 chainNetGasAcu1,619 chainNetGasAcu1,645 chainNetGasAcu1,763 chainNetGasAcu1,1035 chainNetGasAcu1,1100 chainNetGasAcu1Viewchain,10 chainNetGasAcu1Viewnet,10 chainNetHg19,12 chainNetHg19,66 chainNetHg19,447 chainNetHg19,599 chainNetHg19,611 chainNetHg19,619 chainNetHg19,645 chainNetHg19,763 chainNetHg19,1035 chainNetHg19,1100 chainNetHg19Viewchain,10 chainNetHg19Viewnet,10 chainNetMm10,12 chainNetMm10,66 chainNetMm10,447 chainNetMm10,599 chainNetMm10,611 chainNetMm10,619 chainNetMm10,645 chainNetMm10,763 chainNetMm10,1035 chainNetMm10,1100 chainNetMm10Viewchain,10 chainNetMm10Viewnet,10 chainNetOryLat2,14 chainNetOryLat2,68 chainNetOryLat2,453 chainNetOryLat2,605 chainNetOryLat2,617 chainNetOryLat2,625 chainNetOryLat2,651 chainNetOryLat2,769 chainNetOryLat2,1041 chainNetOryLat2,1106 chainNetOryLat2Viewchain,12 chainNetOryLat2Viewnet,12 chainOryLat2,11 chainOryLat2,65 chainOryLat2,450 chainOryLat2,602 chainOryLat2,614 chainOryLat2,622 chainOryLat2,648 chainOryLat2,766 chainOryLat2,1038 chainOryLat2,1103 mrna,16 mrna,374 netDanRer7,63 netDanRer7,444 netDanRer7,596 netDanRer7,608 netDanRer7,616 netDanRer7,642 netDanRer7,760 netDanRer7,1032 netDanRer7,1097 netFr3,63 netFr3,444 netFr3,596 netFr3,608 netFr3,616 netFr3,642 netFr3,760 netFr3,1032 netFr3,1097 netGalGal6,63 netGalGal6,444 netGalGal6,596 netGalGal6,608 netGalGal6,616 netGalGal6,642 netGalGal6,760 netGalGal6,1032 netGalGal6,1097 netGasAcu1,63 netGasAcu1,444 netGasAcu1,596 netGasAcu1,608 netGasAcu1,616 netGasAcu1,642 netGasAcu1,760 netGasAcu1,1032 netGasAcu1,1097 netHg19,63 netHg19,444 netHg19,596 netHg19,608 netHg19,616 netHg19,642 netHg19,760 netHg19,1032 netHg19,1097 netMm10,63 netMm10,444 netMm10,596 netMm10,608 netMm10,616 netMm10,642 netMm10,760 netMm10,1032 netMm10,1097 netOryLat2,65 netOryLat2,450 netOryLat2,602 netOryLat2,614 netOryLat2,622 netOryLat2,648 netOryLat2,766 netOryLat2,1038 netOryLat2,1103 tRNAs,241 transMapEnsemblV5,21 transMapEnsemblV5,72 transMapEnsemblV5,154 transMapEnsemblV5,167 transMapEnsemblV5,325 transMapEnsemblV5,337 transMapEnsemblV5,347 transMapEnsemblV5,370 transMapEnsemblV5,441 transMapEnsemblV5,453 transMapEnsemblV5,768 transMapEstV5,19 transMapEstV5,41 transMapEstV5,123 transMapEstV5,136 transMapEstV5,294 transMapEstV5,306 transMapEstV5,316 transMapEstV5,339 transMapEstV5,410 transMapEstV5,422 transMapEstV5,737 transMapRefSeqV5,19 transMapRefSeqV5,41 transMapRefSeqV5,123 transMapRefSeqV5,136 transMapRefSeqV5,294 transMapRefSeqV5,306 transMapRefSeqV5,316 transMapRefSeqV5,339 transMapRefSeqV5,410 transMapRefSeqV5,422 transMapRefSeqV5,737 transMapRnaV5,19 transMapRnaV5,41 transMapRnaV5,123 transMapRnaV5,136 transMapRnaV5,294 transMapRnaV5,306 transMapRnaV5,316 transMapRnaV5,339 transMapRnaV5,410 transMapRnaV5,422 transMapRnaV5,737 transMapV5,4 transMapV5,18 transMapV5,40 transMapV5,67 transMapV5,85 transMapV5,127 transMapV5,140 transMapV5,229 transMapV5,242 transMapV5,400 transMapV5,412 transMapV5,422 transMapV5,445 transMapV5,516 transMapV5,528 transMapV5,843 uniprot,82 uniprot,100 uniprot,637 uniprot,793 uniprot,814 uniprot,876 uniprot,1138 uniprot,1148 uniprot,1161 uniprot,1309 uniprot,1410 uniprot,1487 xenoMrna,16 xenoMrna,448 xenoRefGene,254 aligns transMapV5,162 all augustusGene,207 chainDanRer7,615 chainFr3,615 chainGalGal6,615 chainGasAcu1,615 chainHg19,615 chainMm10,615 chainNetDanRer7,618 chainNetFr3,618 chainNetGalGal6,618 chainNetGasAcu1,618 chainNetHg19,618 chainNetMm10,618 chainNetOryLat2,624 chainOryLat2,621 cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 gold,161 mrna,136 mrna,190 mrna,234 nestedRepeats,138 nestedRepeats,170 netDanRer7,615 netFr3,615 netGalGal6,615 netGasAcu1,615 netHg19,615 netMm10,615 netOryLat2,621 tRNAs,215 transMapEnsemblV5,190 transMapEstV5,159 transMapRefSeqV5,159 transMapRnaV5,159 transMapV5,265 uniprot,89 uniprot,121 uniprot,204 uniprot,395 uniprot,956 uniprot,1107 uniprot,1167 uniprot,1311 uniprot,1337 uniprot,1343 uniprot,1418 uniprot,1542 uniprot,1685 uniprot,1979 xenoMrna,210 xenoMrna,264 xenoMrna,308 allows augustusGene,168 chainDanRer7,80 chainFr3,80 chainGalGal6,80 chainGasAcu1,80 chainHg19,80 chainMm10,80 chainNetDanRer7,83 chainNetFr3,83 chainNetGalGal6,83 chainNetGasAcu1,83 chainNetHg19,83 chainNetMm10,83 chainNetOryLat2,87 chainOryLat2,84 mrna,324 netDanRer7,80 netFr3,80 netGalGal6,80 netGasAcu1,80 netHg19,80 netMm10,80 netOryLat2,84 transMapEnsemblV5,118 transMapEnsemblV5,287 transMapEstV5,87 transMapEstV5,256 transMapRefSeqV5,87 transMapRefSeqV5,256 transMapRnaV5,87 transMapRnaV5,256 transMapV5,193 transMapV5,362 xenoMrna,398 xenoRefGene,147 aln unipAliSwissprot,2 unipAliTrembl,2 alone augustusGene,33 along transMapEnsemblV5,181 transMapEstV5,150 transMapRefSeqV5,150 transMapRnaV5,150 transMapV5,256 already chainDanRer7,805 chainFr3,805 chainGalGal6,805 chainGasAcu1,805 chainHg19,805 chainMm10,805 chainNetDanRer7,808 chainNetFr3,808 chainNetGalGal6,808 chainNetGasAcu1,808 chainNetHg19,808 chainNetMm10,808 chainNetOryLat2,814 chainOryLat2,811 netDanRer7,805 netFr3,805 netGalGal6,805 netGasAcu1,805 netHg19,805 netMm10,805 netOryLat2,811 also blastHg18KG,135 chainDanRer7,91 chainFr3,91 chainGalGal6,91 chainGasAcu1,91 chainHg19,91 chainMm10,91 chainNetDanRer7,94 chainNetFr3,94 chainNetGalGal6,94 chainNetGasAcu1,94 chainNetHg19,94 chainNetMm10,94 chainNetOryLat2,98 chainOryLat2,95 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 ensGene,48 mrna,206 mrna,314 netDanRer7,91 netFr3,91 netGalGal6,91 netGasAcu1,91 netHg19,91 netMm10,91 netOryLat2,95 transMapEnsemblV5,108 transMapEnsemblV5,143 transMapEnsemblV5,645 transMapEstV5,77 transMapEstV5,112 transMapEstV5,614 transMapRefSeqV5,77 transMapRefSeqV5,112 transMapRefSeqV5,614 transMapRnaV5,77 transMapRnaV5,112 transMapRnaV5,614 transMapV5,183 transMapV5,218 transMapV5,720 uniprot,666 uniprot,706 uniprot,1799 xenoMrna,280 xenoMrna,388 alt uniprot,850 alter mrna,73 xenoMrna,147 alternating gold,87 alternative augustusGene,122 unipAliSwissprot,16 uniprot,163 uniprot,670 alternatives-from-sampling augustusGene,131 although tRNAs,133 altschul blastHg18KG,153 always uniprot,503 uniprot,960 uniprot,1411 uniprot,1579 xenoMrna,85 amino blastHg18KG,62 blastHg18KG,132 unipModif,4 unipMut,3 uniprot,338 uniprot,350 uniprot,619 amsterdam genscan,201 an blastHg18KG,89 chainDanRer7,151 chainDanRer7,177 chainDanRer7,183 chainFr3,151 chainFr3,177 chainFr3,183 chainGalGal6,151 chainGalGal6,177 chainGalGal6,183 chainGasAcu1,151 chainGasAcu1,177 chainGasAcu1,183 chainHg19,151 chainHg19,177 chainHg19,183 chainMm10,151 chainMm10,177 chainMm10,183 chainNetDanRer7,154 chainNetDanRer7,180 chainNetDanRer7,186 chainNetFr3,154 chainNetFr3,180 chainNetFr3,186 chainNetGalGal6,154 chainNetGalGal6,180 chainNetGalGal6,186 chainNetGasAcu1,154 chainNetGasAcu1,180 chainNetGasAcu1,186 chainNetHg19,154 chainNetHg19,180 chainNetHg19,186 chainNetMm10,154 chainNetMm10,180 chainNetMm10,186 chainNetOryLat2,158 chainNetOryLat2,184 chainNetOryLat2,190 chainOryLat2,155 chainOryLat2,181 chainOryLat2,187 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 gc5Base,65 nestedRepeats,196 nestedRepeats,347 netDanRer7,151 netDanRer7,177 netDanRer7,183 netFr3,151 netFr3,177 netFr3,183 netGalGal6,151 netGalGal6,177 netGalGal6,183 netGasAcu1,151 netGasAcu1,177 netGasAcu1,183 netHg19,151 netHg19,177 netHg19,183 netMm10,151 netMm10,177 netMm10,183 netOryLat2,155 netOryLat2,181 netOryLat2,187 tRNAs,26 tRNAs,34 tRNAs,46 uniprot,765 uniprot,899 uniprot,1203 uniprot,1467 uniprot,1568 xenoRefGene,141 xenoRefGene,228 xenoRefGene,340 analysis tRNAs,400 tRNAs,495 transMapEnsemblV5,537 transMapEstV5,506 transMapRefSeqV5,506 transMapRnaV5,506 transMapV5,612 uniprot,1648 uniprot,1728 analyze microsat,122 simpleRepeat,82 and augustusGene,9 augustusGene,60 augustusGene,74 augustusGene,87 augustusGene,206 augustusGene,271 augustusGene,277 augustusGene,296 augustusGene,327 blastHg18KG,10 blastHg18KG,25 blastHg18KG,123 chainDanRer7,97 chainDanRer7,111 chainDanRer7,225 chainDanRer7,233 chainDanRer7,247 chainDanRer7,285 chainDanRer7,307 chainDanRer7,433 chainDanRer7,587 chainDanRer7,622 chainDanRer7,630 chainDanRer7,771 chainDanRer7,849 chainDanRer7,881 chainDanRer7,892 chainDanRer7,901 chainDanRer7,926 chainDanRer7,941 chainDanRer7,966 chainDanRer7,972 chainDanRer7,978 chainDanRer7,985 chainDanRer7,991 chainDanRer7,1055 chainDanRer7,1060 chainFr3,97 chainFr3,111 chainFr3,225 chainFr3,233 chainFr3,247 chainFr3,285 chainFr3,307 chainFr3,433 chainFr3,587 chainFr3,622 chainFr3,630 chainFr3,771 chainFr3,849 chainFr3,881 chainFr3,892 chainFr3,901 chainFr3,926 chainFr3,941 chainFr3,966 chainFr3,972 chainFr3,978 chainFr3,985 chainFr3,991 chainFr3,1055 chainFr3,1060 chainGalGal6,97 chainGalGal6,111 chainGalGal6,225 chainGalGal6,233 chainGalGal6,247 chainGalGal6,285 chainGalGal6,307 chainGalGal6,433 chainGalGal6,587 chainGalGal6,622 chainGalGal6,630 chainGalGal6,771 chainGalGal6,849 chainGalGal6,881 chainGalGal6,892 chainGalGal6,901 chainGalGal6,926 chainGalGal6,941 chainGalGal6,966 chainGalGal6,972 chainGalGal6,978 chainGalGal6,985 chainGalGal6,991 chainGalGal6,1055 chainGalGal6,1060 chainGasAcu1,97 chainGasAcu1,111 chainGasAcu1,225 chainGasAcu1,233 chainGasAcu1,247 chainGasAcu1,285 chainGasAcu1,307 chainGasAcu1,433 chainGasAcu1,587 chainGasAcu1,622 chainGasAcu1,630 chainGasAcu1,771 chainGasAcu1,849 chainGasAcu1,881 chainGasAcu1,892 chainGasAcu1,901 chainGasAcu1,926 chainGasAcu1,941 chainGasAcu1,966 chainGasAcu1,972 chainGasAcu1,978 chainGasAcu1,985 chainGasAcu1,991 chainGasAcu1,1055 chainGasAcu1,1060 chainHg19,97 chainHg19,111 chainHg19,225 chainHg19,233 chainHg19,247 chainHg19,285 chainHg19,307 chainHg19,433 chainHg19,587 chainHg19,622 chainHg19,630 chainHg19,771 chainHg19,849 chainHg19,881 chainHg19,892 chainHg19,901 chainHg19,926 chainHg19,941 chainHg19,966 chainHg19,972 chainHg19,978 chainHg19,985 chainHg19,991 chainHg19,1055 chainHg19,1060 chainMm10,97 chainMm10,111 chainMm10,225 chainMm10,233 chainMm10,247 chainMm10,285 chainMm10,307 chainMm10,433 chainMm10,587 chainMm10,622 chainMm10,630 chainMm10,771 chainMm10,849 chainMm10,881 chainMm10,892 chainMm10,901 chainMm10,926 chainMm10,941 chainMm10,966 chainMm10,972 chainMm10,978 chainMm10,985 chainMm10,991 chainMm10,1055 chainMm10,1060 chainNetDanRer7,10 chainNetDanRer7,100 chainNetDanRer7,114 chainNetDanRer7,228 chainNetDanRer7,236 chainNetDanRer7,250 chainNetDanRer7,288 chainNetDanRer7,310 chainNetDanRer7,436 chainNetDanRer7,590 chainNetDanRer7,625 chainNetDanRer7,633 chainNetDanRer7,774 chainNetDanRer7,852 chainNetDanRer7,884 chainNetDanRer7,895 chainNetDanRer7,904 chainNetDanRer7,929 chainNetDanRer7,944 chainNetDanRer7,969 chainNetDanRer7,975 chainNetDanRer7,981 chainNetDanRer7,988 chainNetDanRer7,994 chainNetDanRer7,1058 chainNetDanRer7,1063 chainNetDanRer7Viewchain,8 chainNetDanRer7Viewnet,8 chainNetFr3,10 chainNetFr3,100 chainNetFr3,114 chainNetFr3,228 chainNetFr3,236 chainNetFr3,250 chainNetFr3,288 chainNetFr3,310 chainNetFr3,436 chainNetFr3,590 chainNetFr3,625 chainNetFr3,633 chainNetFr3,774 chainNetFr3,852 chainNetFr3,884 chainNetFr3,895 chainNetFr3,904 chainNetFr3,929 chainNetFr3,944 chainNetFr3,969 chainNetFr3,975 chainNetFr3,981 chainNetFr3,988 chainNetFr3,994 chainNetFr3,1058 chainNetFr3,1063 chainNetFr3Viewchain,8 chainNetFr3Viewnet,8 chainNetGalGal6,10 chainNetGalGal6,100 chainNetGalGal6,114 chainNetGalGal6,228 chainNetGalGal6,236 chainNetGalGal6,250 chainNetGalGal6,288 chainNetGalGal6,310 chainNetGalGal6,436 chainNetGalGal6,590 chainNetGalGal6,625 chainNetGalGal6,633 chainNetGalGal6,774 chainNetGalGal6,852 chainNetGalGal6,884 chainNetGalGal6,895 chainNetGalGal6,904 chainNetGalGal6,929 chainNetGalGal6,944 chainNetGalGal6,969 chainNetGalGal6,975 chainNetGalGal6,981 chainNetGalGal6,988 chainNetGalGal6,994 chainNetGalGal6,1058 chainNetGalGal6,1063 chainNetGalGal6Viewchain,8 chainNetGalGal6Viewnet,8 chainNetGasAcu1,10 chainNetGasAcu1,100 chainNetGasAcu1,114 chainNetGasAcu1,228 chainNetGasAcu1,236 chainNetGasAcu1,250 chainNetGasAcu1,288 chainNetGasAcu1,310 chainNetGasAcu1,436 chainNetGasAcu1,590 chainNetGasAcu1,625 chainNetGasAcu1,633 chainNetGasAcu1,774 chainNetGasAcu1,852 chainNetGasAcu1,884 chainNetGasAcu1,895 chainNetGasAcu1,904 chainNetGasAcu1,929 chainNetGasAcu1,944 chainNetGasAcu1,969 chainNetGasAcu1,975 chainNetGasAcu1,981 chainNetGasAcu1,988 chainNetGasAcu1,994 chainNetGasAcu1,1058 chainNetGasAcu1,1063 chainNetGasAcu1Viewchain,8 chainNetGasAcu1Viewnet,8 chainNetHg19,10 chainNetHg19,100 chainNetHg19,114 chainNetHg19,228 chainNetHg19,236 chainNetHg19,250 chainNetHg19,288 chainNetHg19,310 chainNetHg19,436 chainNetHg19,590 chainNetHg19,625 chainNetHg19,633 chainNetHg19,774 chainNetHg19,852 chainNetHg19,884 chainNetHg19,895 chainNetHg19,904 chainNetHg19,929 chainNetHg19,944 chainNetHg19,969 chainNetHg19,975 chainNetHg19,981 chainNetHg19,988 chainNetHg19,994 chainNetHg19,1058 chainNetHg19,1063 chainNetHg19Viewchain,8 chainNetHg19Viewnet,8 chainNetMm10,10 chainNetMm10,100 chainNetMm10,114 chainNetMm10,228 chainNetMm10,236 chainNetMm10,250 chainNetMm10,288 chainNetMm10,310 chainNetMm10,436 chainNetMm10,590 chainNetMm10,625 chainNetMm10,633 chainNetMm10,774 chainNetMm10,852 chainNetMm10,884 chainNetMm10,895 chainNetMm10,904 chainNetMm10,929 chainNetMm10,944 chainNetMm10,969 chainNetMm10,975 chainNetMm10,981 chainNetMm10,988 chainNetMm10,994 chainNetMm10,1058 chainNetMm10,1063 chainNetMm10Viewchain,8 chainNetMm10Viewnet,8 chainNetOryLat2,12 chainNetOryLat2,104 chainNetOryLat2,118 chainNetOryLat2,232 chainNetOryLat2,240 chainNetOryLat2,254 chainNetOryLat2,292 chainNetOryLat2,316 chainNetOryLat2,442 chainNetOryLat2,596 chainNetOryLat2,631 chainNetOryLat2,639 chainNetOryLat2,780 chainNetOryLat2,858 chainNetOryLat2,890 chainNetOryLat2,901 chainNetOryLat2,910 chainNetOryLat2,935 chainNetOryLat2,950 chainNetOryLat2,975 chainNetOryLat2,981 chainNetOryLat2,987 chainNetOryLat2,994 chainNetOryLat2,1000 chainNetOryLat2,1064 chainNetOryLat2,1069 chainNetOryLat2Viewchain,10 chainNetOryLat2Viewnet,10 chainOryLat2,101 chainOryLat2,115 chainOryLat2,229 chainOryLat2,237 chainOryLat2,251 chainOryLat2,289 chainOryLat2,313 chainOryLat2,439 chainOryLat2,593 chainOryLat2,628 chainOryLat2,636 chainOryLat2,777 chainOryLat2,855 chainOryLat2,887 chainOryLat2,898 chainOryLat2,907 chainOryLat2,932 chainOryLat2,947 chainOryLat2,972 chainOryLat2,978 chainOryLat2,984 chainOryLat2,991 chainOryLat2,997 chainOryLat2,1061 chainOryLat2,1066 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 cytoBandIdeo,8 ensGene,6 ensGene,128 gap,5 gap,28 gap,50 gap,103 gaze,8 gaze,48 gaze,52 gaze,54 gaze,65 gc5Base,9 gc5Base,22 gc5Base,74 genscan,7 genscan,30 genscan,40 genscan,46 genscan,63 genscan,83 genscan,97 genscan,108 genscan,119 genscan,138 genscan,147 gold,6 gold,33 gold,43 gold,89 gold,104 gold,111 gold,146 gold,152 gold,158 gold,205 gold,218 gold,234 gold,287 gold,299 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 mrna,8 mrna,22 mrna,27 mrna,76 mrna,226 mrna,385 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 netDanRer7,97 netDanRer7,111 netDanRer7,225 netDanRer7,233 netDanRer7,247 netDanRer7,285 netDanRer7,307 netDanRer7,433 netDanRer7,587 netDanRer7,622 netDanRer7,630 netDanRer7,771 netDanRer7,849 netDanRer7,881 netDanRer7,892 netDanRer7,901 netDanRer7,926 netDanRer7,941 netDanRer7,966 netDanRer7,972 netDanRer7,978 netDanRer7,985 netDanRer7,991 netDanRer7,1055 netDanRer7,1060 netFr3,97 netFr3,111 netFr3,225 netFr3,233 netFr3,247 netFr3,285 netFr3,307 netFr3,433 netFr3,587 netFr3,622 netFr3,630 netFr3,771 netFr3,849 netFr3,881 netFr3,892 netFr3,901 netFr3,926 netFr3,941 netFr3,966 netFr3,972 netFr3,978 netFr3,985 netFr3,991 netFr3,1055 netFr3,1060 netGalGal6,97 netGalGal6,111 netGalGal6,225 netGalGal6,233 netGalGal6,247 netGalGal6,285 netGalGal6,307 netGalGal6,433 netGalGal6,587 netGalGal6,622 netGalGal6,630 netGalGal6,771 netGalGal6,849 netGalGal6,881 netGalGal6,892 netGalGal6,901 netGalGal6,926 netGalGal6,941 netGalGal6,966 netGalGal6,972 netGalGal6,978 netGalGal6,985 netGalGal6,991 netGalGal6,1055 netGalGal6,1060 netGasAcu1,97 netGasAcu1,111 netGasAcu1,225 netGasAcu1,233 netGasAcu1,247 netGasAcu1,285 netGasAcu1,307 netGasAcu1,433 netGasAcu1,587 netGasAcu1,622 netGasAcu1,630 netGasAcu1,771 netGasAcu1,849 netGasAcu1,881 netGasAcu1,892 netGasAcu1,901 netGasAcu1,926 netGasAcu1,941 netGasAcu1,966 netGasAcu1,972 netGasAcu1,978 netGasAcu1,985 netGasAcu1,991 netGasAcu1,1055 netGasAcu1,1060 netHg19,97 netHg19,111 netHg19,225 netHg19,233 netHg19,247 netHg19,285 netHg19,307 netHg19,433 netHg19,587 netHg19,622 netHg19,630 netHg19,771 netHg19,849 netHg19,881 netHg19,892 netHg19,901 netHg19,926 netHg19,941 netHg19,966 netHg19,972 netHg19,978 netHg19,985 netHg19,991 netHg19,1055 netHg19,1060 netMm10,97 netMm10,111 netMm10,225 netMm10,233 netMm10,247 netMm10,285 netMm10,307 netMm10,433 netMm10,587 netMm10,622 netMm10,630 netMm10,771 netMm10,849 netMm10,881 netMm10,892 netMm10,901 netMm10,926 netMm10,941 netMm10,966 netMm10,972 netMm10,978 netMm10,985 netMm10,991 netMm10,1055 netMm10,1060 netOryLat2,101 netOryLat2,115 netOryLat2,229 netOryLat2,237 netOryLat2,251 netOryLat2,289 netOryLat2,313 netOryLat2,439 netOryLat2,593 netOryLat2,628 netOryLat2,636 netOryLat2,777 netOryLat2,855 netOryLat2,887 netOryLat2,898 netOryLat2,907 netOryLat2,932 netOryLat2,947 netOryLat2,972 netOryLat2,978 netOryLat2,984 netOryLat2,991 netOryLat2,997 netOryLat2,1061 netOryLat2,1066 simpleRepeat,9 simpleRepeat,42 tRNAs,10 tRNAs,33 tRNAs,75 tRNAs,103 tRNAs,175 tRNAs,209 tRNAs,316 tRNAs,331 transMapEnsemblV5,5 transMapEnsemblV5,11 transMapEnsemblV5,43 transMapEnsemblV5,93 transMapEnsemblV5,173 transMapEnsemblV5,198 transMapEnsemblV5,363 transMapEnsemblV5,365 transMapEnsemblV5,389 transMapEnsemblV5,406 transMapEnsemblV5,432 transMapEnsemblV5,463 transMapEnsemblV5,479 transMapEnsemblV5,494 transMapEnsemblV5,551 transMapEnsemblV5,636 transMapEnsemblV5,685 transMapEnsemblV5,699 transMapEnsemblV5,706 transMapEnsemblV5,764 transMapEstV5,9 transMapEstV5,62 transMapEstV5,142 transMapEstV5,167 transMapEstV5,332 transMapEstV5,334 transMapEstV5,358 transMapEstV5,375 transMapEstV5,401 transMapEstV5,432 transMapEstV5,448 transMapEstV5,463 transMapEstV5,520 transMapEstV5,605 transMapEstV5,654 transMapEstV5,668 transMapEstV5,675 transMapEstV5,733 transMapRefSeqV5,10 transMapRefSeqV5,62 transMapRefSeqV5,142 transMapRefSeqV5,167 transMapRefSeqV5,332 transMapRefSeqV5,334 transMapRefSeqV5,358 transMapRefSeqV5,375 transMapRefSeqV5,401 transMapRefSeqV5,432 transMapRefSeqV5,448 transMapRefSeqV5,463 transMapRefSeqV5,520 transMapRefSeqV5,605 transMapRefSeqV5,654 transMapRefSeqV5,668 transMapRefSeqV5,675 transMapRefSeqV5,733 transMapRnaV5,10 transMapRnaV5,62 transMapRnaV5,142 transMapRnaV5,167 transMapRnaV5,332 transMapRnaV5,334 transMapRnaV5,358 transMapRnaV5,375 transMapRnaV5,401 transMapRnaV5,432 transMapRnaV5,448 transMapRnaV5,463 transMapRnaV5,520 transMapRnaV5,605 transMapRnaV5,654 transMapRnaV5,668 transMapRnaV5,675 transMapRnaV5,733 transMapV5,8 transMapV5,16 transMapV5,73 transMapV5,87 transMapV5,138 transMapV5,161 transMapV5,168 transMapV5,248 transMapV5,273 transMapV5,438 transMapV5,440 transMapV5,464 transMapV5,481 transMapV5,507 transMapV5,538 transMapV5,554 transMapV5,569 transMapV5,626 transMapV5,711 transMapV5,760 transMapV5,774 transMapV5,781 transMapV5,839 unipAliSwissprot,19 unipAliTrembl,11 unipChain,9 unipConflict,7 unipDisulfBond,7 unipDomain,5 unipInterest,7 unipLocCytopl,6 unipLocExtra,6 unipLocSignal,7 unipLocTransMemb,6 unipModif,8 unipMut,7 unipOther,7 unipRepeat,5 unipStruct,9 uniprot,8 uniprot,17 uniprot,174 uniprot,329 uniprot,345 uniprot,355 uniprot,369 uniprot,378 uniprot,403 uniprot,433 uniprot,439 uniprot,448 uniprot,488 uniprot,517 uniprot,568 uniprot,589 uniprot,611 uniprot,617 uniprot,702 uniprot,761 uniprot,796 uniprot,866 uniprot,926 uniprot,939 uniprot,1122 uniprot,1214 uniprot,1310 uniprot,1342 uniprot,1375 uniprot,1420 uniprot,1465 uniprot,1498 uniprot,1598 uniprot,1617 uniprot,1650 uniprot,1691 uniprot,1790 uniprot,1898 uniprot,1958 uniprot,1970 uniprot,2028 uniprot,2036 windowmaskerSdust,10 xenoMrna,8 xenoMrna,19 xenoMrna,31 xenoMrna,150 xenoMrna,300 xenoMrna,459 xenoRefGene,7 xenoRefGene,16 xenoRefGene,43 xenoRefGene,77 xenoRefGene,127 xenoRefGene,152 xenoRefGene,185 xenoRefGene,198 xenoRefGene,265 xenoRefGene,292 xenoRefGene,377 annot unipOther,2 annotated uniprot,736 uniprot,994 uniprot,1014 uniprot,1027 uniprot,1034 uniprot,1040 uniprot,1053 uniprot,1082 uniprot,1233 uniprot,1265 annotation chainDanRer7,296 chainFr3,296 chainGalGal6,296 chainGasAcu1,296 chainHg19,296 chainMm10,296 chainNetDanRer7,299 chainNetFr3,299 chainNetGalGal6,299 chainNetGasAcu1,299 chainNetHg19,299 chainNetMm10,299 chainNetOryLat2,303 chainOryLat2,300 ensGene,165 netDanRer7,296 netFr3,296 netGalGal6,296 netGasAcu1,296 netHg19,296 netMm10,296 netOryLat2,300 transMapEnsemblV5,606 transMapEstV5,575 transMapRefSeqV5,575 transMapRnaV5,575 transMapV5,681 uniprot,143 uniprot,466 uniprot,487 uniprot,530 uniprot,605 uniprot,624 uniprot,1731 annotationonprotein uniprot,1929 annotations ensGene,156 gaze,4 gaze,18 gaze,28 genscan,120 nestedRepeats,71 tRNAs,99 transMapEnsemblV5,60 transMapEnsemblV5,539 transMapEnsemblV5,700 transMapEnsemblV5,708 transMapEstV5,508 transMapEstV5,669 transMapEstV5,677 transMapRefSeqV5,508 transMapRefSeqV5,669 transMapRefSeqV5,677 transMapRnaV5,508 transMapRnaV5,669 transMapRnaV5,677 transMapV5,75 transMapV5,614 transMapV5,775 transMapV5,783 unipOther,5 unipStruct,7 uniprot,6 uniprot,18 uniprot,54 uniprot,96 uniprot,128 uniprot,171 uniprot,212 uniprot,363 uniprot,394 uniprot,397 uniprot,455 uniprot,501 uniprot,595 uniprot,631 uniprot,662 uniprot,704 uniprot,718 uniprot,763 uniprot,1438 uniprot,1504 uniprot,1514 uniprot,1757 xenoRefGene,186 another transMapV5,80 any mrna,249 uniprot,660 uniprot,1146 uniprot,1250 xenoMrna,323 anything tRNAs,118 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 ensGene,109 transMapEnsemblV5,563 transMapEstV5,532 transMapRefSeqV5,532 transMapRnaV5,532 transMapV5,638 appear tRNAs,326 appending transMapEnsemblV5,396 transMapEstV5,365 transMapRefSeqV5,365 transMapRnaV5,365 transMapV5,471 apply mrna,132 xenoMrna,206 approach gold,186 uniprot,1531 appropriate xenoRefGene,110 apr genscan,224 mrna,457 tRNAs,504 xenoMrna,526 xenoRefGene,309 apsects gc5Base,51 arachne gold,216 archaea tRNAs,104 archive ensGene,142 uniprot,893 uniprot,1670 uniprot,1908 archives uniprot,1832 are augustusGene,27 chainDanRer7,21 chainDanRer7,40 chainDanRer7,53 chainDanRer7,140 chainDanRer7,208 chainDanRer7,219 chainDanRer7,318 chainDanRer7,387 chainDanRer7,408 chainDanRer7,415 chainDanRer7,498 chainDanRer7,687 chainFr3,21 chainFr3,40 chainFr3,53 chainFr3,140 chainFr3,208 chainFr3,219 chainFr3,318 chainFr3,387 chainFr3,408 chainFr3,415 chainFr3,498 chainFr3,687 chainGalGal6,21 chainGalGal6,40 chainGalGal6,53 chainGalGal6,140 chainGalGal6,208 chainGalGal6,219 chainGalGal6,318 chainGalGal6,387 chainGalGal6,408 chainGalGal6,415 chainGalGal6,498 chainGalGal6,687 chainGasAcu1,21 chainGasAcu1,40 chainGasAcu1,53 chainGasAcu1,140 chainGasAcu1,208 chainGasAcu1,219 chainGasAcu1,318 chainGasAcu1,387 chainGasAcu1,408 chainGasAcu1,415 chainGasAcu1,498 chainGasAcu1,687 chainHg19,21 chainHg19,40 chainHg19,53 chainHg19,140 chainHg19,208 chainHg19,219 chainHg19,318 chainHg19,387 chainHg19,408 chainHg19,415 chainHg19,498 chainHg19,687 chainMm10,21 chainMm10,40 chainMm10,53 chainMm10,140 chainMm10,208 chainMm10,219 chainMm10,318 chainMm10,387 chainMm10,408 chainMm10,415 chainMm10,498 chainMm10,687 chainNetDanRer7,24 chainNetDanRer7,43 chainNetDanRer7,56 chainNetDanRer7,143 chainNetDanRer7,211 chainNetDanRer7,222 chainNetDanRer7,321 chainNetDanRer7,390 chainNetDanRer7,411 chainNetDanRer7,418 chainNetDanRer7,501 chainNetDanRer7,690 chainNetFr3,24 chainNetFr3,43 chainNetFr3,56 chainNetFr3,143 chainNetFr3,211 chainNetFr3,222 chainNetFr3,321 chainNetFr3,390 chainNetFr3,411 chainNetFr3,418 chainNetFr3,501 chainNetFr3,690 chainNetGalGal6,24 chainNetGalGal6,43 chainNetGalGal6,56 chainNetGalGal6,143 chainNetGalGal6,211 chainNetGalGal6,222 chainNetGalGal6,321 chainNetGalGal6,390 chainNetGalGal6,411 chainNetGalGal6,418 chainNetGalGal6,501 chainNetGalGal6,690 chainNetGasAcu1,24 chainNetGasAcu1,43 chainNetGasAcu1,56 chainNetGasAcu1,143 chainNetGasAcu1,211 chainNetGasAcu1,222 chainNetGasAcu1,321 chainNetGasAcu1,390 chainNetGasAcu1,411 chainNetGasAcu1,418 chainNetGasAcu1,501 chainNetGasAcu1,690 chainNetHg19,24 chainNetHg19,43 chainNetHg19,56 chainNetHg19,143 chainNetHg19,211 chainNetHg19,222 chainNetHg19,321 chainNetHg19,390 chainNetHg19,411 chainNetHg19,418 chainNetHg19,501 chainNetHg19,690 chainNetMm10,24 chainNetMm10,43 chainNetMm10,56 chainNetMm10,143 chainNetMm10,211 chainNetMm10,222 chainNetMm10,321 chainNetMm10,390 chainNetMm10,411 chainNetMm10,418 chainNetMm10,501 chainNetMm10,690 chainNetOryLat2,26 chainNetOryLat2,45 chainNetOryLat2,58 chainNetOryLat2,147 chainNetOryLat2,215 chainNetOryLat2,226 chainNetOryLat2,327 chainNetOryLat2,396 chainNetOryLat2,417 chainNetOryLat2,424 chainNetOryLat2,507 chainNetOryLat2,696 chainOryLat2,23 chainOryLat2,42 chainOryLat2,55 chainOryLat2,144 chainOryLat2,212 chainOryLat2,223 chainOryLat2,324 chainOryLat2,393 chainOryLat2,414 chainOryLat2,421 chainOryLat2,504 chainOryLat2,693 cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 ensGene,81 ensGene,121 gap,16 gap,115 gap,128 gap,147 gap,168 genscan,25 genscan,160 gold,81 gold,99 gold,148 gold,166 microsat,16 microsat,25 microsat,52 mrna,46 mrna,93 mrna,103 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 netDanRer7,21 netDanRer7,40 netDanRer7,53 netDanRer7,140 netDanRer7,208 netDanRer7,219 netDanRer7,318 netDanRer7,387 netDanRer7,408 netDanRer7,415 netDanRer7,498 netDanRer7,687 netFr3,21 netFr3,40 netFr3,53 netFr3,140 netFr3,208 netFr3,219 netFr3,318 netFr3,387 netFr3,408 netFr3,415 netFr3,498 netFr3,687 netGalGal6,21 netGalGal6,40 netGalGal6,53 netGalGal6,140 netGalGal6,208 netGalGal6,219 netGalGal6,318 netGalGal6,387 netGalGal6,408 netGalGal6,415 netGalGal6,498 netGalGal6,687 netGasAcu1,21 netGasAcu1,40 netGasAcu1,53 netGasAcu1,140 netGasAcu1,208 netGasAcu1,219 netGasAcu1,318 netGasAcu1,387 netGasAcu1,408 netGasAcu1,415 netGasAcu1,498 netGasAcu1,687 netHg19,21 netHg19,40 netHg19,53 netHg19,140 netHg19,208 netHg19,219 netHg19,318 netHg19,387 netHg19,408 netHg19,415 netHg19,498 netHg19,687 netMm10,21 netMm10,40 netMm10,53 netMm10,140 netMm10,208 netMm10,219 netMm10,318 netMm10,387 netMm10,408 netMm10,415 netMm10,498 netMm10,687 netOryLat2,23 netOryLat2,42 netOryLat2,55 netOryLat2,144 netOryLat2,212 netOryLat2,223 netOryLat2,324 netOryLat2,393 netOryLat2,414 netOryLat2,421 netOryLat2,504 netOryLat2,693 simpleRepeat,49 tRNAs,105 tRNAs,168 tRNAs,190 tRNAs,202 tRNAs,262 tRNAs,266 tRNAs,292 tRNAs,297 tRNAs,333 transMapEnsemblV5,55 transMapEnsemblV5,73 transMapEnsemblV5,451 transMapEnsemblV5,458 transMapEnsemblV5,467 transMapEnsemblV5,501 transMapEnsemblV5,511 transMapEnsemblV5,540 transMapEnsemblV5,579 transMapEstV5,42 transMapEstV5,420 transMapEstV5,427 transMapEstV5,436 transMapEstV5,470 transMapEstV5,480 transMapEstV5,509 transMapEstV5,548 transMapRefSeqV5,42 transMapRefSeqV5,420 transMapRefSeqV5,427 transMapRefSeqV5,436 transMapRefSeqV5,470 transMapRefSeqV5,480 transMapRefSeqV5,509 transMapRefSeqV5,548 transMapRnaV5,42 transMapRnaV5,420 transMapRnaV5,427 transMapRnaV5,436 transMapRnaV5,470 transMapRnaV5,480 transMapRnaV5,509 transMapRnaV5,548 transMapV5,41 transMapV5,68 transMapV5,526 transMapV5,533 transMapV5,542 transMapV5,576 transMapV5,586 transMapV5,615 transMapV5,654 uniprot,55 uniprot,93 uniprot,124 uniprot,146 uniprot,165 uniprot,175 uniprot,208 uniprot,456 uniprot,502 uniprot,555 uniprot,579 uniprot,596 uniprot,644 uniprot,679 uniprot,735 uniprot,868 uniprot,880 uniprot,1006 uniprot,1013 uniprot,1033 uniprot,1061 uniprot,1086 uniprot,1117 uniprot,1149 uniprot,1318 uniprot,1350 uniprot,1425 uniprot,1433 uniprot,1454 uniprot,1659 uniprot,1867 uniprot,1895 xenoMrna,50 xenoMrna,116 xenoMrna,167 xenoMrna,177 xenoRefGene,38 xenoRefGene,103 xenoRefGene,201 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5Base,37 arian chainDanRer7,939 chainFr3,939 chainGalGal6,939 chainGasAcu1,939 chainHg19,939 chainMm10,939 chainNetDanRer7,942 chainNetFr3,942 chainNetGalGal6,942 chainNetGasAcu1,942 chainNetHg19,942 chainNetMm10,942 chainNetOryLat2,948 chainOryLat2,945 nestedRepeats,305 netDanRer7,939 netFr3,939 netGalGal6,939 netGasAcu1,939 netHg19,939 netMm10,939 netOryLat2,945 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrows nestedRepeats,145 nestedRepeats,163 articles tRNAs,365 as augustusGene,77 augustusGene,79 chainDanRer7,460 chainDanRer7,500 chainDanRer7,523 chainDanRer7,538 chainDanRer7,798 chainDanRer7,853 chainDanRer7,911 chainFr3,460 chainFr3,500 chainFr3,523 chainFr3,538 chainFr3,798 chainFr3,853 chainFr3,911 chainGalGal6,460 chainGalGal6,500 chainGalGal6,523 chainGalGal6,538 chainGalGal6,798 chainGalGal6,853 chainGalGal6,911 chainGasAcu1,460 chainGasAcu1,500 chainGasAcu1,523 chainGasAcu1,538 chainGasAcu1,798 chainGasAcu1,853 chainGasAcu1,911 chainHg19,460 chainHg19,500 chainHg19,523 chainHg19,538 chainHg19,798 chainHg19,853 chainHg19,911 chainMm10,460 chainMm10,500 chainMm10,523 chainMm10,538 chainMm10,798 chainMm10,853 chainMm10,911 chainNetDanRer7,463 chainNetDanRer7,503 chainNetDanRer7,526 chainNetDanRer7,541 chainNetDanRer7,801 chainNetDanRer7,856 chainNetDanRer7,914 chainNetFr3,463 chainNetFr3,503 chainNetFr3,526 chainNetFr3,541 chainNetFr3,801 chainNetFr3,856 chainNetFr3,914 chainNetGalGal6,463 chainNetGalGal6,503 chainNetGalGal6,526 chainNetGalGal6,541 chainNetGalGal6,801 chainNetGalGal6,856 chainNetGalGal6,914 chainNetGasAcu1,463 chainNetGasAcu1,503 chainNetGasAcu1,526 chainNetGasAcu1,541 chainNetGasAcu1,801 chainNetGasAcu1,856 chainNetGasAcu1,914 chainNetHg19,463 chainNetHg19,503 chainNetHg19,526 chainNetHg19,541 chainNetHg19,801 chainNetHg19,856 chainNetHg19,914 chainNetMm10,463 chainNetMm10,503 chainNetMm10,526 chainNetMm10,541 chainNetMm10,801 chainNetMm10,856 chainNetMm10,914 chainNetOryLat2,469 chainNetOryLat2,509 chainNetOryLat2,532 chainNetOryLat2,547 chainNetOryLat2,807 chainNetOryLat2,862 chainNetOryLat2,920 chainOryLat2,466 chainOryLat2,506 chainOryLat2,529 chainOryLat2,544 chainOryLat2,804 chainOryLat2,859 chainOryLat2,917 cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 ensGene,87 gap,18 genscan,35 genscan,37 gold,137 gold,263 microsat,21 nestedRepeats,125 netDanRer7,460 netDanRer7,500 netDanRer7,523 netDanRer7,538 netDanRer7,798 netDanRer7,853 netDanRer7,911 netFr3,460 netFr3,500 netFr3,523 netFr3,538 netFr3,798 netFr3,853 netFr3,911 netGalGal6,460 netGalGal6,500 netGalGal6,523 netGalGal6,538 netGalGal6,798 netGalGal6,853 netGalGal6,911 netGasAcu1,460 netGasAcu1,500 netGasAcu1,523 netGasAcu1,538 netGasAcu1,798 netGasAcu1,853 netGasAcu1,911 netHg19,460 netHg19,500 netHg19,523 netHg19,538 netHg19,798 netHg19,853 netHg19,911 netMm10,460 netMm10,500 netMm10,523 netMm10,538 netMm10,798 netMm10,853 netMm10,911 netOryLat2,466 netOryLat2,506 netOryLat2,529 netOryLat2,544 netOryLat2,804 netOryLat2,859 netOryLat2,917 tRNAs,42 tRNAs,288 transMapEnsemblV5,65 transMapEnsemblV5,187 transMapEnsemblV5,213 transMapEnsemblV5,225 transMapEnsemblV5,513 transMapEnsemblV5,624 transMapEstV5,156 transMapEstV5,182 transMapEstV5,194 transMapEstV5,482 transMapEstV5,593 transMapRefSeqV5,156 transMapRefSeqV5,182 transMapRefSeqV5,194 transMapRefSeqV5,482 transMapRefSeqV5,593 transMapRnaV5,156 transMapRnaV5,182 transMapRnaV5,194 transMapRnaV5,482 transMapRnaV5,593 transMapV5,262 transMapV5,288 transMapV5,300 transMapV5,588 transMapV5,699 uniprot,307 uniprot,598 uniprot,600 uniprot,621 uniprot,1100 uniprot,1778 windowmaskerSdust,18 xenoMrna,123 xenoMrna,128 ascii uniprot,1762 assembled gold,77 assemblies augustusGene,196 augustusGene,237 chainDanRer7,317 chainDanRer7,579 chainFr3,317 chainFr3,579 chainGalGal6,317 chainGalGal6,579 chainGasAcu1,317 chainGasAcu1,579 chainHg19,317 chainHg19,579 chainMm10,317 chainMm10,579 chainNetDanRer7,320 chainNetDanRer7,582 chainNetFr3,320 chainNetFr3,582 chainNetGalGal6,320 chainNetGalGal6,582 chainNetGasAcu1,320 chainNetGasAcu1,582 chainNetHg19,320 chainNetHg19,582 chainNetMm10,320 chainNetMm10,582 chainNetOryLat2,326 chainNetOryLat2,588 chainOryLat2,323 chainOryLat2,585 netDanRer7,317 netDanRer7,579 netFr3,317 netFr3,579 netGalGal6,317 netGalGal6,579 netGasAcu1,317 netGasAcu1,579 netHg19,317 netHg19,579 netMm10,317 netMm10,579 netOryLat2,323 netOryLat2,585 transMapEnsemblV5,192 transMapEstV5,161 transMapRefSeqV5,161 transMapRnaV5,161 transMapV5,267 assembly augustusGene,197 chainDanRer7,149 chainDanRer7,156 chainDanRer7,304 chainFr3,149 chainFr3,156 chainFr3,304 chainGalGal6,149 chainGalGal6,156 chainGalGal6,304 chainGasAcu1,149 chainGasAcu1,156 chainGasAcu1,304 chainHg19,149 chainHg19,156 chainHg19,304 chainMm10,149 chainMm10,156 chainMm10,304 chainNetDanRer7,152 chainNetDanRer7,159 chainNetDanRer7,307 chainNetFr3,152 chainNetFr3,159 chainNetFr3,307 chainNetGalGal6,152 chainNetGalGal6,159 chainNetGalGal6,307 chainNetGasAcu1,152 chainNetGasAcu1,159 chainNetGasAcu1,307 chainNetHg19,152 chainNetHg19,159 chainNetHg19,307 chainNetMm10,152 chainNetMm10,159 chainNetMm10,307 chainNetOryLat2,156 chainNetOryLat2,163 chainNetOryLat2,313 chainOryLat2,153 chainOryLat2,160 chainOryLat2,310 gap,14 gap,64 gap,124 gap,154 gap,176 gap,190 gold,2 gold,16 gold,25 gold,177 gold,196 gold,238 netDanRer7,149 netDanRer7,156 netDanRer7,304 netFr3,149 netFr3,156 netFr3,304 netGalGal6,149 netGalGal6,156 netGalGal6,304 netGasAcu1,149 netGasAcu1,156 netGasAcu1,304 netHg19,149 netHg19,156 netHg19,304 netMm10,149 netMm10,156 netMm10,304 netOryLat2,153 netOryLat2,160 netOryLat2,310 transMapV5,105 transMapV5,123 transMapV5,134 uniprot,445 uniprot,701 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 assigned transMapEnsemblV5,459 transMapEstV5,428 transMapRefSeqV5,428 transMapRnaV5,428 transMapV5,534 associated cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 gc5Base,34 simpleRepeat,51 transMapEnsemblV5,580 transMapEstV5,549 transMapRefSeqV5,549 transMapRnaV5,549 transMapV5,655 uniprot,787 astashyn xenoRefGene,325 at blastHg18KG,125 chainDanRer7,417 chainDanRer7,793 chainDanRer7,915 chainDanRer7,950 chainDanRer7,955 chainDanRer7,996 chainFr3,417 chainFr3,793 chainFr3,915 chainFr3,950 chainFr3,955 chainFr3,996 chainGalGal6,417 chainGalGal6,793 chainGalGal6,915 chainGalGal6,950 chainGalGal6,955 chainGalGal6,996 chainGasAcu1,417 chainGasAcu1,793 chainGasAcu1,915 chainGasAcu1,950 chainGasAcu1,955 chainGasAcu1,996 chainHg19,417 chainHg19,793 chainHg19,915 chainHg19,950 chainHg19,955 chainHg19,996 chainMm10,417 chainMm10,793 chainMm10,915 chainMm10,950 chainMm10,955 chainMm10,996 chainNetDanRer7,420 chainNetDanRer7,796 chainNetDanRer7,918 chainNetDanRer7,953 chainNetDanRer7,958 chainNetDanRer7,999 chainNetFr3,420 chainNetFr3,796 chainNetFr3,918 chainNetFr3,953 chainNetFr3,958 chainNetFr3,999 chainNetGalGal6,420 chainNetGalGal6,796 chainNetGalGal6,918 chainNetGalGal6,953 chainNetGalGal6,958 chainNetGalGal6,999 chainNetGasAcu1,420 chainNetGasAcu1,796 chainNetGasAcu1,918 chainNetGasAcu1,953 chainNetGasAcu1,958 chainNetGasAcu1,999 chainNetHg19,420 chainNetHg19,796 chainNetHg19,918 chainNetHg19,953 chainNetHg19,958 chainNetHg19,999 chainNetMm10,420 chainNetMm10,796 chainNetMm10,918 chainNetMm10,953 chainNetMm10,958 chainNetMm10,999 chainNetOryLat2,426 chainNetOryLat2,802 chainNetOryLat2,924 chainNetOryLat2,959 chainNetOryLat2,964 chainNetOryLat2,1005 chainOryLat2,423 chainOryLat2,799 chainOryLat2,921 chainOryLat2,956 chainOryLat2,961 chainOryLat2,1002 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 gold,293 microsat,28 microsat,77 mrna,386 mrna,404 netDanRer7,417 netDanRer7,793 netDanRer7,915 netDanRer7,950 netDanRer7,955 netDanRer7,996 netFr3,417 netFr3,793 netFr3,915 netFr3,950 netFr3,955 netFr3,996 netGalGal6,417 netGalGal6,793 netGalGal6,915 netGalGal6,950 netGalGal6,955 netGalGal6,996 netGasAcu1,417 netGasAcu1,793 netGasAcu1,915 netGasAcu1,950 netGasAcu1,955 netGasAcu1,996 netHg19,417 netHg19,793 netHg19,915 netHg19,950 netHg19,955 netHg19,996 netMm10,417 netMm10,793 netMm10,915 netMm10,950 netMm10,955 netMm10,996 netOryLat2,423 netOryLat2,799 netOryLat2,921 netOryLat2,956 netOryLat2,961 netOryLat2,1002 tRNAs,107 tRNAs,339 transMapEnsemblV5,293 transMapEnsemblV5,681 transMapEstV5,262 transMapEstV5,650 transMapRefSeqV5,262 transMapRefSeqV5,650 transMapRnaV5,262 transMapRnaV5,650 transMapV5,117 transMapV5,368 transMapV5,756 uniprot,825 uniprot,1946 uniprot,1991 xenoMrna,460 xenoMrna,473 xenoRefGene,91 xenoRefGene,266 xenoRefGene,282 atypical tRNAs,274 aug tRNAs,433 augustus augustusGene,1 augustusGene,2 augustusGene,22 augustusGene,148 augustusGene,256 uniprot,835 uniprot,867 auml windowmaskerSdust,95 automated transMapEnsemblV5,536 transMapEstV5,505 transMapRefSeqV5,505 transMapRnaV5,505 transMapV5,611 uniprot,1468 uniprot,1727 automatically uniprot,1565 av uniprot,2015 available augustusGene,239 cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 ensGene,82 ensGene,122 nestedRepeats,259 nestedRepeats,276 tRNAs,106 transMapEnsemblV5,188 transMapEnsemblV5,245 transMapEstV5,157 transMapEstV5,214 transMapRefSeqV5,157 transMapRefSeqV5,214 transMapRnaV5,157 transMapRnaV5,214 transMapV5,263 transMapV5,320 uniprot,881 uniprot,1660 uniprot,1981 windowmaskerSdust,40 average nestedRepeats,186 nestedRepeats,221 aware uniprot,1456 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 axt chainDanRer7,600 chainDanRer7,607 chainFr3,600 chainFr3,607 chainGalGal6,600 chainGalGal6,607 chainGasAcu1,600 chainGasAcu1,607 chainHg19,600 chainHg19,607 chainMm10,600 chainMm10,607 chainNetDanRer7,603 chainNetDanRer7,610 chainNetFr3,603 chainNetFr3,610 chainNetGalGal6,603 chainNetGalGal6,610 chainNetGasAcu1,603 chainNetGasAcu1,610 chainNetHg19,603 chainNetHg19,610 chainNetMm10,603 chainNetMm10,610 chainNetOryLat2,609 chainNetOryLat2,616 chainOryLat2,606 chainOryLat2,613 netDanRer7,600 netDanRer7,607 netFr3,600 netFr3,607 netGalGal6,600 netGalGal6,607 netGasAcu1,600 netGasAcu1,607 netHg19,600 netHg19,607 netMm10,600 netMm10,607 netOryLat2,606 netOryLat2,613 axtchain chainDanRer7,612 chainDanRer7,698 chainDanRer7,946 chainFr3,612 chainFr3,698 chainFr3,946 chainGalGal6,612 chainGalGal6,698 chainGalGal6,946 chainGasAcu1,612 chainGasAcu1,698 chainGasAcu1,946 chainHg19,612 chainHg19,698 chainHg19,946 chainMm10,612 chainMm10,698 chainMm10,946 chainNetDanRer7,615 chainNetDanRer7,701 chainNetDanRer7,949 chainNetFr3,615 chainNetFr3,701 chainNetFr3,949 chainNetGalGal6,615 chainNetGalGal6,701 chainNetGalGal6,949 chainNetGasAcu1,615 chainNetGasAcu1,701 chainNetGasAcu1,949 chainNetHg19,615 chainNetHg19,701 chainNetHg19,949 chainNetMm10,615 chainNetMm10,701 chainNetMm10,949 chainNetOryLat2,621 chainNetOryLat2,707 chainNetOryLat2,955 chainOryLat2,618 chainOryLat2,704 chainOryLat2,952 netDanRer7,612 netDanRer7,698 netDanRer7,946 netFr3,612 netFr3,698 netFr3,946 netGalGal6,612 netGalGal6,698 netGalGal6,946 netGasAcu1,612 netGasAcu1,698 netGasAcu1,946 netHg19,612 netHg19,698 netHg19,946 netMm10,612 netMm10,698 netMm10,946 netOryLat2,618 netOryLat2,704 netOryLat2,952 b tRNAs,36 transMapEnsemblV5,717 transMapEnsemblV5,727 transMapEstV5,686 transMapEstV5,696 transMapRefSeqV5,686 transMapRefSeqV5,696 transMapRnaV5,686 transMapRnaV5,696 transMapV5,792 transMapV5,802 back chainDanRer7,592 chainFr3,592 chainGalGal6,592 chainGasAcu1,592 chainHg19,592 chainMm10,592 chainNetDanRer7,595 chainNetFr3,595 chainNetGalGal6,595 chainNetGasAcu1,595 chainNetHg19,595 chainNetMm10,595 chainNetOryLat2,601 chainOryLat2,598 netDanRer7,592 netFr3,592 netGalGal6,592 netGasAcu1,592 netHg19,592 netMm10,592 netOryLat2,598 bacteria tRNAs,102 baertsch augustusGene,290 chainDanRer7,984 chainDanRer7,1042 chainDanRer7,1088 chainFr3,984 chainFr3,1042 chainFr3,1088 chainGalGal6,984 chainGalGal6,1042 chainGalGal6,1088 chainGasAcu1,984 chainGasAcu1,1042 chainGasAcu1,1088 chainHg19,984 chainHg19,1042 chainHg19,1088 chainMm10,984 chainMm10,1042 chainMm10,1088 chainNetDanRer7,987 chainNetDanRer7,1045 chainNetDanRer7,1091 chainNetFr3,987 chainNetFr3,1045 chainNetFr3,1091 chainNetGalGal6,987 chainNetGalGal6,1045 chainNetGalGal6,1091 chainNetGasAcu1,987 chainNetGasAcu1,1045 chainNetGasAcu1,1091 chainNetHg19,987 chainNetHg19,1045 chainNetHg19,1091 chainNetMm10,987 chainNetMm10,1045 chainNetMm10,1091 chainNetOryLat2,993 chainNetOryLat2,1051 chainNetOryLat2,1097 chainOryLat2,990 chainOryLat2,1048 chainOryLat2,1094 netDanRer7,984 netDanRer7,1042 netDanRer7,1088 netFr3,984 netFr3,1042 netFr3,1088 netGalGal6,984 netGalGal6,1042 netGalGal6,1088 netGasAcu1,984 netGasAcu1,1042 netGasAcu1,1088 netHg19,984 netHg19,1042 netHg19,1088 netMm10,984 netMm10,1042 netMm10,1088 netOryLat2,990 netOryLat2,1048 netOryLat2,1094 transMapEnsemblV5,758 transMapEstV5,727 transMapRefSeqV5,727 transMapRnaV5,727 transMapV5,833 bairoch uniprot,2022 band cytoBandIdeo,2 barker ensGene,170 base cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 gold,56 mrna,369 mrna,377 mrna,389 xenoMrna,442 xenoMrna,451 xenoMrna,463 xenoRefGene,249 xenoRefGene,257 xenoRefGene,269 base-level transMapEnsemblV5,319 transMapEstV5,288 transMapRefSeqV5,288 transMapRnaV5,288 transMapV5,394 based augustusGene,28 chainDanRer7,320 chainDanRer7,346 chainFr3,320 chainFr3,346 chainGalGal6,320 chainGalGal6,346 chainGasAcu1,320 chainGasAcu1,346 chainHg19,320 chainHg19,346 chainMm10,320 chainMm10,346 chainNetDanRer7,323 chainNetDanRer7,349 chainNetFr3,323 chainNetFr3,349 chainNetGalGal6,323 chainNetGalGal6,349 chainNetGasAcu1,323 chainNetGasAcu1,349 chainNetHg19,323 chainNetHg19,349 chainNetMm10,323 chainNetMm10,349 chainNetOryLat2,329 chainNetOryLat2,355 chainOryLat2,326 chainOryLat2,352 genscan,26 netDanRer7,320 netDanRer7,346 netFr3,320 netFr3,346 netGalGal6,320 netGalGal6,346 netGasAcu1,320 netGasAcu1,346 netHg19,320 netHg19,346 netMm10,320 netMm10,346 netOryLat2,326 netOryLat2,352 tRNAs,268 uniprot,60 uniprot,727 uniprot,1604 bases cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 gap,179 gc5Base,25 transMapV5,165 basic blastHg18KG,163 basis cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 uniprot,1570 bc149621.1 transMapEnsemblV5,456 transMapEstV5,425 transMapRefSeqV5,425 transMapRnaV5,425 transMapV5,531 bc149621.1-1 transMapEnsemblV5,462 transMapEnsemblV5,473 transMapEstV5,431 transMapEstV5,442 transMapRefSeqV5,431 transMapRefSeqV5,442 transMapRnaV5,431 transMapRnaV5,442 transMapV5,537 transMapV5,548 bc149621.1-1.1 transMapEnsemblV5,484 transMapEstV5,453 transMapRefSeqV5,453 transMapRnaV5,453 transMapV5,559 bc149621.1-2 transMapEnsemblV5,464 transMapEnsemblV5,486 transMapEstV5,433 transMapEstV5,455 transMapRefSeqV5,433 transMapRefSeqV5,455 transMapRnaV5,433 transMapRnaV5,455 transMapV5,539 transMapV5,561 bc149621.1-2.1 transMapEnsemblV5,493 transMapEstV5,462 transMapRefSeqV5,462 transMapRnaV5,462 transMapV5,568 bc149621.1-2.2 transMapEnsemblV5,495 transMapEstV5,464 transMapRefSeqV5,464 transMapRnaV5,464 transMapV5,570 be augustusGene,99 chainDanRer7,106 chainDanRer7,427 chainFr3,106 chainFr3,427 chainGalGal6,106 chainGalGal6,427 chainGasAcu1,106 chainGasAcu1,427 chainHg19,106 chainHg19,427 chainMm10,106 chainMm10,427 chainNetDanRer7,109 chainNetDanRer7,430 chainNetFr3,109 chainNetFr3,430 chainNetGalGal6,109 chainNetGalGal6,430 chainNetGasAcu1,109 chainNetGasAcu1,430 chainNetHg19,109 chainNetHg19,430 chainNetMm10,109 chainNetMm10,430 chainNetOryLat2,113 chainNetOryLat2,436 chainOryLat2,110 chainOryLat2,433 cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 ensGene,61 ensGene,104 ensGene,138 gap,164 gc5Base,41 gold,53 gold,250 gold,259 microsat,19 microsat,39 mrna,66 mrna,88 mrna,197 mrna,207 mrna,238 mrna,256 mrna,266 mrna,315 nestedRepeats,269 nestedRepeats,291 netDanRer7,106 netDanRer7,427 netFr3,106 netFr3,427 netGalGal6,106 netGalGal6,427 netGasAcu1,106 netGasAcu1,427 netHg19,106 netHg19,427 netMm10,106 netMm10,427 netOryLat2,110 netOryLat2,433 simpleRepeat,44 tRNAs,128 tRNAs,220 tRNAs,227 transMapEnsemblV5,63 transMapEnsemblV5,109 transMapEnsemblV5,144 transMapEnsemblV5,524 transMapEnsemblV5,553 transMapEnsemblV5,608 transMapEnsemblV5,616 transMapEnsemblV5,639 transMapEnsemblV5,646 transMapEstV5,78 transMapEstV5,113 transMapEstV5,493 transMapEstV5,522 transMapEstV5,577 transMapEstV5,585 transMapEstV5,608 transMapEstV5,615 transMapRefSeqV5,78 transMapRefSeqV5,113 transMapRefSeqV5,493 transMapRefSeqV5,522 transMapRefSeqV5,577 transMapRefSeqV5,585 transMapRefSeqV5,608 transMapRefSeqV5,615 transMapRnaV5,78 transMapRnaV5,113 transMapRnaV5,493 transMapRnaV5,522 transMapRnaV5,577 transMapRnaV5,585 transMapRnaV5,608 transMapRnaV5,615 transMapV5,184 transMapV5,219 transMapV5,599 transMapV5,628 transMapV5,683 transMapV5,691 transMapV5,714 transMapV5,721 uniprot,181 uniprot,246 uniprot,1094 uniprot,1105 uniprot,1143 uniprot,1197 uniprot,1270 uniprot,1327 uniprot,1556 uniprot,1694 uniprot,1715 uniprot,1740 uniprot,1750 uniprot,1759 uniprot,1770 uniprot,1793 uniprot,1800 uniprot,1882 xenoMrna,140 xenoMrna,162 xenoMrna,271 xenoMrna,281 xenoMrna,312 xenoMrna,330 xenoMrna,340 xenoMrna,389 xenoRefGene,86 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 uniprot,674 xenoMrna,102 bed3 windowmaskerSdust,76 been chainDanRer7,568 chainFr3,568 chainGalGal6,568 chainGasAcu1,568 chainHg19,568 chainMm10,568 chainNetDanRer7,571 chainNetFr3,571 chainNetGalGal6,571 chainNetGasAcu1,571 chainNetHg19,571 chainNetMm10,571 chainNetOryLat2,577 chainOryLat2,574 nestedRepeats,89 netDanRer7,568 netFr3,568 netGalGal6,568 netGasAcu1,568 netHg19,568 netMm10,568 netOryLat2,574 uniprot,34 uniprot,47 uniprot,303 uniprot,1043 before chainDanRer7,900 chainFr3,900 chainGalGal6,900 chainGasAcu1,900 chainHg19,900 chainMm10,900 chainNetDanRer7,903 chainNetFr3,903 chainNetGalGal6,903 chainNetGasAcu1,903 chainNetHg19,903 chainNetMm10,903 chainNetOryLat2,909 chainOryLat2,906 netDanRer7,900 netFr3,900 netGalGal6,900 netGasAcu1,900 netHg19,900 netMm10,900 netOryLat2,906 uniprot,934 below chainDanRer7,674 chainFr3,674 chainGalGal6,674 chainGasAcu1,674 chainHg19,674 chainMm10,674 chainNetDanRer7,677 chainNetFr3,677 chainNetGalGal6,677 chainNetGasAcu1,677 chainNetHg19,677 chainNetMm10,677 chainNetOryLat2,683 chainOryLat2,680 ensGene,54 genscan,154 genscan,168 nestedRepeats,68 netDanRer7,674 netFr3,674 netGalGal6,674 netGasAcu1,674 netHg19,674 netMm10,674 netOryLat2,680 tRNAs,179 uniprot,73 uniprot,92 uniprot,189 uniprot,207 uniprot,769 uniprot,898 benson microsat,102 microsat,112 microsat,114 mrna,421 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 xenoMrna,490 best blastHg18KG,100 chainDanRer7,265 chainDanRer7,510 chainFr3,265 chainFr3,510 chainGalGal6,265 chainGalGal6,510 chainGasAcu1,265 chainGasAcu1,510 chainHg19,265 chainHg19,510 chainMm10,265 chainMm10,510 chainNetDanRer7,268 chainNetDanRer7,513 chainNetFr3,268 chainNetFr3,513 chainNetGalGal6,268 chainNetGalGal6,513 chainNetGasAcu1,268 chainNetGasAcu1,513 chainNetHg19,268 chainNetHg19,513 chainNetMm10,268 chainNetMm10,513 chainNetOryLat2,272 chainNetOryLat2,519 chainOryLat2,269 chainOryLat2,516 mrna,384 netDanRer7,265 netDanRer7,510 netFr3,265 netFr3,510 netGalGal6,265 netGalGal6,510 netGasAcu1,265 netGasAcu1,510 netHg19,265 netHg19,510 netMm10,265 netMm10,510 netOryLat2,269 netOryLat2,516 transMapEnsemblV5,240 transMapEstV5,209 transMapRefSeqV5,209 transMapRnaV5,209 transMapV5,66 transMapV5,315 uniprot,1074 uniprot,1415 xenoMrna,458 xenoRefGene,264 beta uniprot,364 better mrna,53 tRNAs,254 xenoMrna,57 between chainDanRer7,51 chainDanRer7,617 chainDanRer7,847 chainFr3,51 chainFr3,617 chainFr3,847 chainGalGal6,51 chainGalGal6,617 chainGalGal6,847 chainGasAcu1,51 chainGasAcu1,617 chainGasAcu1,847 chainHg19,51 chainHg19,617 chainHg19,847 chainMm10,51 chainMm10,617 chainMm10,847 chainNetDanRer7,54 chainNetDanRer7,620 chainNetDanRer7,850 chainNetFr3,54 chainNetFr3,620 chainNetFr3,850 chainNetGalGal6,54 chainNetGalGal6,620 chainNetGalGal6,850 chainNetGasAcu1,54 chainNetGasAcu1,620 chainNetGasAcu1,850 chainNetHg19,54 chainNetHg19,620 chainNetHg19,850 chainNetMm10,54 chainNetMm10,620 chainNetMm10,850 chainNetOryLat2,56 chainNetOryLat2,626 chainNetOryLat2,856 chainOryLat2,53 chainOryLat2,623 chainOryLat2,853 gap,74 gap,137 gold,101 gold,116 gold,285 mrna,17 netDanRer7,51 netDanRer7,617 netDanRer7,847 netFr3,51 netFr3,617 netFr3,847 netGalGal6,51 netGalGal6,617 netGalGal6,847 netGasAcu1,51 netGasAcu1,617 netGasAcu1,847 netHg19,51 netHg19,617 netHg19,847 netMm10,51 netMm10,617 netMm10,847 netOryLat2,53 netOryLat2,623 netOryLat2,853 tRNAs,199 uniprot,375 uniprot,922 uniprot,1371 uniprot,1615 bias uniprot,400 bigbed uniprot,1736 bigbedtobed transMapEnsemblV5,613 transMapEnsemblV5,658 transMapEstV5,582 transMapEstV5,627 transMapRefSeqV5,582 transMapRefSeqV5,627 transMapRnaV5,582 transMapRnaV5,627 transMapV5,688 transMapV5,733 uniprot,1767 uniprot,1812 bigpsl transMapEnsemblV5,543 transMapEstV5,512 transMapRefSeqV5,512 transMapRnaV5,512 transMapV5,618 binaries transMapEnsemblV5,637 transMapEstV5,606 transMapRefSeqV5,606 transMapRnaV5,606 transMapV5,712 uniprot,1791 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 transMapEnsemblV5,627 transMapEstV5,596 transMapRefSeqV5,596 transMapRnaV5,596 transMapV5,702 uniprot,1781 biochemical tRNAs,271 biocomput chainDanRer7,1035 chainFr3,1035 chainGalGal6,1035 chainGasAcu1,1035 chainHg19,1035 chainMm10,1035 chainNetDanRer7,1038 chainNetFr3,1038 chainNetGalGal6,1038 chainNetGasAcu1,1038 chainNetHg19,1038 chainNetMm10,1038 chainNetOryLat2,1044 chainOryLat2,1041 netDanRer7,1035 netFr3,1035 netGalGal6,1035 netGasAcu1,1035 netHg19,1035 netMm10,1035 netOryLat2,1041 bioinformatics augustusGene,307 augustusGene,332 transMapEnsemblV5,775 transMapEstV5,744 transMapRefSeqV5,744 transMapRnaV5,744 transMapV5,850 windowmaskerSdust,106 biol blastHg18KG,170 cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 genscan,222 tRNAs,431 transMapEnsemblV5,810 transMapEstV5,779 transMapRefSeqV5,779 transMapRnaV5,779 transMapV5,885 biological uniprot,320 biology genscan,200 birds augustusGene,203 birney ensGene,172 bits tRNAs,124 tRNAs,167 tRNAs,201 black gap,19 gap,58 blast blastHg18KG,144 blastHg18KG,151 uniprot,949 uniprot,1084 uniprot,1115 blast-like mrna,451 xenoMrna,520 xenoRefGene,303 blastz chainDanRer7,912 chainDanRer7,1099 chainFr3,912 chainFr3,1099 chainGalGal6,912 chainGalGal6,1099 chainGasAcu1,912 chainGasAcu1,1099 chainHg19,912 chainHg19,1099 chainMm10,912 chainMm10,1099 chainNetDanRer7,915 chainNetDanRer7,1102 chainNetFr3,915 chainNetFr3,1102 chainNetGalGal6,915 chainNetGalGal6,1102 chainNetGasAcu1,915 chainNetGasAcu1,1102 chainNetHg19,915 chainNetHg19,1102 chainNetMm10,915 chainNetMm10,1102 chainNetOryLat2,921 chainNetOryLat2,1108 chainOryLat2,918 chainOryLat2,1105 netDanRer7,912 netDanRer7,1099 netFr3,912 netFr3,1099 netGalGal6,912 netGalGal6,1099 netGasAcu1,912 netGasAcu1,1099 netHg19,912 netHg19,1099 netMm10,912 netMm10,1099 netOryLat2,918 netOryLat2,1105 transMapEnsemblV5,78 transMapEnsemblV5,195 transMapEstV5,47 transMapEstV5,164 transMapRefSeqV5,47 transMapRefSeqV5,164 transMapRnaV5,47 transMapRnaV5,164 transMapV5,48 transMapV5,143 transMapV5,270 blat blastHg18KG,54 blastHg18KG,177 mrna,354 mrna,449 transMapEnsemblV5,166 transMapEstV5,135 transMapRefSeqV5,135 transMapRnaV5,135 transMapV5,125 transMapV5,149 transMapV5,156 transMapV5,241 xenoMrna,15 xenoMrna,428 xenoMrna,518 xenoRefGene,225 blat--the xenoRefGene,302 blocks chainDanRer7,44 chainDanRer7,639 chainDanRer7,660 chainFr3,44 chainFr3,639 chainFr3,660 chainGalGal6,44 chainGalGal6,639 chainGalGal6,660 chainGasAcu1,44 chainGasAcu1,639 chainGasAcu1,660 chainHg19,44 chainHg19,639 chainHg19,660 chainMm10,44 chainMm10,639 chainMm10,660 chainNetDanRer7,47 chainNetDanRer7,642 chainNetDanRer7,663 chainNetFr3,47 chainNetFr3,642 chainNetFr3,663 chainNetGalGal6,47 chainNetGalGal6,642 chainNetGalGal6,663 chainNetGasAcu1,47 chainNetGasAcu1,642 chainNetGasAcu1,663 chainNetHg19,47 chainNetHg19,642 chainNetHg19,663 chainNetMm10,47 chainNetMm10,642 chainNetMm10,663 chainNetOryLat2,49 chainNetOryLat2,648 chainNetOryLat2,669 chainOryLat2,46 chainOryLat2,645 chainOryLat2,666 gold,106 gold,119 gold,129 netDanRer7,44 netDanRer7,639 netDanRer7,660 netFr3,44 netFr3,639 netFr3,660 netGalGal6,44 netGalGal6,639 netGalGal6,660 netGasAcu1,44 netGasAcu1,639 netGasAcu1,660 netHg19,44 netHg19,639 netHg19,660 netMm10,44 netMm10,639 netMm10,660 netOryLat2,46 netOryLat2,645 netOryLat2,666 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 ensGene,131 blue unipAliSwissprot,11 unipAliSwissprot,15 uniprot,507 uniprot,583 bolchi tRNAs,474 bond uniprot,473 bonds unipDisulfBond,2 unipDisulfBond,5 uniprot,334 uniprot,336 both chainDanRer7,95 chainDanRer7,115 chainDanRer7,168 chainDanRer7,890 chainFr3,95 chainFr3,115 chainFr3,168 chainFr3,890 chainGalGal6,95 chainGalGal6,115 chainGalGal6,168 chainGalGal6,890 chainGasAcu1,95 chainGasAcu1,115 chainGasAcu1,168 chainGasAcu1,890 chainHg19,95 chainHg19,115 chainHg19,168 chainHg19,890 chainMm10,95 chainMm10,115 chainMm10,168 chainMm10,890 chainNetDanRer7,98 chainNetDanRer7,118 chainNetDanRer7,171 chainNetDanRer7,893 chainNetFr3,98 chainNetFr3,118 chainNetFr3,171 chainNetFr3,893 chainNetGalGal6,98 chainNetGalGal6,118 chainNetGalGal6,171 chainNetGalGal6,893 chainNetGasAcu1,98 chainNetGasAcu1,118 chainNetGasAcu1,171 chainNetGasAcu1,893 chainNetHg19,98 chainNetHg19,118 chainNetHg19,171 chainNetHg19,893 chainNetMm10,98 chainNetMm10,118 chainNetMm10,171 chainNetMm10,893 chainNetOryLat2,102 chainNetOryLat2,122 chainNetOryLat2,175 chainNetOryLat2,899 chainOryLat2,99 chainOryLat2,119 chainOryLat2,172 chainOryLat2,896 netDanRer7,95 netDanRer7,115 netDanRer7,168 netDanRer7,890 netFr3,95 netFr3,115 netFr3,168 netFr3,890 netGalGal6,95 netGalGal6,115 netGalGal6,168 netGalGal6,890 netGasAcu1,95 netGasAcu1,115 netGasAcu1,168 netGasAcu1,890 netHg19,95 netHg19,115 netHg19,168 netHg19,890 netMm10,95 netMm10,115 netMm10,168 netMm10,890 netOryLat2,99 netOryLat2,119 netOryLat2,172 netOryLat2,896 tRNAs,329 transMapEnsemblV5,509 transMapEstV5,478 transMapRefSeqV5,478 transMapRnaV5,478 transMapV5,584 uniprot,675 uniprot,1616 xenoRefGene,124 xenoRefGene,195 bothgap chainDanRer7,741 chainFr3,741 chainGalGal6,741 chainGasAcu1,741 chainHg19,741 chainMm10,741 chainNetDanRer7,744 chainNetFr3,744 chainNetGalGal6,744 chainNetGasAcu1,744 chainNetHg19,744 chainNetMm10,744 chainNetOryLat2,750 chainOryLat2,747 netDanRer7,741 netFr3,741 netGalGal6,741 netGasAcu1,741 netHg19,741 netMm10,741 netOryLat2,747 boundaries blastHg18KG,59 gold,80 box chainDanRer7,370 chainDanRer7,452 chainFr3,370 chainFr3,452 chainGalGal6,370 chainGalGal6,452 chainGasAcu1,370 chainGasAcu1,452 chainHg19,370 chainHg19,452 chainMm10,370 chainMm10,452 chainNetDanRer7,373 chainNetDanRer7,455 chainNetFr3,373 chainNetFr3,455 chainNetGalGal6,373 chainNetGalGal6,455 chainNetGasAcu1,373 chainNetGasAcu1,455 chainNetHg19,373 chainNetHg19,455 chainNetMm10,373 chainNetMm10,455 chainNetOryLat2,379 chainNetOryLat2,461 chainOryLat2,376 chainOryLat2,458 gap,59 mrna,152 mrna,163 mrna,203 netDanRer7,370 netDanRer7,452 netFr3,370 netFr3,452 netGalGal6,370 netGalGal6,452 netGasAcu1,370 netGasAcu1,452 netHg19,370 netHg19,452 netMm10,370 netMm10,452 netOryLat2,376 netOryLat2,458 tRNAs,37 xenoMrna,226 xenoMrna,237 xenoMrna,277 xenoRefGene,214 boxes chainDanRer7,121 chainDanRer7,131 chainDanRer7,441 chainFr3,121 chainFr3,131 chainFr3,441 chainGalGal6,121 chainGalGal6,131 chainGalGal6,441 chainGasAcu1,121 chainGasAcu1,131 chainGasAcu1,441 chainHg19,121 chainHg19,131 chainHg19,441 chainMm10,121 chainMm10,131 chainMm10,441 chainNetDanRer7,124 chainNetDanRer7,134 chainNetDanRer7,444 chainNetFr3,124 chainNetFr3,134 chainNetFr3,444 chainNetGalGal6,124 chainNetGalGal6,134 chainNetGalGal6,444 chainNetGasAcu1,124 chainNetGasAcu1,134 chainNetGasAcu1,444 chainNetHg19,124 chainNetHg19,134 chainNetHg19,444 chainNetMm10,124 chainNetMm10,134 chainNetMm10,444 chainNetOryLat2,128 chainNetOryLat2,138 chainNetOryLat2,450 chainOryLat2,125 chainOryLat2,135 chainOryLat2,447 gap,20 mrna,123 nestedRepeats,126 netDanRer7,121 netDanRer7,131 netDanRer7,441 netFr3,121 netFr3,131 netFr3,441 netGalGal6,121 netGalGal6,131 netGalGal6,441 netGasAcu1,121 netGasAcu1,131 netGasAcu1,441 netHg19,121 netHg19,131 netHg19,441 netMm10,121 netMm10,131 netMm10,441 netOryLat2,125 netOryLat2,135 netOryLat2,447 xenoMrna,197 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 branch transMapEnsemblV5,218 transMapEstV5,187 transMapRefSeqV5,187 transMapRnaV5,187 transMapV5,293 branch-point augustusGene,55 brejov transMapEnsemblV5,715 transMapEstV5,684 transMapRefSeqV5,684 transMapRnaV5,684 transMapV5,790 brian blastHg18KG,197 uniprot,1959 bridge gold,127 bridged gap,48 briefly uniprot,778 broad chainGasAcu1,6 chainGasAcu1,68 chainGasAcu1,302 chainNetGasAcu1,7 chainNetGasAcu1,71 chainNetGasAcu1,305 chainNetGasAcu1Viewchain,5 chainNetGasAcu1Viewnet,5 gold,295 netGasAcu1,6 netGasAcu1,68 netGasAcu1,302 brown gold,90 gold,105 xenoRefGene,319 browser chainDanRer7,970 chainFr3,970 chainGalGal6,970 chainGasAcu1,970 chainHg19,970 chainMm10,970 chainNetDanRer7,973 chainNetFr3,973 chainNetGalGal6,973 chainNetGasAcu1,973 chainNetHg19,973 chainNetMm10,973 chainNetOryLat2,979 chainOryLat2,976 cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 ensGene,67 gold,132 mrna,170 mrna,283 mrna,300 nestedRepeats,243 netDanRer7,970 netFr3,970 netGalGal6,970 netGasAcu1,970 netHg19,970 netMm10,970 netOryLat2,976 transMapEnsemblV5,37 transMapEnsemblV5,164 transMapEnsemblV5,530 transMapEstV5,35 transMapEstV5,133 transMapEstV5,499 transMapRefSeqV5,35 transMapRefSeqV5,133 transMapRefSeqV5,499 transMapRnaV5,35 transMapRnaV5,133 transMapRnaV5,499 transMapV5,34 transMapV5,239 transMapV5,605 uniprot,1544 uniprot,1721 xenoMrna,244 xenoMrna,357 xenoMrna,374 browsing uniprot,1662 bruccoleri tRNAs,353 build gold,232 uniprot,1552 builds transMapEnsemblV5,54 built augustusGene,51 augustusGene,67 burge genscan,22 genscan,146 genscan,166 genscan,173 genscan,180 genscan,207 burks tRNAs,419 but blastHg18KG,94 chainDanRer7,543 chainFr3,543 chainGalGal6,543 chainGasAcu1,543 chainHg19,543 chainMm10,543 chainNetDanRer7,546 chainNetFr3,546 chainNetGalGal6,546 chainNetGasAcu1,546 chainNetHg19,546 chainNetMm10,546 chainNetOryLat2,552 chainOryLat2,549 netDanRer7,543 netFr3,543 netGalGal6,543 netGasAcu1,543 netHg19,543 netMm10,543 netOryLat2,549 uniprot,638 uniprot,1047 button chainDanRer7,341 chainFr3,341 chainGalGal6,341 chainGasAcu1,341 chainHg19,341 chainMm10,341 chainNetDanRer7,344 chainNetFr3,344 chainNetGalGal6,344 chainNetGasAcu1,344 chainNetHg19,344 chainNetMm10,344 chainNetOryLat2,350 chainOryLat2,347 netDanRer7,341 netFr3,341 netGalGal6,341 netGasAcu1,341 netHg19,341 netMm10,341 netOryLat2,347 by augustusGene,147 augustusGene,266 augustusGene,282 blastHg18KG,6 blastHg18KG,180 blastHg18KG,193 chainDanRer7,108 chainDanRer7,124 chainDanRer7,311 chainDanRer7,374 chainDanRer7,411 chainDanRer7,429 chainDanRer7,807 chainDanRer7,919 chainDanRer7,938 chainDanRer7,958 chainDanRer7,982 chainDanRer7,1003 chainFr3,108 chainFr3,124 chainFr3,311 chainFr3,374 chainFr3,411 chainFr3,429 chainFr3,807 chainFr3,919 chainFr3,938 chainFr3,958 chainFr3,982 chainFr3,1003 chainGalGal6,108 chainGalGal6,124 chainGalGal6,311 chainGalGal6,374 chainGalGal6,411 chainGalGal6,429 chainGalGal6,807 chainGalGal6,919 chainGalGal6,938 chainGalGal6,958 chainGalGal6,982 chainGalGal6,1003 chainGasAcu1,108 chainGasAcu1,124 chainGasAcu1,311 chainGasAcu1,374 chainGasAcu1,411 chainGasAcu1,429 chainGasAcu1,807 chainGasAcu1,919 chainGasAcu1,938 chainGasAcu1,958 chainGasAcu1,982 chainGasAcu1,1003 chainHg19,108 chainHg19,124 chainHg19,311 chainHg19,374 chainHg19,411 chainHg19,429 chainHg19,807 chainHg19,919 chainHg19,938 chainHg19,958 chainHg19,982 chainHg19,1003 chainMm10,108 chainMm10,124 chainMm10,311 chainMm10,374 chainMm10,411 chainMm10,429 chainMm10,807 chainMm10,919 chainMm10,938 chainMm10,958 chainMm10,982 chainMm10,1003 chainNetDanRer7,111 chainNetDanRer7,127 chainNetDanRer7,314 chainNetDanRer7,377 chainNetDanRer7,414 chainNetDanRer7,432 chainNetDanRer7,810 chainNetDanRer7,922 chainNetDanRer7,941 chainNetDanRer7,961 chainNetDanRer7,985 chainNetDanRer7,1006 chainNetFr3,111 chainNetFr3,127 chainNetFr3,314 chainNetFr3,377 chainNetFr3,414 chainNetFr3,432 chainNetFr3,810 chainNetFr3,922 chainNetFr3,941 chainNetFr3,961 chainNetFr3,985 chainNetFr3,1006 chainNetGalGal6,111 chainNetGalGal6,127 chainNetGalGal6,314 chainNetGalGal6,377 chainNetGalGal6,414 chainNetGalGal6,432 chainNetGalGal6,810 chainNetGalGal6,922 chainNetGalGal6,941 chainNetGalGal6,961 chainNetGalGal6,985 chainNetGalGal6,1006 chainNetGasAcu1,111 chainNetGasAcu1,127 chainNetGasAcu1,314 chainNetGasAcu1,377 chainNetGasAcu1,414 chainNetGasAcu1,432 chainNetGasAcu1,810 chainNetGasAcu1,922 chainNetGasAcu1,941 chainNetGasAcu1,961 chainNetGasAcu1,985 chainNetGasAcu1,1006 chainNetHg19,111 chainNetHg19,127 chainNetHg19,314 chainNetHg19,377 chainNetHg19,414 chainNetHg19,432 chainNetHg19,810 chainNetHg19,922 chainNetHg19,941 chainNetHg19,961 chainNetHg19,985 chainNetHg19,1006 chainNetMm10,111 chainNetMm10,127 chainNetMm10,314 chainNetMm10,377 chainNetMm10,414 chainNetMm10,432 chainNetMm10,810 chainNetMm10,922 chainNetMm10,941 chainNetMm10,961 chainNetMm10,985 chainNetMm10,1006 chainNetOryLat2,115 chainNetOryLat2,131 chainNetOryLat2,320 chainNetOryLat2,383 chainNetOryLat2,420 chainNetOryLat2,438 chainNetOryLat2,816 chainNetOryLat2,928 chainNetOryLat2,947 chainNetOryLat2,967 chainNetOryLat2,991 chainNetOryLat2,1012 chainOryLat2,112 chainOryLat2,128 chainOryLat2,317 chainOryLat2,380 chainOryLat2,417 chainOryLat2,435 chainOryLat2,813 chainOryLat2,925 chainOryLat2,944 chainOryLat2,964 chainOryLat2,988 chainOryLat2,1009 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 ensGene,15 gap,41 gap,117 gap,140 gap,149 gap,170 gaze,24 gaze,89 gc5Base,81 genscan,20 genscan,88 genscan,121 gold,20 gold,83 gold,214 gold,282 microsat,110 mrna,417 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 netDanRer7,108 netDanRer7,124 netDanRer7,311 netDanRer7,374 netDanRer7,411 netDanRer7,429 netDanRer7,807 netDanRer7,919 netDanRer7,938 netDanRer7,958 netDanRer7,982 netDanRer7,1003 netFr3,108 netFr3,124 netFr3,311 netFr3,374 netFr3,411 netFr3,429 netFr3,807 netFr3,919 netFr3,938 netFr3,958 netFr3,982 netFr3,1003 netGalGal6,108 netGalGal6,124 netGalGal6,311 netGalGal6,374 netGalGal6,411 netGalGal6,429 netGalGal6,807 netGalGal6,919 netGalGal6,938 netGalGal6,958 netGalGal6,982 netGalGal6,1003 netGasAcu1,108 netGasAcu1,124 netGasAcu1,311 netGasAcu1,374 netGasAcu1,411 netGasAcu1,429 netGasAcu1,807 netGasAcu1,919 netGasAcu1,938 netGasAcu1,958 netGasAcu1,982 netGasAcu1,1003 netHg19,108 netHg19,124 netHg19,311 netHg19,374 netHg19,411 netHg19,429 netHg19,807 netHg19,919 netHg19,938 netHg19,958 netHg19,982 netHg19,1003 netMm10,108 netMm10,124 netMm10,311 netMm10,374 netMm10,411 netMm10,429 netMm10,807 netMm10,919 netMm10,938 netMm10,958 netMm10,982 netMm10,1003 netOryLat2,112 netOryLat2,128 netOryLat2,317 netOryLat2,380 netOryLat2,417 netOryLat2,435 netOryLat2,813 netOryLat2,925 netOryLat2,944 netOryLat2,964 netOryLat2,988 netOryLat2,1009 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 tRNAs,20 tRNAs,335 tRNAs,347 tRNAs,490 transMapEnsemblV5,23 transMapEnsemblV5,227 transMapEnsemblV5,395 transMapEnsemblV5,678 transMapEnsemblV5,696 transMapEnsemblV5,702 transMapEnsemblV5,740 transMapEstV5,21 transMapEstV5,196 transMapEstV5,364 transMapEstV5,647 transMapEstV5,665 transMapEstV5,671 transMapEstV5,709 transMapRefSeqV5,21 transMapRefSeqV5,196 transMapRefSeqV5,364 transMapRefSeqV5,647 transMapRefSeqV5,665 transMapRefSeqV5,671 transMapRefSeqV5,709 transMapRnaV5,21 transMapRnaV5,196 transMapRnaV5,364 transMapRnaV5,647 transMapRnaV5,665 transMapRnaV5,671 transMapRnaV5,709 transMapV5,20 transMapV5,302 transMapV5,470 transMapV5,753 transMapV5,771 transMapV5,777 transMapV5,815 uniprot,39 uniprot,49 uniprot,224 uniprot,713 uniprot,720 uniprot,818 uniprot,987 uniprot,995 uniprot,1015 uniprot,1028 uniprot,1045 uniprot,1538 uniprot,1764 uniprot,1943 windowmaskerSdust,6 windowmaskerSdust,20 xenoMrna,486 xenoRefGene,100 xenoRefGene,105 xenoRefGene,169 xenoRefGene,187 xenoRefGene,193 xenoRefGene,289 xenoRefGene,294 c cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5Base,23 genscan,181 genscan,208 tRNAs,349 tRNAs,420 transMapEnsemblV5,725 transMapEnsemblV5,731 transMapEstV5,694 transMapEstV5,700 transMapRefSeqV5,694 transMapRefSeqV5,700 transMapRnaV5,694 transMapRnaV5,700 transMapV5,800 transMapV5,806 windowmaskerSdust,30 c-114100-125-31 chainGasAcu1,669 chainNetGasAcu1,672 netGasAcu1,669 c-90100-100-25 chainDanRer7,669 chainFr3,669 chainGalGal6,669 chainHg19,669 chainMm10,669 chainNetDanRer7,672 chainNetFr3,672 chainNetGalGal6,672 chainNetHg19,672 chainNetMm10,672 chainNetOryLat2,678 chainOryLat2,675 netDanRer7,669 netFr3,669 netGalGal6,669 netHg19,669 netMm10,669 netOryLat2,675 caae01000000 gold,266 caae01000001-caae01025773 gold,270 caenorhabditis augustusGene,212 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 calibrated gaze,113 california chainDanRer7,954 chainDanRer7,1000 chainFr3,954 chainFr3,1000 chainGalGal6,954 chainGalGal6,1000 chainGasAcu1,954 chainGasAcu1,1000 chainHg19,954 chainHg19,1000 chainMm10,954 chainMm10,1000 chainNetDanRer7,957 chainNetDanRer7,1003 chainNetFr3,957 chainNetFr3,1003 chainNetGalGal6,957 chainNetGalGal6,1003 chainNetGasAcu1,957 chainNetGasAcu1,1003 chainNetHg19,957 chainNetHg19,1003 chainNetMm10,957 chainNetMm10,1003 chainNetOryLat2,963 chainNetOryLat2,1009 chainOryLat2,960 chainOryLat2,1006 netDanRer7,954 netDanRer7,1000 netFr3,954 netFr3,1000 netGalGal6,954 netGalGal6,1000 netGasAcu1,954 netGasAcu1,1000 netHg19,954 netHg19,1000 netMm10,954 netMm10,1000 netOryLat2,960 netOryLat2,1006 cameron ensGene,174 can augustusGene,98 chainDanRer7,90 chainDanRer7,105 chainFr3,90 chainFr3,105 chainGalGal6,90 chainGalGal6,105 chainGasAcu1,90 chainGasAcu1,105 chainHg19,90 chainHg19,105 chainMm10,90 chainMm10,105 chainNetDanRer7,93 chainNetDanRer7,108 chainNetFr3,93 chainNetFr3,108 chainNetGalGal6,93 chainNetGalGal6,108 chainNetGasAcu1,93 chainNetGasAcu1,108 chainNetHg19,93 chainNetHg19,108 chainNetMm10,93 chainNetMm10,108 chainNetOryLat2,97 chainNetOryLat2,112 chainOryLat2,94 chainOryLat2,109 cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 ensGene,60 ensGene,103 ensGene,137 mrna,65 mrna,196 netDanRer7,90 netDanRer7,105 netFr3,90 netFr3,105 netGalGal6,90 netGalGal6,105 netGasAcu1,90 netGasAcu1,105 netHg19,90 netHg19,105 netMm10,90 netMm10,105 netOryLat2,94 netOryLat2,109 simpleRepeat,35 transMapEnsemblV5,523 transMapEnsemblV5,552 transMapEnsemblV5,607 transMapEnsemblV5,615 transMapEnsemblV5,638 transMapEnsemblV5,644 transMapEstV5,492 transMapEstV5,521 transMapEstV5,576 transMapEstV5,584 transMapEstV5,607 transMapEstV5,613 transMapRefSeqV5,492 transMapRefSeqV5,521 transMapRefSeqV5,576 transMapRefSeqV5,584 transMapRefSeqV5,607 transMapRefSeqV5,613 transMapRnaV5,492 transMapRnaV5,521 transMapRnaV5,576 transMapRnaV5,584 transMapRnaV5,607 transMapRnaV5,613 transMapV5,598 transMapV5,627 transMapV5,682 transMapV5,690 transMapV5,713 transMapV5,719 uniprot,180 uniprot,656 uniprot,1064 uniprot,1093 uniprot,1104 uniprot,1326 uniprot,1555 uniprot,1693 uniprot,1714 uniprot,1739 uniprot,1749 uniprot,1758 uniprot,1769 uniprot,1792 uniprot,1798 uniprot,1881 xenoMrna,139 xenoMrna,270 xenoRefGene,85 candidates tRNAs,51 tRNAs,57 cannot uniprot,1269 carefully tRNAs,229 cases chainDanRer7,190 chainDanRer7,398 chainFr3,190 chainFr3,398 chainGalGal6,190 chainGalGal6,398 chainGasAcu1,190 chainGasAcu1,398 chainHg19,190 chainHg19,398 chainMm10,190 chainMm10,398 chainNetDanRer7,193 chainNetDanRer7,401 chainNetFr3,193 chainNetFr3,401 chainNetGalGal6,193 chainNetGalGal6,401 chainNetGasAcu1,193 chainNetGasAcu1,401 chainNetHg19,193 chainNetHg19,401 chainNetMm10,193 chainNetMm10,401 chainNetOryLat2,197 chainNetOryLat2,407 chainOryLat2,194 chainOryLat2,404 netDanRer7,190 netDanRer7,398 netFr3,190 netFr3,398 netGalGal6,190 netGalGal6,398 netGasAcu1,190 netGasAcu1,398 netHg19,190 netHg19,398 netMm10,190 netMm10,398 netOryLat2,194 netOryLat2,404 tRNAs,224 uniprot,757 uniprot,1183 uniprot,1452 cat uniprot,1936 categorized chainDanRer7,499 chainFr3,499 chainGalGal6,499 chainGasAcu1,499 chainHg19,499 chainMm10,499 chainNetDanRer7,502 chainNetFr3,502 chainNetGalGal6,502 chainNetGasAcu1,502 chainNetHg19,502 chainNetMm10,502 chainNetOryLat2,508 chainOryLat2,505 netDanRer7,499 netFr3,499 netGalGal6,499 netGasAcu1,499 netHg19,499 netMm10,499 netOryLat2,505 cauldron chainDanRer7,1052 chainFr3,1052 chainGalGal6,1052 chainGasAcu1,1052 chainHg19,1052 chainMm10,1052 chainNetDanRer7,1055 chainNetFr3,1055 chainNetGalGal6,1055 chainNetGasAcu1,1055 chainNetHg19,1055 chainNetMm10,1055 chainNetOryLat2,1061 chainOryLat2,1058 netDanRer7,1052 netFr3,1052 netGalGal6,1052 netGasAcu1,1052 netHg19,1052 netMm10,1052 netOryLat2,1058 cause chainDanRer7,481 chainFr3,481 chainGalGal6,481 chainGasAcu1,481 chainHg19,481 chainMm10,481 chainNetDanRer7,484 chainNetFr3,484 chainNetGalGal6,484 chainNetGasAcu1,484 chainNetHg19,484 chainNetMm10,484 chainNetOryLat2,490 chainOryLat2,487 netDanRer7,481 netFr3,481 netGalGal6,481 netGasAcu1,481 netHg19,481 netMm10,481 netOryLat2,487 caused chainDanRer7,107 chainFr3,107 chainGalGal6,107 chainGasAcu1,107 chainHg19,107 chainMm10,107 chainNetDanRer7,110 chainNetFr3,110 chainNetGalGal6,110 chainNetGasAcu1,110 chainNetHg19,110 chainNetMm10,110 chainNetOryLat2,114 chainOryLat2,111 netDanRer7,107 netFr3,107 netGalGal6,107 netGasAcu1,107 netHg19,107 netMm10,107 netOryLat2,111 cb transMapEnsemblV5,791 transMapEstV5,760 transMapRefSeqV5,760 transMapRnaV5,760 transMapV5,866 cdna augustusGene,299 transMapEnsemblV5,388 transMapEnsemblV5,684 transMapEnsemblV5,767 transMapEstV5,357 transMapEstV5,653 transMapEstV5,736 transMapRefSeqV5,357 transMapRefSeqV5,653 transMapRefSeqV5,736 transMapRnaV5,357 transMapRnaV5,653 transMapRnaV5,736 transMapV5,15 transMapV5,463 transMapV5,759 transMapV5,842 cdnas gaze,56 transMapEnsemblV5,124 transMapEstV5,93 transMapRefSeqV5,93 transMapRnaV5,93 transMapV5,199 cell uniprot,563 center gold,289 centromere gap,155 centromeres gap,158 cerevisiae augustusGene,222 certain nestedRepeats,294 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain chainDanRer7,2 chainDanRer7,27 chainDanRer7,57 chainDanRer7,60 chainDanRer7,118 chainDanRer7,268 chainDanRer7,309 chainDanRer7,404 chainDanRer7,459 chainDanRer7,563 chainDanRer7,767 chainDanRer7,810 chainDanRer7,821 chainDanRer7,829 chainDanRer7,834 chainDanRer7,857 chainDanRer7,866 chainFr3,2 chainFr3,27 chainFr3,57 chainFr3,60 chainFr3,118 chainFr3,268 chainFr3,309 chainFr3,404 chainFr3,459 chainFr3,563 chainFr3,767 chainFr3,810 chainFr3,821 chainFr3,829 chainFr3,834 chainFr3,857 chainFr3,866 chainGalGal6,2 chainGalGal6,27 chainGalGal6,57 chainGalGal6,60 chainGalGal6,118 chainGalGal6,268 chainGalGal6,309 chainGalGal6,404 chainGalGal6,459 chainGalGal6,563 chainGalGal6,767 chainGalGal6,810 chainGalGal6,821 chainGalGal6,829 chainGalGal6,834 chainGalGal6,857 chainGalGal6,866 chainGasAcu1,2 chainGasAcu1,27 chainGasAcu1,57 chainGasAcu1,60 chainGasAcu1,118 chainGasAcu1,268 chainGasAcu1,309 chainGasAcu1,404 chainGasAcu1,459 chainGasAcu1,563 chainGasAcu1,767 chainGasAcu1,810 chainGasAcu1,821 chainGasAcu1,829 chainGasAcu1,834 chainGasAcu1,857 chainGasAcu1,866 chainHg19,2 chainHg19,27 chainHg19,57 chainHg19,60 chainHg19,118 chainHg19,268 chainHg19,309 chainHg19,404 chainHg19,459 chainHg19,563 chainHg19,767 chainHg19,810 chainHg19,821 chainHg19,829 chainHg19,834 chainHg19,857 chainHg19,866 chainMm10,2 chainMm10,27 chainMm10,57 chainMm10,60 chainMm10,118 chainMm10,268 chainMm10,309 chainMm10,404 chainMm10,459 chainMm10,563 chainMm10,767 chainMm10,810 chainMm10,821 chainMm10,829 chainMm10,834 chainMm10,857 chainMm10,866 chainNetDanRer7,2 chainNetDanRer7,9 chainNetDanRer7,30 chainNetDanRer7,60 chainNetDanRer7,63 chainNetDanRer7,121 chainNetDanRer7,271 chainNetDanRer7,312 chainNetDanRer7,407 chainNetDanRer7,462 chainNetDanRer7,566 chainNetDanRer7,770 chainNetDanRer7,813 chainNetDanRer7,824 chainNetDanRer7,832 chainNetDanRer7,837 chainNetDanRer7,860 chainNetDanRer7,869 chainNetDanRer7Viewchain,1 chainNetDanRer7Viewchain,7 chainNetDanRer7Viewnet,7 chainNetFr3,2 chainNetFr3,9 chainNetFr3,30 chainNetFr3,60 chainNetFr3,63 chainNetFr3,121 chainNetFr3,271 chainNetFr3,312 chainNetFr3,407 chainNetFr3,462 chainNetFr3,566 chainNetFr3,770 chainNetFr3,813 chainNetFr3,824 chainNetFr3,832 chainNetFr3,837 chainNetFr3,860 chainNetFr3,869 chainNetFr3Viewchain,1 chainNetFr3Viewchain,7 chainNetFr3Viewnet,7 chainNetGalGal6,2 chainNetGalGal6,9 chainNetGalGal6,30 chainNetGalGal6,60 chainNetGalGal6,63 chainNetGalGal6,121 chainNetGalGal6,271 chainNetGalGal6,312 chainNetGalGal6,407 chainNetGalGal6,462 chainNetGalGal6,566 chainNetGalGal6,770 chainNetGalGal6,813 chainNetGalGal6,824 chainNetGalGal6,832 chainNetGalGal6,837 chainNetGalGal6,860 chainNetGalGal6,869 chainNetGalGal6Viewchain,1 chainNetGalGal6Viewchain,7 chainNetGalGal6Viewnet,7 chainNetGasAcu1,2 chainNetGasAcu1,9 chainNetGasAcu1,30 chainNetGasAcu1,60 chainNetGasAcu1,63 chainNetGasAcu1,121 chainNetGasAcu1,271 chainNetGasAcu1,312 chainNetGasAcu1,407 chainNetGasAcu1,462 chainNetGasAcu1,566 chainNetGasAcu1,770 chainNetGasAcu1,813 chainNetGasAcu1,824 chainNetGasAcu1,832 chainNetGasAcu1,837 chainNetGasAcu1,860 chainNetGasAcu1,869 chainNetGasAcu1Viewchain,1 chainNetGasAcu1Viewchain,7 chainNetGasAcu1Viewnet,7 chainNetHg19,2 chainNetHg19,9 chainNetHg19,30 chainNetHg19,60 chainNetHg19,63 chainNetHg19,121 chainNetHg19,271 chainNetHg19,312 chainNetHg19,407 chainNetHg19,462 chainNetHg19,566 chainNetHg19,770 chainNetHg19,813 chainNetHg19,824 chainNetHg19,832 chainNetHg19,837 chainNetHg19,860 chainNetHg19,869 chainNetHg19Viewchain,1 chainNetHg19Viewchain,7 chainNetHg19Viewnet,7 chainNetMm10,2 chainNetMm10,9 chainNetMm10,30 chainNetMm10,60 chainNetMm10,63 chainNetMm10,121 chainNetMm10,271 chainNetMm10,312 chainNetMm10,407 chainNetMm10,462 chainNetMm10,566 chainNetMm10,770 chainNetMm10,813 chainNetMm10,824 chainNetMm10,832 chainNetMm10,837 chainNetMm10,860 chainNetMm10,869 chainNetMm10Viewchain,1 chainNetMm10Viewchain,7 chainNetMm10Viewnet,7 chainNetOryLat2,2 chainNetOryLat2,11 chainNetOryLat2,32 chainNetOryLat2,62 chainNetOryLat2,65 chainNetOryLat2,125 chainNetOryLat2,275 chainNetOryLat2,318 chainNetOryLat2,413 chainNetOryLat2,468 chainNetOryLat2,572 chainNetOryLat2,776 chainNetOryLat2,819 chainNetOryLat2,830 chainNetOryLat2,838 chainNetOryLat2,843 chainNetOryLat2,866 chainNetOryLat2,875 chainNetOryLat2Viewchain,1 chainNetOryLat2Viewchain,9 chainNetOryLat2Viewnet,9 chainOryLat2,2 chainOryLat2,29 chainOryLat2,59 chainOryLat2,62 chainOryLat2,122 chainOryLat2,272 chainOryLat2,315 chainOryLat2,410 chainOryLat2,465 chainOryLat2,569 chainOryLat2,773 chainOryLat2,816 chainOryLat2,827 chainOryLat2,835 chainOryLat2,840 chainOryLat2,863 chainOryLat2,872 netDanRer7,27 netDanRer7,57 netDanRer7,60 netDanRer7,118 netDanRer7,268 netDanRer7,309 netDanRer7,404 netDanRer7,459 netDanRer7,563 netDanRer7,767 netDanRer7,810 netDanRer7,821 netDanRer7,829 netDanRer7,834 netDanRer7,857 netDanRer7,866 netFr3,27 netFr3,57 netFr3,60 netFr3,118 netFr3,268 netFr3,309 netFr3,404 netFr3,459 netFr3,563 netFr3,767 netFr3,810 netFr3,821 netFr3,829 netFr3,834 netFr3,857 netFr3,866 netGalGal6,27 netGalGal6,57 netGalGal6,60 netGalGal6,118 netGalGal6,268 netGalGal6,309 netGalGal6,404 netGalGal6,459 netGalGal6,563 netGalGal6,767 netGalGal6,810 netGalGal6,821 netGalGal6,829 netGalGal6,834 netGalGal6,857 netGalGal6,866 netGasAcu1,27 netGasAcu1,57 netGasAcu1,60 netGasAcu1,118 netGasAcu1,268 netGasAcu1,309 netGasAcu1,404 netGasAcu1,459 netGasAcu1,563 netGasAcu1,767 netGasAcu1,810 netGasAcu1,821 netGasAcu1,829 netGasAcu1,834 netGasAcu1,857 netGasAcu1,866 netHg19,27 netHg19,57 netHg19,60 netHg19,118 netHg19,268 netHg19,309 netHg19,404 netHg19,459 netHg19,563 netHg19,767 netHg19,810 netHg19,821 netHg19,829 netHg19,834 netHg19,857 netHg19,866 netMm10,27 netMm10,57 netMm10,60 netMm10,118 netMm10,268 netMm10,309 netMm10,404 netMm10,459 netMm10,563 netMm10,767 netMm10,810 netMm10,821 netMm10,829 netMm10,834 netMm10,857 netMm10,866 netOryLat2,29 netOryLat2,59 netOryLat2,62 netOryLat2,122 netOryLat2,272 netOryLat2,315 netOryLat2,410 netOryLat2,465 netOryLat2,569 netOryLat2,773 netOryLat2,816 netOryLat2,827 netOryLat2,835 netOryLat2,840 netOryLat2,863 netOryLat2,872 transMapV5,137 uniprot,290 chained blastHg18KG,7 blastHg18KG,86 chainDanRer7,8 chainFr3,8 chainGalGal6,8 chainGasAcu1,8 chainHg19,8 chainMm10,8 chainOryLat2,10 chainnet chainDanRer7,784 chainDanRer7,989 chainFr3,784 chainFr3,989 chainGalGal6,784 chainGalGal6,989 chainGasAcu1,784 chainGasAcu1,989 chainHg19,784 chainHg19,989 chainMm10,784 chainMm10,989 chainNetDanRer7,787 chainNetDanRer7,992 chainNetFr3,787 chainNetFr3,992 chainNetGalGal6,787 chainNetGalGal6,992 chainNetGasAcu1,787 chainNetGasAcu1,992 chainNetHg19,787 chainNetHg19,992 chainNetMm10,787 chainNetMm10,992 chainNetOryLat2,793 chainNetOryLat2,998 chainOryLat2,790 chainOryLat2,995 netDanRer7,784 netDanRer7,989 netFr3,784 netFr3,989 netGalGal6,784 netGalGal6,989 netGasAcu1,784 netGasAcu1,989 netHg19,784 netHg19,989 netMm10,784 netMm10,989 netOryLat2,790 netOryLat2,995 chains blastHg18KG,102 blastHg18KG,115 chainDanRer7,193 chainDanRer7,204 chainDanRer7,215 chainDanRer7,314 chainDanRer7,353 chainDanRer7,386 chainDanRer7,391 chainDanRer7,413 chainDanRer7,425 chainDanRer7,432 chainDanRer7,489 chainDanRer7,657 chainDanRer7,672 chainDanRer7,686 chainDanRer7,755 chainDanRer7,776 chainDanRer7,791 chainDanRer7,851 chainDanRer7,882 chainDanRer7,977 chainFr3,193 chainFr3,204 chainFr3,215 chainFr3,314 chainFr3,353 chainFr3,386 chainFr3,391 chainFr3,413 chainFr3,425 chainFr3,432 chainFr3,489 chainFr3,657 chainFr3,672 chainFr3,686 chainFr3,755 chainFr3,776 chainFr3,791 chainFr3,851 chainFr3,882 chainFr3,977 chainGalGal6,193 chainGalGal6,204 chainGalGal6,215 chainGalGal6,314 chainGalGal6,353 chainGalGal6,386 chainGalGal6,391 chainGalGal6,413 chainGalGal6,425 chainGalGal6,432 chainGalGal6,489 chainGalGal6,657 chainGalGal6,672 chainGalGal6,686 chainGalGal6,755 chainGalGal6,776 chainGalGal6,791 chainGalGal6,851 chainGalGal6,882 chainGalGal6,977 chainGasAcu1,193 chainGasAcu1,204 chainGasAcu1,215 chainGasAcu1,314 chainGasAcu1,353 chainGasAcu1,386 chainGasAcu1,391 chainGasAcu1,413 chainGasAcu1,425 chainGasAcu1,432 chainGasAcu1,489 chainGasAcu1,657 chainGasAcu1,672 chainGasAcu1,686 chainGasAcu1,755 chainGasAcu1,776 chainGasAcu1,791 chainGasAcu1,851 chainGasAcu1,882 chainGasAcu1,977 chainHg19,193 chainHg19,204 chainHg19,215 chainHg19,314 chainHg19,353 chainHg19,386 chainHg19,391 chainHg19,413 chainHg19,425 chainHg19,432 chainHg19,489 chainHg19,657 chainHg19,672 chainHg19,686 chainHg19,755 chainHg19,776 chainHg19,791 chainHg19,851 chainHg19,882 chainHg19,977 chainMm10,193 chainMm10,204 chainMm10,215 chainMm10,314 chainMm10,353 chainMm10,386 chainMm10,391 chainMm10,413 chainMm10,425 chainMm10,432 chainMm10,489 chainMm10,657 chainMm10,672 chainMm10,686 chainMm10,755 chainMm10,776 chainMm10,791 chainMm10,851 chainMm10,882 chainMm10,977 chainNetDanRer7,196 chainNetDanRer7,207 chainNetDanRer7,218 chainNetDanRer7,317 chainNetDanRer7,356 chainNetDanRer7,389 chainNetDanRer7,394 chainNetDanRer7,416 chainNetDanRer7,428 chainNetDanRer7,435 chainNetDanRer7,492 chainNetDanRer7,660 chainNetDanRer7,675 chainNetDanRer7,689 chainNetDanRer7,758 chainNetDanRer7,779 chainNetDanRer7,794 chainNetDanRer7,854 chainNetDanRer7,885 chainNetDanRer7,980 chainNetFr3,196 chainNetFr3,207 chainNetFr3,218 chainNetFr3,317 chainNetFr3,356 chainNetFr3,389 chainNetFr3,394 chainNetFr3,416 chainNetFr3,428 chainNetFr3,435 chainNetFr3,492 chainNetFr3,660 chainNetFr3,675 chainNetFr3,689 chainNetFr3,758 chainNetFr3,779 chainNetFr3,794 chainNetFr3,854 chainNetFr3,885 chainNetFr3,980 chainNetGalGal6,196 chainNetGalGal6,207 chainNetGalGal6,218 chainNetGalGal6,317 chainNetGalGal6,356 chainNetGalGal6,389 chainNetGalGal6,394 chainNetGalGal6,416 chainNetGalGal6,428 chainNetGalGal6,435 chainNetGalGal6,492 chainNetGalGal6,660 chainNetGalGal6,675 chainNetGalGal6,689 chainNetGalGal6,758 chainNetGalGal6,779 chainNetGalGal6,794 chainNetGalGal6,854 chainNetGalGal6,885 chainNetGalGal6,980 chainNetGasAcu1,196 chainNetGasAcu1,207 chainNetGasAcu1,218 chainNetGasAcu1,317 chainNetGasAcu1,356 chainNetGasAcu1,389 chainNetGasAcu1,394 chainNetGasAcu1,416 chainNetGasAcu1,428 chainNetGasAcu1,435 chainNetGasAcu1,492 chainNetGasAcu1,660 chainNetGasAcu1,675 chainNetGasAcu1,689 chainNetGasAcu1,758 chainNetGasAcu1,779 chainNetGasAcu1,794 chainNetGasAcu1,854 chainNetGasAcu1,885 chainNetGasAcu1,980 chainNetHg19,196 chainNetHg19,207 chainNetHg19,218 chainNetHg19,317 chainNetHg19,356 chainNetHg19,389 chainNetHg19,394 chainNetHg19,416 chainNetHg19,428 chainNetHg19,435 chainNetHg19,492 chainNetHg19,660 chainNetHg19,675 chainNetHg19,689 chainNetHg19,758 chainNetHg19,779 chainNetHg19,794 chainNetHg19,854 chainNetHg19,885 chainNetHg19,980 chainNetMm10,196 chainNetMm10,207 chainNetMm10,218 chainNetMm10,317 chainNetMm10,356 chainNetMm10,389 chainNetMm10,394 chainNetMm10,416 chainNetMm10,428 chainNetMm10,435 chainNetMm10,492 chainNetMm10,660 chainNetMm10,675 chainNetMm10,689 chainNetMm10,758 chainNetMm10,779 chainNetMm10,794 chainNetMm10,854 chainNetMm10,885 chainNetMm10,980 chainNetOryLat2,200 chainNetOryLat2,211 chainNetOryLat2,222 chainNetOryLat2,323 chainNetOryLat2,362 chainNetOryLat2,395 chainNetOryLat2,400 chainNetOryLat2,422 chainNetOryLat2,434 chainNetOryLat2,441 chainNetOryLat2,498 chainNetOryLat2,666 chainNetOryLat2,681 chainNetOryLat2,695 chainNetOryLat2,764 chainNetOryLat2,785 chainNetOryLat2,800 chainNetOryLat2,860 chainNetOryLat2,891 chainNetOryLat2,986 chainOryLat2,197 chainOryLat2,208 chainOryLat2,219 chainOryLat2,320 chainOryLat2,359 chainOryLat2,392 chainOryLat2,397 chainOryLat2,419 chainOryLat2,431 chainOryLat2,438 chainOryLat2,495 chainOryLat2,663 chainOryLat2,678 chainOryLat2,692 chainOryLat2,761 chainOryLat2,782 chainOryLat2,797 chainOryLat2,857 chainOryLat2,888 chainOryLat2,983 netDanRer7,193 netDanRer7,204 netDanRer7,215 netDanRer7,314 netDanRer7,353 netDanRer7,386 netDanRer7,391 netDanRer7,413 netDanRer7,425 netDanRer7,432 netDanRer7,489 netDanRer7,657 netDanRer7,672 netDanRer7,686 netDanRer7,755 netDanRer7,776 netDanRer7,791 netDanRer7,851 netDanRer7,882 netDanRer7,977 netFr3,193 netFr3,204 netFr3,215 netFr3,314 netFr3,353 netFr3,386 netFr3,391 netFr3,413 netFr3,425 netFr3,432 netFr3,489 netFr3,657 netFr3,672 netFr3,686 netFr3,755 netFr3,776 netFr3,791 netFr3,851 netFr3,882 netFr3,977 netGalGal6,193 netGalGal6,204 netGalGal6,215 netGalGal6,314 netGalGal6,353 netGalGal6,386 netGalGal6,391 netGalGal6,413 netGalGal6,425 netGalGal6,432 netGalGal6,489 netGalGal6,657 netGalGal6,672 netGalGal6,686 netGalGal6,755 netGalGal6,776 netGalGal6,791 netGalGal6,851 netGalGal6,882 netGalGal6,977 netGasAcu1,193 netGasAcu1,204 netGasAcu1,215 netGasAcu1,314 netGasAcu1,353 netGasAcu1,386 netGasAcu1,391 netGasAcu1,413 netGasAcu1,425 netGasAcu1,432 netGasAcu1,489 netGasAcu1,657 netGasAcu1,672 netGasAcu1,686 netGasAcu1,755 netGasAcu1,776 netGasAcu1,791 netGasAcu1,851 netGasAcu1,882 netGasAcu1,977 netHg19,193 netHg19,204 netHg19,215 netHg19,314 netHg19,353 netHg19,386 netHg19,391 netHg19,413 netHg19,425 netHg19,432 netHg19,489 netHg19,657 netHg19,672 netHg19,686 netHg19,755 netHg19,776 netHg19,791 netHg19,851 netHg19,882 netHg19,977 netMm10,193 netMm10,204 netMm10,215 netMm10,314 netMm10,353 netMm10,386 netMm10,391 netMm10,413 netMm10,425 netMm10,432 netMm10,489 netMm10,657 netMm10,672 netMm10,686 netMm10,755 netMm10,776 netMm10,791 netMm10,851 netMm10,882 netMm10,977 netOryLat2,197 netOryLat2,208 netOryLat2,219 netOryLat2,320 netOryLat2,359 netOryLat2,392 netOryLat2,397 netOryLat2,419 netOryLat2,431 netOryLat2,438 netOryLat2,495 netOryLat2,663 netOryLat2,678 netOryLat2,692 netOryLat2,761 netOryLat2,782 netOryLat2,797 netOryLat2,857 netOryLat2,888 netOryLat2,983 transMapEnsemblV5,80 transMapEnsemblV5,197 transMapEnsemblV5,210 transMapEnsemblV5,256 transMapEnsemblV5,281 transMapEnsemblV5,329 transMapEnsemblV5,510 transMapEstV5,49 transMapEstV5,166 transMapEstV5,179 transMapEstV5,225 transMapEstV5,250 transMapEstV5,298 transMapEstV5,479 transMapRefSeqV5,49 transMapRefSeqV5,166 transMapRefSeqV5,179 transMapRefSeqV5,225 transMapRefSeqV5,250 transMapRefSeqV5,298 transMapRefSeqV5,479 transMapRnaV5,49 transMapRnaV5,166 transMapRnaV5,179 transMapRnaV5,225 transMapRnaV5,250 transMapRnaV5,298 transMapRnaV5,479 transMapV5,50 transMapV5,86 transMapV5,272 transMapV5,285 transMapV5,331 transMapV5,356 transMapV5,404 transMapV5,585 unipChain,1 unipChain,7 uniprot,288 chan tRNAs,366 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 mrna,69 xenoMrna,143 changed uniprot,1382 characteristic mrna,263 xenoMrna,337 check chainDanRer7,336 chainFr3,336 chainGalGal6,336 chainGasAcu1,336 chainHg19,336 chainMm10,336 chainNetDanRer7,339 chainNetFr3,339 chainNetGalGal6,339 chainNetGasAcu1,339 chainNetHg19,339 chainNetMm10,339 chainNetOryLat2,345 chainOryLat2,342 netDanRer7,336 netFr3,336 netGalGal6,336 netGasAcu1,336 netHg19,336 netMm10,336 netOryLat2,342 checkbox uniprot,231 chen ensGene,176 chiaromonte chainDanRer7,1022 chainFr3,1022 chainGalGal6,1022 chainGasAcu1,1022 chainHg19,1022 chainMm10,1022 chainNetDanRer7,1025 chainNetFr3,1025 chainNetGalGal6,1025 chainNetGasAcu1,1025 chainNetHg19,1025 chainNetMm10,1025 chainNetOryLat2,1031 chainOryLat2,1028 netDanRer7,1022 netFr3,1022 netGalGal6,1022 netGasAcu1,1022 netHg19,1022 netMm10,1022 netOryLat2,1028 chicken augustusGene,204 augustusGene,262 chainGalGal6,1 chainGalGal6,3 chainGalGal6,65 chainGalGal6,96 chainGalGal6,148 chainGalGal6,266 chainGalGal6,291 chainGalGal6,572 chainGalGal6,620 chainNetGalGal6,1 chainNetGalGal6,4 chainNetGalGal6,68 chainNetGalGal6,99 chainNetGalGal6,151 chainNetGalGal6,269 chainNetGalGal6,294 chainNetGalGal6,575 chainNetGalGal6,623 chainNetGalGal6Viewchain,2 chainNetGalGal6Viewnet,2 netGalGal6,1 netGalGal6,3 netGalGal6,65 netGalGal6,96 netGalGal6,148 netGalGal6,266 netGalGal6,291 netGalGal6,572 netGalGal6,620 chmod uniprot,1921 choose augustusGene,171 cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 mrna,219 mrna,258 uniprot,657 xenoMrna,293 xenoMrna,332 chosen mrna,281 xenoMrna,355 chothia gaze,75 chr4 chainDanRer7,368 chainFr3,368 chainGalGal6,368 chainGasAcu1,368 chainHg19,368 chainMm10,368 chainNetDanRer7,371 chainNetFr3,371 chainNetGalGal6,371 chainNetGasAcu1,371 chainNetHg19,371 chainNetMm10,371 chainNetOryLat2,377 chainOryLat2,374 netDanRer7,368 netFr3,368 netGalGal6,368 netGasAcu1,368 netHg19,368 netMm10,368 netOryLat2,374 chr6 transMapEnsemblV5,667 transMapEstV5,636 transMapRefSeqV5,636 transMapRnaV5,636 transMapV5,742 uniprot,1820 chris genscan,21 genscan,172 uniprot,1954 chrom transMapEnsemblV5,666 transMapEstV5,635 transMapRefSeqV5,635 transMapRnaV5,635 transMapV5,741 uniprot,1819 chromosome chainDanRer7,245 chainDanRer7,323 chainDanRer7,348 chainDanRer7,356 chainDanRer7,366 chainDanRer7,375 chainDanRer7,522 chainDanRer7,537 chainDanRer7,553 chainDanRer7,621 chainDanRer7,626 chainFr3,245 chainFr3,323 chainFr3,348 chainFr3,356 chainFr3,366 chainFr3,375 chainFr3,522 chainFr3,537 chainFr3,553 chainFr3,621 chainFr3,626 chainGalGal6,245 chainGalGal6,323 chainGalGal6,348 chainGalGal6,356 chainGalGal6,366 chainGalGal6,375 chainGalGal6,522 chainGalGal6,537 chainGalGal6,553 chainGalGal6,621 chainGalGal6,626 chainGasAcu1,245 chainGasAcu1,323 chainGasAcu1,348 chainGasAcu1,356 chainGasAcu1,366 chainGasAcu1,375 chainGasAcu1,522 chainGasAcu1,537 chainGasAcu1,553 chainGasAcu1,621 chainGasAcu1,626 chainHg19,245 chainHg19,323 chainHg19,348 chainHg19,356 chainHg19,366 chainHg19,375 chainHg19,522 chainHg19,537 chainHg19,553 chainHg19,621 chainHg19,626 chainMm10,245 chainMm10,323 chainMm10,348 chainMm10,356 chainMm10,366 chainMm10,375 chainMm10,522 chainMm10,537 chainMm10,553 chainMm10,621 chainMm10,626 chainNetDanRer7,248 chainNetDanRer7,326 chainNetDanRer7,351 chainNetDanRer7,359 chainNetDanRer7,369 chainNetDanRer7,378 chainNetDanRer7,525 chainNetDanRer7,540 chainNetDanRer7,556 chainNetDanRer7,624 chainNetDanRer7,629 chainNetFr3,248 chainNetFr3,326 chainNetFr3,351 chainNetFr3,359 chainNetFr3,369 chainNetFr3,378 chainNetFr3,525 chainNetFr3,540 chainNetFr3,556 chainNetFr3,624 chainNetFr3,629 chainNetGalGal6,248 chainNetGalGal6,326 chainNetGalGal6,351 chainNetGalGal6,359 chainNetGalGal6,369 chainNetGalGal6,378 chainNetGalGal6,525 chainNetGalGal6,540 chainNetGalGal6,556 chainNetGalGal6,624 chainNetGalGal6,629 chainNetGasAcu1,248 chainNetGasAcu1,326 chainNetGasAcu1,351 chainNetGasAcu1,359 chainNetGasAcu1,369 chainNetGasAcu1,378 chainNetGasAcu1,525 chainNetGasAcu1,540 chainNetGasAcu1,556 chainNetGasAcu1,624 chainNetGasAcu1,629 chainNetHg19,248 chainNetHg19,326 chainNetHg19,351 chainNetHg19,359 chainNetHg19,369 chainNetHg19,378 chainNetHg19,525 chainNetHg19,540 chainNetHg19,556 chainNetHg19,624 chainNetHg19,629 chainNetMm10,248 chainNetMm10,326 chainNetMm10,351 chainNetMm10,359 chainNetMm10,369 chainNetMm10,378 chainNetMm10,525 chainNetMm10,540 chainNetMm10,556 chainNetMm10,624 chainNetMm10,629 chainNetOryLat2,252 chainNetOryLat2,332 chainNetOryLat2,357 chainNetOryLat2,365 chainNetOryLat2,375 chainNetOryLat2,384 chainNetOryLat2,531 chainNetOryLat2,546 chainNetOryLat2,562 chainNetOryLat2,630 chainNetOryLat2,635 chainOryLat2,249 chainOryLat2,329 chainOryLat2,354 chainOryLat2,362 chainOryLat2,372 chainOryLat2,381 chainOryLat2,528 chainOryLat2,543 chainOryLat2,559 chainOryLat2,627 chainOryLat2,632 cytoBandIdeo,1 gold,154 netDanRer7,245 netDanRer7,323 netDanRer7,348 netDanRer7,356 netDanRer7,366 netDanRer7,375 netDanRer7,522 netDanRer7,537 netDanRer7,553 netDanRer7,621 netDanRer7,626 netFr3,245 netFr3,323 netFr3,348 netFr3,356 netFr3,366 netFr3,375 netFr3,522 netFr3,537 netFr3,553 netFr3,621 netFr3,626 netGalGal6,245 netGalGal6,323 netGalGal6,348 netGalGal6,356 netGalGal6,366 netGalGal6,375 netGalGal6,522 netGalGal6,537 netGalGal6,553 netGalGal6,621 netGalGal6,626 netGasAcu1,245 netGasAcu1,323 netGasAcu1,348 netGasAcu1,356 netGasAcu1,366 netGasAcu1,375 netGasAcu1,522 netGasAcu1,537 netGasAcu1,553 netGasAcu1,621 netGasAcu1,626 netHg19,245 netHg19,323 netHg19,348 netHg19,356 netHg19,366 netHg19,375 netHg19,522 netHg19,537 netHg19,553 netHg19,621 netHg19,626 netMm10,245 netMm10,323 netMm10,348 netMm10,356 netMm10,366 netMm10,375 netMm10,522 netMm10,537 netMm10,553 netMm10,621 netMm10,626 netOryLat2,249 netOryLat2,329 netOryLat2,354 netOryLat2,362 netOryLat2,372 netOryLat2,381 netOryLat2,528 netOryLat2,543 netOryLat2,559 netOryLat2,627 netOryLat2,632 uniprot,1416 chromosome-based chainDanRer7,316 chainFr3,316 chainGalGal6,316 chainGasAcu1,316 chainHg19,316 chainMm10,316 chainNetDanRer7,319 chainNetFr3,319 chainNetGalGal6,319 chainNetGasAcu1,319 chainNetHg19,319 chainNetMm10,319 chainNetOryLat2,325 chainOryLat2,322 netDanRer7,316 netFr3,316 netGalGal6,316 netGasAcu1,316 netHg19,316 netMm10,316 netOryLat2,322 chromosomes gold,139 gold,142 gold,240 chrun_random gold,160 cite tRNAs,362 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 cl transMapEnsemblV5,723 transMapEstV5,692 transMapRefSeqV5,692 transMapRnaV5,692 transMapV5,798 clark ensGene,178 clawson gc5Base,83 cleaved uniprot,249 click chainDanRer7,449 chainDanRer7,463 chainFr3,449 chainFr3,463 chainGalGal6,449 chainGalGal6,463 chainGasAcu1,449 chainGasAcu1,463 chainHg19,449 chainHg19,463 chainMm10,449 chainMm10,463 chainNetDanRer7,452 chainNetDanRer7,466 chainNetFr3,452 chainNetFr3,466 chainNetGalGal6,452 chainNetGalGal6,466 chainNetGasAcu1,452 chainNetGasAcu1,466 chainNetHg19,452 chainNetHg19,466 chainNetMm10,452 chainNetMm10,466 chainNetOryLat2,458 chainNetOryLat2,472 chainOryLat2,455 chainOryLat2,469 gc5Base,56 mrna,341 netDanRer7,449 netDanRer7,463 netFr3,449 netFr3,463 netGalGal6,449 netGalGal6,463 netGasAcu1,449 netGasAcu1,463 netHg19,449 netHg19,463 netMm10,449 netMm10,463 netOryLat2,455 netOryLat2,469 transMapEnsemblV5,135 transMapEnsemblV5,149 transMapEstV5,104 transMapEstV5,118 transMapRefSeqV5,104 transMapRefSeqV5,118 transMapRnaV5,104 transMapRnaV5,118 transMapV5,210 transMapV5,224 uniprot,229 uniprot,481 uniprot,1673 xenoMrna,415 xenoRefGene,108 xenoRefGene,212 clicking uniprot,1633 clipped nestedRepeats,224 clone gold,79 closer transMapEnsemblV5,68 transMapEstV5,37 transMapRefSeqV5,37 transMapRnaV5,37 transMapV5,36 closest augustusGene,241 cloverleaf tRNAs,312 cm xenoRefGene,330 code transMapEnsemblV5,621 transMapEnsemblV5,635 transMapEstV5,590 transMapEstV5,604 transMapRefSeqV5,590 transMapRefSeqV5,604 transMapRnaV5,590 transMapRnaV5,604 transMapV5,696 transMapV5,710 uniprot,1546 uniprot,1775 uniprot,1789 windowmaskerSdust,34 coding simpleRepeat,38 uniprot,1102 uniprot,1133 xenoRefGene,210 codon genscan,100 genscan,122 mrna,319 transMapEnsemblV5,113 transMapEstV5,82 transMapRefSeqV5,82 transMapRnaV5,82 transMapV5,188 xenoMrna,393 xenoRefGene,136 xenoRefGene,143 xenoRefGene,158 xenoRefGene,188 codons genscan,89 genscan,93 xenoRefGene,163 xenoRefGene,170 cognate transMapEnsemblV5,179 transMapEstV5,148 transMapRefSeqV5,148 transMapRnaV5,148 transMapV5,254 coiled-coil uniprot,367 collaboration gold,284 collapsed nestedRepeats,173 collection xenoRefGene,31 color chainDanRer7,344 chainFr3,344 chainGalGal6,344 chainGasAcu1,344 chainHg19,344 chainMm10,344 chainNetDanRer7,347 chainNetFr3,347 chainNetGalGal6,347 chainNetGasAcu1,347 chainNetHg19,347 chainNetMm10,347 chainNetOryLat2,353 chainOryLat2,350 genscan,86 genscan,96 mrna,75 mrna,260 netDanRer7,344 netFr3,344 netGalGal6,344 netGasAcu1,344 netHg19,344 netMm10,344 netOryLat2,350 xenoMrna,149 xenoMrna,334 xenoRefGene,56 xenoRefGene,167 coloration gold,91 colored chainDanRer7,319 chainFr3,319 chainGalGal6,319 chainGasAcu1,319 chainHg19,319 chainMm10,319 chainNetDanRer7,322 chainNetFr3,322 chainNetGalGal6,322 chainNetGasAcu1,322 chainNetHg19,322 chainNetMm10,322 chainNetOryLat2,328 chainOryLat2,325 netDanRer7,319 netFr3,319 netGalGal6,319 netGasAcu1,319 netHg19,319 netMm10,319 netOryLat2,325 transMapEnsemblV5,145 transMapEstV5,114 transMapRefSeqV5,114 transMapRnaV5,114 transMapV5,220 uniprot,160 uniprot,176 coloring chainDanRer7,335 chainFr3,335 chainGalGal6,335 chainGasAcu1,335 chainHg19,335 chainMm10,335 chainNetDanRer7,338 chainNetFr3,338 chainNetGalGal6,338 chainNetGasAcu1,338 chainNetHg19,338 chainNetMm10,338 chainNetOryLat2,344 chainOryLat2,341 genscan,116 mrna,320 netDanRer7,335 netFr3,335 netGalGal6,335 netGasAcu1,335 netHg19,335 netMm10,335 netOryLat2,341 transMapEnsemblV5,114 transMapEstV5,83 transMapRefSeqV5,83 transMapRnaV5,83 transMapV5,189 xenoMrna,394 xenoRefGene,137 xenoRefGene,144 xenoRefGene,182 colors xenoRefGene,79 xenoRefGene,159 column nestedRepeats,107 columns transMapEnsemblV5,550 transMapEstV5,519 transMapRefSeqV5,519 transMapRnaV5,519 transMapV5,625 combination mrna,222 xenoMrna,296 combinations xenoMrna,118 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 transMapEnsemblV5,254 transMapEstV5,223 transMapRefSeqV5,223 transMapRnaV5,223 transMapV5,329 uniprot,1871 uniprot,1875 commands uniprot,1902 comment uniprot,260 uniprot,282 uniprot,531 uniprot,615 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 comparative chainDanRer7,10 chainFr3,10 chainGalGal6,10 chainGasAcu1,10 chainHg19,10 chainMm10,10 chainNetDanRer7,13 chainNetDanRer7Viewchain,11 chainNetDanRer7Viewnet,11 chainNetFr3,13 chainNetFr3Viewchain,11 chainNetFr3Viewnet,11 chainNetGalGal6,13 chainNetGalGal6Viewchain,11 chainNetGalGal6Viewnet,11 chainNetGasAcu1,13 chainNetGasAcu1Viewchain,11 chainNetGasAcu1Viewnet,11 chainNetHg19,13 chainNetHg19Viewchain,11 chainNetHg19Viewnet,11 chainNetMm10,13 chainNetMm10Viewchain,11 chainNetMm10Viewnet,11 chainNetOryLat2,15 chainNetOryLat2Viewchain,13 chainNetOryLat2Viewnet,13 chainOryLat2,12 netDanRer7,10 netFr3,10 netGalGal6,10 netGasAcu1,10 netHg19,10 netMm10,10 netOryLat2,12 transMapEnsemblV5,741 transMapEnsemblV5,796 transMapEstV5,710 transMapEstV5,765 transMapRefSeqV5,710 transMapRefSeqV5,765 transMapRnaV5,710 transMapRnaV5,765 transMapV5,816 transMapV5,871 compare mrna,329 transMapEnsemblV5,123 transMapEstV5,92 transMapRefSeqV5,92 transMapRnaV5,92 transMapV5,198 xenoMrna,403 xenoRefGene,153 compared transMapV5,153 comparison genscan,109 uniprot,1260 compiled transMapEnsemblV5,617 transMapEstV5,586 transMapRefSeqV5,586 transMapRnaV5,586 transMapV5,692 uniprot,1771 complete genscan,213 completely uniprot,1464 xenoRefGene,135 complex chainDanRer7,161 chainFr3,161 chainGalGal6,161 chainGasAcu1,161 chainHg19,161 chainMm10,161 chainNetDanRer7,164 chainNetFr3,164 chainNetGalGal6,164 chainNetGasAcu1,164 chainNetHg19,164 chainNetMm10,164 chainNetOryLat2,168 chainOryLat2,165 netDanRer7,161 netFr3,161 netGalGal6,161 netGasAcu1,161 netHg19,161 netMm10,161 netOryLat2,165 complexity nestedRepeats,40 components gold,162 composed uniprot,1396 compositional genscan,41 uniprot,399 comput transMapEnsemblV5,809 transMapEstV5,778 transMapRefSeqV5,778 transMapRnaV5,778 transMapV5,884 computational genscan,196 uniprot,51 computed gaze,30 transMapEnsemblV5,226 transMapEstV5,195 transMapRefSeqV5,195 transMapRnaV5,195 transMapV5,301 comstock transMapEnsemblV5,722 transMapEstV5,691 transMapRefSeqV5,691 transMapRnaV5,691 transMapV5,797 conditional augustusGene,118 configuration chainDanRer7,308 chainFr3,308 chainGalGal6,308 chainGasAcu1,308 chainHg19,308 chainMm10,308 chainNetDanRer7,311 chainNetFr3,311 chainNetGalGal6,311 chainNetGasAcu1,311 chainNetHg19,311 chainNetMm10,311 chainNetOryLat2,317 chainOryLat2,314 gc5Base,60 gc5Base,69 genscan,64 genscan,84 mrna,28 nestedRepeats,114 netDanRer7,308 netFr3,308 netGalGal6,308 netGasAcu1,308 netHg19,308 netMm10,308 netOryLat2,314 transMapEnsemblV5,94 transMapEstV5,63 transMapRefSeqV5,63 transMapRnaV5,63 transMapV5,169 uniprot,235 uniprot,449 uniprot,650 uniprot,1755 xenoMrna,32 xenoRefGene,44 configured gc5Base,42 mrna,316 transMapEnsemblV5,110 transMapEstV5,79 transMapRefSeqV5,79 transMapRnaV5,79 transMapV5,185 xenoMrna,390 xenoRefGene,87 conflicts unipConflict,2 unipConflict,5 uniprot,373 connect uniprot,1677 conservation transMapEnsemblV5,230 transMapEstV5,199 transMapRefSeqV5,199 transMapRnaV5,199 transMapV5,305 consistency uniprot,402 consisting gold,267 consortium uniprot,1986 constructed cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 gold,179 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 consult mrna,164 xenoMrna,238 contact uniprot,686 uniprot,1440 contain transMapV5,14 uniprot,1163 contained chainDanRer7,883 chainFr3,883 chainGalGal6,883 chainGasAcu1,883 chainHg19,883 chainMm10,883 chainNetDanRer7,886 chainNetFr3,886 chainNetGalGal6,886 chainNetGasAcu1,886 chainNetHg19,886 chainNetMm10,886 chainNetOryLat2,892 chainOryLat2,889 netDanRer7,883 netFr3,883 netGalGal6,883 netGasAcu1,883 netHg19,883 netMm10,883 netOryLat2,889 containing transMapEnsemblV5,545 transMapEstV5,514 transMapRefSeqV5,514 transMapRnaV5,514 transMapV5,620 contains blastHg18KG,16 gap,65 gold,34 gold,197 mrna,189 transMapEnsemblV5,17 transMapEstV5,15 transMapRefSeqV5,16 transMapRnaV5,16 xenoMrna,263 xenoRefGene,140 content augustusGene,71 cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5Base,31 conterio tRNAs,472 context gap,85 contig gap,72 gap,87 contigs gap,32 gap,79 gap,101 control tRNAs,498 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 xenoRefGene,90 convenience uniprot,404 conventions chainDanRer7,306 chainFr3,306 chainGalGal6,306 chainGasAcu1,306 chainHg19,306 chainMm10,306 chainNetDanRer7,309 chainNetFr3,309 chainNetGalGal6,309 chainNetGasAcu1,309 chainNetHg19,309 chainNetMm10,309 chainNetOryLat2,315 chainOryLat2,312 genscan,62 genscan,70 mrna,26 mrna,34 nestedRepeats,112 netDanRer7,306 netFr3,306 netGalGal6,306 netGasAcu1,306 netHg19,306 netMm10,306 netOryLat2,312 transMapEnsemblV5,92 transMapEnsemblV5,100 transMapEstV5,61 transMapEstV5,69 transMapRefSeqV5,61 transMapRefSeqV5,69 transMapRnaV5,61 transMapRnaV5,69 transMapV5,167 transMapV5,175 uniprot,447 xenoMrna,30 xenoMrna,38 xenoRefGene,42 xenoRefGene,50 converted chainDanRer7,598 chainFr3,598 chainGalGal6,598 chainGasAcu1,598 chainHg19,598 chainMm10,598 chainNetDanRer7,601 chainNetFr3,601 chainNetGalGal6,601 chainNetGasAcu1,601 chainNetHg19,601 chainNetMm10,601 chainNetOryLat2,607 chainOryLat2,604 netDanRer7,598 netFr3,598 netGalGal6,598 netGasAcu1,598 netHg19,598 netMm10,598 netOryLat2,604 uniprot,1477 uniprot,1760 coordinates uniprot,29 uniprot,643 uniprot,1848 uniprot,1855 uniprot,1886 uniprot,1892 copies microsat,80 copy uniprot,419 correct uniprot,962 uniprot,1222 corresponding transMapEnsemblV5,257 transMapEstV5,226 transMapRefSeqV5,226 transMapRnaV5,226 transMapV5,332 corresponds mrna,172 xenoMrna,246 could gap,163 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 covariance tRNAs,60 tRNAs,402 cove tRNAs,64 cove-predicted tRNAs,341 coverage gold,29 gold,191 uniprot,1485 covered chainDanRer7,806 chainFr3,806 chainGalGal6,806 chainGasAcu1,806 chainHg19,806 chainMm10,806 chainNetDanRer7,809 chainNetFr3,809 chainNetGalGal6,809 chainNetGasAcu1,809 chainNetHg19,809 chainNetMm10,809 chainNetOryLat2,815 chainOryLat2,812 netDanRer7,806 netFr3,806 netGalGal6,806 netGasAcu1,806 netHg19,806 netMm10,806 netOryLat2,812 covers gold,44 gold,219 cow transMapEnsemblV5,448 transMapEstV5,417 transMapRefSeqV5,417 transMapRnaV5,417 transMapV5,523 cox ensGene,180 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 create gold,75 windowmaskerSdust,48 created chainDanRer7,981 chainFr3,981 chainGalGal6,981 chainGasAcu1,981 chainHg19,981 chainMm10,981 chainNetDanRer7,984 chainNetFr3,984 chainNetGalGal6,984 chainNetGasAcu1,984 chainNetHg19,984 chainNetMm10,984 chainNetOryLat2,990 chainOryLat2,987 microsat,89 netDanRer7,981 netFr3,981 netGalGal6,981 netGasAcu1,981 netHg19,981 netMm10,981 netOryLat2,987 transMapEnsemblV5,74 transMapEstV5,43 transMapRefSeqV5,43 transMapRnaV5,43 transMapV5,42 uniprot,824 uniprot,1942 creates chainDanRer7,631 chainFr3,631 chainGalGal6,631 chainGasAcu1,631 chainHg19,631 chainMm10,631 chainNetDanRer7,634 chainNetFr3,634 chainNetGalGal6,634 chainNetGasAcu1,634 chainNetHg19,634 chainNetMm10,634 chainNetOryLat2,640 chainOryLat2,637 netDanRer7,631 netFr3,631 netGalGal6,631 netGasAcu1,631 netHg19,631 netMm10,631 netOryLat2,637 credits augustusGene,247 blastHg18KG,137 chainDanRer7,907 chainFr3,907 chainGalGal6,907 chainGasAcu1,907 chainHg19,907 chainMm10,907 chainNetDanRer7,910 chainNetFr3,910 chainNetGalGal6,910 chainNetGasAcu1,910 chainNetHg19,910 chainNetMm10,910 chainNetOryLat2,916 chainOryLat2,913 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 ensGene,145 gaze,118 gc5Base,71 genscan,169 gold,271 microsat,104 mrna,397 nestedRepeats,302 netDanRer7,907 netFr3,907 netGalGal6,907 netGasAcu1,907 netHg19,907 netMm10,907 netOryLat2,913 simpleRepeat,66 tRNAs,328 transMapEnsemblV5,673 transMapEstV5,642 transMapRefSeqV5,642 transMapRnaV5,642 transMapV5,748 uniprot,1938 xenoMrna,467 xenoRefGene,277 criteria cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 mrna,236 mrna,254 mrna,292 mrna,310 transMapEnsemblV5,356 transMapEstV5,325 transMapRefSeqV5,325 transMapRnaV5,325 transMapV5,431 xenoMrna,310 xenoMrna,328 xenoMrna,366 xenoMrna,384 cross-species transMapEnsemblV5,26 transMapEstV5,24 transMapRefSeqV5,24 transMapRnaV5,24 transMapV5,23 cruz chainDanRer7,957 chainDanRer7,1002 chainFr3,957 chainFr3,1002 chainGalGal6,957 chainGalGal6,1002 chainGasAcu1,957 chainGasAcu1,1002 chainHg19,957 chainHg19,1002 chainMm10,957 chainMm10,1002 chainNetDanRer7,960 chainNetDanRer7,1005 chainNetFr3,960 chainNetFr3,1005 chainNetGalGal6,960 chainNetGalGal6,1005 chainNetGasAcu1,960 chainNetGasAcu1,1005 chainNetHg19,960 chainNetHg19,1005 chainNetMm10,960 chainNetMm10,1005 chainNetOryLat2,966 chainNetOryLat2,1011 chainOryLat2,963 chainOryLat2,1008 netDanRer7,957 netDanRer7,1002 netFr3,957 netFr3,1002 netGalGal6,957 netGalGal6,1002 netGasAcu1,957 netGasAcu1,1002 netHg19,957 netHg19,1002 netMm10,957 netMm10,1002 netOryLat2,963 netOryLat2,1008 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 cuff ensGene,182 culex augustusGene,220 curated uniprot,35 uniprot,110 uniprot,142 xenoRefGene,293 xenoRefGene,370 curr nestedRepeats,384 nestedRepeats,406 current mrna,107 nestedRepeats,250 uniprot,1296 uniprot,1575 uniprot,1692 uniprot,1712 xenoMrna,181 curwen ensGene,184 custom gaze,35 cytoplamsic uniprot,518 cytoplasmic unipLocCytopl,1 unipLocCytopl,3 uniprot,276 uniprot,284 uniprot,569 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5Base,24 d augustusGene,293 chainDanRer7,1049 chainDanRer7,1093 chainFr3,1049 chainFr3,1093 chainGalGal6,1049 chainGalGal6,1093 chainGasAcu1,1049 chainGasAcu1,1093 chainHg19,1049 chainHg19,1093 chainMm10,1049 chainMm10,1093 chainNetDanRer7,1052 chainNetDanRer7,1096 chainNetFr3,1052 chainNetFr3,1096 chainNetGalGal6,1052 chainNetGalGal6,1096 chainNetGasAcu1,1052 chainNetGasAcu1,1096 chainNetHg19,1052 chainNetHg19,1096 chainNetMm10,1052 chainNetMm10,1096 chainNetOryLat2,1058 chainNetOryLat2,1102 chainOryLat2,1055 chainOryLat2,1099 cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 ensGene,171 genscan,192 netDanRer7,1049 netDanRer7,1093 netFr3,1049 netFr3,1093 netGalGal6,1049 netGalGal6,1093 netGasAcu1,1049 netGasAcu1,1093 netHg19,1049 netHg19,1093 netMm10,1049 netMm10,1093 netOryLat2,1055 netOryLat2,1099 transMapEnsemblV5,761 transMapEnsemblV5,795 transMapEstV5,730 transMapEstV5,764 transMapRefSeqV5,730 transMapRefSeqV5,764 transMapRnaV5,730 transMapRnaV5,764 transMapV5,836 transMapV5,870 d23-6 mrna,442 xenoMrna,511 d501-4 xenoRefGene,388 d71-5 uniprot,2005 d756-63 xenoRefGene,354 d93-7 tRNAs,389 da mrna,422 xenoMrna,491 danrer7 chainDanRer7,7 chainDanRer7,69 chainDanRer7,303 chainNetDanRer7,8 chainNetDanRer7,72 chainNetDanRer7,306 chainNetDanRer7Viewchain,6 chainNetDanRer7Viewnet,6 netDanRer7,7 netDanRer7,69 netDanRer7,303 dark unipAliSwissprot,10 uniprot,162 uniprot,582 uniprot,587 xenoRefGene,73 darkly mrna,48 xenoMrna,52 data cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 ensGene,55 ensGene,59 ensGene,70 ensGene,102 gap,44 gap,134 gaze,88 gaze,125 gc5Base,73 gold,228 microsat,47 mrna,409 nestedRepeats,263 nestedRepeats,280 tRNAs,360 transMapEnsemblV5,515 transMapEnsemblV5,519 transMapEnsemblV5,533 transMapEnsemblV5,570 transMapEnsemblV5,574 transMapEnsemblV5,688 transMapEstV5,484 transMapEstV5,488 transMapEstV5,502 transMapEstV5,539 transMapEstV5,543 transMapEstV5,657 transMapRefSeqV5,484 transMapRefSeqV5,488 transMapRefSeqV5,502 transMapRefSeqV5,539 transMapRefSeqV5,543 transMapRefSeqV5,657 transMapRnaV5,484 transMapRnaV5,488 transMapRnaV5,502 transMapRnaV5,539 transMapRnaV5,543 transMapRnaV5,657 transMapV5,590 transMapV5,594 transMapV5,608 transMapV5,645 transMapV5,649 transMapV5,763 uniprot,32 uniprot,45 uniprot,892 uniprot,895 uniprot,1683 uniprot,1705 uniprot,1709 uniprot,1724 uniprot,1837 uniprot,1980 xenoMrna,478 xenoRefGene,34 xenoRefGene,287 database chainDanRer7,973 chainFr3,973 chainGalGal6,973 chainGasAcu1,973 chainHg19,973 chainMm10,973 chainNetDanRer7,976 chainNetFr3,976 chainNetGalGal6,976 chainNetGasAcu1,976 chainNetHg19,976 chainNetMm10,976 chainNetOryLat2,982 chainOryLat2,979 ensGene,193 mrna,440 nestedRepeats,345 netDanRer7,973 netFr3,973 netGalGal6,973 netGasAcu1,973 netHg19,973 netMm10,973 netOryLat2,979 tRNAs,110 tRNAs,372 tRNAs,387 transMapEnsemblV5,165 transMapEstV5,134 transMapRefSeqV5,134 transMapRnaV5,134 transMapV5,240 uniprot,25 uniprot,821 uniprot,2003 uniprot,2031 xenoMrna,509 xenoRefGene,352 xenoRefGene,373 xenoRefGene,386 databases mrna,416 tRNAs,489 transMapEnsemblV5,695 transMapEstV5,664 transMapRefSeqV5,664 transMapRnaV5,664 transMapV5,770 xenoMrna,485 david chainDanRer7,967 chainFr3,967 chainGalGal6,967 chainGasAcu1,967 chainHg19,967 chainMm10,967 chainNetDanRer7,970 chainNetFr3,970 chainNetGalGal6,970 chainNetGasAcu1,970 chainNetHg19,970 chainNetMm10,970 chainNetOryLat2,976 chainOryLat2,973 netDanRer7,967 netFr3,967 netGalGal6,967 netGasAcu1,967 netHg19,967 netMm10,967 netOryLat2,973 davis transMapEnsemblV5,724 transMapEstV5,693 transMapRefSeqV5,693 transMapRnaV5,693 transMapV5,799 de augustusGene,303 transMapEnsemblV5,771 transMapEstV5,740 transMapRefSeqV5,740 transMapRnaV5,740 transMapV5,846 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec chainMm10,4 chainMm10,66 chainMm10,300 chainNetMm10,5 chainNetMm10,69 chainNetMm10,303 chainNetMm10Viewchain,3 chainNetMm10Viewnet,3 nestedRepeats,389 nestedRepeats,411 netMm10,4 netMm10,66 netMm10,300 transMapEnsemblV5,746 transMapEnsemblV5,812 transMapEstV5,715 transMapEstV5,781 transMapRefSeqV5,715 transMapRefSeqV5,781 transMapRnaV5,715 transMapRnaV5,781 transMapV5,821 transMapV5,887 default chainDanRer7,312 chainFr3,312 chainGalGal6,312 chainGasAcu1,312 chainHg19,312 chainMm10,312 chainNetDanRer7,315 chainNetFr3,315 chainNetGalGal6,315 chainNetGasAcu1,315 chainNetHg19,315 chainNetMm10,315 chainNetOryLat2,321 chainOryLat2,318 cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 netDanRer7,312 netFr3,312 netGalGal6,312 netGasAcu1,312 netHg19,312 netMm10,312 netOryLat2,318 uniprot,225 xenoRefGene,101 xenoRefGene,194 defined uniprot,305 uniprot,1387 definition gap,193 deletion chainDanRer7,145 chainDanRer7,1054 chainFr3,145 chainFr3,1054 chainGalGal6,145 chainGalGal6,1054 chainGasAcu1,145 chainGasAcu1,1054 chainHg19,145 chainHg19,1054 chainMm10,145 chainMm10,1054 chainNetDanRer7,148 chainNetDanRer7,1057 chainNetFr3,148 chainNetFr3,1057 chainNetGalGal6,148 chainNetGalGal6,1057 chainNetGasAcu1,148 chainNetGasAcu1,1057 chainNetHg19,148 chainNetHg19,1057 chainNetMm10,148 chainNetMm10,1057 chainNetOryLat2,152 chainNetOryLat2,1063 chainOryLat2,149 chainOryLat2,1060 netDanRer7,145 netDanRer7,1054 netFr3,145 netFr3,1054 netGalGal6,145 netGalGal6,1054 netGasAcu1,145 netGasAcu1,1054 netHg19,145 netHg19,1054 netMm10,145 netMm10,1054 netOryLat2,149 netOryLat2,1060 deletions chainDanRer7,113 chainDanRer7,176 chainFr3,113 chainFr3,176 chainGalGal6,113 chainGalGal6,176 chainGasAcu1,113 chainGasAcu1,176 chainHg19,113 chainHg19,176 chainMm10,113 chainMm10,176 chainNetDanRer7,116 chainNetDanRer7,179 chainNetFr3,116 chainNetFr3,179 chainNetGalGal6,116 chainNetGalGal6,179 chainNetGasAcu1,116 chainNetGasAcu1,179 chainNetHg19,116 chainNetHg19,179 chainNetMm10,116 chainNetMm10,179 chainNetOryLat2,120 chainNetOryLat2,183 chainOryLat2,117 chainOryLat2,180 netDanRer7,113 netDanRer7,176 netFr3,113 netFr3,176 netGalGal6,113 netGalGal6,176 netGasAcu1,113 netGasAcu1,176 netHg19,113 netHg19,176 netMm10,113 netMm10,176 netOryLat2,117 netOryLat2,180 dense gold,59 mrna,40 nestedRepeats,157 nestedRepeats,168 xenoMrna,44 dependencies genscan,183 depending uniprot,442 uniprot,808 depicts gap,10 gold,63 gold,133 windowmaskerSdust,15 deprecated uniprot,1044 derived chainDanRer7,757 chainFr3,757 chainGalGal6,757 chainGasAcu1,757 chainHg19,757 chainMm10,757 chainNetDanRer7,760 chainNetFr3,760 chainNetGalGal6,760 chainNetGasAcu1,760 chainNetHg19,760 chainNetMm10,760 chainNetOryLat2,766 chainOryLat2,763 netDanRer7,757 netFr3,757 netGalGal6,757 netGasAcu1,757 netHg19,757 netMm10,757 netOryLat2,763 tRNAs,129 uniprot,830 described chainDanRer7,764 chainFr3,764 chainGalGal6,764 chainGasAcu1,764 chainHg19,764 chainMm10,764 chainNetDanRer7,767 chainNetFr3,767 chainNetGalGal6,767 chainNetGasAcu1,767 chainNetHg19,767 chainNetMm10,767 chainNetOryLat2,773 chainOryLat2,770 genscan,161 nestedRepeats,60 nestedRepeats,338 netDanRer7,764 netFr3,764 netGalGal6,764 netGasAcu1,764 netHg19,764 netMm10,764 netOryLat2,770 uniprot,1524 describes augustusGene,226 description augustusGene,12 blastHg18KG,13 chainDanRer7,12 chainDanRer7,769 chainFr3,12 chainFr3,769 chainGalGal6,12 chainGalGal6,769 chainGasAcu1,12 chainGasAcu1,769 chainHg19,12 chainHg19,769 chainMm10,12 chainMm10,769 chainNetDanRer7,15 chainNetDanRer7,772 chainNetFr3,15 chainNetFr3,772 chainNetGalGal6,15 chainNetGalGal6,772 chainNetGasAcu1,15 chainNetGasAcu1,772 chainNetHg19,15 chainNetHg19,772 chainNetMm10,15 chainNetMm10,772 chainNetOryLat2,17 chainNetOryLat2,778 chainOryLat2,14 chainOryLat2,775 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 ensGene,9 ensGene,32 gap,7 gaze,11 gaze,60 gc5Base,11 genscan,10 genscan,77 genscan,133 gold,8 microsat,10 mrna,10 mrna,56 nestedRepeats,14 netDanRer7,12 netDanRer7,769 netFr3,12 netFr3,769 netGalGal6,12 netGalGal6,769 netGasAcu1,12 netGasAcu1,769 netHg19,12 netHg19,769 netMm10,12 netMm10,769 netOryLat2,14 netOryLat2,775 simpleRepeat,11 tRNAs,13 transMapEnsemblV5,14 transMapEnsemblV5,232 transMapEstV5,12 transMapEstV5,201 transMapRefSeqV5,13 transMapRefSeqV5,201 transMapRnaV5,13 transMapRnaV5,201 transMapV5,11 transMapV5,307 uniprot,11 uniprot,106 windowmaskerSdust,12 xenoMrna,10 xenoMrna,130 xenoRefGene,10 xenoRefGene,97 descriptions augustusGene,91 designed gaze,36 uniprot,1355 desired mrna,221 xenoMrna,295 destination transMapEnsemblV5,414 transMapEstV5,383 transMapRefSeqV5,383 transMapRnaV5,383 transMapV5,489 destined uniprot,244 destuniq transMapEnsemblV5,433 transMapEstV5,402 transMapRefSeqV5,402 transMapRnaV5,402 transMapV5,508 detail genscan,164 detailed augustusGene,90 chainDanRer7,455 chainDanRer7,474 chainFr3,455 chainFr3,474 chainGalGal6,455 chainGalGal6,474 chainGasAcu1,455 chainGasAcu1,474 chainHg19,455 chainHg19,474 chainMm10,455 chainMm10,474 chainNetDanRer7,458 chainNetDanRer7,477 chainNetFr3,458 chainNetFr3,477 chainNetGalGal6,458 chainNetGalGal6,477 chainNetGasAcu1,458 chainNetGasAcu1,477 chainNetHg19,458 chainNetHg19,477 chainNetMm10,458 chainNetMm10,477 chainNetOryLat2,464 chainNetOryLat2,483 chainOryLat2,461 chainOryLat2,480 nestedRepeats,70 netDanRer7,455 netDanRer7,474 netFr3,455 netFr3,474 netGalGal6,455 netGalGal6,474 netGasAcu1,455 netGasAcu1,474 netHg19,455 netHg19,474 netMm10,455 netMm10,474 netOryLat2,461 netOryLat2,480 tRNAs,97 uniprot,692 details transMapEnsemblV5,234 transMapEstV5,203 transMapRefSeqV5,203 transMapRnaV5,203 transMapV5,309 uniprot,499 uniprot,771 uniprot,1157 uniprot,1584 detected tRNAs,377 detection tRNAs,39 tRNAs,449 determination transMapEnsemblV5,272 transMapEstV5,241 transMapRefSeqV5,241 transMapRnaV5,241 transMapV5,347 determine transMapV5,90 determined windowmaskerSdust,19 determining chainDanRer7,479 chainFr3,479 chainGalGal6,479 chainGasAcu1,479 chainHg19,479 chainMm10,479 chainNetDanRer7,482 chainNetFr3,482 chainNetGalGal6,482 chainNetGasAcu1,482 chainNetHg19,482 chainNetMm10,482 chainNetOryLat2,488 chainOryLat2,485 netDanRer7,479 netFr3,479 netGalGal6,479 netGasAcu1,479 netHg19,479 netMm10,479 netOryLat2,485 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 developed chainDanRer7,914 chainDanRer7,949 chainDanRer7,995 chainFr3,914 chainFr3,949 chainFr3,995 chainGalGal6,914 chainGalGal6,949 chainGalGal6,995 chainGasAcu1,914 chainGasAcu1,949 chainGasAcu1,995 chainHg19,914 chainHg19,949 chainHg19,995 chainMm10,914 chainMm10,949 chainMm10,995 chainNetDanRer7,917 chainNetDanRer7,952 chainNetDanRer7,998 chainNetFr3,917 chainNetFr3,952 chainNetFr3,998 chainNetGalGal6,917 chainNetGalGal6,952 chainNetGalGal6,998 chainNetGasAcu1,917 chainNetGasAcu1,952 chainNetGasAcu1,998 chainNetHg19,917 chainNetHg19,952 chainNetHg19,998 chainNetMm10,917 chainNetMm10,952 chainNetMm10,998 chainNetOryLat2,923 chainNetOryLat2,958 chainNetOryLat2,1004 chainOryLat2,920 chainOryLat2,955 chainOryLat2,1001 cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 netDanRer7,914 netDanRer7,949 netDanRer7,995 netFr3,914 netFr3,949 netFr3,995 netGalGal6,914 netGalGal6,949 netGalGal6,995 netGasAcu1,914 netGasAcu1,949 netGasAcu1,995 netHg19,914 netHg19,949 netHg19,995 netMm10,914 netMm10,949 netMm10,995 netOryLat2,920 netOryLat2,955 netOryLat2,1001 di-nucleotide microsat,3 microsat,32 dieci tRNAs,476 diekhans augustusGene,288 transMapEnsemblV5,680 transMapEnsemblV5,713 transMapEnsemblV5,756 transMapEnsemblV5,788 transMapEstV5,649 transMapEstV5,682 transMapEstV5,725 transMapEstV5,757 transMapRefSeqV5,649 transMapRefSeqV5,682 transMapRefSeqV5,725 transMapRefSeqV5,757 transMapRnaV5,649 transMapRnaV5,682 transMapRnaV5,725 transMapRnaV5,757 transMapV5,755 transMapV5,788 transMapV5,831 transMapV5,863 uniprot,1540 uniprot,1957 diemand uniprot,2014 differ uniprot,746 uniprot,1131 difference uniprot,1251 differences uniprot,374 uniprot,921 uniprot,1370 different augustusGene,39 augustusGene,85 augustusGene,96 augustusGene,144 augustusGene,155 augustusGene,179 augustusGene,193 chainDanRer7,554 chainFr3,554 chainGalGal6,554 chainGasAcu1,554 chainHg19,554 chainMm10,554 chainNetDanRer7,557 chainNetFr3,557 chainNetGalGal6,557 chainNetGasAcu1,557 chainNetHg19,557 chainNetMm10,557 chainNetOryLat2,563 chainOryLat2,560 ensGene,22 gc5Base,50 genscan,54 netDanRer7,554 netFr3,554 netGalGal6,554 netGasAcu1,554 netHg19,554 netMm10,554 netOryLat2,560 uniprot,634 xenoMrna,111 difficult transMapEnsemblV5,276 transMapEstV5,245 transMapRefSeqV5,245 transMapRnaV5,245 transMapV5,351 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 ensGene,111 uniprot,993 directory ensGene,86 ensGene,94 discarded chainDanRer7,683 chainFr3,683 chainGalGal6,683 chainGasAcu1,683 chainHg19,683 chainMm10,683 chainNetDanRer7,686 chainNetFr3,686 chainNetGalGal6,686 chainNetGasAcu1,686 chainNetHg19,686 chainNetMm10,686 chainNetOryLat2,692 chainOryLat2,689 netDanRer7,683 netFr3,683 netGalGal6,683 netGasAcu1,683 netHg19,683 netMm10,683 netOryLat2,689 transMapEnsemblV5,380 transMapEstV5,349 transMapRefSeqV5,349 transMapRnaV5,349 transMapV5,455 xenoRefGene,235 discover blastHg18KG,57 discovery transMapEnsemblV5,735 transMapEstV5,704 transMapRefSeqV5,704 transMapRnaV5,704 transMapV5,810 discussion nestedRepeats,364 disease uniprot,545 uniprot,616 diseases simpleRepeat,54 display chainDanRer7,237 chainDanRer7,305 chainDanRer7,350 chainDanRer7,380 chainDanRer7,439 chainDanRer7,468 chainDanRer7,497 chainDanRer7,971 chainFr3,237 chainFr3,305 chainFr3,350 chainFr3,380 chainFr3,439 chainFr3,468 chainFr3,497 chainFr3,971 chainGalGal6,237 chainGalGal6,305 chainGalGal6,350 chainGalGal6,380 chainGalGal6,439 chainGalGal6,468 chainGalGal6,497 chainGalGal6,971 chainGasAcu1,237 chainGasAcu1,305 chainGasAcu1,350 chainGasAcu1,380 chainGasAcu1,439 chainGasAcu1,468 chainGasAcu1,497 chainGasAcu1,971 chainHg19,237 chainHg19,305 chainHg19,350 chainHg19,380 chainHg19,439 chainHg19,468 chainHg19,497 chainHg19,971 chainMm10,237 chainMm10,305 chainMm10,350 chainMm10,380 chainMm10,439 chainMm10,468 chainMm10,497 chainMm10,971 chainNetDanRer7,240 chainNetDanRer7,308 chainNetDanRer7,353 chainNetDanRer7,383 chainNetDanRer7,442 chainNetDanRer7,471 chainNetDanRer7,500 chainNetDanRer7,974 chainNetFr3,240 chainNetFr3,308 chainNetFr3,353 chainNetFr3,383 chainNetFr3,442 chainNetFr3,471 chainNetFr3,500 chainNetFr3,974 chainNetGalGal6,240 chainNetGalGal6,308 chainNetGalGal6,353 chainNetGalGal6,383 chainNetGalGal6,442 chainNetGalGal6,471 chainNetGalGal6,500 chainNetGalGal6,974 chainNetGasAcu1,240 chainNetGasAcu1,308 chainNetGasAcu1,353 chainNetGasAcu1,383 chainNetGasAcu1,442 chainNetGasAcu1,471 chainNetGasAcu1,500 chainNetGasAcu1,974 chainNetHg19,240 chainNetHg19,308 chainNetHg19,353 chainNetHg19,383 chainNetHg19,442 chainNetHg19,471 chainNetHg19,500 chainNetHg19,974 chainNetMm10,240 chainNetMm10,308 chainNetMm10,353 chainNetMm10,383 chainNetMm10,442 chainNetMm10,471 chainNetMm10,500 chainNetMm10,974 chainNetOryLat2,244 chainNetOryLat2,314 chainNetOryLat2,359 chainNetOryLat2,389 chainNetOryLat2,448 chainNetOryLat2,477 chainNetOryLat2,506 chainNetOryLat2,980 chainOryLat2,241 chainOryLat2,311 chainOryLat2,356 chainOryLat2,386 chainOryLat2,445 chainOryLat2,474 chainOryLat2,503 chainOryLat2,977 genscan,61 genscan,69 genscan,104 mrna,25 mrna,33 mrna,41 mrna,71 mrna,98 mrna,128 mrna,262 mrna,286 mrna,302 mrna,318 nestedRepeats,111 netDanRer7,237 netDanRer7,305 netDanRer7,350 netDanRer7,380 netDanRer7,439 netDanRer7,468 netDanRer7,497 netDanRer7,971 netFr3,237 netFr3,305 netFr3,350 netFr3,380 netFr3,439 netFr3,468 netFr3,497 netFr3,971 netGalGal6,237 netGalGal6,305 netGalGal6,350 netGalGal6,380 netGalGal6,439 netGalGal6,468 netGalGal6,497 netGalGal6,971 netGasAcu1,237 netGasAcu1,305 netGasAcu1,350 netGasAcu1,380 netGasAcu1,439 netGasAcu1,468 netGasAcu1,497 netGasAcu1,971 netHg19,237 netHg19,305 netHg19,350 netHg19,380 netHg19,439 netHg19,468 netHg19,497 netHg19,971 netMm10,237 netMm10,305 netMm10,350 netMm10,380 netMm10,439 netMm10,468 netMm10,497 netMm10,971 netOryLat2,241 netOryLat2,311 netOryLat2,356 netOryLat2,386 netOryLat2,445 netOryLat2,474 netOryLat2,503 netOryLat2,977 transMapEnsemblV5,91 transMapEnsemblV5,99 transMapEnsemblV5,112 transMapEstV5,60 transMapEstV5,68 transMapEstV5,81 transMapRefSeqV5,60 transMapRefSeqV5,68 transMapRefSeqV5,81 transMapRnaV5,60 transMapRnaV5,68 transMapRnaV5,81 transMapV5,166 transMapV5,174 transMapV5,187 uniprot,446 xenoMrna,29 xenoMrna,37 xenoMrna,45 xenoMrna,145 xenoMrna,172 xenoMrna,202 xenoMrna,336 xenoMrna,360 xenoMrna,376 xenoMrna,392 xenoRefGene,41 xenoRefGene,49 xenoRefGene,78 xenoRefGene,114 xenoRefGene,157 displayed chainDanRer7,416 chainDanRer7,513 chainDanRer7,688 chainFr3,416 chainFr3,513 chainFr3,688 chainGalGal6,416 chainGalGal6,513 chainGalGal6,688 chainGasAcu1,416 chainGasAcu1,513 chainGasAcu1,688 chainHg19,416 chainHg19,513 chainHg19,688 chainMm10,416 chainMm10,513 chainMm10,688 chainNetDanRer7,419 chainNetDanRer7,516 chainNetDanRer7,691 chainNetFr3,419 chainNetFr3,516 chainNetFr3,691 chainNetGalGal6,419 chainNetGalGal6,516 chainNetGalGal6,691 chainNetGasAcu1,419 chainNetGasAcu1,516 chainNetGasAcu1,691 chainNetHg19,419 chainNetHg19,516 chainNetHg19,691 chainNetMm10,419 chainNetMm10,516 chainNetMm10,691 chainNetOryLat2,425 chainNetOryLat2,522 chainNetOryLat2,697 chainOryLat2,422 chainOryLat2,519 chainOryLat2,694 cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 gc5Base,54 nestedRepeats,124 nestedRepeats,217 netDanRer7,416 netDanRer7,513 netDanRer7,688 netFr3,416 netFr3,513 netFr3,688 netGalGal6,416 netGalGal6,513 netGalGal6,688 netGasAcu1,416 netGasAcu1,513 netGasAcu1,688 netHg19,416 netHg19,513 netHg19,688 netMm10,416 netMm10,513 netMm10,688 netOryLat2,422 netOryLat2,519 netOryLat2,694 xenoRefGene,202 displays chainDanRer7,120 chainFr3,120 chainGalGal6,120 chainGasAcu1,120 chainHg19,120 chainMm10,120 chainNetDanRer7,123 chainNetFr3,123 chainNetGalGal6,123 chainNetGasAcu1,123 chainNetHg19,123 chainNetMm10,123 chainNetOryLat2,127 chainOryLat2,124 cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 microsat,13 netDanRer7,120 netFr3,120 netGalGal6,120 netGasAcu1,120 netHg19,120 netMm10,120 netOryLat2,124 simpleRepeat,14 tRNAs,16 xenoMrna,13 dissertation augustusGene,105 distance transMapEnsemblV5,219 transMapEstV5,188 transMapRefSeqV5,188 transMapRnaV5,188 transMapV5,294 distances transMapEnsemblV5,70 transMapEstV5,39 transMapRefSeqV5,39 transMapRnaV5,39 transMapV5,38 distant transMapEnsemblV5,268 transMapEstV5,237 transMapRefSeqV5,237 transMapRnaV5,237 transMapV5,63 transMapV5,343 distinguish cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,82 distributions augustusGene,83 genscan,42 disulf unipDisulfBond,1 uniprot,472 disulfide unipDisulfBond,4 uniprot,333 uniprot,335 diverged chainDanRer7,906 chainFr3,906 chainGalGal6,906 chainGasAcu1,906 chainHg19,906 chainMm10,906 chainNetDanRer7,909 chainNetFr3,909 chainNetGalGal6,909 chainNetGasAcu1,909 chainNetHg19,909 chainNetMm10,909 chainNetOryLat2,915 chainOryLat2,912 nestedRepeats,212 netDanRer7,906 netFr3,906 netGalGal6,906 netGasAcu1,906 netHg19,906 netMm10,906 netOryLat2,912 transMapV5,151 divided uniprot,56 dj blastHg18KG,162 mrna,426 xenoMrna,495 dl mrna,430 xenoMrna,499 dna chainDanRer7,1015 chainFr3,1015 chainGalGal6,1015 chainGasAcu1,1015 chainHg19,1015 chainMm10,1015 chainNetDanRer7,1018 chainNetFr3,1018 chainNetGalGal6,1018 chainNetGasAcu1,1018 chainNetHg19,1018 chainNetMm10,1018 chainNetOryLat2,1024 chainOryLat2,1021 cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 gaze,110 genscan,219 microsat,123 nestedRepeats,33 nestedRepeats,41 netDanRer7,1015 netFr3,1015 netGalGal6,1015 netGasAcu1,1015 netHg19,1015 netMm10,1015 netOryLat2,1021 simpleRepeat,83 tRNAs,427 tRNAs,488 xenoMrna,108 do cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 tRNAs,152 tRNAs,305 transMapEnsemblV5,317 transMapEstV5,286 transMapRefSeqV5,286 transMapRnaV5,286 transMapV5,392 uniprot,168 uniprot,1129 does tRNAs,113 tRNAs,135 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 domain unipLocExtra,4 domains unipDomain,1 unipDomain,3 unipLocCytopl,4 unipLocTransMemb,4 uniprot,255 uniprot,257 uniprot,266 uniprot,268 uniprot,277 uniprot,279 uniprot,323 uniprot,325 uniprot,331 uniprot,391 uniprot,514 uniprot,516 uniprot,519 uniprot,550 done augustusGene,265 augustusGene,281 donor genscan,31 double chainDanRer7,128 chainDanRer7,157 chainFr3,128 chainFr3,157 chainGalGal6,128 chainGalGal6,157 chainGasAcu1,128 chainGasAcu1,157 chainHg19,128 chainHg19,157 chainMm10,128 chainMm10,157 chainNetDanRer7,131 chainNetDanRer7,160 chainNetFr3,131 chainNetFr3,160 chainNetGalGal6,131 chainNetGalGal6,160 chainNetGasAcu1,131 chainNetGasAcu1,160 chainNetHg19,131 chainNetHg19,160 chainNetMm10,131 chainNetMm10,160 chainNetOryLat2,135 chainNetOryLat2,164 chainOryLat2,132 chainOryLat2,161 netDanRer7,128 netDanRer7,157 netFr3,128 netFr3,157 netGalGal6,128 netGalGal6,157 netGasAcu1,128 netGasAcu1,157 netHg19,128 netHg19,157 netMm10,128 netMm10,157 netOryLat2,132 netOryLat2,161 double-lined chainDanRer7,217 chainFr3,217 chainGalGal6,217 chainGasAcu1,217 chainHg19,217 chainMm10,217 chainNetDanRer7,220 chainNetFr3,220 chainNetGalGal6,220 chainNetGasAcu1,220 chainNetHg19,220 chainNetMm10,220 chainNetOryLat2,224 chainOryLat2,221 netDanRer7,217 netFr3,217 netGalGal6,217 netGasAcu1,217 netHg19,217 netMm10,217 netOryLat2,221 double-sided chainDanRer7,102 chainFr3,102 chainGalGal6,102 chainGasAcu1,102 chainHg19,102 chainMm10,102 chainNetDanRer7,105 chainNetFr3,105 chainNetGalGal6,105 chainNetGasAcu1,105 chainNetHg19,105 chainNetMm10,105 chainNetOryLat2,109 chainOryLat2,106 netDanRer7,102 netFr3,102 netGalGal6,102 netGasAcu1,102 netHg19,102 netMm10,102 netOryLat2,106 down ensGene,186 download ensGene,93 ensGene,143 transMapEnsemblV5,557 transMapEstV5,526 transMapRefSeqV5,526 transMapRnaV5,526 transMapV5,632 uniprot,1744 uniprot,1983 downloaded transMapEnsemblV5,554 transMapEnsemblV5,623 transMapEstV5,523 transMapEstV5,592 transMapRefSeqV5,523 transMapRefSeqV5,592 transMapRnaV5,523 transMapRnaV5,592 transMapV5,629 transMapV5,698 uniprot,1741 uniprot,1777 downloading transMapEnsemblV5,633 transMapEstV5,602 transMapRefSeqV5,602 transMapRnaV5,602 transMapV5,708 uniprot,1787 downloads ensGene,74 ensGene,85 uniprot,1698 dr xenoRefGene,364 draft gold,68 drawn gap,55 gold,125 draws uniprot,1532 drosophila augustusGene,213 due chainDanRer7,142 chainDanRer7,210 chainDanRer7,222 chainFr3,142 chainFr3,210 chainFr3,222 chainGalGal6,142 chainGalGal6,210 chainGalGal6,222 chainGasAcu1,142 chainGasAcu1,210 chainGasAcu1,222 chainHg19,142 chainHg19,210 chainHg19,222 chainMm10,142 chainMm10,210 chainMm10,222 chainNetDanRer7,145 chainNetDanRer7,213 chainNetDanRer7,225 chainNetFr3,145 chainNetFr3,213 chainNetFr3,225 chainNetGalGal6,145 chainNetGalGal6,213 chainNetGalGal6,225 chainNetGasAcu1,145 chainNetGasAcu1,213 chainNetGasAcu1,225 chainNetHg19,145 chainNetHg19,213 chainNetHg19,225 chainNetMm10,145 chainNetMm10,213 chainNetMm10,225 chainNetOryLat2,149 chainNetOryLat2,217 chainNetOryLat2,229 chainOryLat2,146 chainOryLat2,214 chainOryLat2,226 netDanRer7,142 netDanRer7,210 netDanRer7,222 netFr3,142 netFr3,210 netFr3,222 netGalGal6,142 netGalGal6,210 netGalGal6,222 netGasAcu1,142 netGasAcu1,210 netGasAcu1,222 netHg19,142 netHg19,210 netHg19,222 netMm10,142 netMm10,210 netMm10,222 netOryLat2,146 netOryLat2,214 netOryLat2,226 uniprot,848 uniprot,919 uniprot,1368 duplicate uniprot,594 duplication chainDanRer7,1053 chainFr3,1053 chainGalGal6,1053 chainGasAcu1,1053 chainHg19,1053 chainMm10,1053 chainNetDanRer7,1056 chainNetFr3,1056 chainNetGalGal6,1056 chainNetGasAcu1,1056 chainNetHg19,1056 chainNetMm10,1056 chainNetOryLat2,1062 chainOryLat2,1059 cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 netDanRer7,1053 netFr3,1053 netGalGal6,1053 netGasAcu1,1053 netHg19,1053 netMm10,1053 netOryLat2,1059 duplications transMapEnsemblV5,310 transMapEnsemblV5,507 transMapEstV5,279 transMapEstV5,476 transMapRefSeqV5,279 transMapRefSeqV5,476 transMapRnaV5,279 transMapRnaV5,476 transMapV5,385 transMapV5,582 durbin gaze,77 tRNAs,396 during chainDanRer7,811 chainFr3,811 chainGalGal6,811 chainGasAcu1,811 chainHg19,811 chainMm10,811 chainNetDanRer7,814 chainNetFr3,814 chainNetGalGal6,814 chainNetGasAcu1,814 chainNetHg19,814 chainNetMm10,814 chainNetOryLat2,820 chainOryLat2,817 gap,105 netDanRer7,811 netFr3,811 netGalGal6,811 netGasAcu1,811 netHg19,811 netMm10,811 netOryLat2,817 dynamic chainDanRer7,644 chainFr3,644 chainGalGal6,644 chainGasAcu1,644 chainHg19,644 chainMm10,644 chainNetDanRer7,647 chainNetFr3,647 chainNetGalGal6,647 chainNetGasAcu1,647 chainNetHg19,647 chainNetMm10,647 chainNetOryLat2,653 chainOryLat2,650 gaze,90 netDanRer7,644 netFr3,644 netGalGal6,644 netGasAcu1,644 netHg19,644 netMm10,644 netOryLat2,650 e ensGene,173 tRNAs,352 uniprot,2021 e.g chainDanRer7,367 chainFr3,367 chainGalGal6,367 chainGasAcu1,367 chainHg19,367 chainMm10,367 chainNetDanRer7,370 chainNetFr3,370 chainNetGalGal6,370 chainNetGasAcu1,370 chainNetHg19,370 chainNetMm10,370 chainNetOryLat2,376 chainOryLat2,373 netDanRer7,367 netFr3,367 netGalGal6,367 netGasAcu1,367 netHg19,367 netMm10,367 netOryLat2,373 uniprot,398 uniprot,467 e247 transMapEnsemblV5,815 transMapEstV5,784 transMapRefSeqV5,784 transMapRnaV5,784 transMapV5,890 each blastHg18KG,68 chainDanRer7,255 chainFr3,255 chainGalGal6,255 chainGasAcu1,255 chainHg19,255 chainMm10,255 chainNetDanRer7,258 chainNetFr3,258 chainNetGalGal6,258 chainNetGasAcu1,258 chainNetHg19,258 chainNetMm10,258 chainNetOryLat2,262 chainOryLat2,259 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 genscan,99 mrna,161 nestedRepeats,120 netDanRer7,255 netFr3,255 netGalGal6,255 netGasAcu1,255 netHg19,255 netMm10,255 netOryLat2,259 transMapEnsemblV5,386 transMapEnsemblV5,400 transMapEnsemblV5,409 transMapEnsemblV5,428 transMapEstV5,355 transMapEstV5,369 transMapEstV5,378 transMapEstV5,397 transMapRefSeqV5,355 transMapRefSeqV5,369 transMapRefSeqV5,378 transMapRefSeqV5,397 transMapRnaV5,355 transMapRnaV5,369 transMapRnaV5,378 transMapRnaV5,397 transMapV5,461 transMapV5,475 transMapV5,484 transMapV5,503 uniprot,151 xenoMrna,235 echo uniprot,1925 eddy tRNAs,65 tRNAs,394 tRNAs,442 edge uniprot,1182 uniprot,1451 editors genscan,195 educated tRNAs,255 either chainDanRer7,125 chainFr3,125 chainGalGal6,125 chainGasAcu1,125 chainHg19,125 chainMm10,125 chainNetDanRer7,128 chainNetFr3,128 chainNetGalGal6,128 chainNetGasAcu1,128 chainNetHg19,128 chainNetMm10,128 chainNetOryLat2,132 chainOryLat2,129 gap,34 netDanRer7,125 netFr3,125 netGalGal6,125 netGasAcu1,125 netHg19,125 netMm10,125 netOryLat2,129 uniprot,816 uniprot,1398 electronic nestedRepeats,348 elements nestedRepeats,352 nestedRepeats,380 tRNAs,302 elsevier genscan,202 em windowmaskerSdust,93 emerged chainDanRer7,817 chainFr3,817 chainGalGal6,817 chainGasAcu1,817 chainHg19,817 chainMm10,817 chainNetDanRer7,820 chainNetFr3,820 chainNetGalGal6,820 chainNetGasAcu1,820 chainNetHg19,820 chainNetMm10,820 chainNetOryLat2,826 chainOryLat2,823 netDanRer7,817 netFr3,817 netGalGal6,817 netGasAcu1,817 netHg19,817 netMm10,817 netOryLat2,823 encode tRNAs,171 encodes tRNAs,143 end transMapEnsemblV5,670 transMapEstV5,639 transMapRefSeqV5,639 transMapRnaV5,639 transMapV5,745 uniprot,126 uniprot,210 uniprot,1823 ensembl ensGene,1 ensGene,3 ensGene,16 ensGene,38 ensGene,57 ensGene,151 ensGene,162 ensGene,191 transMapEnsemblV5,2 transMapEnsemblV5,4 transMapEnsemblV5,20 transMapEnsemblV5,40 transMapEnsemblV5,47 transMapEnsemblV5,58 transMapEnsemblV5,589 transMapEnsemblV5,705 transMapEstV5,558 transMapEstV5,674 transMapRefSeqV5,558 transMapRefSeqV5,674 transMapRnaV5,558 transMapRnaV5,674 transMapV5,664 transMapV5,780 uniprot,731 uniprot,834 uniprot,865 ensgene.txt.gz ensGene,88 ensure transMapEnsemblV5,382 transMapEstV5,351 transMapRefSeqV5,351 transMapRnaV5,351 transMapV5,457 enter chainDanRer7,361 chainFr3,361 chainGalGal6,361 chainGasAcu1,361 chainHg19,361 chainMm10,361 chainNetDanRer7,364 chainNetFr3,364 chainNetGalGal6,364 chainNetGasAcu1,364 chainNetHg19,364 chainNetMm10,364 chainNetOryLat2,370 chainOryLat2,367 netDanRer7,361 netFr3,361 netGalGal6,361 netGasAcu1,361 netHg19,361 netMm10,361 netOryLat2,367 entered mrna,198 xenoMrna,272 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 windowmaskerSdust,37 entirely uniprot,1434 ermolaeva xenoRefGene,327 especially mrna,99 xenoMrna,173 est mrna,9 transMapEnsemblV5,686 transMapEstV5,4 transMapEstV5,18 transMapEstV5,655 transMapRefSeqV5,655 transMapRnaV5,655 transMapV5,761 xenoMrna,9 estimated gold,51 estimates gold,242 ests transMapEnsemblV5,176 transMapEnsemblV5,598 transMapEstV5,2 transMapEstV5,145 transMapEstV5,567 transMapRefSeqV5,145 transMapRefSeqV5,567 transMapRnaV5,145 transMapRnaV5,567 transMapV5,251 transMapV5,673 et cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 ensGene,45 ensGene,188 transMapEnsemblV5,732 transMapEstV5,701 transMapRefSeqV5,701 transMapRnaV5,701 transMapV5,807 xenoRefGene,337 etc uniprot,479 eukaryotes tRNAs,101 eukaryotic tRNAs,483 evaluate uniprot,1461 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 even uniprot,136 every chainDanRer7,270 chainFr3,270 chainGalGal6,270 chainGasAcu1,270 chainHg19,270 chainMm10,270 chainNetDanRer7,273 chainNetFr3,273 chainNetGalGal6,273 chainNetGasAcu1,273 chainNetHg19,273 chainNetMm10,273 chainNetOryLat2,277 chainOryLat2,274 netDanRer7,270 netFr3,270 netGalGal6,270 netGasAcu1,270 netHg19,270 netMm10,270 netOryLat2,274 uniprot,1571 evolution chainDanRer7,1050 chainFr3,1050 chainGalGal6,1050 chainGasAcu1,1050 chainHg19,1050 chainMm10,1050 chainNetDanRer7,1053 chainNetFr3,1053 chainNetGalGal6,1053 chainNetGasAcu1,1053 chainNetHg19,1053 chainNetMm10,1053 chainNetOryLat2,1059 chainOryLat2,1056 netDanRer7,1050 netFr3,1050 netGalGal6,1050 netGasAcu1,1050 netHg19,1050 netMm10,1050 netOryLat2,1056 evolutionary cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 transMapEnsemblV5,69 transMapEstV5,38 transMapRefSeqV5,38 transMapRnaV5,38 transMapV5,37 evry gold,22 ew blastHg18KG,160 ewing transMapEnsemblV5,726 transMapEstV5,695 transMapRefSeqV5,695 transMapRnaV5,695 transMapV5,801 exact tRNAs,264 uniprot,1622 uniprot,1747 example mrna,130 mrna,183 transMapEnsemblV5,445 transMapEnsemblV5,657 transMapEstV5,414 transMapEstV5,626 transMapRefSeqV5,414 transMapRefSeqV5,626 transMapRnaV5,414 transMapRnaV5,626 transMapV5,96 transMapV5,520 transMapV5,732 uniprot,1450 uniprot,1811 uniprot,1901 xenoMrna,204 xenoMrna,257 except uniprot,508 exclude mrna,78 mrna,272 mrna,278 xenoMrna,152 xenoMrna,346 xenoMrna,352 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 uniprot,1918 exist chainDanRer7,400 chainFr3,400 chainGalGal6,400 chainGasAcu1,400 chainHg19,400 chainMm10,400 chainNetDanRer7,403 chainNetFr3,403 chainNetGalGal6,403 chainNetGasAcu1,403 chainNetHg19,403 chainNetMm10,403 chainNetOryLat2,409 chainOryLat2,406 cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,94 netDanRer7,400 netFr3,400 netGalGal6,400 netGasAcu1,400 netHg19,400 netMm10,400 netOryLat2,406 exofish gaze,45 exon augustusGene,86 blastHg18KG,58 blastHg18KG,69 blastHg18KG,101 blastHg18KG,114 exons blastHg18KG,84 chainDanRer7,48 chainFr3,48 chainGalGal6,48 chainGasAcu1,48 chainHg19,48 chainMm10,48 chainNetDanRer7,51 chainNetFr3,51 chainNetGalGal6,51 chainNetGasAcu1,51 chainNetHg19,51 chainNetMm10,51 chainNetOryLat2,53 chainOryLat2,50 genscan,44 netDanRer7,48 netFr3,48 netGalGal6,48 netGasAcu1,48 netHg19,48 netMm10,48 netOryLat2,50 transMapEnsemblV5,739 transMapEstV5,708 transMapRefSeqV5,708 transMapRnaV5,708 transMapV5,814 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expansions simpleRepeat,48 expected cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 expense transMapEnsemblV5,295 transMapEstV5,264 transMapRefSeqV5,264 transMapRnaV5,264 transMapV5,370 experimentally uniprot,304 explanation gc5Base,66 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 ensGene,62 uniprot,1716 expressed mrna,138 xenoMrna,212 expression cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extended blastHg18KG,117 extending blastHg18KG,103 extra transMapEnsemblV5,549 transMapEstV5,518 transMapRefSeqV5,518 transMapRnaV5,518 transMapV5,624 extracellular unipLocExtra,1 unipLocExtra,3 uniprot,254 uniprot,262 uniprot,513 uniprot,566 extracted nestedRepeats,23 f chainDanRer7,1023 chainFr3,1023 chainGalGal6,1023 chainGasAcu1,1023 chainHg19,1023 chainMm10,1023 chainNetDanRer7,1026 chainNetFr3,1026 chainNetGalGal6,1026 chainNetGasAcu1,1026 chainNetHg19,1026 chainNetMm10,1026 chainNetOryLat2,1032 chainOryLat2,1029 netDanRer7,1023 netFr3,1023 netGalGal6,1023 netGasAcu1,1023 netHg19,1023 netMm10,1023 netOryLat2,1029 tRNAs,473 xenoRefGene,324 facilitate genscan,106 uniprot,1852 factor mrna,175 xenoMrna,249 false tRNAs,87 famiglietti uniprot,2018 families uniprot,1395 faq augustusGene,45 ensGene,28 genscan,60 nestedRepeats,298 transMapEnsemblV5,576 transMapEstV5,545 transMapRefSeqV5,545 transMapRnaV5,545 transMapV5,651 uniprot,1839 far uniprot,599 farrell xenoRefGene,329 feature chainDanRer7,241 chainFr3,241 chainGalGal6,241 chainGasAcu1,241 chainHg19,241 chainMm10,241 chainNetDanRer7,244 chainNetFr3,244 chainNetGalGal6,244 chainNetGasAcu1,244 chainNetHg19,244 chainNetMm10,244 chainNetOryLat2,248 chainOryLat2,245 genscan,129 mrna,322 netDanRer7,241 netFr3,241 netGalGal6,241 netGasAcu1,241 netHg19,241 netMm10,241 netOryLat2,245 transMapEnsemblV5,116 transMapEstV5,85 transMapRefSeqV5,85 transMapRnaV5,85 transMapV5,191 uniprot,64 uniprot,524 uniprot,613 xenoMrna,396 xenoRefGene,145 xenoRefGene,178 features tRNAs,185 tRNAs,218 tRNAs,238 tRNAs,276 transMapEnsemblV5,651 transMapEstV5,620 transMapRefSeqV5,620 transMapRnaV5,620 transMapV5,726 uniprot,694 uniprot,1805 xenoRefGene,81 feb chainGasAcu1,4 chainGasAcu1,66 chainGasAcu1,300 chainHg19,4 chainHg19,66 chainHg19,300 chainNetGasAcu1,5 chainNetGasAcu1,69 chainNetGasAcu1,303 chainNetGasAcu1Viewchain,3 chainNetGasAcu1Viewnet,3 chainNetHg19,5 chainNetHg19,69 chainNetHg19,303 chainNetHg19Viewchain,3 chainNetHg19Viewnet,3 netGasAcu1,4 netGasAcu1,66 netGasAcu1,300 netHg19,4 netHg19,66 netHg19,300 fed chainDanRer7,610 chainFr3,610 chainGalGal6,610 chainGasAcu1,610 chainHg19,610 chainMm10,610 chainNetDanRer7,613 chainNetFr3,613 chainNetGalGal6,613 chainNetGasAcu1,613 chainNetHg19,613 chainNetMm10,613 chainNetOryLat2,619 chainOryLat2,616 netDanRer7,610 netFr3,610 netGalGal6,610 netGasAcu1,610 netHg19,610 netMm10,610 netOryLat2,616 feedback uniprot,1445 uniprot,1961 fewer tRNAs,91 transMapV5,159 ffer windowmaskerSdust,96 fichant tRNAs,32 tRNAs,417 field augustusGene,120 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 gap,192 uniprot,884 uniprot,1511 uniprot,1614 uniprot,1737 uniprot,1756 windowmaskerSdust,77 filenames uniprot,1748 uniprot,1894 files ensGene,78 transMapEnsemblV5,544 transMapEnsemblV5,578 transMapEstV5,513 transMapEstV5,547 transMapRefSeqV5,513 transMapRefSeqV5,547 transMapRnaV5,513 transMapRnaV5,547 transMapV5,619 transMapV5,653 uniprot,1863 fill chainDanRer7,841 chainDanRer7,874 chainFr3,841 chainFr3,874 chainGalGal6,841 chainGalGal6,874 chainGasAcu1,841 chainGasAcu1,874 chainHg19,841 chainHg19,874 chainMm10,841 chainMm10,874 chainNetDanRer7,844 chainNetDanRer7,877 chainNetFr3,844 chainNetFr3,877 chainNetGalGal6,844 chainNetGalGal6,877 chainNetGasAcu1,844 chainNetGasAcu1,877 chainNetHg19,844 chainNetHg19,877 chainNetMm10,844 chainNetMm10,877 chainNetOryLat2,850 chainNetOryLat2,883 chainOryLat2,847 chainOryLat2,880 netDanRer7,841 netDanRer7,874 netFr3,841 netFr3,874 netGalGal6,841 netGalGal6,874 netGasAcu1,841 netGasAcu1,874 netHg19,841 netHg19,874 netMm10,841 netMm10,874 netOryLat2,847 netOryLat2,880 filled chainDanRer7,409 chainDanRer7,428 chainDanRer7,823 chainDanRer7,896 chainFr3,409 chainFr3,428 chainFr3,823 chainFr3,896 chainGalGal6,409 chainGalGal6,428 chainGalGal6,823 chainGalGal6,896 chainGasAcu1,409 chainGasAcu1,428 chainGasAcu1,823 chainGasAcu1,896 chainHg19,409 chainHg19,428 chainHg19,823 chainHg19,896 chainMm10,409 chainMm10,428 chainMm10,823 chainMm10,896 chainNetDanRer7,412 chainNetDanRer7,431 chainNetDanRer7,826 chainNetDanRer7,899 chainNetFr3,412 chainNetFr3,431 chainNetFr3,826 chainNetFr3,899 chainNetGalGal6,412 chainNetGalGal6,431 chainNetGalGal6,826 chainNetGalGal6,899 chainNetGasAcu1,412 chainNetGasAcu1,431 chainNetGasAcu1,826 chainNetGasAcu1,899 chainNetHg19,412 chainNetHg19,431 chainNetHg19,826 chainNetHg19,899 chainNetMm10,412 chainNetMm10,431 chainNetMm10,826 chainNetMm10,899 chainNetOryLat2,418 chainNetOryLat2,437 chainNetOryLat2,832 chainNetOryLat2,905 chainOryLat2,415 chainOryLat2,434 chainOryLat2,829 chainOryLat2,902 netDanRer7,409 netDanRer7,428 netDanRer7,823 netDanRer7,896 netFr3,409 netFr3,428 netFr3,823 netFr3,896 netGalGal6,409 netGalGal6,428 netGalGal6,823 netGalGal6,896 netGasAcu1,409 netGasAcu1,428 netGasAcu1,823 netGasAcu1,896 netHg19,409 netHg19,428 netHg19,823 netHg19,896 netMm10,409 netMm10,428 netMm10,823 netMm10,896 netOryLat2,415 netOryLat2,434 netOryLat2,829 netOryLat2,902 filter chainDanRer7,373 chainFr3,373 chainGalGal6,373 chainGasAcu1,373 chainHg19,373 chainMm10,373 chainNetDanRer7,376 chainNetFr3,376 chainNetGalGal6,376 chainNetGasAcu1,376 chainNetHg19,376 chainNetMm10,376 chainNetOryLat2,382 chainOryLat2,379 genscan,82 mrna,63 mrna,112 mrna,125 mrna,134 mrna,181 mrna,211 mrna,235 mrna,253 mrna,291 mrna,309 netDanRer7,373 netFr3,373 netGalGal6,373 netGasAcu1,373 netHg19,373 netMm10,373 netOryLat2,379 uniprot,187 uniprot,664 xenoMrna,137 xenoMrna,186 xenoMrna,199 xenoMrna,208 xenoMrna,255 xenoMrna,285 xenoMrna,309 xenoMrna,327 xenoMrna,365 xenoMrna,383 filtered mrna,274 transMapEnsemblV5,77 transMapEnsemblV5,349 transMapEstV5,46 transMapEstV5,318 transMapRefSeqV5,46 transMapRefSeqV5,318 transMapRnaV5,46 transMapRnaV5,318 transMapV5,45 transMapV5,424 uniprot,1480 uniprot,1499 xenoMrna,348 filtering mrna,213 transMapEnsemblV5,236 transMapEnsemblV5,304 transMapEstV5,205 transMapEstV5,273 transMapRefSeqV5,205 transMapRefSeqV5,273 transMapRnaV5,205 transMapRnaV5,273 transMapV5,311 transMapV5,379 uniprot,693 uniprot,912 uniprot,1154 xenoMrna,287 filters tRNAs,55 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 uniprot,1153 finally blastHg18KG,80 find chainDanRer7,653 chainFr3,653 chainGalGal6,653 chainGasAcu1,653 chainHg19,653 chainMm10,653 chainNetDanRer7,656 chainNetFr3,656 chainNetGalGal6,656 chainNetGasAcu1,656 chainNetHg19,656 chainNetMm10,656 chainNetOryLat2,662 chainOryLat2,659 netDanRer7,653 netFr3,653 netGalGal6,653 netGasAcu1,653 netHg19,653 netMm10,653 netOryLat2,659 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 finding augustusGene,306 chainDanRer7,280 chainFr3,280 chainGalGal6,280 chainGasAcu1,280 chainHg19,280 chainMm10,280 chainNetDanRer7,283 chainNetFr3,283 chainNetGalGal6,283 chainNetGasAcu1,283 chainNetHg19,283 chainNetMm10,283 chainNetOryLat2,287 chainOryLat2,284 netDanRer7,280 netFr3,280 netGalGal6,280 netGasAcu1,280 netHg19,280 netMm10,280 netOryLat2,284 transMapEnsemblV5,774 transMapEstV5,743 transMapRefSeqV5,743 transMapRnaV5,743 transMapV5,849 finds transMapV5,158 finger uniprot,327 fingerprint gap,142 finished transMapEnsemblV5,360 transMapEstV5,329 transMapRefSeqV5,329 transMapRnaV5,329 transMapV5,435 first blastHg18KG,36 chainDanRer7,781 chainFr3,781 chainGalGal6,781 chainGasAcu1,781 chainHg19,781 chainMm10,781 chainNetDanRer7,784 chainNetFr3,784 chainNetGalGal6,784 chainNetGasAcu1,784 chainNetHg19,784 chainNetMm10,784 chainNetOryLat2,790 chainOryLat2,787 netDanRer7,781 netFr3,781 netGalGal6,781 netGasAcu1,781 netHg19,781 netMm10,781 netOryLat2,787 uniprot,70 xenoMrna,70 fish augustusGene,201 fit chainDanRer7,801 chainFr3,801 chainGalGal6,801 chainGasAcu1,801 chainHg19,801 chainMm10,801 chainNetDanRer7,804 chainNetFr3,804 chainNetGalGal6,804 chainNetGasAcu1,804 chainNetHg19,804 chainNetMm10,804 chainNetOryLat2,810 chainOryLat2,807 nestedRepeats,175 netDanRer7,801 netFr3,801 netGalGal6,801 netGasAcu1,801 netHg19,801 netMm10,801 netOryLat2,807 fix uniprot,851 flag nestedRepeats,287 flags nestedRepeats,289 fly augustusGene,214 fold tRNAs,308 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 following chainDanRer7,662 chainFr3,662 chainGalGal6,662 chainGasAcu1,662 chainHg19,662 chainMm10,662 chainNetDanRer7,665 chainNetFr3,665 chainNetGalGal6,665 chainNetGasAcu1,665 chainNetHg19,665 chainNetMm10,665 chainNetOryLat2,671 chainOryLat2,668 cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 gap,67 genscan,81 netDanRer7,662 netFr3,662 netGalGal6,662 netGasAcu1,662 netHg19,662 netMm10,662 netOryLat2,668 tRNAs,364 transMapEnsemblV5,586 transMapEstV5,555 transMapRefSeqV5,555 transMapRnaV5,555 transMapV5,661 windowmaskerSdust,56 follows genscan,67 mrna,31 transMapEnsemblV5,97 transMapEnsemblV5,214 transMapEstV5,66 transMapEstV5,183 transMapRefSeqV5,66 transMapRefSeqV5,183 transMapRnaV5,66 transMapRnaV5,183 transMapV5,172 transMapV5,289 xenoMrna,35 xenoRefGene,47 for augustusGene,34 augustusGene,52 augustusGene,68 augustusGene,80 augustusGene,175 augustusGene,184 augustusGene,192 augustusGene,232 augustusGene,253 augustusGene,260 augustusGene,274 blastHg18KG,147 chainDanRer7,254 chainDanRer7,269 chainDanRer7,279 chainDanRer7,286 chainDanRer7,486 chainFr3,254 chainFr3,269 chainFr3,279 chainFr3,286 chainFr3,486 chainGalGal6,254 chainGalGal6,269 chainGalGal6,279 chainGalGal6,286 chainGalGal6,486 chainGasAcu1,254 chainGasAcu1,269 chainGasAcu1,279 chainGasAcu1,286 chainGasAcu1,486 chainHg19,254 chainHg19,269 chainHg19,279 chainHg19,286 chainHg19,486 chainMm10,254 chainMm10,269 chainMm10,279 chainMm10,286 chainMm10,486 chainNetDanRer7,257 chainNetDanRer7,272 chainNetDanRer7,282 chainNetDanRer7,289 chainNetDanRer7,489 chainNetFr3,257 chainNetFr3,272 chainNetFr3,282 chainNetFr3,289 chainNetFr3,489 chainNetGalGal6,257 chainNetGalGal6,272 chainNetGalGal6,282 chainNetGalGal6,289 chainNetGalGal6,489 chainNetGasAcu1,257 chainNetGasAcu1,272 chainNetGasAcu1,282 chainNetGasAcu1,289 chainNetGasAcu1,489 chainNetHg19,257 chainNetHg19,272 chainNetHg19,282 chainNetHg19,289 chainNetHg19,489 chainNetMm10,257 chainNetMm10,272 chainNetMm10,282 chainNetMm10,289 chainNetMm10,489 chainNetOryLat2,261 chainNetOryLat2,276 chainNetOryLat2,286 chainNetOryLat2,293 chainNetOryLat2,495 chainOryLat2,258 chainOryLat2,273 chainOryLat2,283 chainOryLat2,290 chainOryLat2,492 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 cytoBandIdeo,5 ensGene,17 ensGene,30 ensGene,72 ensGene,79 ensGene,98 ensGene,152 ensGene,157 gap,157 gaze,58 gaze,83 gaze,114 gaze,122 gc5Base,64 genscan,49 genscan,71 genscan,124 genscan,131 genscan,174 gold,290 microsat,95 mrna,35 mrna,58 mrna,129 mrna,160 mrna,182 mrna,335 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 netDanRer7,254 netDanRer7,269 netDanRer7,279 netDanRer7,286 netDanRer7,486 netFr3,254 netFr3,269 netFr3,279 netFr3,286 netFr3,486 netGalGal6,254 netGalGal6,269 netGalGal6,279 netGalGal6,286 netGalGal6,486 netGasAcu1,254 netGasAcu1,269 netGasAcu1,279 netGasAcu1,286 netGasAcu1,486 netHg19,254 netHg19,269 netHg19,279 netHg19,286 netHg19,486 netMm10,254 netMm10,269 netMm10,279 netMm10,286 netMm10,486 netOryLat2,258 netOryLat2,273 netOryLat2,283 netOryLat2,290 netOryLat2,492 simpleRepeat,30 simpleRepeat,56 tRNAs,100 tRNAs,230 tRNAs,447 transMapEnsemblV5,41 transMapEnsemblV5,45 transMapEnsemblV5,67 transMapEnsemblV5,101 transMapEnsemblV5,129 transMapEnsemblV5,146 transMapEnsemblV5,189 transMapEnsemblV5,215 transMapEnsemblV5,233 transMapEnsemblV5,264 transMapEnsemblV5,266 transMapEnsemblV5,284 transMapEnsemblV5,288 transMapEnsemblV5,385 transMapEnsemblV5,399 transMapEnsemblV5,408 transMapEnsemblV5,444 transMapEnsemblV5,520 transMapEnsemblV5,535 transMapEnsemblV5,564 transMapEnsemblV5,628 transMapEnsemblV5,632 transMapEnsemblV5,656 transMapEnsemblV5,799 transMapEstV5,36 transMapEstV5,70 transMapEstV5,98 transMapEstV5,115 transMapEstV5,158 transMapEstV5,184 transMapEstV5,202 transMapEstV5,233 transMapEstV5,235 transMapEstV5,253 transMapEstV5,257 transMapEstV5,354 transMapEstV5,368 transMapEstV5,377 transMapEstV5,413 transMapEstV5,489 transMapEstV5,504 transMapEstV5,533 transMapEstV5,597 transMapEstV5,601 transMapEstV5,625 transMapEstV5,768 transMapRefSeqV5,36 transMapRefSeqV5,70 transMapRefSeqV5,98 transMapRefSeqV5,115 transMapRefSeqV5,158 transMapRefSeqV5,184 transMapRefSeqV5,202 transMapRefSeqV5,233 transMapRefSeqV5,235 transMapRefSeqV5,253 transMapRefSeqV5,257 transMapRefSeqV5,354 transMapRefSeqV5,368 transMapRefSeqV5,377 transMapRefSeqV5,413 transMapRefSeqV5,489 transMapRefSeqV5,504 transMapRefSeqV5,533 transMapRefSeqV5,597 transMapRefSeqV5,601 transMapRefSeqV5,625 transMapRefSeqV5,768 transMapRnaV5,36 transMapRnaV5,70 transMapRnaV5,98 transMapRnaV5,115 transMapRnaV5,158 transMapRnaV5,184 transMapRnaV5,202 transMapRnaV5,233 transMapRnaV5,235 transMapRnaV5,253 transMapRnaV5,257 transMapRnaV5,354 transMapRnaV5,368 transMapRnaV5,377 transMapRnaV5,413 transMapRnaV5,489 transMapRnaV5,504 transMapRnaV5,533 transMapRnaV5,597 transMapRnaV5,601 transMapRnaV5,625 transMapRnaV5,768 transMapV5,35 transMapV5,61 transMapV5,95 transMapV5,97 transMapV5,150 transMapV5,176 transMapV5,204 transMapV5,221 transMapV5,264 transMapV5,290 transMapV5,308 transMapV5,339 transMapV5,341 transMapV5,359 transMapV5,363 transMapV5,460 transMapV5,474 transMapV5,483 transMapV5,519 transMapV5,595 transMapV5,610 transMapV5,639 transMapV5,703 transMapV5,707 transMapV5,731 transMapV5,874 uniprot,75 uniprot,78 uniprot,401 uniprot,405 uniprot,462 uniprot,497 uniprot,532 uniprot,549 uniprot,697 uniprot,739 uniprot,743 uniprot,770 uniprot,842 uniprot,846 uniprot,861 uniprot,886 uniprot,964 uniprot,997 uniprot,1017 uniprot,1023 uniprot,1057 uniprot,1070 uniprot,1097 uniprot,1119 uniprot,1211 uniprot,1238 uniprot,1320 uniprot,1393 uniprot,1427 uniprot,1627 uniprot,1644 uniprot,1651 uniprot,1661 uniprot,1726 uniprot,1782 uniprot,1786 uniprot,1810 uniprot,1833 uniprot,1840 uniprot,1869 uniprot,1977 uniprot,1982 uniprot,2034 windowmaskerSdust,35 windowmaskerSdust,86 windowmaskerSdust,103 xenoMrna,39 xenoMrna,62 xenoMrna,132 xenoMrna,203 xenoMrna,234 xenoMrna,256 xenoMrna,409 xenoRefGene,19 xenoRefGene,51 xenoRefGene,173 form uniprot,1665 format chainDanRer7,601 chainFr3,601 chainGalGal6,601 chainGasAcu1,601 chainHg19,601 chainMm10,601 chainNetDanRer7,604 chainNetFr3,604 chainNetGalGal6,604 chainNetGasAcu1,604 chainNetHg19,604 chainNetMm10,604 chainNetOryLat2,610 chainOryLat2,607 ensGene,77 ensGene,97 netDanRer7,601 netFr3,601 netGalGal6,601 netGasAcu1,601 netHg19,601 netMm10,601 netOryLat2,607 transMapEnsemblV5,417 transMapEstV5,386 transMapRefSeqV5,386 transMapRnaV5,386 transMapV5,492 formats uniprot,885 uniprot,1865 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 forth chainDanRer7,435 chainFr3,435 chainGalGal6,435 chainGasAcu1,435 chainHg19,435 chainMm10,435 chainNetDanRer7,438 chainNetFr3,438 chainNetGalGal6,438 chainNetGasAcu1,438 chainNetHg19,438 chainNetMm10,438 chainNetOryLat2,444 chainOryLat2,441 netDanRer7,435 netFr3,435 netGalGal6,435 netGasAcu1,435 netHg19,435 netMm10,435 netOryLat2,441 found augustusGene,100 ensGene,139 gold,260 mrna,372 transMapEnsemblV5,640 transMapEstV5,609 transMapRefSeqV5,609 transMapRnaV5,609 transMapV5,715 uniprot,241 uniprot,1128 uniprot,1271 uniprot,1328 uniprot,1557 uniprot,1751 uniprot,1794 xenoMrna,445 four chainDanRer7,503 chainFr3,503 chainGalGal6,503 chainGasAcu1,503 chainHg19,503 chainMm10,503 chainNetDanRer7,506 chainNetFr3,506 chainNetGalGal6,506 chainNetGasAcu1,506 chainNetHg19,506 chainNetMm10,506 chainNetOryLat2,512 chainOryLat2,509 netDanRer7,503 netFr3,503 netGalGal6,503 netGasAcu1,503 netHg19,503 netMm10,503 netOryLat2,509 xenoMrna,117 fr3 chainFr3,7 chainFr3,69 chainFr3,303 chainNetFr3,8 chainNetFr3,72 chainNetFr3,306 chainNetFr3Viewchain,6 chainNetFr3Viewnet,6 netFr3,7 netFr3,69 netFr3,303 fragment gap,125 gold,168 fragments nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 framework gaze,82 france gold,23 free uniprot,1435 from augustusGene,19 blastHg18KG,22 blastHg18KG,40 chainDanRer7,173 chainDanRer7,298 chainDanRer7,555 chainDanRer7,577 chainDanRer7,758 chainDanRer7,931 chainDanRer7,963 chainFr3,173 chainFr3,298 chainFr3,555 chainFr3,577 chainFr3,758 chainFr3,931 chainFr3,963 chainGalGal6,173 chainGalGal6,298 chainGalGal6,555 chainGalGal6,577 chainGalGal6,758 chainGalGal6,931 chainGalGal6,963 chainGasAcu1,173 chainGasAcu1,298 chainGasAcu1,555 chainGasAcu1,577 chainGasAcu1,758 chainGasAcu1,931 chainGasAcu1,963 chainHg19,173 chainHg19,298 chainHg19,555 chainHg19,577 chainHg19,758 chainHg19,931 chainHg19,963 chainMm10,173 chainMm10,298 chainMm10,555 chainMm10,577 chainMm10,758 chainMm10,931 chainMm10,963 chainNetDanRer7,176 chainNetDanRer7,301 chainNetDanRer7,558 chainNetDanRer7,580 chainNetDanRer7,761 chainNetDanRer7,934 chainNetDanRer7,966 chainNetFr3,176 chainNetFr3,301 chainNetFr3,558 chainNetFr3,580 chainNetFr3,761 chainNetFr3,934 chainNetFr3,966 chainNetGalGal6,176 chainNetGalGal6,301 chainNetGalGal6,558 chainNetGalGal6,580 chainNetGalGal6,761 chainNetGalGal6,934 chainNetGalGal6,966 chainNetGasAcu1,176 chainNetGasAcu1,301 chainNetGasAcu1,558 chainNetGasAcu1,580 chainNetGasAcu1,761 chainNetGasAcu1,934 chainNetGasAcu1,966 chainNetHg19,176 chainNetHg19,301 chainNetHg19,558 chainNetHg19,580 chainNetHg19,761 chainNetHg19,934 chainNetHg19,966 chainNetMm10,176 chainNetMm10,301 chainNetMm10,558 chainNetMm10,580 chainNetMm10,761 chainNetMm10,934 chainNetMm10,966 chainNetOryLat2,180 chainNetOryLat2,305 chainNetOryLat2,564 chainNetOryLat2,586 chainNetOryLat2,767 chainNetOryLat2,940 chainNetOryLat2,972 chainOryLat2,177 chainOryLat2,302 chainOryLat2,561 chainOryLat2,583 chainOryLat2,764 chainOryLat2,937 chainOryLat2,969 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 ensGene,106 ensGene,112 gap,131 gaze,19 gaze,42 genscan,15 mrna,5 mrna,406 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 netDanRer7,173 netDanRer7,298 netDanRer7,555 netDanRer7,577 netDanRer7,758 netDanRer7,931 netDanRer7,963 netFr3,173 netFr3,298 netFr3,555 netFr3,577 netFr3,758 netFr3,931 netFr3,963 netGalGal6,173 netGalGal6,298 netGalGal6,555 netGalGal6,577 netGalGal6,758 netGalGal6,931 netGalGal6,963 netGasAcu1,173 netGasAcu1,298 netGasAcu1,555 netGasAcu1,577 netGasAcu1,758 netGasAcu1,931 netGasAcu1,963 netHg19,173 netHg19,298 netHg19,555 netHg19,577 netHg19,758 netHg19,931 netHg19,963 netMm10,173 netMm10,298 netMm10,555 netMm10,577 netMm10,758 netMm10,931 netMm10,963 netOryLat2,177 netOryLat2,302 netOryLat2,561 netOryLat2,583 netOryLat2,764 netOryLat2,937 netOryLat2,969 tRNAs,130 transMapEnsemblV5,29 transMapEnsemblV5,157 transMapEnsemblV5,555 transMapEnsemblV5,618 transMapEnsemblV5,683 transMapEstV5,27 transMapEstV5,126 transMapEstV5,524 transMapEstV5,587 transMapEstV5,652 transMapRefSeqV5,27 transMapRefSeqV5,126 transMapRefSeqV5,524 transMapRefSeqV5,587 transMapRefSeqV5,652 transMapRnaV5,27 transMapRnaV5,126 transMapRnaV5,524 transMapRnaV5,587 transMapRnaV5,652 transMapV5,26 transMapV5,111 transMapV5,232 transMapV5,630 transMapV5,693 transMapV5,758 uniprot,21 uniprot,36 uniprot,115 uniprot,198 uniprot,250 uniprot,557 uniprot,747 uniprot,831 uniprot,890 uniprot,915 uniprot,1507 uniprot,1696 uniprot,1742 uniprot,1772 uniprot,1844 uniprot,1953 uniprot,1962 windowmaskerSdust,41 xenoMrna,5 xenoMrna,24 xenoMrna,475 xenoRefGene,25 xenoRefGene,165 xenoRefGene,284 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 ftp windowmaskerSdust,44 fugu chainFr3,1 chainFr3,3 chainFr3,65 chainFr3,96 chainFr3,148 chainFr3,266 chainFr3,291 chainFr3,572 chainFr3,620 chainNetFr3,1 chainNetFr3,4 chainNetFr3,68 chainNetFr3,99 chainNetFr3,151 chainNetFr3,269 chainNetFr3,294 chainNetFr3,575 chainNetFr3,623 chainNetFr3Viewchain,2 chainNetFr3Viewnet,2 gaze,49 netFr3,1 netFr3,3 netFr3,65 netFr3,96 netFr3,148 netFr3,266 netFr3,291 netFr3,572 netFr3,620 fugu5 chainFr3,6 chainFr3,68 chainFr3,302 chainNetFr3,7 chainNetFr3,71 chainNetFr3,305 chainNetFr3Viewchain,5 chainNetFr3Viewnet,5 netFr3,6 netFr3,68 netFr3,302 full chainDanRer7,235 chainDanRer7,379 chainFr3,235 chainFr3,379 chainGalGal6,235 chainGalGal6,379 chainGasAcu1,235 chainGasAcu1,379 chainHg19,235 chainHg19,379 chainMm10,235 chainMm10,379 chainNetDanRer7,238 chainNetDanRer7,382 chainNetFr3,238 chainNetFr3,382 chainNetGalGal6,238 chainNetGalGal6,382 chainNetGasAcu1,238 chainNetGasAcu1,382 chainNetHg19,238 chainNetHg19,382 chainNetMm10,238 chainNetMm10,382 chainNetOryLat2,242 chainNetOryLat2,388 chainOryLat2,239 chainOryLat2,385 nestedRepeats,118 netDanRer7,235 netDanRer7,379 netFr3,235 netFr3,379 netGalGal6,235 netGalGal6,379 netGasAcu1,235 netGasAcu1,379 netHg19,235 netHg19,379 netMm10,235 netMm10,379 netOryLat2,239 netOryLat2,385 transMapEnsemblV5,52 transMapEnsemblV5,278 transMapEstV5,247 transMapRefSeqV5,247 transMapRnaV5,247 transMapV5,353 uniprot,486 uniprot,528 uniprot,540 function tRNAs,154 functional tRNAs,145 tRNAs,172 tRNAs,221 furthermore augustusGene,64 g cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 ensGene,175 gc5Base,20 microsat,115 simpleRepeat,75 tRNAs,477 g-25-100100-90 chainDanRer7,670 chainFr3,670 chainGalGal6,670 chainHg19,670 chainMm10,670 chainNetDanRer7,673 chainNetFr3,673 chainNetGalGal6,673 chainNetHg19,673 chainNetMm10,673 chainNetOryLat2,679 chainOryLat2,676 netDanRer7,670 netFr3,670 netGalGal6,670 netHg19,670 netMm10,670 netOryLat2,676 g-31-125100-114 chainGasAcu1,670 chainNetGasAcu1,673 netGasAcu1,670 ga tRNAs,418 galgal6 chainGalGal6,7 chainGalGal6,69 chainGalGal6,303 chainNetGalGal6,8 chainNetGalGal6,72 chainNetGalGal6,306 chainNetGalGal6Viewchain,6 chainNetGalGal6Viewnet,6 netGalGal6,7 netGalGal6,69 netGalGal6,303 gambiae augustusGene,219 gap blastHg18KG,92 blastHg18KG,96 chainDanRer7,76 chainDanRer7,86 chainDanRer7,185 chainDanRer7,472 chainDanRer7,484 chainDanRer7,507 chainDanRer7,525 chainDanRer7,540 chainDanRer7,557 chainDanRer7,694 chainDanRer7,825 chainFr3,76 chainFr3,86 chainFr3,185 chainFr3,472 chainFr3,484 chainFr3,507 chainFr3,525 chainFr3,540 chainFr3,557 chainFr3,694 chainFr3,825 chainGalGal6,76 chainGalGal6,86 chainGalGal6,185 chainGalGal6,472 chainGalGal6,484 chainGalGal6,507 chainGalGal6,525 chainGalGal6,540 chainGalGal6,557 chainGalGal6,694 chainGalGal6,825 chainGasAcu1,76 chainGasAcu1,86 chainGasAcu1,185 chainGasAcu1,472 chainGasAcu1,484 chainGasAcu1,507 chainGasAcu1,525 chainGasAcu1,540 chainGasAcu1,557 chainGasAcu1,694 chainGasAcu1,825 chainHg19,76 chainHg19,86 chainHg19,185 chainHg19,472 chainHg19,484 chainHg19,507 chainHg19,525 chainHg19,540 chainHg19,557 chainHg19,694 chainHg19,825 chainMm10,76 chainMm10,86 chainMm10,185 chainMm10,472 chainMm10,484 chainMm10,507 chainMm10,525 chainMm10,540 chainMm10,557 chainMm10,694 chainMm10,825 chainNetDanRer7,79 chainNetDanRer7,89 chainNetDanRer7,188 chainNetDanRer7,475 chainNetDanRer7,487 chainNetDanRer7,510 chainNetDanRer7,528 chainNetDanRer7,543 chainNetDanRer7,560 chainNetDanRer7,697 chainNetDanRer7,828 chainNetFr3,79 chainNetFr3,89 chainNetFr3,188 chainNetFr3,475 chainNetFr3,487 chainNetFr3,510 chainNetFr3,528 chainNetFr3,543 chainNetFr3,560 chainNetFr3,697 chainNetFr3,828 chainNetGalGal6,79 chainNetGalGal6,89 chainNetGalGal6,188 chainNetGalGal6,475 chainNetGalGal6,487 chainNetGalGal6,510 chainNetGalGal6,528 chainNetGalGal6,543 chainNetGalGal6,560 chainNetGalGal6,697 chainNetGalGal6,828 chainNetGasAcu1,79 chainNetGasAcu1,89 chainNetGasAcu1,188 chainNetGasAcu1,475 chainNetGasAcu1,487 chainNetGasAcu1,510 chainNetGasAcu1,528 chainNetGasAcu1,543 chainNetGasAcu1,560 chainNetGasAcu1,697 chainNetGasAcu1,828 chainNetHg19,79 chainNetHg19,89 chainNetHg19,188 chainNetHg19,475 chainNetHg19,487 chainNetHg19,510 chainNetHg19,528 chainNetHg19,543 chainNetHg19,560 chainNetHg19,697 chainNetHg19,828 chainNetMm10,79 chainNetMm10,89 chainNetMm10,188 chainNetMm10,475 chainNetMm10,487 chainNetMm10,510 chainNetMm10,528 chainNetMm10,543 chainNetMm10,560 chainNetMm10,697 chainNetMm10,828 chainNetOryLat2,83 chainNetOryLat2,93 chainNetOryLat2,192 chainNetOryLat2,481 chainNetOryLat2,493 chainNetOryLat2,516 chainNetOryLat2,534 chainNetOryLat2,549 chainNetOryLat2,566 chainNetOryLat2,703 chainNetOryLat2,834 chainOryLat2,80 chainOryLat2,90 chainOryLat2,189 chainOryLat2,478 chainOryLat2,490 chainOryLat2,513 chainOryLat2,531 chainOryLat2,546 chainOryLat2,563 chainOryLat2,700 chainOryLat2,831 gap,1 gap,2 gap,38 gap,49 gap,62 gap,126 netDanRer7,76 netDanRer7,86 netDanRer7,185 netDanRer7,472 netDanRer7,484 netDanRer7,507 netDanRer7,525 netDanRer7,540 netDanRer7,557 netDanRer7,694 netDanRer7,825 netFr3,76 netFr3,86 netFr3,185 netFr3,472 netFr3,484 netFr3,507 netFr3,525 netFr3,540 netFr3,557 netFr3,694 netFr3,825 netGalGal6,76 netGalGal6,86 netGalGal6,185 netGalGal6,472 netGalGal6,484 netGalGal6,507 netGalGal6,525 netGalGal6,540 netGalGal6,557 netGalGal6,694 netGalGal6,825 netGasAcu1,76 netGasAcu1,86 netGasAcu1,185 netGasAcu1,472 netGasAcu1,484 netGasAcu1,507 netGasAcu1,525 netGasAcu1,540 netGasAcu1,557 netGasAcu1,694 netGasAcu1,825 netHg19,76 netHg19,86 netHg19,185 netHg19,472 netHg19,484 netHg19,507 netHg19,525 netHg19,540 netHg19,557 netHg19,694 netHg19,825 netMm10,76 netMm10,86 netMm10,185 netMm10,472 netMm10,484 netMm10,507 netMm10,525 netMm10,540 netMm10,557 netMm10,694 netMm10,825 netOryLat2,80 netOryLat2,90 netOryLat2,189 netOryLat2,478 netOryLat2,490 netOryLat2,513 netOryLat2,531 netOryLat2,546 netOryLat2,563 netOryLat2,700 netOryLat2,831 transMapEnsemblV5,141 transMapEstV5,110 transMapRefSeqV5,110 transMapRnaV5,110 transMapV5,216 gapless chainDanRer7,637 chainFr3,637 chainGalGal6,637 chainGasAcu1,637 chainHg19,637 chainMm10,637 chainNetDanRer7,640 chainNetFr3,640 chainNetGalGal6,640 chainNetGasAcu1,640 chainNetHg19,640 chainNetMm10,640 chainNetOryLat2,646 chainOryLat2,643 netDanRer7,637 netFr3,637 netGalGal6,637 netGasAcu1,637 netHg19,637 netMm10,637 netOryLat2,643 gaps chainDanRer7,82 chainDanRer7,93 chainDanRer7,104 chainDanRer7,138 chainDanRer7,162 chainDanRer7,207 chainDanRer7,218 chainDanRer7,399 chainDanRer7,421 chainDanRer7,448 chainDanRer7,880 chainDanRer7,886 chainFr3,82 chainFr3,93 chainFr3,104 chainFr3,138 chainFr3,162 chainFr3,207 chainFr3,218 chainFr3,399 chainFr3,421 chainFr3,448 chainFr3,880 chainFr3,886 chainGalGal6,82 chainGalGal6,93 chainGalGal6,104 chainGalGal6,138 chainGalGal6,162 chainGalGal6,207 chainGalGal6,218 chainGalGal6,399 chainGalGal6,421 chainGalGal6,448 chainGalGal6,880 chainGalGal6,886 chainGasAcu1,82 chainGasAcu1,93 chainGasAcu1,104 chainGasAcu1,138 chainGasAcu1,162 chainGasAcu1,207 chainGasAcu1,218 chainGasAcu1,399 chainGasAcu1,421 chainGasAcu1,448 chainGasAcu1,880 chainGasAcu1,886 chainHg19,82 chainHg19,93 chainHg19,104 chainHg19,138 chainHg19,162 chainHg19,207 chainHg19,218 chainHg19,399 chainHg19,421 chainHg19,448 chainHg19,880 chainHg19,886 chainMm10,82 chainMm10,93 chainMm10,104 chainMm10,138 chainMm10,162 chainMm10,207 chainMm10,218 chainMm10,399 chainMm10,421 chainMm10,448 chainMm10,880 chainMm10,886 chainNetDanRer7,85 chainNetDanRer7,96 chainNetDanRer7,107 chainNetDanRer7,141 chainNetDanRer7,165 chainNetDanRer7,210 chainNetDanRer7,221 chainNetDanRer7,402 chainNetDanRer7,424 chainNetDanRer7,451 chainNetDanRer7,883 chainNetDanRer7,889 chainNetFr3,85 chainNetFr3,96 chainNetFr3,107 chainNetFr3,141 chainNetFr3,165 chainNetFr3,210 chainNetFr3,221 chainNetFr3,402 chainNetFr3,424 chainNetFr3,451 chainNetFr3,883 chainNetFr3,889 chainNetGalGal6,85 chainNetGalGal6,96 chainNetGalGal6,107 chainNetGalGal6,141 chainNetGalGal6,165 chainNetGalGal6,210 chainNetGalGal6,221 chainNetGalGal6,402 chainNetGalGal6,424 chainNetGalGal6,451 chainNetGalGal6,883 chainNetGalGal6,889 chainNetGasAcu1,85 chainNetGasAcu1,96 chainNetGasAcu1,107 chainNetGasAcu1,141 chainNetGasAcu1,165 chainNetGasAcu1,210 chainNetGasAcu1,221 chainNetGasAcu1,402 chainNetGasAcu1,424 chainNetGasAcu1,451 chainNetGasAcu1,883 chainNetGasAcu1,889 chainNetHg19,85 chainNetHg19,96 chainNetHg19,107 chainNetHg19,141 chainNetHg19,165 chainNetHg19,210 chainNetHg19,221 chainNetHg19,402 chainNetHg19,424 chainNetHg19,451 chainNetHg19,883 chainNetHg19,889 chainNetMm10,85 chainNetMm10,96 chainNetMm10,107 chainNetMm10,141 chainNetMm10,165 chainNetMm10,210 chainNetMm10,221 chainNetMm10,402 chainNetMm10,424 chainNetMm10,451 chainNetMm10,883 chainNetMm10,889 chainNetOryLat2,89 chainNetOryLat2,100 chainNetOryLat2,111 chainNetOryLat2,145 chainNetOryLat2,169 chainNetOryLat2,214 chainNetOryLat2,225 chainNetOryLat2,408 chainNetOryLat2,430 chainNetOryLat2,457 chainNetOryLat2,889 chainNetOryLat2,895 chainOryLat2,86 chainOryLat2,97 chainOryLat2,108 chainOryLat2,142 chainOryLat2,166 chainOryLat2,211 chainOryLat2,222 chainOryLat2,405 chainOryLat2,427 chainOryLat2,454 chainOryLat2,886 chainOryLat2,892 gap,11 gap,15 gap,71 gap,73 gap,136 gap,156 gap,195 gold,93 netDanRer7,82 netDanRer7,93 netDanRer7,104 netDanRer7,138 netDanRer7,162 netDanRer7,207 netDanRer7,218 netDanRer7,399 netDanRer7,421 netDanRer7,448 netDanRer7,880 netDanRer7,886 netFr3,82 netFr3,93 netFr3,104 netFr3,138 netFr3,162 netFr3,207 netFr3,218 netFr3,399 netFr3,421 netFr3,448 netFr3,880 netFr3,886 netGalGal6,82 netGalGal6,93 netGalGal6,104 netGalGal6,138 netGalGal6,162 netGalGal6,207 netGalGal6,218 netGalGal6,399 netGalGal6,421 netGalGal6,448 netGalGal6,880 netGalGal6,886 netGasAcu1,82 netGasAcu1,93 netGasAcu1,104 netGasAcu1,138 netGasAcu1,162 netGasAcu1,207 netGasAcu1,218 netGasAcu1,399 netGasAcu1,421 netGasAcu1,448 netGasAcu1,880 netGasAcu1,886 netHg19,82 netHg19,93 netHg19,104 netHg19,138 netHg19,162 netHg19,207 netHg19,218 netHg19,399 netHg19,421 netHg19,448 netHg19,880 netHg19,886 netMm10,82 netMm10,93 netMm10,104 netMm10,138 netMm10,162 netMm10,207 netMm10,218 netMm10,399 netMm10,421 netMm10,448 netMm10,880 netMm10,886 netOryLat2,86 netOryLat2,97 netOryLat2,108 netOryLat2,142 netOryLat2,166 netOryLat2,211 netOryLat2,222 netOryLat2,405 netOryLat2,427 netOryLat2,454 netOryLat2,886 netOryLat2,892 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gasacu1 chainGasAcu1,7 chainGasAcu1,69 chainGasAcu1,303 chainNetGasAcu1,8 chainNetGasAcu1,72 chainNetGasAcu1,306 chainNetGasAcu1Viewchain,6 chainNetGasAcu1Viewnet,6 netGasAcu1,7 netGasAcu1,69 netGasAcu1,303 gasteiger uniprot,2020 gattiker uniprot,2016 gaze gaze,2 gaze,6 gaze,21 gaze,32 gaze,39 gaze,63 gaze,79 gaze,103 gbdb transMapEnsemblV5,661 transMapEstV5,630 transMapRefSeqV5,630 transMapRnaV5,630 transMapV5,736 uniprot,1815 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 gc5Base,1 gc5Base,3 gc5Base,13 gc5Base,30 genbank gold,262 mrna,6 mrna,21 mrna,344 mrna,431 transMapEnsemblV5,171 transMapEnsemblV5,174 transMapEstV5,16 transMapEstV5,140 transMapEstV5,143 transMapRefSeqV5,140 transMapRefSeqV5,143 transMapRnaV5,4 transMapRnaV5,17 transMapRnaV5,140 transMapRnaV5,143 transMapV5,246 transMapV5,249 uniprot,376 xenoMrna,6 xenoMrna,23 xenoMrna,500 gencode transMapEnsemblV5,6 transMapEnsemblV5,18 transMapEnsemblV5,38 transMapEnsemblV5,707 transMapEstV5,676 transMapRefSeqV5,676 transMapRnaV5,676 transMapV5,782 uniprot,730 gene augustusGene,5 augustusGene,10 augustusGene,40 augustusGene,112 augustusGene,157 augustusGene,163 augustusGene,305 augustusGene,320 blastHg18KG,11 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 ensGene,7 ensGene,11 ensGene,23 ensGene,39 ensGene,58 ensGene,155 gaze,9 gaze,16 gaze,37 genscan,4 genscan,8 genscan,55 genscan,72 genscan,111 genscan,117 genscan,214 tRNAs,11 tRNAs,141 transMapEnsemblV5,12 transMapEnsemblV5,53 transMapEnsemblV5,59 transMapEnsemblV5,390 transMapEnsemblV5,773 transMapEstV5,10 transMapEstV5,359 transMapEstV5,742 transMapRefSeqV5,5 transMapRefSeqV5,11 transMapRefSeqV5,18 transMapRefSeqV5,359 transMapRefSeqV5,742 transMapRnaV5,11 transMapRnaV5,359 transMapRnaV5,742 transMapV5,9 transMapV5,17 transMapV5,465 transMapV5,848 unipAliSwissprot,20 unipAliTrembl,12 unipChain,10 unipConflict,8 unipDisulfBond,8 unipDomain,6 unipInterest,8 unipLocCytopl,7 unipLocExtra,7 unipLocSignal,8 unipLocTransMemb,7 unipModif,9 unipMut,8 unipOther,8 unipRepeat,6 unipStruct,10 uniprot,9 uniprot,732 uniprot,1025 uniprot,1050 uniprot,1059 uniprot,1080 uniprot,1281 uniprot,1394 xenoRefGene,8 xenoRefGene,52 xenoRefGene,106 xenoRefGene,121 xenoRefGene,126 xenoRefGene,154 xenoRefGene,183 gene-prediction gaze,87 gene-rich gc5Base,36 genedx uniprot,1973 geneid gaze,43 genepred ensGene,76 general gap,145 generally uniprot,248 generate nestedRepeats,261 nestedRepeats,320 generated cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 ensGene,14 gold,213 nestedRepeats,282 xenoRefGene,288 generating augustusGene,189 generic gaze,81 genes augustusGene,8 augustusGene,44 blastHg18KG,9 blastHg18KG,27 blastHg18KG,33 blastHg18KG,44 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 ensGene,2 ensGene,4 ensGene,5 ensGene,27 ensGene,92 gaze,7 genscan,2 genscan,6 genscan,59 simpleRepeat,41 tRNAs,2 tRNAs,5 tRNAs,9 tRNAs,18 tRNAs,174 tRNAs,244 tRNAs,286 tRNAs,304 tRNAs,376 tRNAs,424 tRNAs,453 tRNAs,485 transMapEnsemblV5,10 transMapEnsemblV5,88 transMapEnsemblV5,170 transMapEnsemblV5,184 transMapEnsemblV5,290 transMapEnsemblV5,803 transMapEstV5,8 transMapEstV5,57 transMapEstV5,139 transMapEstV5,153 transMapEstV5,259 transMapEstV5,772 transMapRefSeqV5,9 transMapRefSeqV5,57 transMapRefSeqV5,139 transMapRefSeqV5,153 transMapRefSeqV5,259 transMapRefSeqV5,772 transMapRnaV5,9 transMapRnaV5,57 transMapRnaV5,139 transMapRnaV5,153 transMapRnaV5,259 transMapRnaV5,772 transMapV5,7 transMapV5,58 transMapV5,72 transMapV5,245 transMapV5,259 transMapV5,365 transMapV5,878 unipAliSwissprot,18 unipAliTrembl,10 unipChain,8 unipConflict,6 unipDisulfBond,6 unipDomain,4 unipInterest,6 unipLocCytopl,5 unipLocExtra,5 unipLocSignal,6 unipLocTransMemb,5 unipModif,7 unipMut,6 unipOther,6 unipRepeat,4 unipStruct,8 uniprot,7 uniprot,1300 xenoRefGene,5 xenoRefGene,6 xenoRefGene,18 xenoRefGene,192 xenoRefGene,200 xenoRefGene,211 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 genetic nestedRepeats,52 genewise gaze,50 genome augustusGene,31 blastHg18KG,51 chainDanRer7,19 chainDanRer7,73 chainDanRer7,202 chainDanRer7,275 chainDanRer7,288 chainDanRer7,779 chainDanRer7,1100 chainFr3,19 chainFr3,73 chainFr3,202 chainFr3,275 chainFr3,288 chainFr3,779 chainFr3,1100 chainGalGal6,19 chainGalGal6,73 chainGalGal6,202 chainGalGal6,275 chainGalGal6,288 chainGalGal6,779 chainGalGal6,1100 chainGasAcu1,19 chainGasAcu1,73 chainGasAcu1,202 chainGasAcu1,275 chainGasAcu1,288 chainGasAcu1,779 chainGasAcu1,1100 chainHg19,19 chainHg19,73 chainHg19,202 chainHg19,275 chainHg19,288 chainHg19,779 chainHg19,1100 chainMm10,19 chainMm10,73 chainMm10,202 chainMm10,275 chainMm10,288 chainMm10,779 chainMm10,1100 chainNetDanRer7,22 chainNetDanRer7,76 chainNetDanRer7,205 chainNetDanRer7,278 chainNetDanRer7,291 chainNetDanRer7,782 chainNetDanRer7,1103 chainNetFr3,22 chainNetFr3,76 chainNetFr3,205 chainNetFr3,278 chainNetFr3,291 chainNetFr3,782 chainNetFr3,1103 chainNetGalGal6,22 chainNetGalGal6,76 chainNetGalGal6,205 chainNetGalGal6,278 chainNetGalGal6,291 chainNetGalGal6,782 chainNetGalGal6,1103 chainNetGasAcu1,22 chainNetGasAcu1,76 chainNetGasAcu1,205 chainNetGasAcu1,278 chainNetGasAcu1,291 chainNetGasAcu1,782 chainNetGasAcu1,1103 chainNetHg19,22 chainNetHg19,76 chainNetHg19,205 chainNetHg19,278 chainNetHg19,291 chainNetHg19,782 chainNetHg19,1103 chainNetMm10,22 chainNetMm10,76 chainNetMm10,205 chainNetMm10,278 chainNetMm10,291 chainNetMm10,782 chainNetMm10,1103 chainNetOryLat2,24 chainNetOryLat2,80 chainNetOryLat2,209 chainNetOryLat2,282 chainNetOryLat2,295 chainNetOryLat2,788 chainNetOryLat2,1109 chainOryLat2,21 chainOryLat2,77 chainOryLat2,206 chainOryLat2,279 chainOryLat2,292 chainOryLat2,785 chainOryLat2,1106 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 ensGene,164 ensGene,192 gap,77 gap,108 gaze,92 gaze,117 gold,48 gold,131 gold,136 gold,183 gold,225 gold,248 gold,278 gold,291 mrna,24 mrna,351 mrna,454 nestedRepeats,405 netDanRer7,19 netDanRer7,73 netDanRer7,202 netDanRer7,275 netDanRer7,288 netDanRer7,779 netDanRer7,1100 netFr3,19 netFr3,73 netFr3,202 netFr3,275 netFr3,288 netFr3,779 netFr3,1100 netGalGal6,19 netGalGal6,73 netGalGal6,202 netGalGal6,275 netGalGal6,288 netGalGal6,779 netGalGal6,1100 netGasAcu1,19 netGasAcu1,73 netGasAcu1,202 netGasAcu1,275 netGasAcu1,288 netGasAcu1,779 netGasAcu1,1100 netHg19,19 netHg19,73 netHg19,202 netHg19,275 netHg19,288 netHg19,779 netHg19,1100 netMm10,19 netMm10,73 netMm10,202 netMm10,275 netMm10,288 netMm10,779 netMm10,1100 netOryLat2,21 netOryLat2,77 netOryLat2,206 netOryLat2,279 netOryLat2,292 netOryLat2,785 netOryLat2,1106 transMapEnsemblV5,36 transMapEnsemblV5,163 transMapEnsemblV5,180 transMapEnsemblV5,204 transMapEnsemblV5,333 transMapEnsemblV5,344 transMapEnsemblV5,405 transMapEnsemblV5,415 transMapEnsemblV5,449 transMapEnsemblV5,472 transMapEnsemblV5,605 transMapEnsemblV5,743 transMapEstV5,34 transMapEstV5,132 transMapEstV5,149 transMapEstV5,173 transMapEstV5,302 transMapEstV5,313 transMapEstV5,374 transMapEstV5,384 transMapEstV5,418 transMapEstV5,441 transMapEstV5,574 transMapEstV5,712 transMapRefSeqV5,34 transMapRefSeqV5,132 transMapRefSeqV5,149 transMapRefSeqV5,173 transMapRefSeqV5,302 transMapRefSeqV5,313 transMapRefSeqV5,374 transMapRefSeqV5,384 transMapRefSeqV5,418 transMapRefSeqV5,441 transMapRefSeqV5,574 transMapRefSeqV5,712 transMapRnaV5,34 transMapRnaV5,132 transMapRnaV5,149 transMapRnaV5,173 transMapRnaV5,302 transMapRnaV5,313 transMapRnaV5,374 transMapRnaV5,384 transMapRnaV5,418 transMapRnaV5,441 transMapRnaV5,574 transMapRnaV5,712 transMapV5,33 transMapV5,84 transMapV5,238 transMapV5,255 transMapV5,279 transMapV5,408 transMapV5,419 transMapV5,480 transMapV5,490 transMapV5,524 transMapV5,547 transMapV5,680 transMapV5,818 unipAliSwissprot,9 unipAliTrembl,9 uniprot,88 uniprot,103 uniprot,120 uniprot,203 uniprot,216 uniprot,609 uniprot,642 uniprot,717 uniprot,749 uniprot,803 uniprot,811 uniprot,910 uniprot,1141 uniprot,1377 uniprot,1494 uniprot,1520 uniprot,1543 uniprot,1730 uniprot,1847 uniprot,1858 uniprot,1891 xenoMrna,425 xenoMrna,523 xenoRefGene,223 xenoRefGene,306 genome.bed uniprot,1935 uniprot,1937 genomes chainDanRer7,25 chainDanRer7,582 chainDanRer7,1062 chainFr3,25 chainFr3,582 chainFr3,1062 chainGalGal6,25 chainGalGal6,582 chainGalGal6,1062 chainGasAcu1,25 chainGasAcu1,582 chainGasAcu1,1062 chainHg19,25 chainHg19,582 chainHg19,1062 chainMm10,25 chainMm10,582 chainMm10,1062 chainNetDanRer7,28 chainNetDanRer7,585 chainNetDanRer7,1065 chainNetFr3,28 chainNetFr3,585 chainNetFr3,1065 chainNetGalGal6,28 chainNetGalGal6,585 chainNetGalGal6,1065 chainNetGasAcu1,28 chainNetGasAcu1,585 chainNetGasAcu1,1065 chainNetHg19,28 chainNetHg19,585 chainNetHg19,1065 chainNetMm10,28 chainNetMm10,585 chainNetMm10,1065 chainNetOryLat2,30 chainNetOryLat2,591 chainNetOryLat2,1071 chainOryLat2,27 chainOryLat2,588 chainOryLat2,1068 cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 netDanRer7,25 netDanRer7,582 netDanRer7,1062 netFr3,25 netFr3,582 netFr3,1062 netGalGal6,25 netGalGal6,582 netGalGal6,1062 netGasAcu1,25 netGasAcu1,582 netGasAcu1,1062 netHg19,25 netHg19,582 netHg19,1062 netMm10,25 netMm10,582 netMm10,1062 netOryLat2,27 netOryLat2,588 netOryLat2,1068 transMapEnsemblV5,361 transMapEnsemblV5,369 transMapEstV5,330 transMapEstV5,338 transMapRefSeqV5,330 transMapRefSeqV5,338 transMapRnaV5,330 transMapRnaV5,338 transMapV5,436 transMapV5,444 uniprot,863 uniprot,941 windowmaskerSdust,105 xenoRefGene,375 genomic chainDanRer7,491 chainDanRer7,1014 chainDanRer7,1030 chainFr3,491 chainFr3,1014 chainFr3,1030 chainGalGal6,491 chainGalGal6,1014 chainGalGal6,1030 chainGasAcu1,491 chainGasAcu1,1014 chainGasAcu1,1030 chainHg19,491 chainHg19,1014 chainHg19,1030 chainMm10,491 chainMm10,1014 chainMm10,1030 chainNetDanRer7,494 chainNetDanRer7,1017 chainNetDanRer7,1033 chainNetFr3,494 chainNetFr3,1017 chainNetFr3,1033 chainNetGalGal6,494 chainNetGalGal6,1017 chainNetGalGal6,1033 chainNetGasAcu1,494 chainNetGasAcu1,1017 chainNetGasAcu1,1033 chainNetHg19,494 chainNetHg19,1017 chainNetHg19,1033 chainNetMm10,494 chainNetMm10,1017 chainNetMm10,1033 chainNetOryLat2,500 chainNetOryLat2,1023 chainNetOryLat2,1039 chainOryLat2,497 chainOryLat2,1020 chainOryLat2,1036 gaze,109 genscan,92 genscan,218 mrna,333 mrna,393 netDanRer7,491 netDanRer7,1014 netDanRer7,1030 netFr3,491 netFr3,1014 netFr3,1030 netGalGal6,491 netGalGal6,1014 netGalGal6,1030 netGasAcu1,491 netGasAcu1,1014 netGasAcu1,1030 netHg19,491 netHg19,1014 netHg19,1030 netMm10,491 netMm10,1014 netMm10,1030 netOryLat2,497 netOryLat2,1020 netOryLat2,1036 tRNAs,108 tRNAs,379 tRNAs,426 tRNAs,455 tRNAs,487 transMapEnsemblV5,127 transMapEstV5,96 transMapRefSeqV5,96 transMapRnaV5,96 transMapV5,202 uniprot,28 uniprot,450 windowmaskerSdust,3 xenoMrna,100 xenoMrna,407 xenoRefGene,162 xenoRefGene,273 genomics chainDanRer7,11 chainFr3,11 chainGalGal6,11 chainGasAcu1,11 chainHg19,11 chainMm10,11 chainNetDanRer7,14 chainNetDanRer7Viewchain,12 chainNetDanRer7Viewnet,12 chainNetFr3,14 chainNetFr3Viewchain,12 chainNetFr3Viewnet,12 chainNetGalGal6,14 chainNetGalGal6Viewchain,12 chainNetGalGal6Viewnet,12 chainNetGasAcu1,14 chainNetGasAcu1Viewchain,12 chainNetGasAcu1Viewnet,12 chainNetHg19,14 chainNetHg19Viewchain,12 chainNetHg19Viewnet,12 chainNetMm10,14 chainNetMm10Viewchain,12 chainNetMm10Viewnet,12 chainNetOryLat2,16 chainNetOryLat2Viewchain,14 chainNetOryLat2Viewnet,14 chainOryLat2,13 netDanRer7,11 netFr3,11 netGalGal6,11 netGasAcu1,11 netHg19,11 netMm10,11 netOryLat2,13 transMapEnsemblV5,742 transMapEnsemblV5,797 transMapEstV5,711 transMapEstV5,766 transMapRefSeqV5,711 transMapRefSeqV5,766 transMapRnaV5,711 transMapRnaV5,766 transMapV5,817 transMapV5,872 genoscope gaze,1 gaze,3 gaze,15 gaze,121 gold,21 gold,241 gold,286 genscan gaze,44 genscan,1 genscan,3 genscan,17 genscan,136 genscan,177 gertz windowmaskerSdust,92 gigabases tRNAs,96 giri nestedRepeats,56 nestedRepeats,310 gish blastHg18KG,155 github uniprot,1559 give transMapEnsemblV5,437 transMapEstV5,406 transMapRefSeqV5,406 transMapRnaV5,406 transMapV5,512 xenoMrna,110 given transMapEnsemblV5,481 transMapEnsemblV5,654 transMapEstV5,450 transMapEstV5,623 transMapRefSeqV5,450 transMapRefSeqV5,623 transMapRnaV5,450 transMapRnaV5,623 transMapV5,556 transMapV5,729 uniprot,741 uniprot,1235 uniprot,1240 uniprot,1808 global transMapEnsemblV5,354 transMapEstV5,323 transMapRefSeqV5,323 transMapRnaV5,323 transMapV5,429 glyco uniprot,469 glycosylation uniprot,341 uniprot,584 go genscan,113 uniprot,1412 xenoRefGene,179 gold gold,88 gold,103 golden gold,71 goldenpath uniprot,1907 gr xenoRefGene,320 graph gc5Base,59 gc5Base,78 graphical chainDanRer7,438 chainFr3,438 chainGalGal6,438 chainGasAcu1,438 chainHg19,438 chainMm10,438 chainNetDanRer7,441 chainNetFr3,441 chainNetGalGal6,441 chainNetGasAcu1,441 chainNetHg19,441 chainNetMm10,441 chainNetOryLat2,447 chainOryLat2,444 netDanRer7,438 netFr3,438 netGalGal6,438 netGasAcu1,438 netHg19,438 netMm10,438 netOryLat2,444 grcg6a chainGalGal6,6 chainGalGal6,68 chainGalGal6,302 chainNetGalGal6,7 chainNetGalGal6,71 chainNetGalGal6,305 chainNetGalGal6Viewchain,5 chainNetGalGal6Viewnet,5 netGalGal6,6 netGalGal6,68 netGalGal6,302 grch37 chainHg19,6 chainHg19,68 chainHg19,302 chainNetHg19,7 chainNetHg19,71 chainNetHg19,305 chainNetHg19Viewchain,5 chainNetHg19Viewnet,5 netHg19,6 netHg19,68 netHg19,302 grcm38 chainMm10,6 chainMm10,68 chainMm10,302 chainNetMm10,7 chainNetMm10,71 chainNetMm10,305 chainNetMm10Viewchain,5 chainNetMm10Viewnet,5 netMm10,6 netMm10,68 netMm10,302 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 uniprot,588 uniprot,593 grey tRNAs,206 group augustusGene,198 augustusGene,235 chainDanRer7,629 chainFr3,629 chainGalGal6,629 chainGasAcu1,629 chainHg19,629 chainMm10,629 chainNetDanRer7,632 chainNetFr3,632 chainNetGalGal6,632 chainNetGasAcu1,632 chainNetHg19,632 chainNetMm10,632 chainNetOryLat2,638 chainOryLat2,635 netDanRer7,629 netFr3,629 netGalGal6,629 netGasAcu1,629 netHg19,629 netMm10,629 netOryLat2,635 uniprot,430 groups augustusGene,194 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 tRNAs,165 uniprot,907 uniprot,909 uniprot,1930 gtf ensGene,96 gtrnadb tRNAs,111 tRNAs,332 tRNAs,370 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5Base,21 guess tRNAs,256 guides tRNAs,261 h uniprot,2013 had transMapEnsemblV5,194 transMapEstV5,163 transMapRefSeqV5,163 transMapRnaV5,163 transMapV5,269 haeussler uniprot,1945 handful uniprot,1180 haplotype uniprot,852 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hardison chainDanRer7,933 chainDanRer7,1090 chainFr3,933 chainFr3,1090 chainGalGal6,933 chainGalGal6,1090 chainGasAcu1,933 chainGasAcu1,1090 chainHg19,933 chainHg19,1090 chainMm10,933 chainMm10,1090 chainNetDanRer7,936 chainNetDanRer7,1093 chainNetFr3,936 chainNetFr3,1093 chainNetGalGal6,936 chainNetGalGal6,1093 chainNetGasAcu1,936 chainNetGasAcu1,1093 chainNetHg19,936 chainNetHg19,1093 chainNetMm10,936 chainNetMm10,1093 chainNetOryLat2,942 chainNetOryLat2,1099 chainOryLat2,939 chainOryLat2,1096 netDanRer7,933 netDanRer7,1090 netFr3,933 netFr3,1090 netGalGal6,933 netGalGal6,1090 netGasAcu1,933 netGasAcu1,1090 netHg19,933 netHg19,1090 netMm10,933 netMm10,1090 netOryLat2,939 netOryLat2,1096 harris chainDanRer7,1007 chainFr3,1007 chainGalGal6,1007 chainGasAcu1,1007 chainHg19,1007 chainMm10,1007 chainNetDanRer7,1010 chainNetFr3,1010 chainNetGalGal6,1010 chainNetGasAcu1,1010 chainNetHg19,1010 chainNetMm10,1010 chainNetOryLat2,1016 chainOryLat2,1013 netDanRer7,1007 netFr3,1007 netGalGal6,1007 netGasAcu1,1007 netHg19,1007 netMm10,1007 netOryLat2,1013 hart xenoRefGene,331 harvard gold,300 has gold,26 mrna,61 nestedRepeats,246 transMapV5,145 uniprot,33 uniprot,46 uniprot,154 uniprot,606 uniprot,1195 uniprot,1232 uniprot,1381 xenoMrna,135 xenoRefGene,66 haussler augustusGene,292 chainDanRer7,968 chainDanRer7,1048 chainDanRer7,1092 chainFr3,968 chainFr3,1048 chainFr3,1092 chainGalGal6,968 chainGalGal6,1048 chainGalGal6,1092 chainGasAcu1,968 chainGasAcu1,1048 chainGasAcu1,1092 chainHg19,968 chainHg19,1048 chainHg19,1092 chainMm10,968 chainMm10,1048 chainMm10,1092 chainNetDanRer7,971 chainNetDanRer7,1051 chainNetDanRer7,1095 chainNetFr3,971 chainNetFr3,1051 chainNetFr3,1095 chainNetGalGal6,971 chainNetGalGal6,1051 chainNetGalGal6,1095 chainNetGasAcu1,971 chainNetGasAcu1,1051 chainNetGasAcu1,1095 chainNetHg19,971 chainNetHg19,1051 chainNetHg19,1095 chainNetMm10,971 chainNetMm10,1051 chainNetMm10,1095 chainNetOryLat2,977 chainNetOryLat2,1057 chainNetOryLat2,1101 chainOryLat2,974 chainOryLat2,1054 chainOryLat2,1098 netDanRer7,968 netDanRer7,1048 netDanRer7,1092 netFr3,968 netFr3,1048 netFr3,1092 netGalGal6,968 netGalGal6,1048 netGalGal6,1092 netGasAcu1,968 netGasAcu1,1048 netGasAcu1,1092 netHg19,968 netHg19,1048 netHg19,1092 netMm10,968 netMm10,1048 netMm10,1092 netOryLat2,974 netOryLat2,1054 netOryLat2,1098 transMapEnsemblV5,760 transMapEnsemblV5,794 transMapEstV5,729 transMapEstV5,763 transMapRefSeqV5,729 transMapRefSeqV5,763 transMapRnaV5,729 transMapRnaV5,763 transMapV5,835 transMapV5,869 have chainDanRer7,567 chainFr3,567 chainGalGal6,567 chainGasAcu1,567 chainHg19,567 chainMm10,567 chainNetDanRer7,570 chainNetFr3,570 chainNetGalGal6,570 chainNetGasAcu1,570 chainNetHg19,570 chainNetMm10,570 chainNetOryLat2,576 chainOryLat2,573 nestedRepeats,88 netDanRer7,567 netFr3,567 netGalGal6,567 netGasAcu1,567 netHg19,567 netMm10,567 netOryLat2,573 tRNAs,181 tRNAs,214 uniprot,170 uniprot,302 uniprot,942 uniprot,1000 uniprot,1042 uniprot,1444 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 mrna,366 mrna,375 xenoMrna,439 xenoMrna,449 xenoRefGene,246 xenoRefGene,255 heavily uniprot,1533 helices uniprot,366 help cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 ensGene,126 gc5Base,61 helpful mrna,89 xenoMrna,163 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 hence xenoMrna,89 here mrna,342 transMapEnsemblV5,136 transMapEnsemblV5,150 transMapEnsemblV5,641 transMapEstV5,105 transMapEstV5,119 transMapEstV5,610 transMapRefSeqV5,105 transMapRefSeqV5,119 transMapRefSeqV5,610 transMapRnaV5,105 transMapRnaV5,119 transMapRnaV5,610 transMapV5,211 transMapV5,225 transMapV5,716 uniprot,1795 xenoMrna,84 xenoMrna,416 hg18 blastHg18KG,31 hg19 chainHg19,7 chainHg19,69 chainHg19,303 chainNetHg19,8 chainNetHg19,72 chainNetHg19,306 chainNetHg19Viewchain,6 chainNetHg19Viewnet,6 netHg19,7 netHg19,69 netHg19,303 uniprot,847 uniprot,860 hg38 uniprot,700 uniprot,843 uniprot,1177 uniprot,1367 uniprot,1909 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 transMapEnsemblV5,660 transMapEstV5,629 transMapRefSeqV5,629 transMapRnaV5,629 transMapV5,735 uniprot,1814 uniprot,1906 uniprot,1916 hiatt xenoRefGene,321 hidden augustusGene,324 uniprot,182 uniprot,223 hide uniprot,659 uniprot,667 xenoRefGene,190 hierarchy chainDanRer7,816 chainFr3,816 chainGalGal6,816 chainGasAcu1,816 chainHg19,816 chainMm10,816 chainNetDanRer7,819 chainNetFr3,819 chainNetGalGal6,819 chainNetGasAcu1,819 chainNetHg19,819 chainNetMm10,819 chainNetOryLat2,825 chainOryLat2,822 netDanRer7,816 netFr3,816 netGalGal6,816 netGasAcu1,816 netHg19,816 netMm10,816 netOryLat2,822 high gc5Base,29 transMapV5,118 higher chainDanRer7,848 chainFr3,848 chainGalGal6,848 chainGasAcu1,848 chainHg19,848 chainMm10,848 chainNetDanRer7,851 chainNetFr3,851 chainNetGalGal6,851 chainNetGasAcu1,851 chainNetHg19,851 chainNetMm10,851 chainNetOryLat2,857 chainOryLat2,854 cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 netDanRer7,848 netFr3,848 netGalGal6,848 netGasAcu1,848 netHg19,848 netMm10,848 netOryLat2,854 transMapV5,146 higher-level chainDanRer7,865 chainFr3,865 chainGalGal6,865 chainGasAcu1,865 chainHg19,865 chainMm10,865 chainNetDanRer7,868 chainNetFr3,868 chainNetGalGal6,868 chainNetGasAcu1,868 chainNetHg19,868 chainNetMm10,868 chainNetOryLat2,874 chainOryLat2,871 netDanRer7,865 netFr3,865 netGalGal6,865 netGasAcu1,865 netHg19,865 netMm10,865 netOryLat2,871 higher-scoring chainDanRer7,809 chainDanRer7,828 chainFr3,809 chainFr3,828 chainGalGal6,809 chainGalGal6,828 chainGasAcu1,809 chainGasAcu1,828 chainHg19,809 chainHg19,828 chainMm10,809 chainMm10,828 chainNetDanRer7,812 chainNetDanRer7,831 chainNetFr3,812 chainNetFr3,831 chainNetGalGal6,812 chainNetGalGal6,831 chainNetGasAcu1,812 chainNetGasAcu1,831 chainNetHg19,812 chainNetHg19,831 chainNetMm10,812 chainNetMm10,831 chainNetOryLat2,818 chainNetOryLat2,837 chainOryLat2,815 chainOryLat2,834 netDanRer7,809 netDanRer7,828 netFr3,809 netFr3,828 netGalGal6,809 netGalGal6,828 netGasAcu1,809 netGasAcu1,828 netHg19,809 netHg19,828 netMm10,809 netMm10,828 netOryLat2,815 netOryLat2,834 highest mrna,368 uniprot,948 uniprot,1113 xenoMrna,441 xenoRefGene,248 highest-scoring chainDanRer7,390 chainDanRer7,775 chainFr3,390 chainFr3,775 chainGalGal6,390 chainGalGal6,775 chainGasAcu1,390 chainGasAcu1,775 chainHg19,390 chainHg19,775 chainMm10,390 chainMm10,775 chainNetDanRer7,393 chainNetDanRer7,778 chainNetFr3,393 chainNetFr3,778 chainNetGalGal6,393 chainNetGalGal6,778 chainNetGasAcu1,393 chainNetGasAcu1,778 chainNetHg19,393 chainNetHg19,778 chainNetMm10,393 chainNetMm10,778 chainNetOryLat2,399 chainNetOryLat2,784 chainOryLat2,396 chainOryLat2,781 netDanRer7,390 netDanRer7,775 netFr3,390 netFr3,775 netGalGal6,390 netGalGal6,775 netGasAcu1,390 netGasAcu1,775 netHg19,390 netHg19,775 netMm10,390 netMm10,775 netOryLat2,396 netOryLat2,781 highlight gc5Base,49 mrna,269 xenoMrna,343 highlighted mrna,239 mrna,257 uniprot,580 xenoMrna,313 xenoMrna,331 highly microsat,40 tRNAs,69 hillier cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hinrichs chainDanRer7,1044 chainFr3,1044 chainGalGal6,1044 chainGasAcu1,1044 chainHg19,1044 chainMm10,1044 chainNetDanRer7,1047 chainNetFr3,1047 chainNetGalGal6,1047 chainNetGasAcu1,1047 chainNetHg19,1047 chainNetMm10,1047 chainNetOryLat2,1053 chainOryLat2,1050 netDanRer7,1044 netFr3,1044 netGalGal6,1044 netGasAcu1,1044 netHg19,1044 netMm10,1044 netOryLat2,1050 hiram gc5Base,82 his chainDanRer7,942 chainFr3,942 chainGalGal6,942 chainGasAcu1,942 chainHg19,942 chainMm10,942 chainNetDanRer7,945 chainNetFr3,945 chainNetGalGal6,945 chainNetGasAcu1,945 chainNetHg19,945 chainNetMm10,945 chainNetOryLat2,951 chainOryLat2,948 netDanRer7,942 netFr3,942 netGalGal6,942 netGasAcu1,942 netHg19,942 netMm10,942 netOryLat2,948 honeybee1 augustusGene,217 horizontal nestedRepeats,130 nestedRepeats,150 hou chainDanRer7,921 chainFr3,921 chainGalGal6,921 chainGasAcu1,921 chainHg19,921 chainMm10,921 chainNetDanRer7,924 chainNetFr3,924 chainNetGalGal6,924 chainNetGasAcu1,924 chainNetHg19,924 chainNetMm10,924 chainNetOryLat2,930 chainOryLat2,927 netDanRer7,921 netFr3,921 netGalGal6,921 netGasAcu1,921 netHg19,921 netMm10,921 netOryLat2,927 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how chainDanRer7,876 chainDanRer7,893 chainFr3,876 chainFr3,893 chainGalGal6,876 chainGalGal6,893 chainGasAcu1,876 chainGasAcu1,893 chainHg19,876 chainHg19,893 chainMm10,876 chainMm10,893 chainNetDanRer7,879 chainNetDanRer7,896 chainNetFr3,879 chainNetFr3,896 chainNetGalGal6,879 chainNetGalGal6,896 chainNetGasAcu1,879 chainNetGasAcu1,896 chainNetHg19,879 chainNetHg19,896 chainNetMm10,879 chainNetMm10,896 chainNetOryLat2,885 chainNetOryLat2,902 chainOryLat2,882 chainOryLat2,899 netDanRer7,876 netDanRer7,893 netFr3,876 netFr3,893 netGalGal6,876 netGalGal6,893 netGasAcu1,876 netGasAcu1,893 netHg19,876 netHg19,893 netMm10,876 netMm10,893 netOryLat2,882 netOryLat2,899 howe gaze,26 gaze,73 however cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 transMapEnsemblV5,485 transMapEstV5,454 transMapRefSeqV5,454 transMapRnaV5,454 transMapV5,560 http cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 transMapEnsemblV5,659 transMapEstV5,628 transMapRefSeqV5,628 transMapRnaV5,628 transMapV5,734 uniprot,1813 https uniprot,1905 uniprot,1915 hub uniprot,711 uniprot,1672 uniprot,1679 hubbard ensGene,44 ensGene,168 hubley nestedRepeats,308 nestedRepeats,326 hum uniprot,2043 human augustusGene,205 augustusGene,210 augustusGene,276 blastHg18KG,1 blastHg18KG,3 blastHg18KG,42 blastHg18KG,50 chainDanRer7,1061 chainFr3,1061 chainGalGal6,1061 chainGasAcu1,1061 chainHg19,1 chainHg19,3 chainHg19,65 chainHg19,96 chainHg19,148 chainHg19,266 chainHg19,291 chainHg19,572 chainHg19,620 chainHg19,1061 chainMm10,1061 chainNetDanRer7,1064 chainNetFr3,1064 chainNetGalGal6,1064 chainNetGasAcu1,1064 chainNetHg19,1 chainNetHg19,4 chainNetHg19,68 chainNetHg19,99 chainNetHg19,151 chainNetHg19,269 chainNetHg19,294 chainNetHg19,575 chainNetHg19,623 chainNetHg19,1064 chainNetHg19Viewchain,2 chainNetHg19Viewnet,2 chainNetMm10,1064 chainNetOryLat2,1070 chainOryLat2,1067 gaze,46 gaze,51 genscan,217 nestedRepeats,404 netDanRer7,1061 netFr3,1061 netGalGal6,1061 netGasAcu1,1061 netHg19,1 netHg19,3 netHg19,65 netHg19,96 netHg19,148 netHg19,266 netHg19,291 netHg19,572 netHg19,620 netHg19,1061 netMm10,1061 netOryLat2,1067 transMapEnsemblV5,42 transMapEnsemblV5,362 transMapEnsemblV5,471 transMapEnsemblV5,738 transMapEnsemblV5,806 transMapEstV5,331 transMapEstV5,440 transMapEstV5,707 transMapEstV5,775 transMapRefSeqV5,331 transMapRefSeqV5,440 transMapRefSeqV5,707 transMapRefSeqV5,775 transMapRnaV5,331 transMapRnaV5,440 transMapRnaV5,707 transMapRnaV5,775 transMapV5,104 transMapV5,133 transMapV5,437 transMapV5,546 transMapV5,813 transMapV5,881 uniprot,699 uniprot,940 uniprot,2040 human-mouse chainDanRer7,1096 chainFr3,1096 chainGalGal6,1096 chainGasAcu1,1096 chainHg19,1096 chainMm10,1096 chainNetDanRer7,1099 chainNetFr3,1099 chainNetGalGal6,1099 chainNetGasAcu1,1099 chainNetHg19,1099 chainNetMm10,1099 chainNetOryLat2,1105 chainOryLat2,1102 netDanRer7,1096 netFr3,1096 netGalGal6,1096 netGasAcu1,1096 netHg19,1096 netMm10,1096 netOryLat2,1102 i mrna,424 xenoMrna,493 i.e tRNAs,148 id nestedRepeats,10 nestedRepeats,106 uniprot,1026 uniprot,1051 uniprot,1060 uniprot,1282 identical uniprot,1106 uniprot,1144 uniprot,1147 identification tRNAs,480 identified blastHg18KG,28 chainDanRer7,937 chainFr3,937 chainGalGal6,937 chainGasAcu1,937 chainHg19,937 chainMm10,937 chainNetDanRer7,940 chainNetFr3,940 chainNetGalGal6,940 chainNetGasAcu1,940 chainNetHg19,940 chainNetMm10,940 chainNetOryLat2,946 chainOryLat2,943 netDanRer7,937 netFr3,937 netGalGal6,937 netGasAcu1,937 netHg19,937 netMm10,937 netOryLat2,943 tRNAs,6 transMapEnsemblV5,512 transMapEstV5,481 transMapRefSeqV5,481 transMapRnaV5,481 transMapV5,587 xenoRefGene,252 identifier transMapEnsemblV5,483 transMapEstV5,452 transMapRefSeqV5,452 transMapRnaV5,452 transMapV5,558 identifiers transMapEnsemblV5,384 transMapEnsemblV5,443 transMapEnsemblV5,461 transMapEstV5,353 transMapEstV5,412 transMapEstV5,430 transMapRefSeqV5,353 transMapRefSeqV5,412 transMapRefSeqV5,430 transMapRnaV5,353 transMapRnaV5,412 transMapRnaV5,430 transMapV5,459 transMapV5,518 transMapV5,536 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 tRNAs,421 identity microsat,71 mrna,370 mrna,378 mrna,390 nestedRepeats,187 nestedRepeats,222 xenoMrna,443 xenoMrna,452 xenoMrna,464 xenoRefGene,250 xenoRefGene,258 xenoRefGene,270 ideogram cytoBandIdeo,3 cytoBandIdeo,4 ids uniprot,1292 if gap,24 gold,107 mrna,212 mrna,224 mrna,240 mrna,276 mrna,293 nestedRepeats,137 transMapEnsemblV5,244 transMapEstV5,213 transMapRefSeqV5,213 transMapRnaV5,213 transMapV5,319 uniprot,602 uniprot,688 uniprot,1030 uniprot,1077 uniprot,1230 uniprot,1261 uniprot,1323 uniprot,1442 xenoMrna,286 xenoMrna,298 xenoMrna,314 xenoMrna,350 xenoMrna,367 xenoRefGene,203 ignored uniprot,1426 ii215-25 augustusGene,338 images tRNAs,319 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 important uniprot,900 improve augustusGene,302 transMapEnsemblV5,770 transMapEstV5,739 transMapRefSeqV5,739 transMapRnaV5,739 transMapV5,845 improved chainDanRer7,1010 chainFr3,1010 chainGalGal6,1010 chainGasAcu1,1010 chainHg19,1010 chainMm10,1010 chainNetDanRer7,1013 chainNetFr3,1013 chainNetGalGal6,1013 chainNetGasAcu1,1013 chainNetHg19,1013 chainNetMm10,1013 chainNetOryLat2,1019 chainOryLat2,1016 netDanRer7,1010 netFr3,1010 netGalGal6,1010 netGasAcu1,1010 netHg19,1010 netMm10,1010 netOryLat2,1016 tRNAs,448 in augustusGene,101 blastHg18KG,29 chainDanRer7,31 chainDanRer7,94 chainDanRer7,114 chainDanRer7,146 chainDanRer7,153 chainDanRer7,167 chainDanRer7,186 chainDanRer7,189 chainDanRer7,228 chainDanRer7,249 chainDanRer7,294 chainDanRer7,327 chainDanRer7,357 chainDanRer7,369 chainDanRer7,378 chainDanRer7,396 chainDanRer7,401 chainDanRer7,410 chainDanRer7,422 chainDanRer7,436 chainDanRer7,478 chainDanRer7,495 chainDanRer7,526 chainDanRer7,544 chainDanRer7,558 chainDanRer7,593 chainDanRer7,689 chainDanRer7,777 chainDanRer7,818 chainDanRer7,826 chainDanRer7,842 chainDanRer7,875 chainDanRer7,887 chainDanRer7,1057 chainFr3,31 chainFr3,94 chainFr3,114 chainFr3,146 chainFr3,153 chainFr3,167 chainFr3,186 chainFr3,189 chainFr3,228 chainFr3,249 chainFr3,294 chainFr3,327 chainFr3,357 chainFr3,369 chainFr3,378 chainFr3,396 chainFr3,401 chainFr3,410 chainFr3,422 chainFr3,436 chainFr3,478 chainFr3,495 chainFr3,526 chainFr3,544 chainFr3,558 chainFr3,593 chainFr3,689 chainFr3,777 chainFr3,818 chainFr3,826 chainFr3,842 chainFr3,875 chainFr3,887 chainFr3,1057 chainGalGal6,31 chainGalGal6,94 chainGalGal6,114 chainGalGal6,146 chainGalGal6,153 chainGalGal6,167 chainGalGal6,186 chainGalGal6,189 chainGalGal6,228 chainGalGal6,249 chainGalGal6,294 chainGalGal6,327 chainGalGal6,357 chainGalGal6,369 chainGalGal6,378 chainGalGal6,396 chainGalGal6,401 chainGalGal6,410 chainGalGal6,422 chainGalGal6,436 chainGalGal6,478 chainGalGal6,495 chainGalGal6,526 chainGalGal6,544 chainGalGal6,558 chainGalGal6,593 chainGalGal6,689 chainGalGal6,777 chainGalGal6,818 chainGalGal6,826 chainGalGal6,842 chainGalGal6,875 chainGalGal6,887 chainGalGal6,1057 chainGasAcu1,31 chainGasAcu1,94 chainGasAcu1,114 chainGasAcu1,146 chainGasAcu1,153 chainGasAcu1,167 chainGasAcu1,186 chainGasAcu1,189 chainGasAcu1,228 chainGasAcu1,249 chainGasAcu1,294 chainGasAcu1,327 chainGasAcu1,357 chainGasAcu1,369 chainGasAcu1,378 chainGasAcu1,396 chainGasAcu1,401 chainGasAcu1,410 chainGasAcu1,422 chainGasAcu1,436 chainGasAcu1,478 chainGasAcu1,495 chainGasAcu1,526 chainGasAcu1,544 chainGasAcu1,558 chainGasAcu1,593 chainGasAcu1,689 chainGasAcu1,777 chainGasAcu1,818 chainGasAcu1,826 chainGasAcu1,842 chainGasAcu1,875 chainGasAcu1,887 chainGasAcu1,1057 chainHg19,31 chainHg19,94 chainHg19,114 chainHg19,146 chainHg19,153 chainHg19,167 chainHg19,186 chainHg19,189 chainHg19,228 chainHg19,249 chainHg19,294 chainHg19,327 chainHg19,357 chainHg19,369 chainHg19,378 chainHg19,396 chainHg19,401 chainHg19,410 chainHg19,422 chainHg19,436 chainHg19,478 chainHg19,495 chainHg19,526 chainHg19,544 chainHg19,558 chainHg19,593 chainHg19,689 chainHg19,777 chainHg19,818 chainHg19,826 chainHg19,842 chainHg19,875 chainHg19,887 chainHg19,1057 chainMm10,31 chainMm10,94 chainMm10,114 chainMm10,146 chainMm10,153 chainMm10,167 chainMm10,186 chainMm10,189 chainMm10,228 chainMm10,249 chainMm10,294 chainMm10,327 chainMm10,357 chainMm10,369 chainMm10,378 chainMm10,396 chainMm10,401 chainMm10,410 chainMm10,422 chainMm10,436 chainMm10,478 chainMm10,495 chainMm10,526 chainMm10,544 chainMm10,558 chainMm10,593 chainMm10,689 chainMm10,777 chainMm10,818 chainMm10,826 chainMm10,842 chainMm10,875 chainMm10,887 chainMm10,1057 chainNetDanRer7,34 chainNetDanRer7,97 chainNetDanRer7,117 chainNetDanRer7,149 chainNetDanRer7,156 chainNetDanRer7,170 chainNetDanRer7,189 chainNetDanRer7,192 chainNetDanRer7,231 chainNetDanRer7,252 chainNetDanRer7,297 chainNetDanRer7,330 chainNetDanRer7,360 chainNetDanRer7,372 chainNetDanRer7,381 chainNetDanRer7,399 chainNetDanRer7,404 chainNetDanRer7,413 chainNetDanRer7,425 chainNetDanRer7,439 chainNetDanRer7,481 chainNetDanRer7,498 chainNetDanRer7,529 chainNetDanRer7,547 chainNetDanRer7,561 chainNetDanRer7,596 chainNetDanRer7,692 chainNetDanRer7,780 chainNetDanRer7,821 chainNetDanRer7,829 chainNetDanRer7,845 chainNetDanRer7,878 chainNetDanRer7,890 chainNetDanRer7,1060 chainNetFr3,34 chainNetFr3,97 chainNetFr3,117 chainNetFr3,149 chainNetFr3,156 chainNetFr3,170 chainNetFr3,189 chainNetFr3,192 chainNetFr3,231 chainNetFr3,252 chainNetFr3,297 chainNetFr3,330 chainNetFr3,360 chainNetFr3,372 chainNetFr3,381 chainNetFr3,399 chainNetFr3,404 chainNetFr3,413 chainNetFr3,425 chainNetFr3,439 chainNetFr3,481 chainNetFr3,498 chainNetFr3,529 chainNetFr3,547 chainNetFr3,561 chainNetFr3,596 chainNetFr3,692 chainNetFr3,780 chainNetFr3,821 chainNetFr3,829 chainNetFr3,845 chainNetFr3,878 chainNetFr3,890 chainNetFr3,1060 chainNetGalGal6,34 chainNetGalGal6,97 chainNetGalGal6,117 chainNetGalGal6,149 chainNetGalGal6,156 chainNetGalGal6,170 chainNetGalGal6,189 chainNetGalGal6,192 chainNetGalGal6,231 chainNetGalGal6,252 chainNetGalGal6,297 chainNetGalGal6,330 chainNetGalGal6,360 chainNetGalGal6,372 chainNetGalGal6,381 chainNetGalGal6,399 chainNetGalGal6,404 chainNetGalGal6,413 chainNetGalGal6,425 chainNetGalGal6,439 chainNetGalGal6,481 chainNetGalGal6,498 chainNetGalGal6,529 chainNetGalGal6,547 chainNetGalGal6,561 chainNetGalGal6,596 chainNetGalGal6,692 chainNetGalGal6,780 chainNetGalGal6,821 chainNetGalGal6,829 chainNetGalGal6,845 chainNetGalGal6,878 chainNetGalGal6,890 chainNetGalGal6,1060 chainNetGasAcu1,34 chainNetGasAcu1,97 chainNetGasAcu1,117 chainNetGasAcu1,149 chainNetGasAcu1,156 chainNetGasAcu1,170 chainNetGasAcu1,189 chainNetGasAcu1,192 chainNetGasAcu1,231 chainNetGasAcu1,252 chainNetGasAcu1,297 chainNetGasAcu1,330 chainNetGasAcu1,360 chainNetGasAcu1,372 chainNetGasAcu1,381 chainNetGasAcu1,399 chainNetGasAcu1,404 chainNetGasAcu1,413 chainNetGasAcu1,425 chainNetGasAcu1,439 chainNetGasAcu1,481 chainNetGasAcu1,498 chainNetGasAcu1,529 chainNetGasAcu1,547 chainNetGasAcu1,561 chainNetGasAcu1,596 chainNetGasAcu1,692 chainNetGasAcu1,780 chainNetGasAcu1,821 chainNetGasAcu1,829 chainNetGasAcu1,845 chainNetGasAcu1,878 chainNetGasAcu1,890 chainNetGasAcu1,1060 chainNetHg19,34 chainNetHg19,97 chainNetHg19,117 chainNetHg19,149 chainNetHg19,156 chainNetHg19,170 chainNetHg19,189 chainNetHg19,192 chainNetHg19,231 chainNetHg19,252 chainNetHg19,297 chainNetHg19,330 chainNetHg19,360 chainNetHg19,372 chainNetHg19,381 chainNetHg19,399 chainNetHg19,404 chainNetHg19,413 chainNetHg19,425 chainNetHg19,439 chainNetHg19,481 chainNetHg19,498 chainNetHg19,529 chainNetHg19,547 chainNetHg19,561 chainNetHg19,596 chainNetHg19,692 chainNetHg19,780 chainNetHg19,821 chainNetHg19,829 chainNetHg19,845 chainNetHg19,878 chainNetHg19,890 chainNetHg19,1060 chainNetMm10,34 chainNetMm10,97 chainNetMm10,117 chainNetMm10,149 chainNetMm10,156 chainNetMm10,170 chainNetMm10,189 chainNetMm10,192 chainNetMm10,231 chainNetMm10,252 chainNetMm10,297 chainNetMm10,330 chainNetMm10,360 chainNetMm10,372 chainNetMm10,381 chainNetMm10,399 chainNetMm10,404 chainNetMm10,413 chainNetMm10,425 chainNetMm10,439 chainNetMm10,481 chainNetMm10,498 chainNetMm10,529 chainNetMm10,547 chainNetMm10,561 chainNetMm10,596 chainNetMm10,692 chainNetMm10,780 chainNetMm10,821 chainNetMm10,829 chainNetMm10,845 chainNetMm10,878 chainNetMm10,890 chainNetMm10,1060 chainNetOryLat2,36 chainNetOryLat2,101 chainNetOryLat2,121 chainNetOryLat2,153 chainNetOryLat2,160 chainNetOryLat2,174 chainNetOryLat2,193 chainNetOryLat2,196 chainNetOryLat2,235 chainNetOryLat2,256 chainNetOryLat2,301 chainNetOryLat2,336 chainNetOryLat2,366 chainNetOryLat2,378 chainNetOryLat2,387 chainNetOryLat2,405 chainNetOryLat2,410 chainNetOryLat2,419 chainNetOryLat2,431 chainNetOryLat2,445 chainNetOryLat2,487 chainNetOryLat2,504 chainNetOryLat2,535 chainNetOryLat2,553 chainNetOryLat2,567 chainNetOryLat2,602 chainNetOryLat2,698 chainNetOryLat2,786 chainNetOryLat2,827 chainNetOryLat2,835 chainNetOryLat2,851 chainNetOryLat2,884 chainNetOryLat2,896 chainNetOryLat2,1066 chainOryLat2,33 chainOryLat2,98 chainOryLat2,118 chainOryLat2,150 chainOryLat2,157 chainOryLat2,171 chainOryLat2,190 chainOryLat2,193 chainOryLat2,232 chainOryLat2,253 chainOryLat2,298 chainOryLat2,333 chainOryLat2,363 chainOryLat2,375 chainOryLat2,384 chainOryLat2,402 chainOryLat2,407 chainOryLat2,416 chainOryLat2,428 chainOryLat2,442 chainOryLat2,484 chainOryLat2,501 chainOryLat2,532 chainOryLat2,550 chainOryLat2,564 chainOryLat2,599 chainOryLat2,695 chainOryLat2,783 chainOryLat2,824 chainOryLat2,832 chainOryLat2,848 chainOryLat2,881 chainOryLat2,893 chainOryLat2,1063 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 ensGene,37 ensGene,50 ensGene,83 ensGene,90 ensGene,95 gap,12 gap,21 gap,83 gap,122 gap,144 gap,152 gap,174 gap,182 gap,188 gc5Base,5 gc5Base,26 gc5Base,43 genscan,101 genscan,150 genscan,162 genscan,165 genscan,184 genscan,188 genscan,198 genscan,216 gold,58 gold,95 gold,143 gold,188 gold,261 microsat,42 microsat,49 mrna,20 mrna,39 mrna,95 mrna,116 mrna,139 mrna,149 mrna,167 mrna,209 mrna,361 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 netDanRer7,31 netDanRer7,94 netDanRer7,114 netDanRer7,146 netDanRer7,153 netDanRer7,167 netDanRer7,186 netDanRer7,189 netDanRer7,228 netDanRer7,249 netDanRer7,294 netDanRer7,327 netDanRer7,357 netDanRer7,369 netDanRer7,378 netDanRer7,396 netDanRer7,401 netDanRer7,410 netDanRer7,422 netDanRer7,436 netDanRer7,478 netDanRer7,495 netDanRer7,526 netDanRer7,544 netDanRer7,558 netDanRer7,593 netDanRer7,689 netDanRer7,777 netDanRer7,818 netDanRer7,826 netDanRer7,842 netDanRer7,875 netDanRer7,887 netDanRer7,1057 netFr3,31 netFr3,94 netFr3,114 netFr3,146 netFr3,153 netFr3,167 netFr3,186 netFr3,189 netFr3,228 netFr3,249 netFr3,294 netFr3,327 netFr3,357 netFr3,369 netFr3,378 netFr3,396 netFr3,401 netFr3,410 netFr3,422 netFr3,436 netFr3,478 netFr3,495 netFr3,526 netFr3,544 netFr3,558 netFr3,593 netFr3,689 netFr3,777 netFr3,818 netFr3,826 netFr3,842 netFr3,875 netFr3,887 netFr3,1057 netGalGal6,31 netGalGal6,94 netGalGal6,114 netGalGal6,146 netGalGal6,153 netGalGal6,167 netGalGal6,186 netGalGal6,189 netGalGal6,228 netGalGal6,249 netGalGal6,294 netGalGal6,327 netGalGal6,357 netGalGal6,369 netGalGal6,378 netGalGal6,396 netGalGal6,401 netGalGal6,410 netGalGal6,422 netGalGal6,436 netGalGal6,478 netGalGal6,495 netGalGal6,526 netGalGal6,544 netGalGal6,558 netGalGal6,593 netGalGal6,689 netGalGal6,777 netGalGal6,818 netGalGal6,826 netGalGal6,842 netGalGal6,875 netGalGal6,887 netGalGal6,1057 netGasAcu1,31 netGasAcu1,94 netGasAcu1,114 netGasAcu1,146 netGasAcu1,153 netGasAcu1,167 netGasAcu1,186 netGasAcu1,189 netGasAcu1,228 netGasAcu1,249 netGasAcu1,294 netGasAcu1,327 netGasAcu1,357 netGasAcu1,369 netGasAcu1,378 netGasAcu1,396 netGasAcu1,401 netGasAcu1,410 netGasAcu1,422 netGasAcu1,436 netGasAcu1,478 netGasAcu1,495 netGasAcu1,526 netGasAcu1,544 netGasAcu1,558 netGasAcu1,593 netGasAcu1,689 netGasAcu1,777 netGasAcu1,818 netGasAcu1,826 netGasAcu1,842 netGasAcu1,875 netGasAcu1,887 netGasAcu1,1057 netHg19,31 netHg19,94 netHg19,114 netHg19,146 netHg19,153 netHg19,167 netHg19,186 netHg19,189 netHg19,228 netHg19,249 netHg19,294 netHg19,327 netHg19,357 netHg19,369 netHg19,378 netHg19,396 netHg19,401 netHg19,410 netHg19,422 netHg19,436 netHg19,478 netHg19,495 netHg19,526 netHg19,544 netHg19,558 netHg19,593 netHg19,689 netHg19,777 netHg19,818 netHg19,826 netHg19,842 netHg19,875 netHg19,887 netHg19,1057 netMm10,31 netMm10,94 netMm10,114 netMm10,146 netMm10,153 netMm10,167 netMm10,186 netMm10,189 netMm10,228 netMm10,249 netMm10,294 netMm10,327 netMm10,357 netMm10,369 netMm10,378 netMm10,396 netMm10,401 netMm10,410 netMm10,422 netMm10,436 netMm10,478 netMm10,495 netMm10,526 netMm10,544 netMm10,558 netMm10,593 netMm10,689 netMm10,777 netMm10,818 netMm10,826 netMm10,842 netMm10,875 netMm10,887 netMm10,1057 netOryLat2,33 netOryLat2,98 netOryLat2,118 netOryLat2,150 netOryLat2,157 netOryLat2,171 netOryLat2,190 netOryLat2,193 netOryLat2,232 netOryLat2,253 netOryLat2,298 netOryLat2,333 netOryLat2,363 netOryLat2,375 netOryLat2,384 netOryLat2,402 netOryLat2,407 netOryLat2,416 netOryLat2,428 netOryLat2,442 netOryLat2,484 netOryLat2,501 netOryLat2,532 netOryLat2,550 netOryLat2,564 netOryLat2,599 netOryLat2,695 netOryLat2,783 netOryLat2,824 netOryLat2,832 netOryLat2,848 netOryLat2,881 netOryLat2,893 netOryLat2,1063 tRNAs,155 tRNAs,158 tRNAs,194 tRNAs,203 tRNAs,222 tRNAs,240 tRNAs,249 tRNAs,378 tRNAs,425 tRNAs,454 tRNAs,486 transMapEnsemblV5,33 transMapEnsemblV5,82 transMapEnsemblV5,89 transMapEnsemblV5,160 transMapEnsemblV5,335 transMapEnsemblV5,359 transMapEnsemblV5,367 transMapEnsemblV5,402 transMapEnsemblV5,412 transMapEnsemblV5,446 transMapEnsemblV5,492 transMapEnsemblV5,542 transMapEnsemblV5,584 transMapEstV5,31 transMapEstV5,51 transMapEstV5,58 transMapEstV5,129 transMapEstV5,304 transMapEstV5,328 transMapEstV5,336 transMapEstV5,371 transMapEstV5,381 transMapEstV5,415 transMapEstV5,461 transMapEstV5,511 transMapEstV5,553 transMapRefSeqV5,31 transMapRefSeqV5,51 transMapRefSeqV5,58 transMapRefSeqV5,129 transMapRefSeqV5,304 transMapRefSeqV5,328 transMapRefSeqV5,336 transMapRefSeqV5,371 transMapRefSeqV5,381 transMapRefSeqV5,415 transMapRefSeqV5,461 transMapRefSeqV5,511 transMapRefSeqV5,553 transMapRnaV5,31 transMapRnaV5,51 transMapRnaV5,58 transMapRnaV5,129 transMapRnaV5,304 transMapRnaV5,328 transMapRnaV5,336 transMapRnaV5,371 transMapRnaV5,381 transMapRnaV5,415 transMapRnaV5,461 transMapRnaV5,511 transMapRnaV5,553 transMapV5,30 transMapV5,52 transMapV5,59 transMapV5,76 transMapV5,235 transMapV5,410 transMapV5,434 transMapV5,442 transMapV5,477 transMapV5,487 transMapV5,521 transMapV5,567 transMapV5,617 transMapV5,659 uniprot,67 uniprot,148 uniprot,161 uniprot,177 uniprot,242 uniprot,291 uniprot,313 uniprot,427 uniprot,505 uniprot,509 uniprot,570 uniprot,581 uniprot,586 uniprot,591 uniprot,737 uniprot,755 uniprot,854 uniprot,870 uniprot,882 uniprot,1066 uniprot,1132 uniprot,1151 uniprot,1171 uniprot,1190 uniprot,1199 uniprot,1252 uniprot,1258 uniprot,1272 uniprot,1466 uniprot,1637 uniprot,1663 uniprot,1734 uniprot,1752 uniprot,1849 uniprot,1864 windowmaskerSdust,27 xenoMrna,22 xenoMrna,43 xenoMrna,66 xenoMrna,169 xenoMrna,190 xenoMrna,213 xenoMrna,223 xenoMrna,241 xenoMrna,283 xenoMrna,434 xenoRefGene,241 include mrna,77 mrna,271 mrna,295 xenoMrna,151 xenoMrna,345 xenoMrna,369 included augustusGene,160 blastHg18KG,113 blastHg18KG,136 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 gap,160 windowmaskerSdust,26 includes uniprot,1587 including uniprot,1700 incorrect uniprot,1361 indels microsat,74 indicate chainDanRer7,137 chainDanRer7,243 chainFr3,137 chainFr3,243 chainGalGal6,137 chainGalGal6,243 chainGasAcu1,137 chainGasAcu1,243 chainHg19,137 chainHg19,243 chainMm10,137 chainMm10,243 chainNetDanRer7,140 chainNetDanRer7,246 chainNetFr3,140 chainNetFr3,246 chainNetGalGal6,140 chainNetGalGal6,246 chainNetGasAcu1,140 chainNetGasAcu1,246 chainNetHg19,140 chainNetHg19,246 chainNetMm10,140 chainNetMm10,246 chainNetOryLat2,144 chainNetOryLat2,250 chainOryLat2,141 chainOryLat2,247 mrna,50 nestedRepeats,153 netDanRer7,137 netDanRer7,243 netFr3,137 netFr3,243 netGalGal6,137 netGalGal6,243 netGasAcu1,137 netGasAcu1,243 netHg19,137 netHg19,243 netMm10,137 netMm10,243 netOryLat2,141 netOryLat2,247 tRNAs,137 tRNAs,187 xenoMrna,54 indicates xenoMrna,71 xenoMrna,93 xenoRefGene,58 individual chainDanRer7,240 chainDanRer7,493 chainFr3,240 chainFr3,493 chainGalGal6,240 chainGalGal6,493 chainGasAcu1,240 chainGasAcu1,493 chainHg19,240 chainHg19,493 chainMm10,240 chainMm10,493 chainNetDanRer7,243 chainNetDanRer7,496 chainNetFr3,243 chainNetFr3,496 chainNetGalGal6,243 chainNetGalGal6,496 chainNetGasAcu1,243 chainNetGasAcu1,496 chainNetHg19,243 chainNetHg19,496 chainNetMm10,243 chainNetMm10,496 chainNetOryLat2,247 chainNetOryLat2,502 chainOryLat2,244 chainOryLat2,499 netDanRer7,240 netDanRer7,493 netFr3,240 netFr3,493 netGalGal6,240 netGalGal6,493 netGasAcu1,240 netGasAcu1,493 netHg19,240 netHg19,493 netMm10,240 netMm10,493 netOryLat2,244 netOryLat2,499 transMapEnsemblV5,600 transMapEstV5,569 transMapRefSeqV5,569 transMapRnaV5,569 transMapV5,675 information augustusGene,36 blastHg18KG,149 chainDanRer7,456 chainDanRer7,469 chainDanRer7,475 chainDanRer7,843 chainFr3,456 chainFr3,469 chainFr3,475 chainFr3,843 chainGalGal6,456 chainGalGal6,469 chainGalGal6,475 chainGalGal6,843 chainGasAcu1,456 chainGasAcu1,469 chainGasAcu1,475 chainGasAcu1,843 chainHg19,456 chainHg19,469 chainHg19,475 chainHg19,843 chainMm10,456 chainMm10,469 chainMm10,475 chainMm10,843 chainNetDanRer7,459 chainNetDanRer7,472 chainNetDanRer7,478 chainNetDanRer7,846 chainNetFr3,459 chainNetFr3,472 chainNetFr3,478 chainNetFr3,846 chainNetGalGal6,459 chainNetGalGal6,472 chainNetGalGal6,478 chainNetGalGal6,846 chainNetGasAcu1,459 chainNetGasAcu1,472 chainNetGasAcu1,478 chainNetGasAcu1,846 chainNetHg19,459 chainNetHg19,472 chainNetHg19,478 chainNetHg19,846 chainNetMm10,459 chainNetMm10,472 chainNetMm10,478 chainNetMm10,846 chainNetOryLat2,465 chainNetOryLat2,478 chainNetOryLat2,484 chainNetOryLat2,852 chainOryLat2,462 chainOryLat2,475 chainOryLat2,481 chainOryLat2,849 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 ensGene,19 ensGene,159 gaze,41 gc5Base,55 genscan,51 genscan,126 microsat,97 mrna,337 nestedRepeats,53 nestedRepeats,301 netDanRer7,456 netDanRer7,469 netDanRer7,475 netDanRer7,843 netFr3,456 netFr3,469 netFr3,475 netFr3,843 netGalGal6,456 netGalGal6,469 netGalGal6,475 netGalGal6,843 netGasAcu1,456 netGasAcu1,469 netGasAcu1,475 netGasAcu1,843 netHg19,456 netHg19,469 netHg19,475 netHg19,843 netMm10,456 netMm10,469 netMm10,475 netMm10,843 netOryLat2,462 netOryLat2,475 netOryLat2,481 netOryLat2,849 simpleRepeat,58 transMapEnsemblV5,131 transMapEnsemblV5,148 transMapEnsemblV5,566 transMapEstV5,100 transMapEstV5,117 transMapEstV5,535 transMapRefSeqV5,100 transMapRefSeqV5,117 transMapRefSeqV5,535 transMapRnaV5,100 transMapRnaV5,117 transMapRnaV5,535 transMapV5,206 transMapV5,223 transMapV5,641 uniprot,678 uniprot,1842 uniprot,2038 xenoMrna,61 xenoMrna,411 xenoRefGene,175 initial tRNAs,47 initio augustusGene,4 augustusGene,17 input uniprot,1952 windowmaskerSdust,61 windowmaskerSdust,70 inserted chainDanRer7,569 chainDanRer7,899 chainFr3,569 chainFr3,899 chainGalGal6,569 chainGalGal6,899 chainGasAcu1,569 chainGasAcu1,899 chainHg19,569 chainHg19,899 chainMm10,569 chainMm10,899 chainNetDanRer7,572 chainNetDanRer7,902 chainNetFr3,572 chainNetFr3,902 chainNetGalGal6,572 chainNetGalGal6,902 chainNetGasAcu1,572 chainNetGasAcu1,902 chainNetHg19,572 chainNetHg19,902 chainNetMm10,572 chainNetMm10,902 chainNetOryLat2,578 chainNetOryLat2,908 chainOryLat2,575 chainOryLat2,905 netDanRer7,569 netDanRer7,899 netFr3,569 netFr3,899 netGalGal6,569 netGalGal6,899 netGasAcu1,569 netGasAcu1,899 netHg19,569 netHg19,899 netMm10,569 netMm10,899 netOryLat2,575 netOryLat2,905 insertion chainDanRer7,152 chainFr3,152 chainGalGal6,152 chainGasAcu1,152 chainHg19,152 chainMm10,152 chainNetDanRer7,155 chainNetFr3,155 chainNetGalGal6,155 chainNetGasAcu1,155 chainNetHg19,155 chainNetMm10,155 chainNetOryLat2,159 chainOryLat2,156 netDanRer7,152 netFr3,152 netGalGal6,152 netGasAcu1,152 netHg19,152 netMm10,152 netOryLat2,156 insertions nestedRepeats,86 nestedRepeats,92 inside uniprot,560 inspected tRNAs,228 inspection uniprot,1653 instead xenoRefGene,118 institute gold,296 nestedRepeats,55 instructions ensGene,117 transMapEnsemblV5,631 transMapEstV5,600 transMapRefSeqV5,600 transMapRnaV5,600 transMapV5,706 uniprot,1785 integrated tRNAs,27 integrates gaze,40 integration gaze,85 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 ensGene,71 transMapEnsemblV5,534 transMapEstV5,503 transMapRefSeqV5,503 transMapRnaV5,503 transMapV5,609 uniprot,1725 interactions uniprot,316 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 ensGene,63 transMapEnsemblV5,526 transMapEstV5,495 transMapRefSeqV5,495 transMapRnaV5,495 transMapV5,601 uniprot,1717 interest unipInterest,1 unipInterest,5 uniprot,299 intergenic genscan,47 international mrna,413 transMapEnsemblV5,692 transMapEstV5,661 transMapRefSeqV5,661 transMapRnaV5,661 transMapV5,767 xenoMrna,482 internet nestedRepeats,279 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 intervals windowmaskerSdust,4 into chainDanRer7,599 chainDanRer7,611 chainDanRer7,627 chainDanRer7,802 chainFr3,599 chainFr3,611 chainFr3,627 chainFr3,802 chainGalGal6,599 chainGalGal6,611 chainGalGal6,627 chainGalGal6,802 chainGasAcu1,599 chainGasAcu1,611 chainGasAcu1,627 chainGasAcu1,802 chainHg19,599 chainHg19,611 chainHg19,627 chainHg19,802 chainMm10,599 chainMm10,611 chainMm10,627 chainMm10,802 chainNetDanRer7,602 chainNetDanRer7,614 chainNetDanRer7,630 chainNetDanRer7,805 chainNetFr3,602 chainNetFr3,614 chainNetFr3,630 chainNetFr3,805 chainNetGalGal6,602 chainNetGalGal6,614 chainNetGalGal6,630 chainNetGalGal6,805 chainNetGasAcu1,602 chainNetGasAcu1,614 chainNetGasAcu1,630 chainNetGasAcu1,805 chainNetHg19,602 chainNetHg19,614 chainNetHg19,630 chainNetHg19,805 chainNetMm10,602 chainNetMm10,614 chainNetMm10,630 chainNetMm10,805 chainNetOryLat2,608 chainNetOryLat2,620 chainNetOryLat2,636 chainNetOryLat2,811 chainOryLat2,605 chainOryLat2,617 chainOryLat2,633 chainOryLat2,808 cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 gold,239 mrna,199 netDanRer7,599 netDanRer7,611 netDanRer7,627 netDanRer7,802 netFr3,599 netFr3,611 netFr3,627 netFr3,802 netGalGal6,599 netGalGal6,611 netGalGal6,627 netGalGal6,802 netGasAcu1,599 netGasAcu1,611 netGasAcu1,627 netGasAcu1,802 netHg19,599 netHg19,611 netHg19,627 netHg19,802 netMm10,599 netMm10,611 netMm10,627 netMm10,802 netOryLat2,605 netOryLat2,617 netOryLat2,633 netOryLat2,808 tRNAs,309 uniprot,57 windowmaskerSdust,80 xenoMrna,273 intron augustusGene,88 augustusGene,330 introns chainDanRer7,56 chainFr3,56 chainGalGal6,56 chainGasAcu1,56 chainHg19,56 chainMm10,56 chainNetDanRer7,59 chainNetFr3,59 chainNetGalGal6,59 chainNetGasAcu1,59 chainNetHg19,59 chainNetMm10,59 chainNetOryLat2,61 chainOryLat2,58 genscan,45 netDanRer7,56 netFr3,56 netGalGal6,56 netGasAcu1,56 netHg19,56 netMm10,56 netOryLat2,58 inv chainDanRer7,531 chainFr3,531 chainGalGal6,531 chainGasAcu1,531 chainHg19,531 chainMm10,531 chainNetDanRer7,534 chainNetFr3,534 chainNetGalGal6,534 chainNetGasAcu1,534 chainNetHg19,534 chainNetMm10,534 chainNetOryLat2,540 chainOryLat2,537 netDanRer7,531 netFr3,531 netGalGal6,531 netGasAcu1,531 netHg19,531 netMm10,531 netOryLat2,537 inversions chainDanRer7,110 chainDanRer7,174 chainFr3,110 chainFr3,174 chainGalGal6,110 chainGalGal6,174 chainGasAcu1,110 chainGasAcu1,174 chainHg19,110 chainHg19,174 chainMm10,110 chainMm10,174 chainNetDanRer7,113 chainNetDanRer7,177 chainNetFr3,113 chainNetFr3,177 chainNetGalGal6,113 chainNetGalGal6,177 chainNetGasAcu1,113 chainNetGasAcu1,177 chainNetHg19,113 chainNetHg19,177 chainNetMm10,113 chainNetMm10,177 chainNetOryLat2,117 chainNetOryLat2,181 chainOryLat2,114 chainOryLat2,178 netDanRer7,110 netDanRer7,174 netFr3,110 netFr3,174 netGalGal6,110 netGalGal6,174 netGasAcu1,110 netGasAcu1,174 netHg19,110 netHg19,174 netMm10,110 netMm10,174 netOryLat2,114 netOryLat2,178 invertebrate xenoMrna,20 inverted chainDanRer7,861 chainFr3,861 chainGalGal6,861 chainGasAcu1,861 chainHg19,861 chainMm10,861 chainNetDanRer7,864 chainNetFr3,864 chainNetGalGal6,864 chainNetGasAcu1,864 chainNetHg19,864 chainNetMm10,864 chainNetOryLat2,870 chainOryLat2,867 netDanRer7,861 netFr3,861 netGalGal6,861 netGasAcu1,861 netHg19,861 netMm10,861 netOryLat2,867 involve chainDanRer7,164 chainFr3,164 chainGalGal6,164 chainGasAcu1,164 chainHg19,164 chainMm10,164 chainNetDanRer7,167 chainNetFr3,167 chainNetGalGal6,167 chainNetGasAcu1,167 chainNetHg19,167 chainNetMm10,167 chainNetOryLat2,171 chainOryLat2,168 netDanRer7,164 netFr3,164 netGalGal6,164 netGasAcu1,164 netHg19,164 netMm10,164 netOryLat2,168 involved tRNAs,193 is blastHg18KG,139 chainDanRer7,277 chainDanRer7,297 chainDanRer7,476 chainFr3,277 chainFr3,297 chainFr3,476 chainGalGal6,277 chainGalGal6,297 chainGalGal6,476 chainGasAcu1,277 chainGasAcu1,297 chainGasAcu1,476 chainHg19,277 chainHg19,297 chainHg19,476 chainMm10,277 chainMm10,297 chainMm10,476 chainNetDanRer7,280 chainNetDanRer7,300 chainNetDanRer7,479 chainNetFr3,280 chainNetFr3,300 chainNetFr3,479 chainNetGalGal6,280 chainNetGalGal6,300 chainNetGalGal6,479 chainNetGasAcu1,280 chainNetGasAcu1,300 chainNetGasAcu1,479 chainNetHg19,280 chainNetHg19,300 chainNetHg19,479 chainNetMm10,280 chainNetMm10,300 chainNetMm10,479 chainNetOryLat2,284 chainNetOryLat2,304 chainNetOryLat2,485 chainOryLat2,281 chainOryLat2,301 chainOryLat2,482 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 gap,39 gap,46 gap,54 gap,88 gap,97 gc5Base,32 gold,50 gold,120 gold,124 microsat,88 mrna,228 mrna,244 mrna,280 mrna,297 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 netDanRer7,277 netDanRer7,297 netDanRer7,476 netFr3,277 netFr3,297 netFr3,476 netGalGal6,277 netGalGal6,297 netGalGal6,476 netGasAcu1,277 netGasAcu1,297 netGasAcu1,476 netHg19,277 netHg19,297 netHg19,476 netMm10,277 netMm10,297 netMm10,476 netOryLat2,281 netOryLat2,301 netOryLat2,482 simpleRepeat,28 tRNAs,25 tRNAs,125 transMapEnsemblV5,39 transMapEnsemblV5,275 transMapEnsemblV5,418 transMapEnsemblV5,422 transMapEnsemblV5,434 transMapEnsemblV5,480 transMapEstV5,244 transMapEstV5,387 transMapEstV5,391 transMapEstV5,403 transMapEstV5,449 transMapRefSeqV5,244 transMapRefSeqV5,387 transMapRefSeqV5,391 transMapRefSeqV5,403 transMapRefSeqV5,449 transMapRnaV5,244 transMapRnaV5,387 transMapRnaV5,391 transMapRnaV5,403 transMapRnaV5,449 transMapV5,350 transMapV5,493 transMapV5,497 transMapV5,509 transMapV5,555 uniprot,159 uniprot,222 uniprot,417 uniprot,626 uniprot,707 uniprot,839 uniprot,911 uniprot,958 uniprot,972 uniprot,1052 uniprot,1081 uniprot,1209 uniprot,1245 uniprot,1256 uniprot,1264 uniprot,1283 uniprot,1334 uniprot,1390 uniprot,1564 uniprot,1578 uniprot,1603 uniprot,1630 uniprot,1732 windowmaskerSdust,25 windowmaskerSdust,39 xenoMrna,65 xenoMrna,119 xenoMrna,125 xenoMrna,302 xenoMrna,318 xenoMrna,354 xenoMrna,371 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 isoform unipAliSwissprot,13 uniprot,157 uniprot,186 uniprot,671 isoforms unipAliSwissprot,17 uniprot,145 uniprot,164 isotype tRNAs,248 issue mrna,441 tRNAs,388 uniprot,2004 xenoMrna,510 xenoRefGene,353 xenoRefGene,387 it chainDanRer7,89 chainDanRer7,276 chainDanRer7,530 chainDanRer7,542 chainFr3,89 chainFr3,276 chainFr3,530 chainFr3,542 chainGalGal6,89 chainGalGal6,276 chainGalGal6,530 chainGalGal6,542 chainGasAcu1,89 chainGasAcu1,276 chainGasAcu1,530 chainGasAcu1,542 chainHg19,89 chainHg19,276 chainHg19,530 chainHg19,542 chainMm10,89 chainMm10,276 chainMm10,530 chainMm10,542 chainNetDanRer7,92 chainNetDanRer7,279 chainNetDanRer7,533 chainNetDanRer7,545 chainNetFr3,92 chainNetFr3,279 chainNetFr3,533 chainNetFr3,545 chainNetGalGal6,92 chainNetGalGal6,279 chainNetGalGal6,533 chainNetGalGal6,545 chainNetGasAcu1,92 chainNetGasAcu1,279 chainNetGasAcu1,533 chainNetGasAcu1,545 chainNetHg19,92 chainNetHg19,279 chainNetHg19,533 chainNetHg19,545 chainNetMm10,92 chainNetMm10,279 chainNetMm10,533 chainNetMm10,545 chainNetOryLat2,96 chainNetOryLat2,283 chainNetOryLat2,539 chainNetOryLat2,551 chainOryLat2,93 chainOryLat2,280 chainOryLat2,536 chainOryLat2,548 gap,45 gaze,70 genscan,143 netDanRer7,89 netDanRer7,276 netDanRer7,530 netDanRer7,542 netFr3,89 netFr3,276 netFr3,530 netFr3,542 netGalGal6,89 netGalGal6,276 netGalGal6,530 netGalGal6,542 netGasAcu1,89 netGasAcu1,276 netGasAcu1,530 netGasAcu1,542 netHg19,89 netHg19,276 netHg19,530 netHg19,542 netMm10,89 netMm10,276 netMm10,530 netMm10,542 netOryLat2,93 netOryLat2,280 netOryLat2,536 netOryLat2,548 uniprot,228 uniprot,625 uniprot,1586 item nestedRepeats,197 xenoRefGene,75 items chainDanRer7,494 chainFr3,494 chainGalGal6,494 chainGasAcu1,494 chainHg19,494 chainMm10,494 chainNetDanRer7,497 chainNetFr3,497 chainNetGalGal6,497 chainNetGasAcu1,497 chainNetHg19,497 chainNetMm10,497 chainNetOryLat2,503 chainOryLat2,500 mrna,44 mrna,82 mrna,92 mrna,275 nestedRepeats,171 nestedRepeats,180 netDanRer7,494 netFr3,494 netGalGal6,494 netGasAcu1,494 netHg19,494 netMm10,494 netOryLat2,500 xenoMrna,48 xenoMrna,156 xenoMrna,166 xenoMrna,349 xenoRefGene,102 its cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 uniprot,230 uniprot,762 uniprot,1316 uniprot,1348 itself uniprot,715 j blastHg18KG,168 cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 ensGene,183 genscan,220 mrna,428 nestedRepeats,341 tRNAs,429 transMapEnsemblV5,785 transMapEstV5,754 transMapRefSeqV5,754 transMapRnaV5,754 transMapV5,860 xenoMrna,497 xenoRefGene,332 jan chainDanRer7,1103 chainFr3,1103 chainGalGal6,1103 chainGasAcu1,1103 chainHg19,1103 chainMm10,1103 chainNetDanRer7,1106 chainNetFr3,1106 chainNetGalGal6,1106 chainNetGasAcu1,1106 chainNetHg19,1106 chainNetMm10,1106 chainNetOryLat2,1112 chainOryLat2,1109 ensGene,199 microsat,129 mrna,437 netDanRer7,1103 netFr3,1103 netGalGal6,1103 netGasAcu1,1103 netHg19,1103 netMm10,1103 netOryLat2,1109 simpleRepeat,89 tRNAs,385 uniprot,2001 windowmaskerSdust,108 xenoMrna,506 xenoRefGene,350 xenoRefGene,383 jim blastHg18KG,181 blastHg18KG,194 chainDanRer7,959 chainDanRer7,986 chainDanRer7,1004 chainFr3,959 chainFr3,986 chainFr3,1004 chainGalGal6,959 chainGalGal6,986 chainGalGal6,1004 chainGasAcu1,959 chainGasAcu1,986 chainGasAcu1,1004 chainHg19,959 chainHg19,986 chainHg19,1004 chainMm10,959 chainMm10,986 chainMm10,1004 chainNetDanRer7,962 chainNetDanRer7,989 chainNetDanRer7,1007 chainNetFr3,962 chainNetFr3,989 chainNetFr3,1007 chainNetGalGal6,962 chainNetGalGal6,989 chainNetGalGal6,1007 chainNetGasAcu1,962 chainNetGasAcu1,989 chainNetGasAcu1,1007 chainNetHg19,962 chainNetHg19,989 chainNetHg19,1007 chainNetMm10,962 chainNetMm10,989 chainNetMm10,1007 chainNetOryLat2,968 chainNetOryLat2,995 chainNetOryLat2,1013 chainOryLat2,965 chainOryLat2,992 chainOryLat2,1010 netDanRer7,959 netDanRer7,986 netDanRer7,1004 netFr3,959 netFr3,986 netFr3,1004 netGalGal6,959 netGalGal6,986 netGalGal6,1004 netGasAcu1,959 netGasAcu1,986 netGasAcu1,1004 netHg19,959 netHg19,986 netHg19,1004 netMm10,959 netMm10,986 netMm10,1004 netOryLat2,965 netOryLat2,992 netOryLat2,1010 joined chainDanRer7,122 chainFr3,122 chainGalGal6,122 chainGasAcu1,122 chainHg19,122 chainMm10,122 chainNetDanRer7,125 chainNetFr3,125 chainNetGalGal6,125 chainNetGasAcu1,125 chainNetHg19,125 chainNetMm10,125 chainNetOryLat2,129 chainOryLat2,126 nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 netDanRer7,122 netFr3,122 netGalGal6,122 netGasAcu1,122 netHg19,122 netMm10,122 netOryLat2,126 journal nestedRepeats,349 jul chainDanRer7,4 chainDanRer7,66 chainDanRer7,300 chainNetDanRer7,5 chainNetDanRer7,69 chainNetDanRer7,303 chainNetDanRer7Viewchain,3 chainNetDanRer7Viewnet,3 cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 netDanRer7,4 netDanRer7,66 netDanRer7,300 jun tRNAs,408 jurka nestedRepeats,62 nestedRepeats,340 jz transMapEnsemblV5,787 transMapEstV5,756 transMapRefSeqV5,756 transMapRnaV5,756 transMapV5,862 k augustusGene,268 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karlin genscan,148 genscan,209 karsch-mizrachi mrna,423 xenoMrna,492 kasif genscan,193 kd xenoRefGene,318 xenoRefGene,360 kd-tree chainDanRer7,633 chainFr3,633 chainGalGal6,633 chainGasAcu1,633 chainHg19,633 chainMm10,633 chainNetDanRer7,636 chainNetFr3,636 chainNetGalGal6,636 chainNetGasAcu1,636 chainNetHg19,636 chainNetMm10,636 chainNetOryLat2,642 chainOryLat2,639 netDanRer7,633 netFr3,633 netGalGal6,633 netGasAcu1,633 netHg19,633 netMm10,633 netOryLat2,639 kd-trees chainDanRer7,651 chainFr3,651 chainGalGal6,651 chainGasAcu1,651 chainHg19,651 chainMm10,651 chainNetDanRer7,654 chainNetFr3,654 chainNetGalGal6,654 chainNetGasAcu1,654 chainNetHg19,654 chainNetMm10,654 chainNetOryLat2,660 chainOryLat2,657 netDanRer7,651 netFr3,651 netGalGal6,651 netGasAcu1,651 netHg19,651 netMm10,651 netOryLat2,657 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 uniprot,1486 kent blastHg18KG,182 blastHg18KG,195 chainDanRer7,960 chainDanRer7,987 chainDanRer7,1005 chainDanRer7,1040 chainDanRer7,1082 chainFr3,960 chainFr3,987 chainFr3,1005 chainFr3,1040 chainFr3,1082 chainGalGal6,960 chainGalGal6,987 chainGalGal6,1005 chainGalGal6,1040 chainGalGal6,1082 chainGasAcu1,960 chainGasAcu1,987 chainGasAcu1,1005 chainGasAcu1,1040 chainGasAcu1,1082 chainHg19,960 chainHg19,987 chainHg19,1005 chainHg19,1040 chainHg19,1082 chainMm10,960 chainMm10,987 chainMm10,1005 chainMm10,1040 chainMm10,1082 chainNetDanRer7,963 chainNetDanRer7,990 chainNetDanRer7,1008 chainNetDanRer7,1043 chainNetDanRer7,1085 chainNetFr3,963 chainNetFr3,990 chainNetFr3,1008 chainNetFr3,1043 chainNetFr3,1085 chainNetGalGal6,963 chainNetGalGal6,990 chainNetGalGal6,1008 chainNetGalGal6,1043 chainNetGalGal6,1085 chainNetGasAcu1,963 chainNetGasAcu1,990 chainNetGasAcu1,1008 chainNetGasAcu1,1043 chainNetGasAcu1,1085 chainNetHg19,963 chainNetHg19,990 chainNetHg19,1008 chainNetHg19,1043 chainNetHg19,1085 chainNetMm10,963 chainNetMm10,990 chainNetMm10,1008 chainNetMm10,1043 chainNetMm10,1085 chainNetOryLat2,969 chainNetOryLat2,996 chainNetOryLat2,1014 chainNetOryLat2,1049 chainNetOryLat2,1091 chainOryLat2,966 chainOryLat2,993 chainOryLat2,1011 chainOryLat2,1046 chainOryLat2,1088 mrna,447 netDanRer7,960 netDanRer7,987 netDanRer7,1005 netDanRer7,1040 netDanRer7,1082 netFr3,960 netFr3,987 netFr3,1005 netFr3,1040 netFr3,1082 netGalGal6,960 netGalGal6,987 netGalGal6,1005 netGalGal6,1040 netGalGal6,1082 netGasAcu1,960 netGasAcu1,987 netGasAcu1,1005 netGasAcu1,1040 netGasAcu1,1082 netHg19,960 netHg19,987 netHg19,1005 netHg19,1040 netHg19,1082 netMm10,960 netMm10,987 netMm10,1005 netMm10,1040 netMm10,1082 netOryLat2,966 netOryLat2,993 netOryLat2,1011 netOryLat2,1046 netOryLat2,1088 xenoMrna,516 xenoRefGene,300 kept mrna,396 xenoMrna,466 xenoRefGene,276 kevin gaze,25 kl gaze,74 km xenoRefGene,336 known blastHg18KG,26 chainDanRer7,910 chainFr3,910 chainGalGal6,910 chainGasAcu1,910 chainHg19,910 chainMm10,910 chainNetDanRer7,913 chainNetFr3,913 chainNetGalGal6,913 chainNetGasAcu1,913 chainNetHg19,913 chainNetMm10,913 chainNetOryLat2,919 chainOryLat2,916 gold,121 netDanRer7,910 netFr3,910 netGalGal6,910 netGasAcu1,910 netHg19,910 netMm10,910 netOryLat2,916 xenoRefGene,14 l cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 ensGene,179 transMapEnsemblV5,719 transMapEstV5,688 transMapRefSeqV5,688 transMapRnaV5,688 transMapV5,794 lab augustusGene,252 tRNAs,338 label genscan,98 xenoRefGene,99 xenoRefGene,111 xenoRefGene,134 labeled nestedRepeats,132 uniprot,457 xenoRefGene,104 labels nestedRepeats,161 xenoRefGene,76 landrum xenoRefGene,333 langton transMapEnsemblV5,718 transMapEstV5,687 transMapRefSeqV5,687 transMapRnaV5,687 transMapV5,793 largely chainDanRer7,141 chainFr3,141 chainGalGal6,141 chainGasAcu1,141 chainHg19,141 chainMm10,141 chainNetDanRer7,144 chainNetFr3,144 chainNetGalGal6,144 chainNetGasAcu1,144 chainNetHg19,144 chainNetMm10,144 chainNetOryLat2,148 chainOryLat2,145 netDanRer7,141 netFr3,141 netGalGal6,141 netGasAcu1,141 netHg19,141 netMm10,141 netOryLat2,145 largest chainDanRer7,389 chainFr3,389 chainGalGal6,389 chainGasAcu1,389 chainHg19,389 chainMm10,389 chainNetDanRer7,392 chainNetFr3,392 chainNetGalGal6,392 chainNetGasAcu1,392 chainNetHg19,392 chainNetMm10,392 chainNetOryLat2,398 chainOryLat2,395 netDanRer7,389 netFr3,389 netGalGal6,389 netGasAcu1,389 netHg19,389 netMm10,389 netOryLat2,395 lastz chainDanRer7,586 chainDanRer7,759 chainDanRer7,908 chainFr3,586 chainFr3,759 chainFr3,908 chainGalGal6,586 chainGalGal6,759 chainGalGal6,908 chainGasAcu1,586 chainGasAcu1,759 chainGasAcu1,908 chainHg19,586 chainHg19,759 chainHg19,908 chainMm10,586 chainMm10,759 chainMm10,908 chainNetDanRer7,589 chainNetDanRer7,762 chainNetDanRer7,911 chainNetFr3,589 chainNetFr3,762 chainNetFr3,911 chainNetGalGal6,589 chainNetGalGal6,762 chainNetGalGal6,911 chainNetGasAcu1,589 chainNetGasAcu1,762 chainNetGasAcu1,911 chainNetHg19,589 chainNetHg19,762 chainNetHg19,911 chainNetMm10,589 chainNetMm10,762 chainNetMm10,911 chainNetOryLat2,595 chainNetOryLat2,768 chainNetOryLat2,917 chainOryLat2,592 chainOryLat2,765 chainOryLat2,914 netDanRer7,586 netDanRer7,759 netDanRer7,908 netFr3,586 netFr3,759 netFr3,908 netGalGal6,586 netGalGal6,759 netGalGal6,908 netGasAcu1,586 netGasAcu1,759 netGasAcu1,908 netHg19,586 netHg19,759 netHg19,908 netMm10,586 netMm10,759 netMm10,908 netOryLat2,592 netOryLat2,765 netOryLat2,914 transMapV5,46 lau transMapEnsemblV5,730 transMapEstV5,699 transMapRefSeqV5,699 transMapRnaV5,699 transMapV5,805 lavtoaxt chainDanRer7,604 chainFr3,604 chainGalGal6,604 chainGasAcu1,604 chainHg19,604 chainMm10,604 chainNetDanRer7,607 chainNetFr3,607 chainNetGalGal6,607 chainNetGasAcu1,607 chainNetHg19,607 chainNetMm10,607 chainNetOryLat2,613 chainOryLat2,610 netDanRer7,604 netFr3,604 netGalGal6,604 netGasAcu1,604 netHg19,604 netMm10,604 netOryLat2,610 least blastHg18KG,126 microsat,29 microsat,78 mrna,387 xenoMrna,461 xenoRefGene,267 lee uniprot,1955 length augustusGene,82 cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 genscan,39 less transMapEnsemblV5,372 transMapEstV5,341 transMapRefSeqV5,341 transMapRnaV5,341 transMapV5,447 uniprot,680 xenoRefGene,231 level chainDanRer7,384 chainDanRer7,418 chainDanRer7,423 chainDanRer7,430 chainDanRer7,488 chainDanRer7,515 chainDanRer7,528 chainDanRer7,560 chainFr3,384 chainFr3,418 chainFr3,423 chainFr3,430 chainFr3,488 chainFr3,515 chainFr3,528 chainFr3,560 chainGalGal6,384 chainGalGal6,418 chainGalGal6,423 chainGalGal6,430 chainGalGal6,488 chainGalGal6,515 chainGalGal6,528 chainGalGal6,560 chainGasAcu1,384 chainGasAcu1,418 chainGasAcu1,423 chainGasAcu1,430 chainGasAcu1,488 chainGasAcu1,515 chainGasAcu1,528 chainGasAcu1,560 chainHg19,384 chainHg19,418 chainHg19,423 chainHg19,430 chainHg19,488 chainHg19,515 chainHg19,528 chainHg19,560 chainMm10,384 chainMm10,418 chainMm10,423 chainMm10,430 chainMm10,488 chainMm10,515 chainMm10,528 chainMm10,560 chainNetDanRer7,387 chainNetDanRer7,421 chainNetDanRer7,426 chainNetDanRer7,433 chainNetDanRer7,491 chainNetDanRer7,518 chainNetDanRer7,531 chainNetDanRer7,563 chainNetFr3,387 chainNetFr3,421 chainNetFr3,426 chainNetFr3,433 chainNetFr3,491 chainNetFr3,518 chainNetFr3,531 chainNetFr3,563 chainNetGalGal6,387 chainNetGalGal6,421 chainNetGalGal6,426 chainNetGalGal6,433 chainNetGalGal6,491 chainNetGalGal6,518 chainNetGalGal6,531 chainNetGalGal6,563 chainNetGasAcu1,387 chainNetGasAcu1,421 chainNetGasAcu1,426 chainNetGasAcu1,433 chainNetGasAcu1,491 chainNetGasAcu1,518 chainNetGasAcu1,531 chainNetGasAcu1,563 chainNetHg19,387 chainNetHg19,421 chainNetHg19,426 chainNetHg19,433 chainNetHg19,491 chainNetHg19,518 chainNetHg19,531 chainNetHg19,563 chainNetMm10,387 chainNetMm10,421 chainNetMm10,426 chainNetMm10,433 chainNetMm10,491 chainNetMm10,518 chainNetMm10,531 chainNetMm10,563 chainNetOryLat2,393 chainNetOryLat2,427 chainNetOryLat2,432 chainNetOryLat2,439 chainNetOryLat2,497 chainNetOryLat2,524 chainNetOryLat2,537 chainNetOryLat2,569 chainOryLat2,390 chainOryLat2,424 chainOryLat2,429 chainOryLat2,436 chainOryLat2,494 chainOryLat2,521 chainOryLat2,534 chainOryLat2,566 mrna,379 netDanRer7,384 netDanRer7,418 netDanRer7,423 netDanRer7,430 netDanRer7,488 netDanRer7,515 netDanRer7,528 netDanRer7,560 netFr3,384 netFr3,418 netFr3,423 netFr3,430 netFr3,488 netFr3,515 netFr3,528 netFr3,560 netGalGal6,384 netGalGal6,418 netGalGal6,423 netGalGal6,430 netGalGal6,488 netGalGal6,515 netGalGal6,528 netGalGal6,560 netGasAcu1,384 netGasAcu1,418 netGasAcu1,423 netGasAcu1,430 netGasAcu1,488 netGasAcu1,515 netGasAcu1,528 netGasAcu1,560 netHg19,384 netHg19,418 netHg19,423 netHg19,430 netHg19,488 netHg19,515 netHg19,528 netHg19,560 netMm10,384 netMm10,418 netMm10,423 netMm10,430 netMm10,488 netMm10,515 netMm10,528 netMm10,560 netOryLat2,390 netOryLat2,424 netOryLat2,429 netOryLat2,436 netOryLat2,494 netOryLat2,521 netOryLat2,534 netOryLat2,566 xenoMrna,453 xenoRefGene,60 xenoRefGene,259 levels cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 libraries nestedRepeats,258 nestedRepeats,317 library nestedRepeats,47 lifted uniprot,1492 lifting uniprot,1843 liftover uniprot,887 uniprot,1878 uniprot,1897 uniprot,1920 uniprot,1924 uniprot,1932 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 unipAliSwissprot,14 uniprot,506 uniprot,592 xenoRefGene,69 light-blue uniprot,178 like chainDanRer7,47 chainDanRer7,55 chainFr3,47 chainFr3,55 chainGalGal6,47 chainGalGal6,55 chainGasAcu1,47 chainGasAcu1,55 chainHg19,47 chainHg19,55 chainMm10,47 chainMm10,55 chainNetDanRer7,50 chainNetDanRer7,58 chainNetFr3,50 chainNetFr3,58 chainNetGalGal6,50 chainNetGalGal6,58 chainNetGasAcu1,50 chainNetGasAcu1,58 chainNetHg19,50 chainNetHg19,58 chainNetMm10,50 chainNetMm10,58 chainNetOryLat2,52 chainNetOryLat2,60 chainOryLat2,49 chainOryLat2,57 ensGene,148 netDanRer7,47 netDanRer7,55 netFr3,47 netFr3,55 netGalGal6,47 netGalGal6,55 netGasAcu1,47 netGasAcu1,55 netHg19,47 netHg19,55 netMm10,47 netMm10,55 netOryLat2,49 netOryLat2,57 uniprot,1541 likely augustusGene,111 microsat,17 tRNAs,126 tRNAs,169 transMapV5,93 line chainDanRer7,466 chainFr3,466 chainGalGal6,466 chainGasAcu1,466 chainHg19,466 chainMm10,466 chainNetDanRer7,469 chainNetFr3,469 chainNetGalGal6,469 chainNetGasAcu1,469 chainNetHg19,469 chainNetMm10,469 chainNetOryLat2,475 chainOryLat2,472 gap,53 gold,123 nestedRepeats,151 netDanRer7,466 netFr3,466 netGalGal6,466 netGasAcu1,466 netHg19,466 netMm10,466 netOryLat2,472 uniprot,1872 uniprot,1876 line-up chainDanRer7,533 chainFr3,533 chainGalGal6,533 chainGasAcu1,533 chainHg19,533 chainMm10,533 chainNetDanRer7,536 chainNetFr3,536 chainNetGalGal6,536 chainNetGasAcu1,536 chainNetHg19,536 chainNetMm10,536 chainNetOryLat2,542 chainOryLat2,539 netDanRer7,533 netFr3,533 netGalGal6,533 netGasAcu1,533 netHg19,533 netMm10,533 netOryLat2,539 line-ups chainDanRer7,518 chainFr3,518 chainGalGal6,518 chainGasAcu1,518 chainHg19,518 chainMm10,518 chainNetDanRer7,521 chainNetFr3,521 chainNetGalGal6,521 chainNetGasAcu1,521 chainNetHg19,521 chainNetMm10,521 chainNetOryLat2,527 chainOryLat2,524 netDanRer7,518 netFr3,518 netGalGal6,518 netGasAcu1,518 netHg19,518 netMm10,518 netOryLat2,524 lineage transMapEnsemblV5,807 transMapEstV5,776 transMapRefSeqV5,776 transMapRnaV5,776 transMapV5,882 lineage-specific chainDanRer7,934 chainFr3,934 chainGalGal6,934 chainGasAcu1,934 chainHg19,934 chainMm10,934 chainNetDanRer7,937 chainNetFr3,937 chainNetGalGal6,937 chainNetGasAcu1,937 chainNetHg19,937 chainNetMm10,937 chainNetOryLat2,943 chainOryLat2,940 netDanRer7,934 netFr3,934 netGalGal6,934 netGasAcu1,934 netHg19,934 netMm10,934 netOryLat2,940 linear chainDanRer7,693 chainFr3,693 chainGalGal6,693 chainGasAcu1,693 chainHg19,693 chainMm10,693 chainNetDanRer7,696 chainNetFr3,696 chainNetGalGal6,696 chainNetGasAcu1,696 chainNetHg19,696 chainNetMm10,696 chainNetOryLat2,702 chainOryLat2,699 netDanRer7,693 netFr3,693 netGalGal6,693 netGasAcu1,693 netHg19,693 netMm10,693 netOryLat2,699 lineargap chainDanRer7,699 chainFr3,699 chainGalGal6,699 chainGasAcu1,699 chainHg19,699 chainMm10,699 chainNetDanRer7,702 chainNetFr3,702 chainNetGalGal6,702 chainNetGasAcu1,702 chainNetHg19,702 chainNetMm10,702 chainNetOryLat2,708 chainOryLat2,705 netDanRer7,699 netFr3,699 netGalGal6,699 netGasAcu1,699 netHg19,699 netMm10,699 netOryLat2,705 lines chainDanRer7,129 chainDanRer7,136 chainDanRer7,158 chainDanRer7,446 chainFr3,129 chainFr3,136 chainFr3,158 chainFr3,446 chainGalGal6,129 chainGalGal6,136 chainGalGal6,158 chainGalGal6,446 chainGasAcu1,129 chainGasAcu1,136 chainGasAcu1,158 chainGasAcu1,446 chainHg19,129 chainHg19,136 chainHg19,158 chainHg19,446 chainMm10,129 chainMm10,136 chainMm10,158 chainMm10,446 chainNetDanRer7,132 chainNetDanRer7,139 chainNetDanRer7,161 chainNetDanRer7,449 chainNetFr3,132 chainNetFr3,139 chainNetFr3,161 chainNetFr3,449 chainNetGalGal6,132 chainNetGalGal6,139 chainNetGalGal6,161 chainNetGalGal6,449 chainNetGasAcu1,132 chainNetGasAcu1,139 chainNetGasAcu1,161 chainNetGasAcu1,449 chainNetHg19,132 chainNetHg19,139 chainNetHg19,161 chainNetHg19,449 chainNetMm10,132 chainNetMm10,139 chainNetMm10,161 chainNetMm10,449 chainNetOryLat2,136 chainNetOryLat2,143 chainNetOryLat2,165 chainNetOryLat2,455 chainOryLat2,133 chainOryLat2,140 chainOryLat2,162 chainOryLat2,452 nestedRepeats,131 netDanRer7,129 netDanRer7,136 netDanRer7,158 netDanRer7,446 netFr3,129 netFr3,136 netFr3,158 netFr3,446 netGalGal6,129 netGalGal6,136 netGalGal6,158 netGalGal6,446 netGasAcu1,129 netGasAcu1,136 netGasAcu1,158 netGasAcu1,446 netHg19,129 netHg19,136 netHg19,158 netHg19,446 netMm10,129 netMm10,136 netMm10,158 netMm10,446 netOryLat2,133 netOryLat2,140 netOryLat2,162 netOryLat2,452 link gc5Base,63 uniprot,491 uniprot,1675 linked gap,139 linking gold,227 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 uniprot,1919 lipid uniprot,346 lipman blastHg18KG,161 mrna,425 xenoMrna,494 lipoification uniprot,577 list mrna,156 tRNAs,48 uniprot,979 uniprot,1165 uniprot,1831 xenoMrna,230 listed ensGene,49 literature uniprot,434 lm uniprot,2019 loaded windowmaskerSdust,79 local blastHg18KG,164 chainDanRer7,109 chainDanRer7,180 chainFr3,109 chainFr3,180 chainGalGal6,109 chainGalGal6,180 chainGasAcu1,109 chainGasAcu1,180 chainHg19,109 chainHg19,180 chainMm10,109 chainMm10,180 chainNetDanRer7,112 chainNetDanRer7,183 chainNetFr3,112 chainNetFr3,183 chainNetGalGal6,112 chainNetGalGal6,183 chainNetGasAcu1,112 chainNetGasAcu1,183 chainNetHg19,112 chainNetHg19,183 chainNetMm10,112 chainNetMm10,183 chainNetOryLat2,116 chainNetOryLat2,187 chainOryLat2,113 chainOryLat2,184 ensGene,73 nestedRepeats,98 netDanRer7,109 netDanRer7,180 netFr3,109 netFr3,180 netGalGal6,109 netGalGal6,180 netGasAcu1,109 netGasAcu1,180 netHg19,109 netHg19,180 netMm10,109 netMm10,180 netOryLat2,113 netOryLat2,184 localized gap,166 located simpleRepeat,21 location chainDanRer7,248 chainFr3,248 chainGalGal6,248 chainGasAcu1,248 chainHg19,248 chainMm10,248 chainNetDanRer7,251 chainNetFr3,251 chainNetGalGal6,251 chainNetGasAcu1,251 chainNetHg19,251 chainNetMm10,251 chainNetOryLat2,255 chainOryLat2,252 netDanRer7,248 netFr3,248 netGalGal6,248 netGasAcu1,248 netHg19,248 netMm10,248 netOryLat2,252 transMapEnsemblV5,401 transMapEnsemblV5,411 transMapEnsemblV5,478 transMapEstV5,370 transMapEstV5,380 transMapEstV5,447 transMapRefSeqV5,370 transMapRefSeqV5,380 transMapRefSeqV5,447 transMapRnaV5,370 transMapRnaV5,380 transMapRnaV5,447 transMapV5,476 transMapV5,486 transMapV5,553 uniprot,554 uniprot,767 uniprot,1417 locations gap,3 transMapEnsemblV5,490 transMapEstV5,459 transMapRefSeqV5,459 transMapRnaV5,459 transMapV5,565 uniprot,451 logic mrna,223 xenoMrna,297 long-established transMapEnsemblV5,802 transMapEstV5,771 transMapRefSeqV5,771 transMapRnaV5,771 transMapV5,877 longer chainDanRer7,81 chainFr3,81 chainGalGal6,81 chainGasAcu1,81 chainHg19,81 chainMm10,81 chainNetDanRer7,84 chainNetFr3,84 chainNetGalGal6,84 chainNetGasAcu1,84 chainNetHg19,84 chainNetMm10,84 chainNetOryLat2,88 chainOryLat2,85 netDanRer7,81 netFr3,81 netGalGal6,81 netGasAcu1,81 netHg19,81 netMm10,81 netOryLat2,85 tRNAs,192 longest chainDanRer7,511 chainFr3,511 chainGalGal6,511 chainGasAcu1,511 chainHg19,511 chainMm10,511 chainNetDanRer7,514 chainNetFr3,514 chainNetGalGal6,514 chainNetGasAcu1,514 chainNetHg19,514 chainNetMm10,514 chainNetOryLat2,520 chainOryLat2,517 netDanRer7,511 netFr3,511 netGalGal6,511 netGasAcu1,511 netHg19,511 netMm10,511 netOryLat2,517 look chainDanRer7,46 chainFr3,46 chainGalGal6,46 chainGasAcu1,46 chainHg19,46 chainMm10,46 chainNetDanRer7,49 chainNetFr3,49 chainNetGalGal6,49 chainNetGasAcu1,49 chainNetHg19,49 chainNetMm10,49 chainNetOryLat2,51 chainOryLat2,48 netDanRer7,46 netFr3,46 netGalGal6,46 netGasAcu1,46 netHg19,46 netMm10,46 netOryLat2,48 loose chainGalGal6,700 chainHg19,700 chainMm10,700 chainNetGalGal6,703 chainNetHg19,703 chainNetMm10,703 netGalGal6,700 netHg19,700 netMm10,700 loss tRNAs,231 losses transMapEnsemblV5,800 transMapEstV5,769 transMapRefSeqV5,769 transMapRnaV5,769 transMapV5,875 lot uniprot,1950 low nestedRepeats,39 tRNAs,293 lowe tRNAs,337 tRNAs,368 tRNAs,440 transMapEnsemblV5,790 transMapEstV5,759 transMapRefSeqV5,759 transMapRnaV5,759 transMapV5,865 lower chainDanRer7,487 chainFr3,487 chainGalGal6,487 chainGasAcu1,487 chainHg19,487 chainMm10,487 chainNetDanRer7,490 chainNetFr3,490 chainNetGalGal6,490 chainNetGasAcu1,490 chainNetHg19,490 chainNetMm10,490 chainNetOryLat2,496 chainOryLat2,493 netDanRer7,487 netFr3,487 netGalGal6,487 netGasAcu1,487 netHg19,487 netMm10,487 netOryLat2,493 lower-level chainDanRer7,850 chainDanRer7,856 chainFr3,850 chainFr3,856 chainGalGal6,850 chainGalGal6,856 chainGasAcu1,850 chainGasAcu1,856 chainHg19,850 chainHg19,856 chainMm10,850 chainMm10,856 chainNetDanRer7,853 chainNetDanRer7,859 chainNetFr3,853 chainNetFr3,859 chainNetGalGal6,853 chainNetGalGal6,859 chainNetGasAcu1,853 chainNetGasAcu1,859 chainNetHg19,853 chainNetHg19,859 chainNetMm10,853 chainNetMm10,859 chainNetOryLat2,859 chainNetOryLat2,865 chainOryLat2,856 chainOryLat2,862 netDanRer7,850 netDanRer7,856 netFr3,850 netFr3,856 netGalGal6,850 netGalGal6,856 netGasAcu1,850 netGasAcu1,856 netHg19,850 netHg19,856 netMm10,850 netMm10,856 netOryLat2,856 netOryLat2,862 ls-snp uniprot,1536 m augustusGene,287 augustusGene,289 augustusGene,317 cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 transMapEnsemblV5,714 transMapEnsemblV5,721 transMapEnsemblV5,755 transMapEnsemblV5,757 transMapEnsemblV5,789 transMapEstV5,683 transMapEstV5,690 transMapEstV5,724 transMapEstV5,726 transMapEstV5,758 transMapRefSeqV5,683 transMapRefSeqV5,690 transMapRefSeqV5,724 transMapRefSeqV5,726 transMapRefSeqV5,758 transMapRnaV5,683 transMapRnaV5,690 transMapRnaV5,724 transMapRnaV5,726 transMapRnaV5,758 transMapV5,789 transMapV5,796 transMapV5,830 transMapV5,832 transMapV5,864 made transMapEnsemblV5,393 transMapEstV5,362 transMapRefSeqV5,362 transMapRnaV5,362 transMapV5,468 uniprot,931 uniprot,938 maglott xenoRefGene,363 mailing uniprot,1830 main unipAliSwissprot,12 uniprot,156 uniprot,1548 maintained tRNAs,334 uniprot,719 make blastHg18KG,66 tRNAs,252 transMapEnsemblV5,427 transMapEstV5,396 transMapRefSeqV5,396 transMapRnaV5,396 transMapV5,502 uniprot,1406 making tRNAs,356 uniprot,1978 mammalian nestedRepeats,368 nestedRepeats,382 xenoRefGene,343 manner uniprot,1469 manual uniprot,1652 many chainDanRer7,397 chainFr3,397 chainGalGal6,397 chainGasAcu1,397 chainHg19,397 chainMm10,397 chainNetDanRer7,400 chainNetFr3,400 chainNetGalGal6,400 chainNetGasAcu1,400 chainNetHg19,400 chainNetMm10,400 chainNetOryLat2,406 chainOryLat2,403 mrna,91 netDanRer7,397 netFr3,397 netGalGal6,397 netGasAcu1,397 netHg19,397 netMm10,397 netOryLat2,403 uniprot,932 uniprot,1124 xenoMrna,165 map chainDanRer7,325 chainFr3,325 chainGalGal6,325 chainGasAcu1,325 chainHg19,325 chainMm10,325 chainNetDanRer7,328 chainNetFr3,328 chainNetGalGal6,328 chainNetGasAcu1,328 chainNetHg19,328 chainNetMm10,328 chainNetOryLat2,334 chainOryLat2,331 gap,143 netDanRer7,325 netFr3,325 netGalGal6,325 netGasAcu1,325 netHg19,325 netMm10,325 netOryLat2,331 transMapEnsemblV5,292 transMapEstV5,261 transMapRefSeqV5,261 transMapRnaV5,261 transMapV5,367 uniprot,758 uniprot,1885 mapped augustusGene,298 blastHg18KG,5 nestedRepeats,233 transMapEnsemblV5,378 transMapEnsemblV5,410 transMapEnsemblV5,468 transMapEnsemblV5,766 transMapEstV5,347 transMapEstV5,379 transMapEstV5,437 transMapEstV5,735 transMapRefSeqV5,347 transMapRefSeqV5,379 transMapRefSeqV5,437 transMapRefSeqV5,735 transMapRnaV5,347 transMapRnaV5,379 transMapRnaV5,437 transMapRnaV5,735 transMapV5,130 transMapV5,453 transMapV5,485 transMapV5,543 transMapV5,841 uniprot,26 uniprot,97 uniprot,117 uniprot,132 uniprot,200 uniprot,213 uniprot,632 uniprot,1517 mapping cytoBandIdeo,7 gap,4 gc5Base,8 gold,5 transMapEnsemblV5,265 transMapEnsemblV5,285 transMapEnsemblV5,298 transMapEstV5,234 transMapEstV5,254 transMapEstV5,267 transMapRefSeqV5,234 transMapRefSeqV5,254 transMapRefSeqV5,267 transMapRnaV5,234 transMapRnaV5,254 transMapRnaV5,267 transMapV5,340 transMapV5,360 transMapV5,373 uniprot,725 uniprot,752 uniprot,775 uniprot,904 uniprot,1213 uniprot,1322 uniprot,1613 uniprot,1853 mappings transMapEnsemblV5,7 transMapEnsemblV5,500 transMapEstV5,5 transMapEstV5,469 transMapRefSeqV5,6 transMapRefSeqV5,469 transMapRnaV5,6 transMapRnaV5,469 transMapV5,575 uniprot,1362 maps transMapEnsemblV5,474 transMapEnsemblV5,487 transMapEstV5,443 transMapEstV5,456 transMapRefSeqV5,443 transMapRefSeqV5,456 transMapRnaV5,443 transMapRnaV5,456 transMapV5,71 transMapV5,549 transMapV5,562 mar augustusGene,309 chainGalGal6,4 chainGalGal6,66 chainGalGal6,300 chainNetGalGal6,5 chainNetGalGal6,69 chainNetGalGal6,303 chainNetGalGal6Viewchain,3 chainNetGalGal6Viewnet,3 netGalGal6,4 netGalGal6,66 netGalGal6,300 tRNAs,461 transMapEnsemblV5,777 transMapEstV5,746 transMapRefSeqV5,746 transMapRnaV5,746 transMapV5,852 march gold,17 mario augustusGene,102 augustusGene,283 mark transMapEnsemblV5,679 transMapEstV5,648 transMapRefSeqV5,648 transMapRnaV5,648 transMapV5,754 uniprot,1539 uniprot,1956 marked gap,180 tRNAs,287 markers microsat,23 markov augustusGene,325 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 gaze,107 windowmaskerSdust,5 windowmaskerSdust,16 masker windowmaskerSdust,102 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match chainDanRer7,253 chainDanRer7,512 chainDanRer7,550 chainFr3,253 chainFr3,512 chainFr3,550 chainGalGal6,253 chainGalGal6,512 chainGalGal6,550 chainGasAcu1,253 chainGasAcu1,512 chainGasAcu1,550 chainHg19,253 chainHg19,512 chainHg19,550 chainMm10,253 chainMm10,512 chainMm10,550 chainNetDanRer7,256 chainNetDanRer7,515 chainNetDanRer7,553 chainNetFr3,256 chainNetFr3,515 chainNetFr3,553 chainNetGalGal6,256 chainNetGalGal6,515 chainNetGalGal6,553 chainNetGasAcu1,256 chainNetGasAcu1,515 chainNetGasAcu1,553 chainNetHg19,256 chainNetHg19,515 chainNetHg19,553 chainNetMm10,256 chainNetMm10,515 chainNetMm10,553 chainNetOryLat2,260 chainNetOryLat2,521 chainNetOryLat2,559 chainOryLat2,257 chainOryLat2,518 chainOryLat2,556 mrna,233 mrna,248 mrna,289 mrna,307 netDanRer7,253 netDanRer7,512 netDanRer7,550 netFr3,253 netFr3,512 netFr3,550 netGalGal6,253 netGalGal6,512 netGalGal6,550 netGasAcu1,253 netGasAcu1,512 netGasAcu1,550 netHg19,253 netHg19,512 netHg19,550 netMm10,253 netMm10,512 netMm10,550 netOryLat2,257 netOryLat2,518 netOryLat2,556 uniprot,1305 uniprot,1341 xenoMrna,83 xenoMrna,307 xenoMrna,322 xenoMrna,363 xenoMrna,381 matched blastHg18KG,124 matches mrna,51 xenoMrna,55 matching chainDanRer7,256 chainFr3,256 chainGalGal6,256 chainGasAcu1,256 chainHg19,256 chainMm10,256 chainNetDanRer7,259 chainNetFr3,259 chainNetGalGal6,259 chainNetGasAcu1,259 chainNetHg19,259 chainNetMm10,259 chainNetOryLat2,263 chainOryLat2,260 netDanRer7,256 netFr3,256 netGalGal6,256 netGasAcu1,256 netHg19,256 netMm10,256 netOryLat2,260 uniprot,1068 uniprot,1075 xenoMrna,98 matrix chainDanRer7,663 chainDanRer7,695 chainFr3,663 chainFr3,695 chainGalGal6,663 chainGalGal6,695 chainGasAcu1,663 chainGasAcu1,695 chainHg19,663 chainHg19,695 chainMm10,663 chainMm10,695 chainNetDanRer7,666 chainNetDanRer7,698 chainNetFr3,666 chainNetFr3,698 chainNetGalGal6,666 chainNetGalGal6,698 chainNetGasAcu1,666 chainNetGasAcu1,698 chainNetHg19,666 chainNetHg19,698 chainNetMm10,666 chainNetMm10,698 chainNetOryLat2,672 chainNetOryLat2,704 chainOryLat2,669 chainOryLat2,701 netDanRer7,663 netDanRer7,695 netFr3,663 netFr3,695 netGalGal6,663 netGalGal6,695 netGasAcu1,663 netGasAcu1,695 netHg19,663 netHg19,695 netMm10,663 netMm10,695 netOryLat2,669 netOryLat2,701 tRNAs,494 mature unipChain,3 uniprot,251 uniprot,292 maximally chainDanRer7,655 chainFr3,655 chainGalGal6,655 chainGasAcu1,655 chainHg19,655 chainMm10,655 chainNetDanRer7,658 chainNetFr3,658 chainNetGalGal6,658 chainNetGasAcu1,658 chainNetHg19,658 chainNetMm10,658 chainNetOryLat2,664 chainOryLat2,661 cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 netDanRer7,655 netFr3,655 netGalGal6,655 netGasAcu1,655 netHg19,655 netMm10,655 netOryLat2,661 maximilian uniprot,1944 maximum blastHg18KG,91 maxtracks augustusGene,139 may chainDanRer7,171 chainDanRer7,426 chainFr3,171 chainFr3,426 chainGalGal6,171 chainGalGal6,426 chainGasAcu1,171 chainGasAcu1,426 chainHg19,171 chainHg19,426 chainMm10,171 chainMm10,426 chainNetDanRer7,174 chainNetDanRer7,429 chainNetFr3,174 chainNetFr3,429 chainNetGalGal6,174 chainNetGalGal6,429 chainNetGasAcu1,174 chainNetGasAcu1,429 chainNetHg19,174 chainNetHg19,429 chainNetMm10,174 chainNetMm10,429 chainNetOryLat2,178 chainNetOryLat2,435 chainOryLat2,175 chainOryLat2,432 cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 gc5Base,40 gold,258 mrna,87 mrna,205 mrna,313 nestedRepeats,268 nestedRepeats,290 netDanRer7,171 netDanRer7,426 netFr3,171 netFr3,426 netGalGal6,171 netGalGal6,426 netGasAcu1,171 netGasAcu1,426 netHg19,171 netHg19,426 netMm10,171 netMm10,426 netOryLat2,175 netOryLat2,432 simpleRepeat,43 tRNAs,210 tRNAs,212 tRNAs,325 transMapEnsemblV5,107 transMapEnsemblV5,142 transMapEstV5,76 transMapEstV5,111 transMapRefSeqV5,76 transMapRefSeqV5,111 transMapRnaV5,76 transMapRnaV5,111 transMapV5,182 transMapV5,217 uniprot,2046 xenoMrna,161 xenoMrna,279 xenoMrna,387 mb gold,253 mcgarvey xenoRefGene,335 md5 uniprot,1601 mean tRNAs,117 medaka chainNetOryLat2,1 chainNetOryLat2,4 chainNetOryLat2,70 chainNetOryLat2,103 chainNetOryLat2,155 chainNetOryLat2,273 chainNetOryLat2,298 chainNetOryLat2,581 chainNetOryLat2,629 chainNetOryLat2Viewchain,2 chainNetOryLat2Viewnet,2 chainOryLat2,1 chainOryLat2,3 chainOryLat2,67 chainOryLat2,100 chainOryLat2,152 chainOryLat2,270 chainOryLat2,295 chainOryLat2,578 chainOryLat2,626 netOryLat2,1 netOryLat2,3 netOryLat2,67 netOryLat2,100 netOryLat2,152 netOryLat2,270 netOryLat2,295 netOryLat2,578 netOryLat2,626 medaka1 chainNetOryLat2,9 chainNetOryLat2,75 chainNetOryLat2,311 chainNetOryLat2Viewchain,7 chainNetOryLat2Viewnet,7 chainOryLat2,8 chainOryLat2,72 chainOryLat2,308 netOryLat2,8 netOryLat2,72 netOryLat2,308 mediating uniprot,314 medium chainDanRer7,700 chainFr3,700 chainGasAcu1,700 chainNetDanRer7,703 chainNetFr3,703 chainNetGasAcu1,703 chainNetOryLat2,709 chainOryLat2,706 netDanRer7,700 netFr3,700 netGasAcu1,700 netOryLat2,706 xenoRefGene,71 mellifera augustusGene,216 mementos nestedRepeats,377 menu xenoRefGene,172 method ensGene,120 uniprot,726 uniprot,753 uniprot,776 methods augustusGene,46 blastHg18KG,35 chainDanRer7,562 chainDanRer7,763 chainFr3,562 chainFr3,763 chainGalGal6,562 chainGalGal6,763 chainGasAcu1,562 chainGasAcu1,763 chainHg19,562 chainHg19,763 chainMm10,562 chainMm10,763 chainNetDanRer7,565 chainNetDanRer7,766 chainNetFr3,565 chainNetFr3,766 chainNetGalGal6,565 chainNetGalGal6,766 chainNetGasAcu1,565 chainNetGasAcu1,766 chainNetHg19,565 chainNetHg19,766 chainNetMm10,565 chainNetMm10,766 chainNetOryLat2,571 chainNetOryLat2,772 chainOryLat2,568 chainOryLat2,769 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 ensGene,29 ensGene,35 gaze,57 genscan,130 genscan,197 gold,175 microsat,45 mrna,343 nestedRepeats,244 netDanRer7,562 netDanRer7,763 netFr3,562 netFr3,763 netGalGal6,562 netGalGal6,763 netGasAcu1,562 netGasAcu1,763 netHg19,562 netHg19,763 netMm10,562 netMm10,763 netOryLat2,568 netOryLat2,769 simpleRepeat,55 transMapEnsemblV5,151 transMapEstV5,120 transMapRefSeqV5,120 transMapRnaV5,120 transMapV5,226 uniprot,777 windowmaskerSdust,46 xenoMrna,417 xenoRefGene,215 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 microsatellite microsat,1 microsat,22 microsatellites microsat,2 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller blastHg18KG,157 chainDanRer7,928 chainDanRer7,965 chainDanRer7,1026 chainDanRer7,1046 chainDanRer7,1094 chainFr3,928 chainFr3,965 chainFr3,1026 chainFr3,1046 chainFr3,1094 chainGalGal6,928 chainGalGal6,965 chainGalGal6,1026 chainGalGal6,1046 chainGalGal6,1094 chainGasAcu1,928 chainGasAcu1,965 chainGasAcu1,1026 chainGasAcu1,1046 chainGasAcu1,1094 chainHg19,928 chainHg19,965 chainHg19,1026 chainHg19,1046 chainHg19,1094 chainMm10,928 chainMm10,965 chainMm10,1026 chainMm10,1046 chainMm10,1094 chainNetDanRer7,931 chainNetDanRer7,968 chainNetDanRer7,1029 chainNetDanRer7,1049 chainNetDanRer7,1097 chainNetFr3,931 chainNetFr3,968 chainNetFr3,1029 chainNetFr3,1049 chainNetFr3,1097 chainNetGalGal6,931 chainNetGalGal6,968 chainNetGalGal6,1029 chainNetGalGal6,1049 chainNetGalGal6,1097 chainNetGasAcu1,931 chainNetGasAcu1,968 chainNetGasAcu1,1029 chainNetGasAcu1,1049 chainNetGasAcu1,1097 chainNetHg19,931 chainNetHg19,968 chainNetHg19,1029 chainNetHg19,1049 chainNetHg19,1097 chainNetMm10,931 chainNetMm10,968 chainNetMm10,1029 chainNetMm10,1049 chainNetMm10,1097 chainNetOryLat2,937 chainNetOryLat2,974 chainNetOryLat2,1035 chainNetOryLat2,1055 chainNetOryLat2,1103 chainOryLat2,934 chainOryLat2,971 chainOryLat2,1032 chainOryLat2,1052 chainOryLat2,1100 netDanRer7,928 netDanRer7,965 netDanRer7,1026 netDanRer7,1046 netDanRer7,1094 netFr3,928 netFr3,965 netFr3,1026 netFr3,1046 netFr3,1094 netGalGal6,928 netGalGal6,965 netGalGal6,1026 netGalGal6,1046 netGalGal6,1094 netGasAcu1,928 netGasAcu1,965 netGasAcu1,1026 netGasAcu1,1046 netGasAcu1,1094 netHg19,928 netHg19,965 netHg19,1026 netHg19,1046 netHg19,1094 netMm10,928 netMm10,965 netMm10,1026 netMm10,1046 netMm10,1094 netOryLat2,934 netOryLat2,971 netOryLat2,1032 netOryLat2,1052 netOryLat2,1100 million gold,55 minexonintronprob augustusGene,135 minimum chainDanRer7,676 chainFr3,676 chainGalGal6,676 chainGasAcu1,676 chainHg19,676 chainMm10,676 chainNetDanRer7,679 chainNetFr3,679 chainNetGalGal6,679 chainNetGasAcu1,679 chainNetHg19,679 chainNetMm10,679 chainNetOryLat2,685 chainOryLat2,682 netDanRer7,676 netFr3,676 netGalGal6,676 netGasAcu1,676 netHg19,676 netMm10,676 netOryLat2,682 minmeanexonintronprob augustusGene,137 minmei chainDanRer7,920 chainFr3,920 chainGalGal6,920 chainGasAcu1,920 chainHg19,920 chainMm10,920 chainNetDanRer7,923 chainNetFr3,923 chainNetGalGal6,923 chainNetGasAcu1,923 chainNetHg19,923 chainNetMm10,923 chainNetOryLat2,929 chainOryLat2,926 netDanRer7,920 netFr3,920 netGalGal6,920 netGasAcu1,920 netHg19,920 netMm10,920 netOryLat2,926 misplacements uniprot,853 mit gold,298 mj xenoRefGene,334 mk_counts windowmaskerSdust,59 mm10 chainMm10,7 chainMm10,69 chainMm10,303 chainNetMm10,8 chainNetMm10,72 chainNetMm10,306 chainNetMm10Viewchain,6 chainNetMm10Viewnet,6 netMm10,7 netMm10,69 netMm10,303 mode chainDanRer7,381 chainFr3,381 chainGalGal6,381 chainGasAcu1,381 chainHg19,381 chainMm10,381 chainNetDanRer7,384 chainNetFr3,384 chainNetGalGal6,384 chainNetGasAcu1,384 chainNetHg19,384 chainNetMm10,384 chainNetOryLat2,390 chainOryLat2,387 gold,60 mrna,42 mrna,72 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 netDanRer7,381 netFr3,381 netGalGal6,381 netGasAcu1,381 netHg19,381 netMm10,381 netOryLat2,387 xenoMrna,46 xenoMrna,146 model augustusGene,121 augustusGene,326 gaze,17 gaze,38 gaze,67 genscan,140 model-based tRNAs,61 modeling genscan,182 models augustusGene,49 augustusGene,65 augustusGene,97 augustusGene,145 augustusGene,178 genscan,158 tRNAs,403 uniprot,733 modes chainDanRer7,238 chainFr3,238 chainGalGal6,238 chainGasAcu1,238 chainHg19,238 chainMm10,238 chainNetDanRer7,241 chainNetFr3,241 chainNetGalGal6,241 chainNetGasAcu1,241 chainNetHg19,241 chainNetMm10,241 chainNetOryLat2,245 chainOryLat2,242 netDanRer7,238 netFr3,238 netGalGal6,238 netGasAcu1,238 netHg19,238 netMm10,238 netOryLat2,242 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modifications unipModif,2 unipModif,6 uniprot,340 uniprot,574 modified uniprot,343 modsnp uniprot,2030 moiety-binding uniprot,347 mol blastHg18KG,169 cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 genscan,221 tRNAs,430 molecular genscan,199 molecule tRNAs,147 months uniprot,1573 more augustusGene,35 blastHg18KG,105 blastHg18KG,148 chainDanRer7,160 chainDanRer7,220 chainFr3,160 chainFr3,220 chainGalGal6,160 chainGalGal6,220 chainGasAcu1,160 chainGasAcu1,220 chainHg19,160 chainHg19,220 chainMm10,160 chainMm10,220 chainNetDanRer7,163 chainNetDanRer7,223 chainNetFr3,163 chainNetFr3,223 chainNetGalGal6,163 chainNetGalGal6,223 chainNetGasAcu1,163 chainNetGasAcu1,223 chainNetHg19,163 chainNetHg19,223 chainNetMm10,163 chainNetMm10,223 chainNetOryLat2,167 chainNetOryLat2,227 chainOryLat2,164 chainOryLat2,224 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 ensGene,18 ensGene,158 genscan,50 genscan,125 genscan,163 gold,220 microsat,96 mrna,47 mrna,119 mrna,215 mrna,336 nestedRepeats,211 nestedRepeats,300 netDanRer7,160 netDanRer7,220 netFr3,160 netFr3,220 netGalGal6,160 netGalGal6,220 netGasAcu1,160 netGasAcu1,220 netHg19,160 netHg19,220 netMm10,160 netMm10,220 netOryLat2,164 netOryLat2,224 simpleRepeat,57 transMapEnsemblV5,130 transMapEnsemblV5,147 transMapEnsemblV5,222 transMapEnsemblV5,267 transMapEnsemblV5,289 transMapEnsemblV5,565 transMapEstV5,99 transMapEstV5,116 transMapEstV5,191 transMapEstV5,236 transMapEstV5,258 transMapEstV5,534 transMapRefSeqV5,99 transMapRefSeqV5,116 transMapRefSeqV5,191 transMapRefSeqV5,236 transMapRefSeqV5,258 transMapRefSeqV5,534 transMapRnaV5,99 transMapRnaV5,116 transMapRnaV5,191 transMapRnaV5,236 transMapRnaV5,258 transMapRnaV5,534 transMapV5,62 transMapV5,106 transMapV5,163 transMapV5,205 transMapV5,222 transMapV5,297 transMapV5,342 transMapV5,364 transMapV5,640 uniprot,498 uniprot,691 uniprot,984 uniprot,1841 xenoMrna,51 xenoMrna,193 xenoMrna,289 xenoMrna,410 xenoRefGene,174 morgulis windowmaskerSdust,90 most augustusGene,93 augustusGene,110 nestedRepeats,249 transMapV5,92 uniprot,683 uniprot,756 uniprot,1295 uniprot,1391 mostly tRNAs,298 uniprot,1365 motif tRNAs,38 motifs uniprot,388 mouse chainDanRer7,1059 chainFr3,1059 chainGalGal6,1059 chainGasAcu1,1059 chainHg19,1059 chainMm10,1 chainMm10,3 chainMm10,65 chainMm10,96 chainMm10,148 chainMm10,266 chainMm10,291 chainMm10,572 chainMm10,620 chainMm10,1059 chainNetDanRer7,1062 chainNetFr3,1062 chainNetGalGal6,1062 chainNetGasAcu1,1062 chainNetHg19,1062 chainNetMm10,1 chainNetMm10,4 chainNetMm10,68 chainNetMm10,99 chainNetMm10,151 chainNetMm10,269 chainNetMm10,294 chainNetMm10,575 chainNetMm10,623 chainNetMm10,1062 chainNetMm10Viewchain,2 chainNetMm10Viewnet,2 chainNetOryLat2,1068 chainOryLat2,1065 gaze,47 gaze,53 netDanRer7,1059 netFr3,1059 netGalGal6,1059 netGasAcu1,1059 netHg19,1059 netMm10,1 netMm10,3 netMm10,65 netMm10,96 netMm10,148 netMm10,266 netMm10,291 netMm10,572 netMm10,620 netMm10,1059 netOryLat2,1065 transMapEnsemblV5,44 transMapEnsemblV5,364 transMapEstV5,333 transMapRefSeqV5,333 transMapRnaV5,333 transMapV5,439 uniprot,521 uniprot,535 mrna mrna,7 mrna,13 mrna,127 mrna,359 mrna,400 mrna,407 transMapEnsemblV5,455 transMapEstV5,424 transMapRefSeqV5,424 transMapRnaV5,18 transMapRnaV5,424 transMapV5,99 transMapV5,530 xenoMrna,7 xenoMrna,21 xenoMrna,201 xenoMrna,432 xenoMrna,469 xenoMrna,476 mrnas mrna,2 mrna,4 mrna,19 mrna,137 mrna,231 mrna,246 mrna,287 mrna,305 mrna,330 mrna,346 transMapEnsemblV5,172 transMapEstV5,141 transMapRefSeqV5,141 transMapRnaV5,141 transMapV5,110 transMapV5,247 xenoMrna,2 xenoMrna,4 xenoMrna,211 xenoMrna,305 xenoMrna,320 xenoMrna,361 xenoMrna,379 xenoMrna,404 xenoMrna,419 much chainDanRer7,877 chainDanRer7,894 chainFr3,877 chainFr3,894 chainGalGal6,877 chainGalGal6,894 chainGasAcu1,877 chainGasAcu1,894 chainHg19,877 chainHg19,894 chainMm10,877 chainMm10,894 chainNetDanRer7,880 chainNetDanRer7,897 chainNetFr3,880 chainNetFr3,897 chainNetGalGal6,880 chainNetGalGal6,897 chainNetGasAcu1,880 chainNetGasAcu1,897 chainNetHg19,880 chainNetHg19,897 chainNetMm10,880 chainNetMm10,897 chainNetOryLat2,886 chainNetOryLat2,903 chainOryLat2,883 chainOryLat2,900 nestedRepeats,210 netDanRer7,877 netDanRer7,894 netFr3,877 netFr3,894 netGalGal6,877 netGalGal6,894 netGasAcu1,877 netGasAcu1,894 netHg19,877 netHg19,894 netMm10,877 netMm10,894 netOryLat2,883 netOryLat2,900 mujica uniprot,1967 multiple chainDanRer7,192 chainFr3,192 chainGalGal6,192 chainGasAcu1,192 chainHg19,192 chainMm10,192 chainNetDanRer7,195 chainNetFr3,195 chainNetGalGal6,195 chainNetGasAcu1,195 chainNetHg19,195 chainNetMm10,195 chainNetOryLat2,199 chainOryLat2,196 mrna,362 netDanRer7,192 netFr3,192 netGalGal6,192 netGasAcu1,192 netHg19,192 netMm10,192 netOryLat2,196 transMapEnsemblV5,498 transMapEstV5,467 transMapRefSeqV5,467 transMapRnaV5,467 transMapV5,573 uniprot,58 uniprot,1067 uniprot,1095 xenoMrna,435 xenoRefGene,242 multistep tRNAs,492 mutagenesis uniprot,353 mutat uniprot,2044 mutated uniprot,618 mutation chainDanRer7,181 chainFr3,181 chainGalGal6,181 chainGasAcu1,181 chainHg19,181 chainMm10,181 chainNetDanRer7,184 chainNetFr3,184 chainNetGalGal6,184 chainNetGasAcu1,184 chainNetHg19,184 chainNetMm10,184 chainNetOryLat2,188 chainOryLat2,185 netDanRer7,181 netFr3,181 netGalGal6,181 netGasAcu1,181 netHg19,181 netMm10,181 netOryLat2,185 mutation-related uniprot,408 mutations unipMut,1 unipMut,5 uniprot,352 myers blastHg18KG,159 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 ensGene,115 ensGene,125 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 gap,181 n50 gold,202 gold,210 name chainDanRer7,363 chainFr3,363 chainGalGal6,363 chainGasAcu1,363 chainHg19,363 chainMm10,363 chainNetDanRer7,366 chainNetFr3,366 chainNetGalGal6,366 chainNetGasAcu1,366 chainNetHg19,366 chainNetMm10,366 chainNetOryLat2,372 chainOryLat2,369 mrna,145 nestedRepeats,136 netDanRer7,363 netFr3,363 netGalGal6,363 netGasAcu1,363 netHg19,363 netMm10,363 netOryLat2,369 uniprot,105 uniprot,461 uniprot,541 uniprot,1577 xenoMrna,219 xenoRefGene,107 xenoRefGene,117 xenoRefGene,122 names chainDanRer7,242 chainFr3,242 chainGalGal6,242 chainGasAcu1,242 chainHg19,242 chainMm10,242 chainNetDanRer7,245 chainNetFr3,245 chainNetGalGal6,245 chainNetGasAcu1,245 chainNetHg19,245 chainNetMm10,245 chainNetOryLat2,249 chainOryLat2,246 netDanRer7,242 netFr3,242 netGalGal6,242 netGasAcu1,242 netHg19,242 netMm10,242 netOryLat2,246 xenoRefGene,129 native augustusGene,295 transMapEnsemblV5,763 transMapEstV5,732 transMapRefSeqV5,732 transMapRnaV5,732 transMapV5,122 transMapV5,838 natl chainDanRer7,1064 chainFr3,1064 chainGalGal6,1064 chainGasAcu1,1064 chainHg19,1064 chainMm10,1064 chainNetDanRer7,1067 chainNetFr3,1067 chainNetGalGal6,1067 chainNetGasAcu1,1067 chainNetHg19,1067 chainNetMm10,1067 chainNetOryLat2,1073 chainOryLat2,1070 netDanRer7,1064 netFr3,1064 netGalGal6,1064 netGasAcu1,1064 netHg19,1064 netMm10,1064 netOryLat2,1070 natural chainDanRer7,815 chainFr3,815 chainGalGal6,815 chainGasAcu1,815 chainHg19,815 chainMm10,815 chainNetDanRer7,818 chainNetFr3,818 chainNetGalGal6,818 chainNetGasAcu1,818 chainNetHg19,818 chainNetMm10,818 chainNetOryLat2,824 chainOryLat2,821 netDanRer7,815 netFr3,815 netGalGal6,815 netGasAcu1,815 netHg19,815 netMm10,815 netOryLat2,821 naview tRNAs,348 nbci uniprot,822 nbsp chainDanRer7,666 chainFr3,666 chainGalGal6,666 chainGasAcu1,666 chainHg19,666 chainMm10,666 chainNetDanRer7,669 chainNetFr3,669 chainNetGalGal6,669 chainNetGasAcu1,669 chainNetHg19,669 chainNetMm10,669 chainNetOryLat2,675 chainOryLat2,672 netDanRer7,666 netFr3,666 netGalGal6,666 netGasAcu1,666 netHg19,666 netMm10,666 netOryLat2,672 ncbi blastHg18KG,143 uniprot,840 uniprot,856 uniprot,1024 uniprot,1046 uniprot,1049 uniprot,1079 uniprot,1204 uniprot,1274 uniprot,1280 uniprot,1289 uniprot,1299 windowmaskerSdust,29 windowmaskerSdust,43 xenoRefGene,27 xenoRefGene,296 xenoRefGene,365 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 near-best transMapEnsemblV5,355 transMapEstV5,324 transMapRefSeqV5,324 transMapRnaV5,324 transMapV5,430 necessary chainDanRer7,799 chainFr3,799 chainGalGal6,799 chainGasAcu1,799 chainHg19,799 chainMm10,799 chainNetDanRer7,802 chainNetFr3,802 chainNetGalGal6,802 chainNetGasAcu1,802 chainNetHg19,802 chainNetMm10,802 chainNetOryLat2,808 chainOryLat2,805 netDanRer7,799 netFr3,799 netGalGal6,799 netGasAcu1,799 netHg19,799 netMm10,799 netOryLat2,805 nematodes augustusGene,211 net chainDanRer7,34 chainDanRer7,258 chainDanRer7,261 chainDanRer7,376 chainDanRer7,753 chainFr3,34 chainFr3,258 chainFr3,261 chainFr3,376 chainFr3,753 chainGalGal6,34 chainGalGal6,258 chainGalGal6,261 chainGalGal6,376 chainGalGal6,753 chainGasAcu1,34 chainGasAcu1,258 chainGasAcu1,261 chainGasAcu1,376 chainGasAcu1,753 chainHg19,34 chainHg19,258 chainHg19,261 chainHg19,376 chainHg19,753 chainMm10,34 chainMm10,258 chainMm10,261 chainMm10,376 chainMm10,753 chainNetDanRer7,3 chainNetDanRer7,11 chainNetDanRer7,37 chainNetDanRer7,261 chainNetDanRer7,264 chainNetDanRer7,379 chainNetDanRer7,756 chainNetDanRer7Viewchain,9 chainNetDanRer7Viewnet,1 chainNetDanRer7Viewnet,9 chainNetFr3,3 chainNetFr3,11 chainNetFr3,37 chainNetFr3,261 chainNetFr3,264 chainNetFr3,379 chainNetFr3,756 chainNetFr3Viewchain,9 chainNetFr3Viewnet,1 chainNetFr3Viewnet,9 chainNetGalGal6,3 chainNetGalGal6,11 chainNetGalGal6,37 chainNetGalGal6,261 chainNetGalGal6,264 chainNetGalGal6,379 chainNetGalGal6,756 chainNetGalGal6Viewchain,9 chainNetGalGal6Viewnet,1 chainNetGalGal6Viewnet,9 chainNetGasAcu1,3 chainNetGasAcu1,11 chainNetGasAcu1,37 chainNetGasAcu1,261 chainNetGasAcu1,264 chainNetGasAcu1,379 chainNetGasAcu1,756 chainNetGasAcu1Viewchain,9 chainNetGasAcu1Viewnet,1 chainNetGasAcu1Viewnet,9 chainNetHg19,3 chainNetHg19,11 chainNetHg19,37 chainNetHg19,261 chainNetHg19,264 chainNetHg19,379 chainNetHg19,756 chainNetHg19Viewchain,9 chainNetHg19Viewnet,1 chainNetHg19Viewnet,9 chainNetMm10,3 chainNetMm10,11 chainNetMm10,37 chainNetMm10,261 chainNetMm10,264 chainNetMm10,379 chainNetMm10,756 chainNetMm10Viewchain,9 chainNetMm10Viewnet,1 chainNetMm10Viewnet,9 chainNetOryLat2,3 chainNetOryLat2,13 chainNetOryLat2,39 chainNetOryLat2,265 chainNetOryLat2,268 chainNetOryLat2,385 chainNetOryLat2,762 chainNetOryLat2Viewchain,11 chainNetOryLat2Viewnet,1 chainNetOryLat2Viewnet,11 chainOryLat2,36 chainOryLat2,262 chainOryLat2,265 chainOryLat2,382 chainOryLat2,759 netDanRer7,2 netDanRer7,9 netDanRer7,34 netDanRer7,258 netDanRer7,261 netDanRer7,376 netDanRer7,753 netFr3,2 netFr3,9 netFr3,34 netFr3,258 netFr3,261 netFr3,376 netFr3,753 netGalGal6,2 netGalGal6,9 netGalGal6,34 netGalGal6,258 netGalGal6,261 netGalGal6,376 netGalGal6,753 netGasAcu1,2 netGasAcu1,9 netGasAcu1,34 netGasAcu1,258 netGasAcu1,261 netGasAcu1,376 netGasAcu1,753 netHg19,2 netHg19,9 netHg19,34 netHg19,258 netHg19,261 netHg19,376 netHg19,753 netMm10,2 netMm10,9 netMm10,34 netMm10,258 netMm10,261 netMm10,376 netMm10,753 netOryLat2,2 netOryLat2,11 netOryLat2,36 netOryLat2,262 netOryLat2,265 netOryLat2,382 netOryLat2,759 transMapV5,139 netclass chainDanRer7,869 chainDanRer7,992 chainFr3,869 chainFr3,992 chainGalGal6,869 chainGalGal6,992 chainGasAcu1,869 chainGasAcu1,992 chainHg19,869 chainHg19,992 chainMm10,869 chainMm10,992 chainNetDanRer7,872 chainNetDanRer7,995 chainNetFr3,872 chainNetFr3,995 chainNetGalGal6,872 chainNetGalGal6,995 chainNetGasAcu1,872 chainNetGasAcu1,995 chainNetHg19,872 chainNetHg19,995 chainNetMm10,872 chainNetMm10,995 chainNetOryLat2,878 chainNetOryLat2,1001 chainOryLat2,875 chainOryLat2,998 netDanRer7,869 netDanRer7,992 netFr3,869 netFr3,992 netGalGal6,869 netGalGal6,992 netGasAcu1,869 netGasAcu1,992 netHg19,869 netHg19,992 netMm10,869 netMm10,992 netOryLat2,875 netOryLat2,998 netfilter transMapEnsemblV5,252 transMapEstV5,221 transMapRefSeqV5,221 transMapRnaV5,221 transMapV5,327 nets chainDanRer7,979 chainFr3,979 chainGalGal6,979 chainGasAcu1,979 chainHg19,979 chainMm10,979 chainNetDanRer7,982 chainNetFr3,982 chainNetGalGal6,982 chainNetGasAcu1,982 chainNetHg19,982 chainNetMm10,982 chainNetOryLat2,988 chainOryLat2,985 netDanRer7,979 netFr3,979 netGalGal6,979 netGasAcu1,979 netHg19,979 netMm10,979 netOryLat2,985 transMapEnsemblV5,199 transMapEnsemblV5,241 transMapEnsemblV5,247 transMapEnsemblV5,261 transMapEstV5,168 transMapEstV5,210 transMapEstV5,216 transMapEstV5,230 transMapRefSeqV5,168 transMapRefSeqV5,210 transMapRefSeqV5,216 transMapRefSeqV5,230 transMapRnaV5,168 transMapRnaV5,210 transMapRnaV5,216 transMapRnaV5,230 transMapV5,88 transMapV5,274 transMapV5,316 transMapV5,322 transMapV5,336 netsyntenic chainDanRer7,837 chainDanRer7,990 chainFr3,837 chainFr3,990 chainGalGal6,837 chainGalGal6,990 chainGasAcu1,837 chainGasAcu1,990 chainHg19,837 chainHg19,990 chainMm10,837 chainMm10,990 chainNetDanRer7,840 chainNetDanRer7,993 chainNetFr3,840 chainNetFr3,993 chainNetGalGal6,840 chainNetGalGal6,993 chainNetGasAcu1,840 chainNetGasAcu1,993 chainNetHg19,840 chainNetHg19,993 chainNetMm10,840 chainNetMm10,993 chainNetOryLat2,846 chainNetOryLat2,999 chainOryLat2,843 chainOryLat2,996 netDanRer7,837 netDanRer7,990 netFr3,837 netFr3,990 netGalGal6,837 netGalGal6,990 netGasAcu1,837 netGasAcu1,990 netHg19,837 netHg19,990 netMm10,837 netMm10,990 netOryLat2,843 netOryLat2,996 new augustusGene,329 tRNAs,482 newer nestedRepeats,270 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next blastHg18KG,60 chainDanRer7,342 chainDanRer7,371 chainFr3,342 chainFr3,371 chainGalGal6,342 chainGalGal6,371 chainGasAcu1,342 chainGasAcu1,371 chainHg19,342 chainHg19,371 chainMm10,342 chainMm10,371 chainNetDanRer7,345 chainNetDanRer7,374 chainNetFr3,345 chainNetFr3,374 chainNetGalGal6,345 chainNetGalGal6,374 chainNetGasAcu1,345 chainNetGasAcu1,374 chainNetHg19,345 chainNetHg19,374 chainNetMm10,345 chainNetMm10,374 chainNetOryLat2,351 chainNetOryLat2,380 chainOryLat2,348 chainOryLat2,377 netDanRer7,342 netDanRer7,371 netFr3,342 netFr3,371 netGalGal6,342 netGalGal6,371 netGasAcu1,342 netGasAcu1,371 netHg19,342 netHg19,371 netMm10,342 netMm10,371 netOryLat2,348 netOryLat2,377 nig augustusGene,270 chainNetOryLat2,7 chainNetOryLat2,73 chainNetOryLat2,309 chainNetOryLat2Viewchain,5 chainNetOryLat2Viewnet,5 chainOryLat2,6 chainOryLat2,70 chainOryLat2,306 netOryLat2,6 netOryLat2,70 netOryLat2,306 nigroviridis gold,14 no blastHg18KG,95 microsat,73 tRNAs,191 transMapEnsemblV5,221 transMapEstV5,190 transMapRefSeqV5,190 transMapRnaV5,190 transMapV5,296 uniprot,1031 uniprot,1078 uniprot,1262 uniprot,1324 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non-alignable chainDanRer7,49 chainFr3,49 chainGalGal6,49 chainGasAcu1,49 chainHg19,49 chainMm10,49 chainNetDanRer7,52 chainNetFr3,52 chainNetGalGal6,52 chainNetGasAcu1,52 chainNetHg19,52 chainNetMm10,52 chainNetOryLat2,54 chainOryLat2,51 netDanRer7,49 netFr3,49 netGalGal6,49 netGasAcu1,49 netHg19,49 netMm10,49 netOryLat2,51 non-coding augustusGene,75 xenoRefGene,191 non-protein-coding xenoRefGene,17 xenoRefGene,199 non-redundant xenoRefGene,371 non-tetraodon xenoMrna,3 xenoRefGene,3 nonsyn chainDanRer7,548 chainFr3,548 chainGalGal6,548 chainGasAcu1,548 chainHg19,548 chainMm10,548 chainNetDanRer7,551 chainNetFr3,551 chainNetGalGal6,551 chainNetGasAcu1,551 chainNetHg19,551 chainNetMm10,551 chainNetOryLat2,557 chainOryLat2,554 netDanRer7,548 netFr3,548 netGalGal6,548 netGasAcu1,548 netHg19,548 netMm10,548 netOryLat2,554 nor tRNAs,265 xenoMrna,124 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not chainDanRer7,804 chainFr3,804 chainGalGal6,804 chainGasAcu1,804 chainHg19,804 chainMm10,804 chainNetDanRer7,807 chainNetFr3,807 chainNetGalGal6,807 chainNetGasAcu1,807 chainNetHg19,807 chainNetMm10,807 chainNetOryLat2,813 chainOryLat2,810 cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 gap,187 gold,149 mrna,285 netDanRer7,804 netFr3,804 netGalGal6,804 netGasAcu1,804 netHg19,804 netMm10,804 netOryLat2,810 tRNAs,136 tRNAs,153 tRNAs,213 tRNAs,263 tRNAs,306 transMapEnsemblV5,62 uniprot,169 uniprot,627 uniprot,959 uniprot,1130 uniprot,1455 xenoMrna,120 xenoMrna,359 note nestedRepeats,264 tRNAs,283 transMapEnsemblV5,496 transMapEstV5,465 transMapRefSeqV5,465 transMapRnaV5,465 transMapV5,571 uniprot,695 novel transMapEnsemblV5,737 transMapEstV5,706 transMapRefSeqV5,706 transMapRnaV5,706 transMapV5,812 novo augustusGene,304 transMapEnsemblV5,772 transMapEstV5,741 transMapRefSeqV5,741 transMapRnaV5,741 transMapV5,847 now uniprot,1680 ns chainDanRer7,884 chainFr3,884 chainGalGal6,884 chainGasAcu1,884 chainHg19,884 chainMm10,884 chainNetDanRer7,887 chainNetFr3,887 chainNetGalGal6,887 chainNetGasAcu1,887 chainNetHg19,887 chainNetMm10,887 chainNetOryLat2,893 chainOryLat2,890 gap,121 gap,151 gap,173 netDanRer7,884 netFr3,884 netGalGal6,884 netGasAcu1,884 netHg19,884 netMm10,884 netOryLat2,890 nucleic ensGene,195 microsat,125 mrna,433 simpleRepeat,85 tRNAs,381 tRNAs,404 tRNAs,457 tRNAs,500 uniprot,1997 xenoMrna,502 xenoRefGene,346 xenoRefGene,379 nucleotide cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 number augustusGene,153 cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 gold,265 transMapEnsemblV5,424 transMapEnsemblV5,547 transMapEstV5,393 transMapEstV5,516 transMapRefSeqV5,393 transMapRefSeqV5,516 transMapRnaV5,393 transMapRnaV5,516 transMapV5,499 transMapV5,622 numbers gap,119 o xenoRefGene,328 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 uniprot,1114 obtain tRNAs,45 tRNAs,67 transMapEnsemblV5,649 transMapEstV5,618 transMapRefSeqV5,618 transMapRnaV5,618 transMapV5,724 uniprot,1803 obtained augustusGene,126 cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 transMapEnsemblV5,156 transMapEnsemblV5,609 transMapEstV5,125 transMapEstV5,578 transMapRefSeqV5,125 transMapRefSeqV5,578 transMapRnaV5,125 transMapRnaV5,578 transMapV5,231 transMapV5,684 uniprot,1506 uniprot,1695 occur simpleRepeat,36 oct augustusGene,334 blastHg18KG,172 chainFr3,4 chainFr3,66 chainFr3,300 chainNetFr3,5 chainNetFr3,69 chainNetFr3,303 chainNetFr3Viewchain,3 chainNetFr3Viewnet,3 chainNetOryLat2,5 chainNetOryLat2,71 chainNetOryLat2,307 chainNetOryLat2Viewchain,3 chainNetOryLat2Viewnet,3 chainOryLat2,4 chainOryLat2,68 chainOryLat2,304 netFr3,4 netFr3,66 netFr3,300 netOryLat2,4 netOryLat2,68 netOryLat2,304 of augustusGene,72 augustusGene,84 augustusGene,92 augustusGene,94 augustusGene,154 augustusGene,195 augustusGene,236 blastHg18KG,19 blastHg18KG,108 blastHg18KG,120 blastHg18KG,128 blastHg18KG,141 chainDanRer7,17 chainDanRer7,64 chainDanRer7,179 chainDanRer7,199 chainDanRer7,251 chainDanRer7,272 chainDanRer7,354 chainDanRer7,364 chainDanRer7,482 chainDanRer7,502 chainDanRer7,635 chainDanRer7,640 chainDanRer7,658 chainDanRer7,678 chainDanRer7,878 chainDanRer7,953 chainDanRer7,975 chainDanRer7,999 chainDanRer7,1013 chainFr3,17 chainFr3,64 chainFr3,179 chainFr3,199 chainFr3,251 chainFr3,272 chainFr3,354 chainFr3,364 chainFr3,482 chainFr3,502 chainFr3,635 chainFr3,640 chainFr3,658 chainFr3,678 chainFr3,878 chainFr3,953 chainFr3,975 chainFr3,999 chainFr3,1013 chainGalGal6,17 chainGalGal6,64 chainGalGal6,179 chainGalGal6,199 chainGalGal6,251 chainGalGal6,272 chainGalGal6,354 chainGalGal6,364 chainGalGal6,482 chainGalGal6,502 chainGalGal6,635 chainGalGal6,640 chainGalGal6,658 chainGalGal6,678 chainGalGal6,878 chainGalGal6,953 chainGalGal6,975 chainGalGal6,999 chainGalGal6,1013 chainGasAcu1,17 chainGasAcu1,64 chainGasAcu1,179 chainGasAcu1,199 chainGasAcu1,251 chainGasAcu1,272 chainGasAcu1,354 chainGasAcu1,364 chainGasAcu1,482 chainGasAcu1,502 chainGasAcu1,635 chainGasAcu1,640 chainGasAcu1,658 chainGasAcu1,678 chainGasAcu1,878 chainGasAcu1,953 chainGasAcu1,975 chainGasAcu1,999 chainGasAcu1,1013 chainHg19,17 chainHg19,64 chainHg19,179 chainHg19,199 chainHg19,251 chainHg19,272 chainHg19,354 chainHg19,364 chainHg19,482 chainHg19,502 chainHg19,635 chainHg19,640 chainHg19,658 chainHg19,678 chainHg19,878 chainHg19,953 chainHg19,975 chainHg19,999 chainHg19,1013 chainMm10,17 chainMm10,64 chainMm10,179 chainMm10,199 chainMm10,251 chainMm10,272 chainMm10,354 chainMm10,364 chainMm10,482 chainMm10,502 chainMm10,635 chainMm10,640 chainMm10,658 chainMm10,678 chainMm10,878 chainMm10,953 chainMm10,975 chainMm10,999 chainMm10,1013 chainNetDanRer7,20 chainNetDanRer7,67 chainNetDanRer7,182 chainNetDanRer7,202 chainNetDanRer7,254 chainNetDanRer7,275 chainNetDanRer7,357 chainNetDanRer7,367 chainNetDanRer7,485 chainNetDanRer7,505 chainNetDanRer7,638 chainNetDanRer7,643 chainNetDanRer7,661 chainNetDanRer7,681 chainNetDanRer7,881 chainNetDanRer7,956 chainNetDanRer7,978 chainNetDanRer7,1002 chainNetDanRer7,1016 chainNetFr3,20 chainNetFr3,67 chainNetFr3,182 chainNetFr3,202 chainNetFr3,254 chainNetFr3,275 chainNetFr3,357 chainNetFr3,367 chainNetFr3,485 chainNetFr3,505 chainNetFr3,638 chainNetFr3,643 chainNetFr3,661 chainNetFr3,681 chainNetFr3,881 chainNetFr3,956 chainNetFr3,978 chainNetFr3,1002 chainNetFr3,1016 chainNetGalGal6,20 chainNetGalGal6,67 chainNetGalGal6,182 chainNetGalGal6,202 chainNetGalGal6,254 chainNetGalGal6,275 chainNetGalGal6,357 chainNetGalGal6,367 chainNetGalGal6,485 chainNetGalGal6,505 chainNetGalGal6,638 chainNetGalGal6,643 chainNetGalGal6,661 chainNetGalGal6,681 chainNetGalGal6,881 chainNetGalGal6,956 chainNetGalGal6,978 chainNetGalGal6,1002 chainNetGalGal6,1016 chainNetGasAcu1,20 chainNetGasAcu1,67 chainNetGasAcu1,182 chainNetGasAcu1,202 chainNetGasAcu1,254 chainNetGasAcu1,275 chainNetGasAcu1,357 chainNetGasAcu1,367 chainNetGasAcu1,485 chainNetGasAcu1,505 chainNetGasAcu1,638 chainNetGasAcu1,643 chainNetGasAcu1,661 chainNetGasAcu1,681 chainNetGasAcu1,881 chainNetGasAcu1,956 chainNetGasAcu1,978 chainNetGasAcu1,1002 chainNetGasAcu1,1016 chainNetHg19,20 chainNetHg19,67 chainNetHg19,182 chainNetHg19,202 chainNetHg19,254 chainNetHg19,275 chainNetHg19,357 chainNetHg19,367 chainNetHg19,485 chainNetHg19,505 chainNetHg19,638 chainNetHg19,643 chainNetHg19,661 chainNetHg19,681 chainNetHg19,881 chainNetHg19,956 chainNetHg19,978 chainNetHg19,1002 chainNetHg19,1016 chainNetMm10,20 chainNetMm10,67 chainNetMm10,182 chainNetMm10,202 chainNetMm10,254 chainNetMm10,275 chainNetMm10,357 chainNetMm10,367 chainNetMm10,485 chainNetMm10,505 chainNetMm10,638 chainNetMm10,643 chainNetMm10,661 chainNetMm10,681 chainNetMm10,881 chainNetMm10,956 chainNetMm10,978 chainNetMm10,1002 chainNetMm10,1016 chainNetOryLat2,22 chainNetOryLat2,69 chainNetOryLat2,186 chainNetOryLat2,206 chainNetOryLat2,258 chainNetOryLat2,279 chainNetOryLat2,363 chainNetOryLat2,373 chainNetOryLat2,491 chainNetOryLat2,511 chainNetOryLat2,644 chainNetOryLat2,649 chainNetOryLat2,667 chainNetOryLat2,687 chainNetOryLat2,887 chainNetOryLat2,962 chainNetOryLat2,984 chainNetOryLat2,1008 chainNetOryLat2,1022 chainOryLat2,19 chainOryLat2,66 chainOryLat2,183 chainOryLat2,203 chainOryLat2,255 chainOryLat2,276 chainOryLat2,360 chainOryLat2,370 chainOryLat2,488 chainOryLat2,508 chainOryLat2,641 chainOryLat2,646 chainOryLat2,664 chainOryLat2,684 chainOryLat2,884 chainOryLat2,959 chainOryLat2,981 chainOryLat2,1005 chainOryLat2,1019 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 ensGene,33 ensGene,134 gap,30 gap,36 gap,70 gap,80 gap,91 gap,100 gap,120 gap,194 gaze,61 gaze,86 gc5Base,19 gc5Base,46 gc5Base,52 gc5Base,67 gc5Base,76 genscan,43 genscan,110 genscan,134 genscan,212 gold,30 gold,46 gold,86 gold,113 gold,155 gold,167 gold,192 gold,223 gold,245 gold,268 gold,276 gold,297 microsat,27 microsat,55 microsat,64 microsat,81 mrna,52 mrna,81 mrna,120 mrna,146 mrna,157 mrna,193 mrna,251 mrna,382 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 netDanRer7,17 netDanRer7,64 netDanRer7,179 netDanRer7,199 netDanRer7,251 netDanRer7,272 netDanRer7,354 netDanRer7,364 netDanRer7,482 netDanRer7,502 netDanRer7,635 netDanRer7,640 netDanRer7,658 netDanRer7,678 netDanRer7,878 netDanRer7,953 netDanRer7,975 netDanRer7,999 netDanRer7,1013 netFr3,17 netFr3,64 netFr3,179 netFr3,199 netFr3,251 netFr3,272 netFr3,354 netFr3,364 netFr3,482 netFr3,502 netFr3,635 netFr3,640 netFr3,658 netFr3,678 netFr3,878 netFr3,953 netFr3,975 netFr3,999 netFr3,1013 netGalGal6,17 netGalGal6,64 netGalGal6,179 netGalGal6,199 netGalGal6,251 netGalGal6,272 netGalGal6,354 netGalGal6,364 netGalGal6,482 netGalGal6,502 netGalGal6,635 netGalGal6,640 netGalGal6,658 netGalGal6,678 netGalGal6,878 netGalGal6,953 netGalGal6,975 netGalGal6,999 netGalGal6,1013 netGasAcu1,17 netGasAcu1,64 netGasAcu1,179 netGasAcu1,199 netGasAcu1,251 netGasAcu1,272 netGasAcu1,354 netGasAcu1,364 netGasAcu1,482 netGasAcu1,502 netGasAcu1,635 netGasAcu1,640 netGasAcu1,658 netGasAcu1,678 netGasAcu1,878 netGasAcu1,953 netGasAcu1,975 netGasAcu1,999 netGasAcu1,1013 netHg19,17 netHg19,64 netHg19,179 netHg19,199 netHg19,251 netHg19,272 netHg19,354 netHg19,364 netHg19,482 netHg19,502 netHg19,635 netHg19,640 netHg19,658 netHg19,678 netHg19,878 netHg19,953 netHg19,975 netHg19,999 netHg19,1013 netMm10,17 netMm10,64 netMm10,179 netMm10,199 netMm10,251 netMm10,272 netMm10,354 netMm10,364 netMm10,482 netMm10,502 netMm10,635 netMm10,640 netMm10,658 netMm10,678 netMm10,878 netMm10,953 netMm10,975 netMm10,999 netMm10,1013 netOryLat2,19 netOryLat2,66 netOryLat2,183 netOryLat2,203 netOryLat2,255 netOryLat2,276 netOryLat2,360 netOryLat2,370 netOryLat2,488 netOryLat2,508 netOryLat2,641 netOryLat2,646 netOryLat2,664 netOryLat2,684 netOryLat2,884 netOryLat2,959 netOryLat2,981 netOryLat2,1005 netOryLat2,1019 simpleRepeat,40 tRNAs,49 tRNAs,72 tRNAs,82 tRNAs,90 tRNAs,164 tRNAs,232 tRNAs,245 tRNAs,273 tRNAs,320 tRNAs,358 tRNAs,373 tRNAs,450 tRNAs,481 tRNAs,496 transMapEnsemblV5,85 transMapEnsemblV5,139 transMapEnsemblV5,168 transMapEnsemblV5,207 transMapEnsemblV5,273 transMapEnsemblV5,280 transMapEnsemblV5,296 transMapEnsemblV5,308 transMapEnsemblV5,321 transMapEnsemblV5,338 transMapEnsemblV5,357 transMapEnsemblV5,375 transMapEnsemblV5,454 transMapEnsemblV5,505 transMapEnsemblV5,548 transMapEnsemblV5,736 transMapEnsemblV5,801 transMapEstV5,54 transMapEstV5,108 transMapEstV5,137 transMapEstV5,176 transMapEstV5,242 transMapEstV5,249 transMapEstV5,265 transMapEstV5,277 transMapEstV5,290 transMapEstV5,307 transMapEstV5,326 transMapEstV5,344 transMapEstV5,423 transMapEstV5,474 transMapEstV5,517 transMapEstV5,705 transMapEstV5,770 transMapRefSeqV5,54 transMapRefSeqV5,108 transMapRefSeqV5,137 transMapRefSeqV5,176 transMapRefSeqV5,242 transMapRefSeqV5,249 transMapRefSeqV5,265 transMapRefSeqV5,277 transMapRefSeqV5,290 transMapRefSeqV5,307 transMapRefSeqV5,326 transMapRefSeqV5,344 transMapRefSeqV5,423 transMapRefSeqV5,474 transMapRefSeqV5,517 transMapRefSeqV5,705 transMapRefSeqV5,770 transMapRnaV5,54 transMapRnaV5,108 transMapRnaV5,137 transMapRnaV5,176 transMapRnaV5,242 transMapRnaV5,249 transMapRnaV5,265 transMapRnaV5,277 transMapRnaV5,290 transMapRnaV5,307 transMapRnaV5,326 transMapRnaV5,344 transMapRnaV5,423 transMapRnaV5,474 transMapRnaV5,517 transMapRnaV5,705 transMapRnaV5,770 transMapV5,55 transMapV5,214 transMapV5,243 transMapV5,282 transMapV5,348 transMapV5,355 transMapV5,371 transMapV5,383 transMapV5,396 transMapV5,413 transMapV5,432 transMapV5,450 transMapV5,529 transMapV5,580 transMapV5,623 transMapV5,811 transMapV5,876 unipAliSwissprot,5 unipAliTrembl,5 unipInterest,4 uniprot,83 uniprot,269 uniprot,298 uniprot,310 uniprot,385 uniprot,407 uniprot,420 uniprot,452 uniprot,465 uniprot,542 uniprot,561 uniprot,652 uniprot,677 uniprot,877 uniprot,902 uniprot,980 uniprot,1111 uniprot,1125 uniprot,1159 uniprot,1166 uniprot,1181 uniprot,1288 uniprot,1298 uniprot,1306 uniprot,1315 uniprot,1347 uniprot,1360 uniprot,1363 uniprot,1397 uniprot,1436 uniprot,1457 uniprot,1590 uniprot,1594 uniprot,1639 uniprot,1646 uniprot,1656 uniprot,1666 uniprot,1684 uniprot,1687 uniprot,1710 uniprot,1951 xenoMrna,17 xenoMrna,56 xenoMrna,74 xenoMrna,96 xenoMrna,106 xenoMrna,155 xenoMrna,194 xenoMrna,220 xenoMrna,231 xenoMrna,267 xenoMrna,325 xenoMrna,456 xenoRefGene,61 xenoRefGene,80 xenoRefGene,94 xenoRefGene,119 xenoRefGene,230 xenoRefGene,262 xenoRefGene,374 off chainDanRer7,333 chainDanRer7,339 chainFr3,333 chainFr3,339 chainGalGal6,333 chainGalGal6,339 chainGasAcu1,333 chainGasAcu1,339 chainHg19,333 chainHg19,339 chainMm10,333 chainMm10,339 chainNetDanRer7,336 chainNetDanRer7,342 chainNetFr3,336 chainNetFr3,342 chainNetGalGal6,336 chainNetGalGal6,342 chainNetGasAcu1,336 chainNetGasAcu1,342 chainNetHg19,336 chainNetHg19,342 chainNetMm10,336 chainNetMm10,342 chainNetOryLat2,342 chainNetOryLat2,348 chainOryLat2,339 chainOryLat2,345 netDanRer7,333 netDanRer7,339 netFr3,333 netFr3,339 netGalGal6,333 netGalGal6,339 netGasAcu1,333 netGasAcu1,339 netHg19,333 netHg19,339 netMm10,333 netMm10,339 netOryLat2,339 netOryLat2,345 xenoRefGene,132 offers genscan,79 often chainDanRer7,209 chainDanRer7,221 chainFr3,209 chainFr3,221 chainGalGal6,209 chainGalGal6,221 chainGasAcu1,209 chainGasAcu1,221 chainHg19,209 chainHg19,221 chainMm10,209 chainMm10,221 chainNetDanRer7,212 chainNetDanRer7,224 chainNetFr3,212 chainNetFr3,224 chainNetGalGal6,212 chainNetGalGal6,224 chainNetGasAcu1,212 chainNetGasAcu1,224 chainNetHg19,212 chainNetHg19,224 chainNetMm10,212 chainNetMm10,224 chainNetOryLat2,216 chainNetOryLat2,228 chainOryLat2,213 chainOryLat2,225 netDanRer7,209 netDanRer7,221 netFr3,209 netFr3,221 netGalGal6,209 netGalGal6,221 netGasAcu1,209 netGasAcu1,221 netHg19,209 netHg19,221 netMm10,209 netMm10,221 netOryLat2,213 netOryLat2,225 older uniprot,1560 uniprot,1647 omitted nestedRepeats,165 on augustusGene,29 augustusGene,37 augustusGene,151 blastHg18KG,150 chainDanRer7,321 chainDanRer7,347 chainDanRer7,450 chainDanRer7,464 chainDanRer7,514 chainDanRer7,519 chainDanRer7,534 chainDanRer7,765 chainFr3,321 chainFr3,347 chainFr3,450 chainFr3,464 chainFr3,514 chainFr3,519 chainFr3,534 chainFr3,765 chainGalGal6,321 chainGalGal6,347 chainGalGal6,450 chainGalGal6,464 chainGalGal6,514 chainGalGal6,519 chainGalGal6,534 chainGalGal6,765 chainGasAcu1,321 chainGasAcu1,347 chainGasAcu1,450 chainGasAcu1,464 chainGasAcu1,514 chainGasAcu1,519 chainGasAcu1,534 chainGasAcu1,765 chainHg19,321 chainHg19,347 chainHg19,450 chainHg19,464 chainHg19,514 chainHg19,519 chainHg19,534 chainHg19,765 chainMm10,321 chainMm10,347 chainMm10,450 chainMm10,464 chainMm10,514 chainMm10,519 chainMm10,534 chainMm10,765 chainNetDanRer7,324 chainNetDanRer7,350 chainNetDanRer7,453 chainNetDanRer7,467 chainNetDanRer7,517 chainNetDanRer7,522 chainNetDanRer7,537 chainNetDanRer7,768 chainNetFr3,324 chainNetFr3,350 chainNetFr3,453 chainNetFr3,467 chainNetFr3,517 chainNetFr3,522 chainNetFr3,537 chainNetFr3,768 chainNetGalGal6,324 chainNetGalGal6,350 chainNetGalGal6,453 chainNetGalGal6,467 chainNetGalGal6,517 chainNetGalGal6,522 chainNetGalGal6,537 chainNetGalGal6,768 chainNetGasAcu1,324 chainNetGasAcu1,350 chainNetGasAcu1,453 chainNetGasAcu1,467 chainNetGasAcu1,517 chainNetGasAcu1,522 chainNetGasAcu1,537 chainNetGasAcu1,768 chainNetHg19,324 chainNetHg19,350 chainNetHg19,453 chainNetHg19,467 chainNetHg19,517 chainNetHg19,522 chainNetHg19,537 chainNetHg19,768 chainNetMm10,324 chainNetMm10,350 chainNetMm10,453 chainNetMm10,467 chainNetMm10,517 chainNetMm10,522 chainNetMm10,537 chainNetMm10,768 chainNetOryLat2,330 chainNetOryLat2,356 chainNetOryLat2,459 chainNetOryLat2,473 chainNetOryLat2,523 chainNetOryLat2,528 chainNetOryLat2,543 chainNetOryLat2,774 chainOryLat2,327 chainOryLat2,353 chainOryLat2,456 chainOryLat2,470 chainOryLat2,520 chainOryLat2,525 chainOryLat2,540 chainOryLat2,771 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 ensGene,20 ensGene,118 ensGene,123 ensGene,129 ensGene,140 gap,33 gaze,106 genscan,27 genscan,52 mrna,176 mrna,214 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 netDanRer7,321 netDanRer7,347 netDanRer7,450 netDanRer7,464 netDanRer7,514 netDanRer7,519 netDanRer7,534 netDanRer7,765 netFr3,321 netFr3,347 netFr3,450 netFr3,464 netFr3,514 netFr3,519 netFr3,534 netFr3,765 netGalGal6,321 netGalGal6,347 netGalGal6,450 netGalGal6,464 netGalGal6,514 netGalGal6,519 netGalGal6,534 netGalGal6,765 netGasAcu1,321 netGasAcu1,347 netGasAcu1,450 netGasAcu1,464 netGasAcu1,514 netGasAcu1,519 netGasAcu1,534 netGasAcu1,765 netHg19,321 netHg19,347 netHg19,450 netHg19,464 netHg19,514 netHg19,519 netHg19,534 netHg19,765 netMm10,321 netMm10,347 netMm10,450 netMm10,464 netMm10,514 netMm10,519 netMm10,534 netMm10,765 netOryLat2,327 netOryLat2,353 netOryLat2,456 netOryLat2,470 netOryLat2,520 netOryLat2,525 netOryLat2,540 netOryLat2,771 tRNAs,269 transMapEnsemblV5,567 transMapEnsemblV5,804 transMapEstV5,536 transMapEstV5,773 transMapRefSeqV5,536 transMapRefSeqV5,773 transMapRnaV5,536 transMapRnaV5,773 transMapV5,102 transMapV5,642 transMapV5,879 uniprot,19 uniprot,61 uniprot,129 uniprot,172 uniprot,232 uniprot,443 uniprot,482 uniprot,648 uniprot,728 uniprot,772 uniprot,809 uniprot,859 uniprot,1035 uniprot,1139 uniprot,1176 uniprot,1366 uniprot,1446 uniprot,1534 uniprot,1558 uniprot,1567 uniprot,1581 uniprot,1605 uniprot,1887 uniprot,2039 xenoMrna,250 xenoMrna,288 xenoRefGene,342 once uniprot,647 one augustusGene,169 chainDanRer7,187 chainDanRer7,355 chainDanRer7,501 chainDanRer7,792 chainDanRer7,888 chainFr3,187 chainFr3,355 chainFr3,501 chainFr3,792 chainFr3,888 chainGalGal6,187 chainGalGal6,355 chainGalGal6,501 chainGalGal6,792 chainGalGal6,888 chainGasAcu1,187 chainGasAcu1,355 chainGasAcu1,501 chainGasAcu1,792 chainGasAcu1,888 chainHg19,187 chainHg19,355 chainHg19,501 chainHg19,792 chainHg19,888 chainMm10,187 chainMm10,355 chainMm10,501 chainMm10,792 chainMm10,888 chainNetDanRer7,190 chainNetDanRer7,358 chainNetDanRer7,504 chainNetDanRer7,795 chainNetDanRer7,891 chainNetFr3,190 chainNetFr3,358 chainNetFr3,504 chainNetFr3,795 chainNetFr3,891 chainNetGalGal6,190 chainNetGalGal6,358 chainNetGalGal6,504 chainNetGalGal6,795 chainNetGalGal6,891 chainNetGasAcu1,190 chainNetGasAcu1,358 chainNetGasAcu1,504 chainNetGasAcu1,795 chainNetGasAcu1,891 chainNetHg19,190 chainNetHg19,358 chainNetHg19,504 chainNetHg19,795 chainNetHg19,891 chainNetMm10,190 chainNetMm10,358 chainNetMm10,504 chainNetMm10,795 chainNetMm10,891 chainNetOryLat2,194 chainNetOryLat2,364 chainNetOryLat2,510 chainNetOryLat2,801 chainNetOryLat2,897 chainOryLat2,191 chainOryLat2,361 chainOryLat2,507 chainOryLat2,798 chainOryLat2,894 cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 mrna,117 mrna,217 mrna,250 netDanRer7,187 netDanRer7,355 netDanRer7,501 netDanRer7,792 netDanRer7,888 netFr3,187 netFr3,355 netFr3,501 netFr3,792 netFr3,888 netGalGal6,187 netGalGal6,355 netGalGal6,501 netGalGal6,792 netGalGal6,888 netGasAcu1,187 netGasAcu1,355 netGasAcu1,501 netGasAcu1,792 netGasAcu1,888 netHg19,187 netHg19,355 netHg19,501 netHg19,792 netHg19,888 netMm10,187 netMm10,355 netMm10,501 netMm10,792 netMm10,888 netOryLat2,191 netOryLat2,361 netOryLat2,507 netOryLat2,798 netOryLat2,894 transMapV5,77 uniprot,74 uniprot,77 uniprot,155 uniprot,981 uniprot,1098 uniprot,1638 xenoMrna,191 xenoMrna,291 xenoMrna,324 ones transMapEnsemblV5,50 uniprot,1041 ongoing uniprot,1569 only chainDanRer7,351 chainFr3,351 chainGalGal6,351 chainGasAcu1,351 chainHg19,351 chainMm10,351 chainNetDanRer7,354 chainNetFr3,354 chainNetGalGal6,354 chainNetGasAcu1,354 chainNetHg19,354 chainNetMm10,354 chainNetOryLat2,360 chainOryLat2,357 cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 microsat,61 mrna,101 mrna,230 mrna,303 mrna,373 netDanRer7,351 netFr3,351 netGalGal6,351 netGasAcu1,351 netHg19,351 netMm10,351 netOryLat2,357 transMapEnsemblV5,49 transMapEnsemblV5,650 transMapEstV5,619 transMapRefSeqV5,619 transMapRnaV5,619 transMapV5,725 uniprot,645 uniprot,975 uniprot,1178 uniprot,1302 uniprot,1804 xenoMrna,175 xenoMrna,304 xenoMrna,377 xenoMrna,446 xenoRefGene,208 xenoRefGene,253 oommen transMapEnsemblV5,728 transMapEstV5,697 transMapRefSeqV5,697 transMapRnaV5,697 transMapV5,803 open-3.0 nestedRepeats,331 opin nestedRepeats,385 nestedRepeats,407 opposite chainDanRer7,546 chainFr3,546 chainGalGal6,546 chainGasAcu1,546 chainHg19,546 chainMm10,546 chainNetDanRer7,549 chainNetFr3,549 chainNetGalGal6,549 chainNetGasAcu1,549 chainNetHg19,549 chainNetMm10,549 chainNetOryLat2,555 chainOryLat2,552 netDanRer7,546 netFr3,546 netGalGal6,546 netGasAcu1,546 netHg19,546 netMm10,546 netOryLat2,552 option augustusGene,167 augustusGene,187 genscan,94 mrna,340 transMapEnsemblV5,134 transMapEstV5,103 transMapRefSeqV5,103 transMapRnaV5,103 transMapV5,209 xenoMrna,414 xenoRefGene,112 xenoRefGene,164 optional xenoRefGene,142 options gc5Base,70 genscan,85 or blastHg18KG,196 chainDanRer7,30 chainDanRer7,127 chainDanRer7,150 chainDanRer7,182 chainDanRer7,485 chainDanRer7,860 chainDanRer7,889 chainFr3,30 chainFr3,127 chainFr3,150 chainFr3,182 chainFr3,485 chainFr3,860 chainFr3,889 chainGalGal6,30 chainGalGal6,127 chainGalGal6,150 chainGalGal6,182 chainGalGal6,485 chainGalGal6,860 chainGalGal6,889 chainGasAcu1,30 chainGasAcu1,127 chainGasAcu1,150 chainGasAcu1,182 chainGasAcu1,485 chainGasAcu1,860 chainGasAcu1,889 chainHg19,30 chainHg19,127 chainHg19,150 chainHg19,182 chainHg19,485 chainHg19,860 chainHg19,889 chainMm10,30 chainMm10,127 chainMm10,150 chainMm10,182 chainMm10,485 chainMm10,860 chainMm10,889 chainNetDanRer7,33 chainNetDanRer7,130 chainNetDanRer7,153 chainNetDanRer7,185 chainNetDanRer7,488 chainNetDanRer7,863 chainNetDanRer7,892 chainNetFr3,33 chainNetFr3,130 chainNetFr3,153 chainNetFr3,185 chainNetFr3,488 chainNetFr3,863 chainNetFr3,892 chainNetGalGal6,33 chainNetGalGal6,130 chainNetGalGal6,153 chainNetGalGal6,185 chainNetGalGal6,488 chainNetGalGal6,863 chainNetGalGal6,892 chainNetGasAcu1,33 chainNetGasAcu1,130 chainNetGasAcu1,153 chainNetGasAcu1,185 chainNetGasAcu1,488 chainNetGasAcu1,863 chainNetGasAcu1,892 chainNetHg19,33 chainNetHg19,130 chainNetHg19,153 chainNetHg19,185 chainNetHg19,488 chainNetHg19,863 chainNetHg19,892 chainNetMm10,33 chainNetMm10,130 chainNetMm10,153 chainNetMm10,185 chainNetMm10,488 chainNetMm10,863 chainNetMm10,892 chainNetOryLat2,35 chainNetOryLat2,134 chainNetOryLat2,157 chainNetOryLat2,189 chainNetOryLat2,494 chainNetOryLat2,869 chainNetOryLat2,898 chainOryLat2,32 chainOryLat2,131 chainOryLat2,154 chainOryLat2,186 chainOryLat2,491 chainOryLat2,866 chainOryLat2,895 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 ensGene,68 ensGene,89 ensGene,110 mrna,118 mrna,242 mrna,261 mrna,270 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 netDanRer7,30 netDanRer7,127 netDanRer7,150 netDanRer7,182 netDanRer7,485 netDanRer7,860 netDanRer7,889 netFr3,30 netFr3,127 netFr3,150 netFr3,182 netFr3,485 netFr3,860 netFr3,889 netGalGal6,30 netGalGal6,127 netGalGal6,150 netGalGal6,182 netGalGal6,485 netGalGal6,860 netGalGal6,889 netGasAcu1,30 netGasAcu1,127 netGasAcu1,150 netGasAcu1,182 netGasAcu1,485 netGasAcu1,860 netGasAcu1,889 netHg19,30 netHg19,127 netHg19,150 netHg19,182 netHg19,485 netHg19,860 netHg19,889 netMm10,30 netMm10,127 netMm10,150 netMm10,182 netMm10,485 netMm10,860 netMm10,889 netOryLat2,32 netOryLat2,131 netOryLat2,154 netOryLat2,186 netOryLat2,491 netOryLat2,866 netOryLat2,895 tRNAs,183 tRNAs,211 tRNAs,235 tRNAs,300 transMapEnsemblV5,19 transMapEnsemblV5,531 transMapEnsemblV5,559 transMapEnsemblV5,602 transMapEnsemblV5,622 transMapEstV5,500 transMapEstV5,528 transMapEstV5,571 transMapEstV5,591 transMapRefSeqV5,500 transMapRefSeqV5,528 transMapRefSeqV5,571 transMapRefSeqV5,591 transMapRnaV5,500 transMapRnaV5,528 transMapRnaV5,571 transMapRnaV5,591 transMapV5,47 transMapV5,606 transMapV5,634 transMapV5,677 transMapV5,697 uniprot,317 uniprot,389 uniprot,436 uniprot,829 uniprot,888 uniprot,982 uniprot,1038 uniprot,1205 uniprot,1266 uniprot,1401 uniprot,1449 uniprot,1722 uniprot,1776 uniprot,1835 uniprot,1879 xenoMrna,92 xenoMrna,192 xenoMrna,316 xenoMrna,335 xenoMrna,344 xenoRefGene,130 order gap,27 gold,110 tRNAs,250 uniprot,872 ordered gap,102 gold,150 organ mrna,142 mrna,148 xenoMrna,216 xenoMrna,222 organism chainDanRer7,330 chainDanRer7,360 chainFr3,330 chainFr3,360 chainGalGal6,330 chainGalGal6,360 chainGasAcu1,330 chainGasAcu1,360 chainHg19,330 chainHg19,360 chainMm10,330 chainMm10,360 chainNetDanRer7,333 chainNetDanRer7,363 chainNetFr3,333 chainNetFr3,363 chainNetGalGal6,333 chainNetGalGal6,363 chainNetGasAcu1,333 chainNetGasAcu1,363 chainNetHg19,333 chainNetHg19,363 chainNetMm10,333 chainNetMm10,363 chainNetOryLat2,339 chainNetOryLat2,369 chainOryLat2,336 chainOryLat2,366 netDanRer7,330 netDanRer7,360 netFr3,330 netFr3,360 netGalGal6,330 netGalGal6,360 netGasAcu1,330 netGasAcu1,360 netHg19,330 netHg19,360 netMm10,330 netMm10,360 netOryLat2,336 netOryLat2,366 organism-specific blastHg18KG,90 organisms chainDanRer7,905 chainFr3,905 chainGalGal6,905 chainGasAcu1,905 chainHg19,905 chainMm10,905 chainNetDanRer7,908 chainNetFr3,908 chainNetGalGal6,908 chainNetGasAcu1,908 chainNetHg19,908 chainNetMm10,908 chainNetOryLat2,914 chainOryLat2,911 nestedRepeats,295 netDanRer7,905 netFr3,905 netGalGal6,905 netGasAcu1,905 netHg19,905 netMm10,905 netOryLat2,911 transMapEnsemblV5,159 transMapEnsemblV5,216 transMapEstV5,128 transMapEstV5,185 transMapRefSeqV5,128 transMapRefSeqV5,185 transMapRnaV5,128 transMapRnaV5,185 transMapV5,64 transMapV5,152 transMapV5,234 transMapV5,291 uniprot,998 xenoMrna,25 xenoRefGene,20 organize gold,236 organizes chainDanRer7,614 chainFr3,614 chainGalGal6,614 chainGasAcu1,614 chainHg19,614 chainMm10,614 chainNetDanRer7,617 chainNetFr3,617 chainNetGalGal6,617 chainNetGasAcu1,617 chainNetHg19,617 chainNetMm10,617 chainNetOryLat2,623 chainOryLat2,620 netDanRer7,614 netFr3,614 netGalGal6,614 netGasAcu1,614 netHg19,614 netMm10,614 netOryLat2,620 orientation chainDanRer7,547 chainFr3,547 chainGalGal6,547 chainGasAcu1,547 chainHg19,547 chainMm10,547 chainNetDanRer7,550 chainNetFr3,550 chainNetGalGal6,550 chainNetGasAcu1,550 chainNetHg19,550 chainNetMm10,550 chainNetOryLat2,556 chainOryLat2,553 cytoBandIdeo,6 gap,29 gold,112 netDanRer7,547 netFr3,547 netGalGal6,547 netGasAcu1,547 netHg19,547 netMm10,547 netOryLat2,553 xenoMrna,73 xenoMrna,95 orientations xenoMrna,105 oriented gap,104 gold,151 origin nestedRepeats,398 original nestedRepeats,84 orthologous transMapEnsemblV5,87 transMapEstV5,56 transMapRefSeqV5,56 transMapRnaV5,56 transMapV5,57 orthologs chainDanRer7,284 chainFr3,284 chainGalGal6,284 chainGasAcu1,284 chainHg19,284 chainMm10,284 chainNetDanRer7,287 chainNetFr3,287 chainNetGalGal6,287 chainNetGasAcu1,287 chainNetHg19,287 chainNetMm10,287 chainNetOryLat2,291 chainOryLat2,288 netDanRer7,284 netFr3,284 netGalGal6,284 netGasAcu1,284 netHg19,284 netMm10,284 netOryLat2,288 transMapV5,94 orylat2 chainNetOryLat2,10 chainNetOryLat2,76 chainNetOryLat2,312 chainNetOryLat2Viewchain,8 chainNetOryLat2Viewnet,8 chainOryLat2,9 chainOryLat2,73 chainOryLat2,309 netOryLat2,9 netOryLat2,73 netOryLat2,309 ostell mrna,427 xenoMrna,496 other augustusGene,208 chainDanRer7,24 chainDanRer7,412 chainDanRer7,505 chainFr3,24 chainFr3,412 chainFr3,505 chainGalGal6,24 chainGalGal6,412 chainGalGal6,505 chainGasAcu1,24 chainGasAcu1,412 chainGasAcu1,505 chainHg19,24 chainHg19,412 chainHg19,505 chainMm10,24 chainMm10,412 chainMm10,505 chainNetDanRer7,27 chainNetDanRer7,415 chainNetDanRer7,508 chainNetFr3,27 chainNetFr3,415 chainNetFr3,508 chainNetGalGal6,27 chainNetGalGal6,415 chainNetGalGal6,508 chainNetGasAcu1,27 chainNetGasAcu1,415 chainNetGasAcu1,508 chainNetHg19,27 chainNetHg19,415 chainNetHg19,508 chainNetMm10,27 chainNetMm10,415 chainNetMm10,508 chainNetOryLat2,29 chainNetOryLat2,421 chainNetOryLat2,514 chainOryLat2,26 chainOryLat2,418 chainOryLat2,511 cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 gap,177 nestedRepeats,376 netDanRer7,24 netDanRer7,412 netDanRer7,505 netFr3,24 netFr3,412 netFr3,505 netGalGal6,24 netGalGal6,412 netGalGal6,505 netGasAcu1,24 netGasAcu1,412 netGasAcu1,505 netHg19,24 netHg19,412 netHg19,505 netMm10,24 netMm10,412 netMm10,505 netOryLat2,26 netOryLat2,418 netOryLat2,511 tRNAs,243 transMapEnsemblV5,30 transMapEnsemblV5,46 transMapEnsemblV5,368 transMapEstV5,28 transMapEstV5,337 transMapRefSeqV5,28 transMapRefSeqV5,337 transMapRnaV5,28 transMapRnaV5,337 transMapV5,27 transMapV5,443 unipOther,1 unipOther,4 uniprot,90 uniprot,122 uniprot,205 uniprot,319 uniprot,393 uniprot,396 uniprot,862 uniprot,1200 xenoMrna,1 xenoMrna,26 xenoRefGene,1 xenoRefGene,21 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 uniprot,1312 uniprot,1344 otherwise cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 transMapEnsemblV5,246 transMapEstV5,215 transMapRefSeqV5,215 transMapRnaV5,215 transMapV5,321 ottonello tRNAs,478 ouml augustusGene,269 our augustusGene,43 cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 ensGene,26 ensGene,84 ensGene,91 ensGene,113 ensGene,124 ensGene,130 ensGene,141 genscan,58 transMapEnsemblV5,556 transMapEnsemblV5,562 transMapEnsemblV5,572 transMapEnsemblV5,611 transMapEstV5,525 transMapEstV5,531 transMapEstV5,541 transMapEstV5,580 transMapRefSeqV5,525 transMapRefSeqV5,531 transMapRefSeqV5,541 transMapRefSeqV5,580 transMapRnaV5,525 transMapRnaV5,531 transMapRnaV5,541 transMapRnaV5,580 transMapV5,631 transMapV5,637 transMapV5,647 transMapV5,686 uniprot,891 uniprot,1697 uniprot,1765 uniprot,1829 uniprot,1836 uniprot,1870 uniprot,1874 out chainDanRer7,634 chainFr3,634 chainGalGal6,634 chainGasAcu1,634 chainHg19,634 chainMm10,634 chainNetDanRer7,637 chainNetFr3,637 chainNetGalGal6,637 chainNetGasAcu1,637 chainNetHg19,637 chainNetMm10,637 chainNetOryLat2,643 chainOryLat2,640 netDanRer7,634 netFr3,634 netGalGal6,634 netGasAcu1,634 netHg19,634 netMm10,634 netOryLat2,640 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 windowmaskerSdust,63 windowmaskerSdust,72 outside uniprot,558 over blastHg18KG,104 blastHg18KG,118 chainDanRer7,195 chainDanRer7,649 chainFr3,195 chainFr3,649 chainGalGal6,195 chainGalGal6,649 chainGasAcu1,195 chainGasAcu1,649 chainHg19,195 chainHg19,649 chainMm10,195 chainMm10,649 chainNetDanRer7,198 chainNetDanRer7,652 chainNetFr3,198 chainNetFr3,652 chainNetGalGal6,198 chainNetGalGal6,652 chainNetGasAcu1,198 chainNetGasAcu1,652 chainNetHg19,198 chainNetHg19,652 chainNetMm10,198 chainNetMm10,652 chainNetOryLat2,202 chainNetOryLat2,658 chainOryLat2,199 chainOryLat2,655 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 netDanRer7,195 netDanRer7,649 netFr3,195 netFr3,649 netGalGal6,195 netGalGal6,649 netGasAcu1,195 netGasAcu1,649 netHg19,195 netHg19,649 netMm10,195 netMm10,649 netOryLat2,199 netOryLat2,655 uniprot,522 uniprot,536 overlapping chainDanRer7,112 chainDanRer7,175 chainFr3,112 chainFr3,175 chainGalGal6,112 chainGalGal6,175 chainGasAcu1,112 chainGasAcu1,175 chainHg19,112 chainHg19,175 chainMm10,112 chainMm10,175 chainNetDanRer7,115 chainNetDanRer7,178 chainNetFr3,115 chainNetFr3,178 chainNetGalGal6,115 chainNetGalGal6,178 chainNetGasAcu1,115 chainNetGasAcu1,178 chainNetHg19,115 chainNetHg19,178 chainNetMm10,115 chainNetMm10,178 chainNetOryLat2,119 chainNetOryLat2,182 chainOryLat2,116 chainOryLat2,179 gap,92 netDanRer7,112 netDanRer7,175 netFr3,112 netFr3,175 netGalGal6,112 netGalGal6,175 netGasAcu1,112 netGasAcu1,175 netHg19,112 netHg19,175 netMm10,112 netMm10,175 netOryLat2,116 netOryLat2,179 own uniprot,724 p genscan,205 nestedRepeats,329 pac chainDanRer7,1033 chainFr3,1033 chainGalGal6,1033 chainGasAcu1,1033 chainHg19,1033 chainMm10,1033 chainNetDanRer7,1036 chainNetFr3,1036 chainNetGalGal6,1036 chainNetGasAcu1,1036 chainNetHg19,1036 chainNetMm10,1036 chainNetOryLat2,1042 chainOryLat2,1039 netDanRer7,1033 netFr3,1033 netGalGal6,1033 netGasAcu1,1033 netHg19,1033 netMm10,1033 netOryLat2,1039 pack chainDanRer7,231 chainFr3,231 chainGalGal6,231 chainGasAcu1,231 chainHg19,231 chainMm10,231 chainNetDanRer7,234 chainNetFr3,234 chainNetGalGal6,234 chainNetGasAcu1,234 chainNetHg19,234 chainNetMm10,234 chainNetOryLat2,238 chainOryLat2,235 nestedRepeats,116 netDanRer7,231 netFr3,231 netGalGal6,231 netGasAcu1,231 netHg19,231 netMm10,231 netOryLat2,235 page cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 ensGene,127 ensGene,166 genscan,78 genscan,123 mrna,57 uniprot,236 uniprot,651 uniprot,1158 uniprot,1585 uniprot,2027 xenoMrna,131 xenoRefGene,98 xenoRefGene,189 pages chainDanRer7,770 chainFr3,770 chainGalGal6,770 chainGasAcu1,770 chainHg19,770 chainMm10,770 chainNetDanRer7,773 chainNetFr3,773 chainNetGalGal6,773 chainNetGasAcu1,773 chainNetHg19,773 chainNetMm10,773 chainNetOryLat2,779 chainOryLat2,776 netDanRer7,770 netFr3,770 netGalGal6,770 netGasAcu1,770 netHg19,770 netMm10,770 netOryLat2,776 pair gap,43 gap,133 paired-end gap,112 pairs gold,57 pairwise chainDanRer7,1011 chainDanRer7,1029 chainFr3,1011 chainFr3,1029 chainGalGal6,1011 chainGalGal6,1029 chainGasAcu1,1011 chainGasAcu1,1029 chainHg19,1011 chainHg19,1029 chainMm10,1011 chainMm10,1029 chainNetDanRer7,1014 chainNetDanRer7,1032 chainNetFr3,1014 chainNetFr3,1032 chainNetGalGal6,1014 chainNetGalGal6,1032 chainNetGasAcu1,1014 chainNetGasAcu1,1032 chainNetHg19,1014 chainNetHg19,1032 chainNetMm10,1014 chainNetMm10,1032 chainNetOryLat2,1020 chainNetOryLat2,1038 chainOryLat2,1017 chainOryLat2,1035 netDanRer7,1011 netDanRer7,1029 netFr3,1011 netFr3,1029 netGalGal6,1011 netGalGal6,1029 netGasAcu1,1011 netGasAcu1,1029 netHg19,1011 netHg19,1029 netMm10,1011 netMm10,1029 netOryLat2,1017 netOryLat2,1035 transMapEnsemblV5,336 transMapEstV5,305 transMapRefSeqV5,305 transMapRnaV5,305 transMapV5,83 transMapV5,411 paralogous transMapEnsemblV5,300 transMapEstV5,269 transMapRefSeqV5,269 transMapRnaV5,269 transMapV5,375 paralogs chainDanRer7,224 chainFr3,224 chainGalGal6,224 chainGasAcu1,224 chainHg19,224 chainMm10,224 chainNetDanRer7,227 chainNetFr3,227 chainNetGalGal6,227 chainNetGasAcu1,227 chainNetHg19,227 chainNetMm10,227 chainNetOryLat2,231 chainOryLat2,228 netDanRer7,224 netFr3,224 netGalGal6,224 netGasAcu1,224 netHg19,224 netMm10,224 netOryLat2,228 transMapV5,160 parameters gaze,112 windowmaskerSdust,57 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 part blastHg18KG,140 chainDanRer7,271 chainFr3,271 chainGalGal6,271 chainGasAcu1,271 chainHg19,271 chainMm10,271 chainNetDanRer7,274 chainNetFr3,274 chainNetGalGal6,274 chainNetGasAcu1,274 chainNetHg19,274 chainNetMm10,274 chainNetOryLat2,278 chainOryLat2,275 netDanRer7,271 netFr3,271 netGalGal6,271 netGasAcu1,271 netHg19,271 netMm10,271 netOryLat2,275 particular augustusGene,234 chainDanRer7,197 chainFr3,197 chainGalGal6,197 chainGasAcu1,197 chainHg19,197 chainMm10,197 chainNetDanRer7,200 chainNetFr3,200 chainNetGalGal6,200 chainNetGasAcu1,200 chainNetHg19,200 chainNetMm10,200 chainNetOryLat2,204 chainOryLat2,201 netDanRer7,197 netFr3,197 netGalGal6,197 netGasAcu1,197 netHg19,197 netMm10,197 netOryLat2,201 uniprot,1019 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 parts chainDanRer7,39 chainDanRer7,50 chainFr3,39 chainFr3,50 chainGalGal6,39 chainGalGal6,50 chainGasAcu1,39 chainGasAcu1,50 chainHg19,39 chainHg19,50 chainMm10,39 chainMm10,50 chainNetDanRer7,42 chainNetDanRer7,53 chainNetFr3,42 chainNetFr3,53 chainNetGalGal6,42 chainNetGalGal6,53 chainNetGasAcu1,42 chainNetGasAcu1,53 chainNetHg19,42 chainNetHg19,53 chainNetMm10,42 chainNetMm10,53 chainNetOryLat2,44 chainNetOryLat2,55 chainOryLat2,41 chainOryLat2,52 netDanRer7,39 netDanRer7,50 netFr3,39 netFr3,50 netGalGal6,39 netGalGal6,50 netGasAcu1,39 netGasAcu1,50 netHg19,39 netHg19,50 netMm10,39 netMm10,50 netOryLat2,41 netOryLat2,52 xenoMrna,68 past uniprot,1690 patch uniprot,1423 patches uniprot,1432 path gold,65 gold,72 gold,97 patterns augustusGene,56 pavesi tRNAs,41 tRNAs,470 penalty blastHg18KG,97 pennsylvania chainDanRer7,916 chainDanRer7,1019 chainFr3,916 chainFr3,1019 chainGalGal6,916 chainGalGal6,1019 chainGasAcu1,916 chainGasAcu1,1019 chainHg19,916 chainHg19,1019 chainMm10,916 chainMm10,1019 chainNetDanRer7,919 chainNetDanRer7,1022 chainNetFr3,919 chainNetFr3,1022 chainNetGalGal6,919 chainNetGalGal6,1022 chainNetGasAcu1,919 chainNetGasAcu1,1022 chainNetHg19,919 chainNetHg19,1022 chainNetMm10,919 chainNetMm10,1022 chainNetOryLat2,925 chainNetOryLat2,1028 chainOryLat2,922 chainOryLat2,1025 netDanRer7,916 netDanRer7,1019 netFr3,916 netFr3,1019 netGalGal6,916 netGalGal6,1019 netGasAcu1,916 netGasAcu1,1019 netHg19,916 netHg19,1019 netMm10,916 netMm10,1019 netOryLat2,922 netOryLat2,1025 peptide unipLocSignal,2 uniprot,477 uniprot,565 peptides blastHg18KG,21 unipLocSignal,5 uniprot,239 uniprot,512 per tRNAs,94 percent gc5Base,2 gc5Base,4 gc5Base,14 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5Base,18 perfect microsat,31 performed cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 period microsat,65 ph.d chainDanRer7,1016 chainFr3,1016 chainGalGal6,1016 chainGasAcu1,1016 chainHg19,1016 chainMm10,1016 chainNetDanRer7,1019 chainNetFr3,1019 chainNetGalGal6,1019 chainNetGasAcu1,1019 chainNetHg19,1019 chainNetMm10,1019 chainNetOryLat2,1025 chainOryLat2,1022 netDanRer7,1016 netFr3,1016 netGalGal6,1016 netGasAcu1,1016 netHg19,1016 netMm10,1016 netOryLat2,1022 pharmaceuticals uniprot,1969 phenotype uniprot,432 phosphorylation uniprot,590 phylofit transMapEnsemblV5,228 transMapEstV5,197 transMapRefSeqV5,197 transMapRnaV5,197 transMapV5,303 pia uniprot,1971 pick uniprot,1089 pipeline uniprot,1537 pipelines uniprot,1850 place chainDanRer7,789 chainFr3,789 chainGalGal6,789 chainGasAcu1,789 chainHg19,789 chainMm10,789 chainNetDanRer7,792 chainNetFr3,792 chainNetGalGal6,792 chainNetGasAcu1,792 chainNetHg19,792 chainNetMm10,792 chainNetOryLat2,798 chainOryLat2,795 netDanRer7,789 netFr3,789 netGalGal6,789 netGasAcu1,789 netHg19,789 netMm10,789 netOryLat2,795 placed chainDanRer7,831 chainFr3,831 chainGalGal6,831 chainGasAcu1,831 chainHg19,831 chainMm10,831 chainNetDanRer7,834 chainNetFr3,834 chainNetGalGal6,834 chainNetGasAcu1,834 chainNetHg19,834 chainNetMm10,834 chainNetOryLat2,840 chainOryLat2,837 gold,37 gold,200 netDanRer7,831 netFr3,831 netGalGal6,831 netGasAcu1,831 netHg19,831 netMm10,831 netOryLat2,837 places mrna,363 xenoMrna,436 xenoRefGene,243 please ensGene,41 ensGene,160 tRNAs,278 tRNAs,282 tRNAs,361 uniprot,685 uniprot,1439 uniprot,1826 plos transMapEnsemblV5,808 transMapEstV5,777 transMapRefSeqV5,777 transMapRnaV5,777 transMapV5,883 pmc chainDanRer7,1078 chainDanRer7,1109 chainFr3,1078 chainFr3,1109 chainGalGal6,1078 chainGalGal6,1109 chainGasAcu1,1078 chainGasAcu1,1109 chainHg19,1078 chainHg19,1109 chainMm10,1078 chainMm10,1109 chainNetDanRer7,1081 chainNetDanRer7,1112 chainNetFr3,1081 chainNetFr3,1112 chainNetGalGal6,1081 chainNetGalGal6,1112 chainNetGasAcu1,1081 chainNetGasAcu1,1112 chainNetHg19,1081 chainNetHg19,1112 chainNetMm10,1081 chainNetMm10,1112 chainNetOryLat2,1087 chainNetOryLat2,1118 chainOryLat2,1084 chainOryLat2,1115 ensGene,206 gaze,101 microsat,136 mrna,445 mrna,463 netDanRer7,1078 netDanRer7,1109 netFr3,1078 netFr3,1109 netGalGal6,1078 netGalGal6,1109 netGasAcu1,1078 netGasAcu1,1109 netHg19,1078 netHg19,1109 netMm10,1078 netMm10,1109 netOryLat2,1084 netOryLat2,1115 simpleRepeat,96 tRNAs,392 tRNAs,415 tRNAs,468 tRNAs,511 transMapEnsemblV5,752 transMapEnsemblV5,818 transMapEstV5,721 transMapEstV5,787 transMapRefSeqV5,721 transMapRefSeqV5,787 transMapRnaV5,721 transMapRnaV5,787 transMapV5,827 transMapV5,893 uniprot,2008 xenoMrna,514 xenoMrna,532 xenoRefGene,315 xenoRefGene,357 xenoRefGene,391 pmc146525 tRNAs,469 pmc148217 microsat,137 simpleRepeat,97 pmc186661 gaze,102 pmc187518 mrna,464 xenoMrna,533 xenoRefGene,316 pmc208784 chainDanRer7,1079 chainFr3,1079 chainGalGal6,1079 chainGasAcu1,1079 chainHg19,1079 chainMm10,1079 chainNetDanRer7,1082 chainNetFr3,1082 chainNetGalGal6,1082 chainNetGasAcu1,1082 chainNetHg19,1082 chainNetMm10,1082 chainNetOryLat2,1088 chainOryLat2,1085 netDanRer7,1079 netFr3,1079 netGalGal6,1079 netGasAcu1,1079 netHg19,1079 netMm10,1079 netOryLat2,1085 pmc2099585 transMapEnsemblV5,753 transMapEstV5,722 transMapRefSeqV5,722 transMapRnaV5,722 transMapV5,828 pmc2134963 transMapEnsemblV5,819 transMapEstV5,788 transMapRefSeqV5,788 transMapRnaV5,788 transMapV5,894 pmc2686519 tRNAs,393 pmc308124 tRNAs,416 pmc308779 mrna,446 xenoMrna,515 pmc3245120 uniprot,2009 pmc3965018 xenoRefGene,358 pmc430961 chainDanRer7,1110 chainFr3,1110 chainGalGal6,1110 chainGasAcu1,1110 chainHg19,1110 chainMm10,1110 chainNetDanRer7,1113 chainNetFr3,1113 chainNetGalGal6,1113 chainNetGasAcu1,1113 chainNetHg19,1113 chainNetMm10,1113 chainNetOryLat2,1119 chainOryLat2,1116 netDanRer7,1110 netFr3,1110 netGalGal6,1110 netGasAcu1,1110 netHg19,1110 netMm10,1110 netOryLat2,1116 pmc523650 tRNAs,512 pmc539979 xenoRefGene,392 pmc99161 ensGene,207 pmid augustusGene,314 augustusGene,339 chainDanRer7,1038 chainDanRer7,1076 chainDanRer7,1107 chainFr3,1038 chainFr3,1076 chainFr3,1107 chainGalGal6,1038 chainGalGal6,1076 chainGalGal6,1107 chainGasAcu1,1038 chainGasAcu1,1076 chainGasAcu1,1107 chainHg19,1038 chainHg19,1076 chainHg19,1107 chainMm10,1038 chainMm10,1076 chainMm10,1107 chainNetDanRer7,1041 chainNetDanRer7,1079 chainNetDanRer7,1110 chainNetFr3,1041 chainNetFr3,1079 chainNetFr3,1110 chainNetGalGal6,1041 chainNetGalGal6,1079 chainNetGalGal6,1110 chainNetGasAcu1,1041 chainNetGasAcu1,1079 chainNetGasAcu1,1110 chainNetHg19,1041 chainNetHg19,1079 chainNetHg19,1110 chainNetMm10,1041 chainNetMm10,1079 chainNetMm10,1110 chainNetOryLat2,1047 chainNetOryLat2,1085 chainNetOryLat2,1116 chainOryLat2,1044 chainOryLat2,1082 chainOryLat2,1113 cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 ensGene,204 gaze,99 genscan,229 microsat,134 mrna,443 mrna,461 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 netDanRer7,1038 netDanRer7,1076 netDanRer7,1107 netFr3,1038 netFr3,1076 netFr3,1107 netGalGal6,1038 netGalGal6,1076 netGalGal6,1107 netGasAcu1,1038 netGasAcu1,1076 netGasAcu1,1107 netHg19,1038 netHg19,1076 netHg19,1107 netMm10,1038 netMm10,1076 netMm10,1107 netOryLat2,1044 netOryLat2,1082 netOryLat2,1113 simpleRepeat,94 tRNAs,390 tRNAs,413 tRNAs,438 tRNAs,466 tRNAs,509 transMapEnsemblV5,750 transMapEnsemblV5,782 transMapEnsemblV5,816 transMapEstV5,719 transMapEstV5,751 transMapEstV5,785 transMapRefSeqV5,719 transMapRefSeqV5,751 transMapRefSeqV5,785 transMapRnaV5,719 transMapRnaV5,751 transMapRnaV5,785 transMapV5,825 transMapV5,857 transMapV5,891 uniprot,2006 uniprot,2050 windowmaskerSdust,113 xenoMrna,512 xenoMrna,530 xenoRefGene,313 xenoRefGene,355 xenoRefGene,389 poly-a augustusGene,62 polymorphic microsat,41 simpleRepeat,46 polypeptide unipChain,6 uniprot,287 uniprot,289 population microsat,44 position chainDanRer7,705 chainFr3,705 chainGalGal6,705 chainGasAcu1,705 chainHg19,705 chainMm10,705 chainNetDanRer7,708 chainNetFr3,708 chainNetGalGal6,708 chainNetGasAcu1,708 chainNetHg19,708 chainNetMm10,708 chainNetOryLat2,714 chainOryLat2,711 netDanRer7,705 netFr3,705 netGalGal6,705 netGasAcu1,705 netHg19,705 netMm10,705 netOryLat2,711 uniprot,610 positions uniprot,1495 positive tRNAs,88 possible chainDanRer7,406 chainFr3,406 chainGalGal6,406 chainGasAcu1,406 chainHg19,406 chainMm10,406 chainNetDanRer7,409 chainNetFr3,409 chainNetGalGal6,409 chainNetGasAcu1,409 chainNetHg19,409 chainNetMm10,409 chainNetOryLat2,415 chainOryLat2,412 netDanRer7,406 netFr3,406 netGalGal6,406 netGasAcu1,406 netHg19,406 netMm10,406 netOryLat2,412 uniprot,601 possibly chainDanRer7,283 chainFr3,283 chainGalGal6,283 chainGasAcu1,283 chainHg19,283 chainMm10,283 chainNetDanRer7,286 chainNetFr3,286 chainNetGalGal6,286 chainNetGasAcu1,286 chainNetHg19,286 chainNetMm10,286 chainNetOryLat2,290 chainOryLat2,287 netDanRer7,283 netFr3,283 netGalGal6,283 netGasAcu1,283 netHg19,283 netMm10,283 netOryLat2,287 simpleRepeat,18 post-alignment transMapEnsemblV5,303 transMapEstV5,272 transMapRefSeqV5,272 transMapRnaV5,272 transMapV5,378 post-processing uniprot,295 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 tRNAs,422 pp tRNAs,367 pre-filters tRNAs,43 pre-mrna genscan,185 precompiled transMapEnsemblV5,626 transMapEstV5,595 transMapRefSeqV5,595 transMapRnaV5,595 transMapV5,701 uniprot,1780 predicted blastHg18KG,24 blastHg18KG,38 cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 tRNAs,19 tRNAs,322 uniprot,48 uniprot,193 xenoMrna,112 xenoRefGene,68 prediction augustusGene,321 genscan,73 genscan,211 transMapEnsemblV5,84 transMapEstV5,53 transMapRefSeqV5,53 transMapRnaV5,53 transMapV5,54 xenoRefGene,53 predictions augustusGene,6 augustusGene,11 augustusGene,18 augustusGene,26 augustusGene,191 blastHg18KG,12 ensGene,8 ensGene,12 ensGene,40 gaze,10 genscan,5 genscan,9 genscan,14 genscan,24 genscan,112 genscan,118 tRNAs,12 tRNAs,78 tRNAs,295 transMapEnsemblV5,13 transMapEstV5,11 transMapRefSeqV5,12 transMapRnaV5,12 transMapV5,10 unipAliSwissprot,21 unipAliTrembl,13 unipChain,11 unipConflict,9 unipDisulfBond,9 unipDomain,7 unipInterest,9 unipLocCytopl,8 unipLocExtra,8 unipLocSignal,9 unipLocTransMemb,8 unipModif,10 unipMut,9 unipOther,9 unipRepeat,7 unipStruct,11 uniprot,10 xenoRefGene,9 xenoRefGene,155 xenoRefGene,184 prepared gc5Base,80 uniprot,712 present cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 presentation gc5Base,75 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 previous ensGene,132 uniprot,1654 previously chainDanRer7,909 chainFr3,909 chainGalGal6,909 chainGasAcu1,909 chainHg19,909 chainMm10,909 chainNetDanRer7,912 chainNetFr3,912 chainNetGalGal6,912 chainNetGasAcu1,912 chainNetHg19,912 chainNetMm10,912 chainNetOryLat2,918 chainOryLat2,915 netDanRer7,909 netFr3,909 netGalGal6,909 netGasAcu1,909 netHg19,909 netMm10,909 netOryLat2,915 primary tRNAs,73 tRNAs,234 unipStruct,4 uniprot,360 principal gap,68 pringle transMapEnsemblV5,792 transMapEstV5,761 transMapRefSeqV5,761 transMapRnaV5,761 transMapV5,867 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 probably tRNAs,151 tRNAs,189 problem uniprot,1359 uniprot,1389 proc chainDanRer7,1063 chainFr3,1063 chainGalGal6,1063 chainGasAcu1,1063 chainHg19,1063 chainMm10,1063 chainNetDanRer7,1066 chainNetFr3,1066 chainNetGalGal6,1066 chainNetGasAcu1,1066 chainNetHg19,1066 chainNetMm10,1066 chainNetOryLat2,1072 chainOryLat2,1069 netDanRer7,1063 netFr3,1063 netGalGal6,1063 netGasAcu1,1063 netHg19,1063 netMm10,1063 netOryLat2,1069 procedure uniprot,990 process chainDanRer7,813 chainFr3,813 chainGalGal6,813 chainGasAcu1,813 chainHg19,813 chainMm10,813 chainNetDanRer7,816 chainNetFr3,816 chainNetGalGal6,816 chainNetGasAcu1,816 chainNetHg19,816 chainNetMm10,816 chainNetOryLat2,822 chainOryLat2,819 gap,110 netDanRer7,813 netFr3,813 netGalGal6,813 netGasAcu1,813 netHg19,813 netMm10,813 netOryLat2,819 uniprot,321 uniprot,879 uniprot,905 uniprot,1229 uniprot,1448 processed chainDanRer7,212 chainFr3,212 chainGalGal6,212 chainGasAcu1,212 chainHg19,212 chainMm10,212 chainNetDanRer7,215 chainNetFr3,215 chainNetGalGal6,215 chainNetGasAcu1,215 chainNetHg19,215 chainNetMm10,215 chainNetOryLat2,219 chainOryLat2,216 netDanRer7,212 netFr3,212 netGalGal6,212 netGasAcu1,212 netHg19,212 netMm10,212 netOryLat2,216 produce blastHg18KG,188 produced gold,281 mrna,403 transMapEnsemblV5,22 transMapEnsemblV5,677 transMapEnsemblV5,701 transMapEstV5,20 transMapEstV5,646 transMapEstV5,670 transMapRefSeqV5,20 transMapRefSeqV5,646 transMapRefSeqV5,670 transMapRnaV5,20 transMapRnaV5,646 transMapRnaV5,670 transMapV5,19 transMapV5,141 transMapV5,752 transMapV5,776 xenoMrna,81 xenoMrna,472 xenoRefGene,281 products unipChain,5 program augustusGene,21 augustusGene,257 blastHg18KG,55 blastHg18KG,79 chainDanRer7,605 chainDanRer7,645 chainDanRer7,783 chainDanRer7,836 chainDanRer7,868 chainDanRer7,944 chainDanRer7,947 chainFr3,605 chainFr3,645 chainFr3,783 chainFr3,836 chainFr3,868 chainFr3,944 chainFr3,947 chainGalGal6,605 chainGalGal6,645 chainGalGal6,783 chainGalGal6,836 chainGalGal6,868 chainGalGal6,944 chainGalGal6,947 chainGasAcu1,605 chainGasAcu1,645 chainGasAcu1,783 chainGasAcu1,836 chainGasAcu1,868 chainGasAcu1,944 chainGasAcu1,947 chainHg19,605 chainHg19,645 chainHg19,783 chainHg19,836 chainHg19,868 chainHg19,944 chainHg19,947 chainMm10,605 chainMm10,645 chainMm10,783 chainMm10,836 chainMm10,868 chainMm10,944 chainMm10,947 chainNetDanRer7,608 chainNetDanRer7,648 chainNetDanRer7,786 chainNetDanRer7,839 chainNetDanRer7,871 chainNetDanRer7,947 chainNetDanRer7,950 chainNetFr3,608 chainNetFr3,648 chainNetFr3,786 chainNetFr3,839 chainNetFr3,871 chainNetFr3,947 chainNetFr3,950 chainNetGalGal6,608 chainNetGalGal6,648 chainNetGalGal6,786 chainNetGalGal6,839 chainNetGalGal6,871 chainNetGalGal6,947 chainNetGalGal6,950 chainNetGasAcu1,608 chainNetGasAcu1,648 chainNetGasAcu1,786 chainNetGasAcu1,839 chainNetGasAcu1,871 chainNetGasAcu1,947 chainNetGasAcu1,950 chainNetHg19,608 chainNetHg19,648 chainNetHg19,786 chainNetHg19,839 chainNetHg19,871 chainNetHg19,947 chainNetHg19,950 chainNetMm10,608 chainNetMm10,648 chainNetMm10,786 chainNetMm10,839 chainNetMm10,871 chainNetMm10,947 chainNetMm10,950 chainNetOryLat2,614 chainNetOryLat2,654 chainNetOryLat2,792 chainNetOryLat2,845 chainNetOryLat2,877 chainNetOryLat2,953 chainNetOryLat2,956 chainOryLat2,611 chainOryLat2,651 chainOryLat2,789 chainOryLat2,842 chainOryLat2,874 chainOryLat2,950 chainOryLat2,953 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 gaze,22 gaze,64 genscan,18 genscan,137 genscan,178 gold,217 microsat,100 microsat,120 mrna,355 nestedRepeats,30 netDanRer7,605 netDanRer7,645 netDanRer7,783 netDanRer7,836 netDanRer7,868 netDanRer7,944 netDanRer7,947 netFr3,605 netFr3,645 netFr3,783 netFr3,836 netFr3,868 netFr3,944 netFr3,947 netGalGal6,605 netGalGal6,645 netGalGal6,783 netGalGal6,836 netGalGal6,868 netGalGal6,944 netGalGal6,947 netGasAcu1,605 netGasAcu1,645 netGasAcu1,783 netGasAcu1,836 netGasAcu1,868 netGasAcu1,944 netGasAcu1,947 netHg19,605 netHg19,645 netHg19,783 netHg19,836 netHg19,868 netHg19,944 netHg19,947 netMm10,605 netMm10,645 netMm10,783 netMm10,836 netMm10,868 netMm10,944 netMm10,947 netOryLat2,611 netOryLat2,651 netOryLat2,789 netOryLat2,842 netOryLat2,874 netOryLat2,950 netOryLat2,953 simpleRepeat,62 simpleRepeat,80 tRNAs,28 tRNAs,53 tRNAs,63 tRNAs,446 transMapEnsemblV5,313 transMapEstV5,282 transMapRefSeqV5,282 transMapRnaV5,282 transMapV5,388 uniprot,1529 programmatic ensGene,99 programming gaze,91 programs chainDanRer7,993 chainFr3,993 chainGalGal6,993 chainGasAcu1,993 chainHg19,993 chainMm10,993 chainNetDanRer7,996 chainNetFr3,996 chainNetGalGal6,996 chainNetGasAcu1,996 chainNetHg19,996 chainNetMm10,996 chainNetOryLat2,1002 chainOryLat2,999 netDanRer7,993 netFr3,993 netGalGal6,993 netGasAcu1,993 netHg19,993 netMm10,993 netOryLat2,999 uniprot,1877 project ensGene,194 gold,257 xenoRefGene,298 projected uniprot,800 projection transMapEnsemblV5,57 transMapEnsemblV5,320 transMapEstV5,289 transMapRefSeqV5,289 transMapRnaV5,289 transMapV5,395 projects transMapEnsemblV5,709 transMapEstV5,678 transMapRefSeqV5,678 transMapRnaV5,678 transMapV5,784 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 pronounced uniprot,1392 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 prot.bed uniprot,1931 uniprot,1933 protein blastHg18KG,111 blastHg18KG,130 unipChain,4 unipStruct,3 uniprot,5 uniprot,15 uniprot,84 uniprot,95 uniprot,111 uniprot,113 uniprot,137 uniprot,153 uniprot,194 uniprot,196 uniprot,252 uniprot,256 uniprot,267 uniprot,278 uniprot,293 uniprot,324 uniprot,359 uniprot,635 uniprot,672 uniprot,742 uniprot,760 uniprot,780 uniprot,790 uniprot,906 uniprot,916 uniprot,954 uniprot,966 uniprot,970 uniprot,1020 uniprot,1037 uniprot,1072 uniprot,1099 uniprot,1218 uniprot,1241 uniprot,1244 uniprot,1333 uniprot,1607 uniprot,1635 uniprot,1854 uniprot,1888 uniprot,1989 uniprot,1994 uniprot,2041 xenoMrna,80 xenoMrna,113 protein-coding augustusGene,73 xenoRefGene,15 xenoRefGene,197 protein-genome uniprot,875 uniprot,1174 protein-protein uniprot,315 protein-to-genome uniprot,1703 proteins blastHg18KG,2 blastHg18KG,4 blastHg18KG,39 unipAliSwissprot,7 unipAliTrembl,7 uniprot,243 uniprot,744 uniprot,925 uniprot,929 uniprot,1005 uniprot,1188 uniprot,1364 uniprot,1385 uniprot,1404 uniprot,1470 xenoRefGene,378 provide uniprot,1860 provided gold,19 tRNAs,318 uniprot,817 provides uniprot,489 providing augustusGene,254 ensGene,153 gaze,123 genscan,175 nestedRepeats,312 provisional xenoRefGene,70 pruitt xenoRefGene,317 xenoRefGene,359 pseudo tRNAs,290 pseudogenes chainDanRer7,213 chainDanRer7,227 chainFr3,213 chainFr3,227 chainGalGal6,213 chainGalGal6,227 chainGasAcu1,213 chainGasAcu1,227 chainHg19,213 chainHg19,227 chainMm10,213 chainMm10,227 chainNetDanRer7,216 chainNetDanRer7,230 chainNetFr3,216 chainNetFr3,230 chainNetGalGal6,216 chainNetGalGal6,230 chainNetGasAcu1,216 chainNetGasAcu1,230 chainNetHg19,216 chainNetHg19,230 chainNetMm10,216 chainNetMm10,230 chainNetOryLat2,220 chainNetOryLat2,234 chainOryLat2,217 chainOryLat2,231 netDanRer7,213 netDanRer7,227 netFr3,213 netFr3,227 netGalGal6,213 netGalGal6,227 netGasAcu1,213 netGasAcu1,227 netHg19,213 netHg19,227 netMm10,213 netMm10,227 netOryLat2,217 netOryLat2,231 tRNAs,299 uniprot,1184 psl mrna,36 transMapEnsemblV5,102 transMapEstV5,71 transMapRefSeqV5,71 transMapRnaV5,71 transMapV5,177 uniprot,1479 xenoMrna,40 pslcdnafilter transMapEnsemblV5,351 transMapEstV5,320 transMapRefSeqV5,320 transMapRnaV5,320 transMapV5,426 pslmap transMapEnsemblV5,312 transMapEstV5,281 transMapRefSeqV5,281 transMapRnaV5,281 transMapV5,387 uniprot,889 uniprot,1497 uniprot,1528 uniprot,1880 uniprot,1900 pslreps uniprot,1482 uniprot,1502 public cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 ensGene,114 mrna,414 transMapEnsemblV5,693 transMapEstV5,662 transMapRefSeqV5,662 transMapRnaV5,662 transMapV5,768 uniprot,709 xenoMrna,483 publications uniprot,38 publicly nestedRepeats,275 pull-down xenoRefGene,171 purpose simpleRepeat,32 putative blastHg18KG,82 q uniprot,1904 uniprot,1914 q99697 uniprot,1926 qgap chainDanRer7,717 chainFr3,717 chainGalGal6,717 chainGasAcu1,717 chainHg19,717 chainMm10,717 chainNetDanRer7,720 chainNetFr3,720 chainNetGalGal6,720 chainNetGasAcu1,720 chainNetHg19,720 chainNetMm10,720 chainNetOryLat2,726 chainOryLat2,723 netDanRer7,717 netFr3,717 netGalGal6,717 netGasAcu1,717 netHg19,717 netMm10,717 netOryLat2,723 quality mrna,54 xenoMrna,58 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 ensGene,105 transMapEnsemblV5,560 transMapEstV5,529 transMapRefSeqV5,529 transMapRnaV5,529 transMapV5,635 query blastHg18KG,110 blastHg18KG,122 uniprot,1484 xenoMrna,76 questions uniprot,1834 quickly mrna,328 transMapEnsemblV5,122 transMapEstV5,91 transMapRefSeqV5,91 transMapRnaV5,91 transMapV5,197 xenoMrna,402 xenoRefGene,150 quite simpleRepeat,45 quot chainDanRer7,26 chainDanRer7,28 chainDanRer7,33 chainDanRer7,35 chainDanRer7,101 chainDanRer7,103 chainDanRer7,230 chainDanRer7,232 chainDanRer7,234 chainDanRer7,236 chainDanRer7,338 chainDanRer7,340 chainDanRer7,679 chainDanRer7,681 chainFr3,26 chainFr3,28 chainFr3,33 chainFr3,35 chainFr3,101 chainFr3,103 chainFr3,230 chainFr3,232 chainFr3,234 chainFr3,236 chainFr3,338 chainFr3,340 chainFr3,679 chainFr3,681 chainGalGal6,26 chainGalGal6,28 chainGalGal6,33 chainGalGal6,35 chainGalGal6,101 chainGalGal6,103 chainGalGal6,230 chainGalGal6,232 chainGalGal6,234 chainGalGal6,236 chainGalGal6,338 chainGalGal6,340 chainGalGal6,679 chainGalGal6,681 chainGasAcu1,26 chainGasAcu1,28 chainGasAcu1,33 chainGasAcu1,35 chainGasAcu1,101 chainGasAcu1,103 chainGasAcu1,230 chainGasAcu1,232 chainGasAcu1,234 chainGasAcu1,236 chainGasAcu1,338 chainGasAcu1,340 chainGasAcu1,679 chainGasAcu1,681 chainHg19,26 chainHg19,28 chainHg19,33 chainHg19,35 chainHg19,101 chainHg19,103 chainHg19,230 chainHg19,232 chainHg19,234 chainHg19,236 chainHg19,338 chainHg19,340 chainHg19,679 chainHg19,681 chainMm10,26 chainMm10,28 chainMm10,33 chainMm10,35 chainMm10,101 chainMm10,103 chainMm10,230 chainMm10,232 chainMm10,234 chainMm10,236 chainMm10,338 chainMm10,340 chainMm10,679 chainMm10,681 chainNetDanRer7,29 chainNetDanRer7,31 chainNetDanRer7,36 chainNetDanRer7,38 chainNetDanRer7,104 chainNetDanRer7,106 chainNetDanRer7,233 chainNetDanRer7,235 chainNetDanRer7,237 chainNetDanRer7,239 chainNetDanRer7,341 chainNetDanRer7,343 chainNetDanRer7,682 chainNetDanRer7,684 chainNetFr3,29 chainNetFr3,31 chainNetFr3,36 chainNetFr3,38 chainNetFr3,104 chainNetFr3,106 chainNetFr3,233 chainNetFr3,235 chainNetFr3,237 chainNetFr3,239 chainNetFr3,341 chainNetFr3,343 chainNetFr3,682 chainNetFr3,684 chainNetGalGal6,29 chainNetGalGal6,31 chainNetGalGal6,36 chainNetGalGal6,38 chainNetGalGal6,104 chainNetGalGal6,106 chainNetGalGal6,233 chainNetGalGal6,235 chainNetGalGal6,237 chainNetGalGal6,239 chainNetGalGal6,341 chainNetGalGal6,343 chainNetGalGal6,682 chainNetGalGal6,684 chainNetGasAcu1,29 chainNetGasAcu1,31 chainNetGasAcu1,36 chainNetGasAcu1,38 chainNetGasAcu1,104 chainNetGasAcu1,106 chainNetGasAcu1,233 chainNetGasAcu1,235 chainNetGasAcu1,237 chainNetGasAcu1,239 chainNetGasAcu1,341 chainNetGasAcu1,343 chainNetGasAcu1,682 chainNetGasAcu1,684 chainNetHg19,29 chainNetHg19,31 chainNetHg19,36 chainNetHg19,38 chainNetHg19,104 chainNetHg19,106 chainNetHg19,233 chainNetHg19,235 chainNetHg19,237 chainNetHg19,239 chainNetHg19,341 chainNetHg19,343 chainNetHg19,682 chainNetHg19,684 chainNetMm10,29 chainNetMm10,31 chainNetMm10,36 chainNetMm10,38 chainNetMm10,104 chainNetMm10,106 chainNetMm10,233 chainNetMm10,235 chainNetMm10,237 chainNetMm10,239 chainNetMm10,341 chainNetMm10,343 chainNetMm10,682 chainNetMm10,684 chainNetOryLat2,31 chainNetOryLat2,33 chainNetOryLat2,38 chainNetOryLat2,40 chainNetOryLat2,108 chainNetOryLat2,110 chainNetOryLat2,237 chainNetOryLat2,239 chainNetOryLat2,241 chainNetOryLat2,243 chainNetOryLat2,347 chainNetOryLat2,349 chainNetOryLat2,688 chainNetOryLat2,690 chainOryLat2,28 chainOryLat2,30 chainOryLat2,35 chainOryLat2,37 chainOryLat2,105 chainOryLat2,107 chainOryLat2,234 chainOryLat2,236 chainOryLat2,238 chainOryLat2,240 chainOryLat2,344 chainOryLat2,346 chainOryLat2,685 chainOryLat2,687 gc5Base,58 gc5Base,62 gold,170 gold,172 mrna,185 mrna,187 mrna,225 mrna,227 mrna,241 mrna,243 mrna,277 mrna,279 mrna,294 mrna,296 netDanRer7,26 netDanRer7,28 netDanRer7,33 netDanRer7,35 netDanRer7,101 netDanRer7,103 netDanRer7,230 netDanRer7,232 netDanRer7,234 netDanRer7,236 netDanRer7,338 netDanRer7,340 netDanRer7,679 netDanRer7,681 netFr3,26 netFr3,28 netFr3,33 netFr3,35 netFr3,101 netFr3,103 netFr3,230 netFr3,232 netFr3,234 netFr3,236 netFr3,338 netFr3,340 netFr3,679 netFr3,681 netGalGal6,26 netGalGal6,28 netGalGal6,33 netGalGal6,35 netGalGal6,101 netGalGal6,103 netGalGal6,230 netGalGal6,232 netGalGal6,234 netGalGal6,236 netGalGal6,338 netGalGal6,340 netGalGal6,679 netGalGal6,681 netGasAcu1,26 netGasAcu1,28 netGasAcu1,33 netGasAcu1,35 netGasAcu1,101 netGasAcu1,103 netGasAcu1,230 netGasAcu1,232 netGasAcu1,234 netGasAcu1,236 netGasAcu1,338 netGasAcu1,340 netGasAcu1,679 netGasAcu1,681 netHg19,26 netHg19,28 netHg19,33 netHg19,35 netHg19,101 netHg19,103 netHg19,230 netHg19,232 netHg19,234 netHg19,236 netHg19,338 netHg19,340 netHg19,679 netHg19,681 netMm10,26 netMm10,28 netMm10,33 netMm10,35 netMm10,101 netMm10,103 netMm10,230 netMm10,232 netMm10,234 netMm10,236 netMm10,338 netMm10,340 netMm10,679 netMm10,681 netOryLat2,28 netOryLat2,30 netOryLat2,35 netOryLat2,37 netOryLat2,105 netOryLat2,107 netOryLat2,234 netOryLat2,236 netOryLat2,238 netOryLat2,240 netOryLat2,344 netOryLat2,346 netOryLat2,685 netOryLat2,687 tRNAs,205 tRNAs,207 tRNAs,289 tRNAs,291 uniprot,63 uniprot,66 uniprot,261 uniprot,263 uniprot,272 uniprot,274 uniprot,283 uniprot,285 uniprot,412 uniprot,416 uniprot,423 uniprot,426 uniprot,431 uniprot,435 uniprot,437 uniprot,441 uniprot,468 uniprot,470 uniprot,471 uniprot,474 uniprot,475 uniprot,478 uniprot,572 uniprot,575 windowmaskerSdust,82 windowmaskerSdust,84 xenoMrna,259 xenoMrna,261 xenoMrna,299 xenoMrna,301 xenoMrna,315 xenoMrna,317 xenoMrna,351 xenoMrna,353 xenoMrna,368 xenoMrna,370 r augustusGene,291 chainDanRer7,1043 chainDanRer7,1089 chainFr3,1043 chainFr3,1089 chainGalGal6,1043 chainGalGal6,1089 chainGasAcu1,1043 chainGasAcu1,1089 chainHg19,1043 chainHg19,1089 chainMm10,1043 chainMm10,1089 chainNetDanRer7,1046 chainNetDanRer7,1092 chainNetFr3,1046 chainNetFr3,1092 chainNetGalGal6,1046 chainNetGalGal6,1092 chainNetGasAcu1,1046 chainNetGasAcu1,1092 chainNetHg19,1046 chainNetHg19,1092 chainNetMm10,1046 chainNetMm10,1092 chainNetOryLat2,1052 chainNetOryLat2,1098 chainOryLat2,1049 chainOryLat2,1095 gaze,78 nestedRepeats,327 netDanRer7,1043 netDanRer7,1089 netFr3,1043 netFr3,1089 netGalGal6,1043 netGalGal6,1089 netGasAcu1,1043 netGasAcu1,1089 netHg19,1043 netHg19,1089 netMm10,1043 netMm10,1089 netOryLat2,1049 netOryLat2,1095 tRNAs,397 transMapEnsemblV5,759 transMapEstV5,728 transMapRefSeqV5,728 transMapRnaV5,728 transMapV5,834 windowmaskerSdust,99 r.s chainDanRer7,1008 chainFr3,1008 chainGalGal6,1008 chainGasAcu1,1008 chainHg19,1008 chainMm10,1008 chainNetDanRer7,1011 chainNetFr3,1011 chainNetGalGal6,1011 chainNetGasAcu1,1011 chainNetHg19,1011 chainNetMm10,1011 chainNetOryLat2,1017 chainOryLat2,1014 netDanRer7,1008 netFr3,1008 netGalGal6,1008 netGasAcu1,1008 netHg19,1008 netMm10,1008 netOryLat2,1014 random augustusGene,119 gold,141 raney blastHg18KG,198 uniprot,1960 range nestedRepeats,227 nestedRepeats,236 tRNAs,260 transMapEnsemblV5,655 transMapEstV5,624 transMapRefSeqV5,624 transMapRnaV5,624 transMapV5,730 uniprot,1809 ranked chainDanRer7,780 chainFr3,780 chainGalGal6,780 chainGasAcu1,780 chainHg19,780 chainMm10,780 chainNetDanRer7,783 chainNetFr3,783 chainNetGalGal6,783 chainNetGasAcu1,783 chainNetHg19,783 chainNetMm10,783 chainNetOryLat2,789 chainOryLat2,786 netDanRer7,780 netFr3,780 netGalGal6,780 netGasAcu1,780 netHg19,780 netMm10,780 netOryLat2,786 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 rate tRNAs,89 ratio cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 raw transMapEnsemblV5,518 transMapEstV5,487 transMapRefSeqV5,487 transMapRnaV5,487 transMapV5,593 uniprot,1708 rc chainDanRer7,1091 chainFr3,1091 chainGalGal6,1091 chainGasAcu1,1091 chainHg19,1091 chainMm10,1091 chainNetDanRer7,1094 chainNetFr3,1094 chainNetGalGal6,1094 chainNetGasAcu1,1094 chainNetHg19,1094 chainNetMm10,1094 chainNetOryLat2,1100 chainOryLat2,1097 netDanRer7,1091 netFr3,1091 netGalGal6,1091 netGasAcu1,1091 netHg19,1091 netMm10,1091 netOryLat2,1097 read gap,42 gap,132 reads gap,94 gap,113 rearrangement chainDanRer7,289 chainDanRer7,492 chainDanRer7,1056 chainFr3,289 chainFr3,492 chainFr3,1056 chainGalGal6,289 chainGalGal6,492 chainGalGal6,1056 chainGasAcu1,289 chainGasAcu1,492 chainGasAcu1,1056 chainHg19,289 chainHg19,492 chainHg19,1056 chainMm10,289 chainMm10,492 chainMm10,1056 chainNetDanRer7,292 chainNetDanRer7,495 chainNetDanRer7,1059 chainNetFr3,292 chainNetFr3,495 chainNetFr3,1059 chainNetGalGal6,292 chainNetGalGal6,495 chainNetGalGal6,1059 chainNetGasAcu1,292 chainNetGasAcu1,495 chainNetGasAcu1,1059 chainNetHg19,292 chainNetHg19,495 chainNetHg19,1059 chainNetMm10,292 chainNetMm10,495 chainNetMm10,1059 chainNetOryLat2,296 chainNetOryLat2,501 chainNetOryLat2,1065 chainOryLat2,293 chainOryLat2,498 chainOryLat2,1062 netDanRer7,289 netDanRer7,492 netDanRer7,1056 netFr3,289 netFr3,492 netFr3,1056 netGalGal6,289 netGalGal6,492 netGalGal6,1056 netGasAcu1,289 netGasAcu1,492 netGasAcu1,1056 netHg19,289 netHg19,492 netHg19,1056 netMm10,289 netMm10,492 netMm10,1056 netOryLat2,293 netOryLat2,498 netOryLat2,1062 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 reasonably gap,165 recently uniprot,1186 reciprocal transMapEnsemblV5,239 transMapEstV5,208 transMapRefSeqV5,208 transMapRnaV5,208 transMapV5,65 transMapV5,314 record uniprot,496 xenoRefGene,65 refer ensGene,42 gaze,71 genscan,144 uniprot,1827 reference uniprot,1378 uniprot,1422 xenoRefGene,29 xenoRefGene,344 xenoRefGene,366 references augustusGene,285 chainDanRer7,1006 chainFr3,1006 chainGalGal6,1006 chainGasAcu1,1006 chainHg19,1006 chainMm10,1006 chainNetDanRer7,1009 chainNetFr3,1009 chainNetGalGal6,1009 chainNetGasAcu1,1009 chainNetHg19,1009 chainNetMm10,1009 chainNetOryLat2,1015 chainOryLat2,1012 cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 ensGene,52 ensGene,167 genscan,152 genscan,179 microsat,113 mrna,420 nestedRepeats,66 nestedRepeats,323 netDanRer7,1006 netFr3,1006 netGalGal6,1006 netGasAcu1,1006 netHg19,1006 netMm10,1006 netOryLat2,1012 simpleRepeat,73 tRNAs,354 transMapEnsemblV5,710 transMapEstV5,679 transMapRefSeqV5,679 transMapRnaV5,679 transMapV5,785 uniprot,1984 windowmaskerSdust,89 xenoMrna,489 xenoRefGene,299 refgene transMapEnsemblV5,592 transMapEstV5,561 transMapRefSeqV5,2 transMapRefSeqV5,561 transMapRnaV5,561 transMapV5,667 refseq transMapEnsemblV5,169 transMapEnsemblV5,704 transMapEstV5,138 transMapEstV5,673 transMapRefSeqV5,4 transMapRefSeqV5,17 transMapRefSeqV5,138 transMapRefSeqV5,673 transMapRnaV5,138 transMapRnaV5,673 transMapV5,244 transMapV5,779 uniprot,823 uniprot,828 uniprot,841 uniprot,845 uniprot,857 uniprot,864 uniprot,1002 uniprot,1010 uniprot,1055 uniprot,1207 uniprot,1236 uniprot,1276 uniprot,1290 xenoRefGene,2 xenoRefGene,4 xenoRefGene,32 xenoRefGene,64 xenoRefGene,297 xenoRefGene,339 xenoRefGene,368 regeneron uniprot,1968 region chainDanRer7,198 chainDanRer7,395 chainFr3,198 chainFr3,395 chainGalGal6,198 chainGalGal6,395 chainGasAcu1,198 chainGasAcu1,395 chainHg19,198 chainHg19,395 chainMm10,198 chainMm10,395 chainNetDanRer7,201 chainNetDanRer7,398 chainNetFr3,201 chainNetFr3,398 chainNetGalGal6,201 chainNetGalGal6,398 chainNetGasAcu1,201 chainNetGasAcu1,398 chainNetHg19,201 chainNetHg19,398 chainNetMm10,201 chainNetMm10,398 chainNetOryLat2,205 chainNetOryLat2,404 chainOryLat2,202 chainOryLat2,401 cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 netDanRer7,198 netDanRer7,395 netFr3,198 netFr3,395 netGalGal6,198 netGalGal6,395 netGasAcu1,198 netGasAcu1,395 netHg19,198 netHg19,395 netMm10,198 netMm10,395 netOryLat2,202 netOryLat2,401 uniprot,312 regions augustusGene,76 chainDanRer7,16 chainDanRer7,134 chainDanRer7,282 chainFr3,16 chainFr3,134 chainFr3,282 chainGalGal6,16 chainGalGal6,134 chainGalGal6,282 chainGasAcu1,16 chainGasAcu1,134 chainGasAcu1,282 chainHg19,16 chainHg19,134 chainHg19,282 chainMm10,16 chainMm10,134 chainMm10,282 chainNetDanRer7,19 chainNetDanRer7,137 chainNetDanRer7,285 chainNetFr3,19 chainNetFr3,137 chainNetFr3,285 chainNetGalGal6,19 chainNetGalGal6,137 chainNetGalGal6,285 chainNetGasAcu1,19 chainNetGasAcu1,137 chainNetGasAcu1,285 chainNetHg19,19 chainNetHg19,137 chainNetHg19,285 chainNetMm10,19 chainNetMm10,137 chainNetMm10,285 chainNetOryLat2,21 chainNetOryLat2,141 chainNetOryLat2,289 chainOryLat2,18 chainOryLat2,138 chainOryLat2,286 cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 genscan,48 microsat,14 netDanRer7,16 netDanRer7,134 netDanRer7,282 netFr3,16 netFr3,134 netFr3,282 netGalGal6,16 netGalGal6,134 netGalGal6,282 netGasAcu1,16 netGasAcu1,134 netGasAcu1,282 netHg19,16 netHg19,134 netHg19,282 netMm10,16 netMm10,134 netMm10,282 netOryLat2,18 netOryLat2,138 netOryLat2,286 simpleRepeat,39 tRNAs,499 transMapEnsemblV5,301 transMapEnsemblV5,601 transMapEstV5,270 transMapEstV5,570 transMapRefSeqV5,270 transMapRefSeqV5,570 transMapRnaV5,270 transMapRnaV5,570 transMapV5,376 transMapV5,676 unipInterest,3 uniprot,240 uniprot,297 uniprot,300 uniprot,328 uniprot,348 uniprot,368 uniprot,384 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related augustusGene,242 transMapV5,74 uniprot,551 relationship chainDanRer7,846 chainFr3,846 chainGalGal6,846 chainGasAcu1,846 chainHg19,846 chainMm10,846 chainNetDanRer7,849 chainNetFr3,849 chainNetGalGal6,849 chainNetGasAcu1,849 chainNetHg19,849 chainNetMm10,849 chainNetOryLat2,855 chainOryLat2,852 netDanRer7,846 netFr3,846 netGalGal6,846 netGasAcu1,846 netHg19,846 netMm10,846 netOryLat2,852 relative chainDanRer7,862 chainFr3,862 chainGalGal6,862 chainGasAcu1,862 chainHg19,862 chainMm10,862 chainNetDanRer7,865 chainNetFr3,865 chainNetGalGal6,865 chainNetGasAcu1,865 chainNetHg19,865 chainNetMm10,865 chainNetOryLat2,871 chainOryLat2,868 gap,26 gold,109 netDanRer7,862 netFr3,862 netGalGal6,862 netGasAcu1,862 netHg19,862 netMm10,862 netOryLat2,868 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 release gold,275 uniprot,1589 releases uniprot,1561 uniprot,1686 relevant mrna,104 uniprot,681 xenoMrna,178 remain uniprot,1189 remaining blastHg18KG,184 chainDanRer7,685 chainFr3,685 chainGalGal6,685 chainGasAcu1,685 chainHg19,685 chainMm10,685 chainNetDanRer7,688 chainNetFr3,688 chainNetGalGal6,688 chainNetGasAcu1,688 chainNetHg19,688 chainNetMm10,688 chainNetOryLat2,694 chainOryLat2,691 netDanRer7,685 netFr3,685 netGalGal6,685 netGasAcu1,685 netHg19,685 netMm10,685 netOryLat2,691 removed chainDanRer7,576 chainFr3,576 chainGalGal6,576 chainGasAcu1,576 chainHg19,576 chainMm10,576 chainNetDanRer7,579 chainNetFr3,579 chainNetGalGal6,579 chainNetGasAcu1,579 chainNetHg19,579 chainNetMm10,579 chainNetOryLat2,585 chainOryLat2,582 cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 netDanRer7,576 netFr3,576 netGalGal6,576 netGasAcu1,576 netHg19,576 netMm10,576 netOryLat2,582 uniprot,597 uniprot,1150 removes transMapEnsemblV5,306 transMapEstV5,275 transMapRefSeqV5,275 transMapRnaV5,275 transMapV5,381 rendered tRNAs,346 reorganizing uniprot,1987 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 simpleRepeat,47 repeated uniprot,386 uniprot,390 repeatmasker chainDanRer7,943 chainFr3,943 chainGalGal6,943 chainGasAcu1,943 chainHg19,943 chainMm10,943 chainNetDanRer7,946 chainNetFr3,946 chainNetGalGal6,946 chainNetGasAcu1,946 chainNetHg19,946 chainNetMm10,946 chainNetOryLat2,952 chainOryLat2,949 nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 netDanRer7,943 netFr3,943 netGalGal6,943 netGasAcu1,943 netHg19,943 netMm10,943 netOryLat2,949 repeats chainDanRer7,935 chainFr3,935 chainGalGal6,935 chainGasAcu1,935 chainHg19,935 chainMm10,935 chainNetDanRer7,938 chainNetFr3,938 chainNetGalGal6,938 chainNetGasAcu1,938 chainNetHg19,938 chainNetMm10,938 chainNetOryLat2,944 chainOryLat2,941 microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 netDanRer7,935 netFr3,935 netGalGal6,935 netGasAcu1,935 netHg19,935 netMm10,935 netOryLat2,941 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 unipRepeat,1 unipRepeat,3 uniprot,383 uniprot,440 windowmaskerSdust,11 repeats.bed windowmaskerSdust,73 windowmaskerSdust,75 repetitive nestedRepeats,351 uniprot,1400 represent chainDanRer7,132 chainDanRer7,159 chainDanRer7,442 chainDanRer7,447 chainFr3,132 chainFr3,159 chainFr3,442 chainFr3,447 chainGalGal6,132 chainGalGal6,159 chainGalGal6,442 chainGalGal6,447 chainGasAcu1,132 chainGasAcu1,159 chainGasAcu1,442 chainGasAcu1,447 chainHg19,132 chainHg19,159 chainHg19,442 chainHg19,447 chainMm10,132 chainMm10,159 chainMm10,442 chainMm10,447 chainNetDanRer7,135 chainNetDanRer7,162 chainNetDanRer7,445 chainNetDanRer7,450 chainNetFr3,135 chainNetFr3,162 chainNetFr3,445 chainNetFr3,450 chainNetGalGal6,135 chainNetGalGal6,162 chainNetGalGal6,445 chainNetGalGal6,450 chainNetGasAcu1,135 chainNetGasAcu1,162 chainNetGasAcu1,445 chainNetGasAcu1,450 chainNetHg19,135 chainNetHg19,162 chainNetHg19,445 chainNetHg19,450 chainNetMm10,135 chainNetMm10,162 chainNetMm10,445 chainNetMm10,450 chainNetOryLat2,139 chainNetOryLat2,166 chainNetOryLat2,451 chainNetOryLat2,456 chainOryLat2,136 chainOryLat2,163 chainOryLat2,448 chainOryLat2,453 netDanRer7,132 netDanRer7,159 netDanRer7,442 netDanRer7,447 netFr3,132 netFr3,159 netFr3,442 netFr3,447 netGalGal6,132 netGalGal6,159 netGalGal6,442 netGalGal6,447 netGasAcu1,132 netGasAcu1,159 netGasAcu1,442 netGasAcu1,447 netHg19,132 netHg19,159 netHg19,442 netHg19,447 netMm10,132 netMm10,159 netMm10,442 netMm10,447 netOryLat2,136 netOryLat2,163 netOryLat2,448 netOryLat2,453 tRNAs,80 represented gap,17 gap,116 gap,148 gap,169 representing gap,60 reproducibility uniprot,1645 required tRNAs,217 res chainDanRer7,1101 chainFr3,1101 chainGalGal6,1101 chainGasAcu1,1101 chainHg19,1101 chainMm10,1101 chainNetDanRer7,1104 chainNetFr3,1104 chainNetGalGal6,1104 chainNetGasAcu1,1104 chainNetHg19,1104 chainNetMm10,1104 chainNetOryLat2,1110 chainOryLat2,1107 ensGene,197 gaze,93 microsat,127 mrna,435 mrna,455 netDanRer7,1101 netFr3,1101 netGalGal6,1101 netGasAcu1,1101 netHg19,1101 netMm10,1101 netOryLat2,1107 simpleRepeat,87 tRNAs,383 tRNAs,406 tRNAs,459 tRNAs,502 transMapEnsemblV5,744 transMapEstV5,713 transMapRefSeqV5,713 transMapRnaV5,713 transMapV5,819 uniprot,1999 xenoMrna,504 xenoMrna,524 xenoRefGene,307 xenoRefGene,348 xenoRefGene,381 research gold,292 nestedRepeats,54 residues uniprot,344 resolve uniprot,1357 resolved uniprot,1284 resource uniprot,1995 uniprot,2033 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 ensGene,108 result chainDanRer7,172 chainFr3,172 chainGalGal6,172 chainGasAcu1,172 chainHg19,172 chainMm10,172 chainNetDanRer7,175 chainNetFr3,175 chainNetGalGal6,175 chainNetGasAcu1,175 chainNetHg19,175 chainNetMm10,175 chainNetOryLat2,179 chainOryLat2,176 cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 netDanRer7,172 netFr3,172 netGalGal6,172 netGasAcu1,172 netHg19,172 netMm10,172 netOryLat2,176 transMapEnsemblV5,504 transMapEstV5,473 transMapRefSeqV5,473 transMapRnaV5,473 transMapV5,579 uniprot,798 uniprot,1065 uniprot,1170 resulting chainDanRer7,595 chainFr3,595 chainGalGal6,595 chainGasAcu1,595 chainHg19,595 chainMm10,595 chainNetDanRer7,598 chainNetFr3,598 chainNetGalGal6,598 chainNetGasAcu1,598 chainNetHg19,598 chainNetMm10,598 chainNetOryLat2,604 chainOryLat2,601 gold,187 netDanRer7,595 netFr3,595 netGalGal6,595 netGasAcu1,595 netHg19,595 netMm10,595 netOryLat2,601 transMapEnsemblV5,81 transMapEnsemblV5,334 transMapEnsemblV5,346 transMapEnsemblV5,491 transMapEstV5,50 transMapEstV5,303 transMapEstV5,315 transMapEstV5,460 transMapRefSeqV5,50 transMapRefSeqV5,303 transMapRefSeqV5,315 transMapRefSeqV5,460 transMapRnaV5,50 transMapRnaV5,303 transMapRnaV5,315 transMapRnaV5,460 transMapV5,51 transMapV5,409 transMapV5,421 transMapV5,566 uniprot,874 uniprot,1137 uniprot,1308 results uniprot,1463 uniprot,1649 retained uniprot,795 review xenoRefGene,62 reviewed xenoRefGene,72 ribosome tRNAs,157 riestra uniprot,1972 rna tRNAs,4 tRNAs,375 tRNAs,398 tRNAs,452 transMapEnsemblV5,595 transMapEstV5,564 transMapRefSeqV5,564 transMapRnaV5,2 transMapRnaV5,5 transMapRnaV5,564 transMapV5,670 xenoRefGene,28 xenoRefGene,239 xenoRefGene,285 rnas xenoRefGene,217 robert chainDanRer7,983 chainFr3,983 chainGalGal6,983 chainGasAcu1,983 chainHg19,983 chainMm10,983 chainNetDanRer7,986 chainNetFr3,986 chainNetGalGal6,986 chainNetGasAcu1,986 chainNetHg19,986 chainNetMm10,986 chainNetOryLat2,992 chainOryLat2,989 nestedRepeats,307 netDanRer7,983 netFr3,983 netGalGal6,983 netGasAcu1,983 netHg19,983 netMm10,983 netOryLat2,989 tRNAs,351 role uniprot,309 ross chainDanRer7,932 chainFr3,932 chainGalGal6,932 chainGasAcu1,932 chainHg19,932 chainMm10,932 chainNetDanRer7,935 chainNetFr3,935 chainNetGalGal6,935 chainNetGasAcu1,935 chainNetHg19,935 chainNetMm10,935 chainNetOryLat2,941 chainOryLat2,938 netDanRer7,932 netFr3,932 netGalGal6,932 netGasAcu1,932 netHg19,932 netMm10,932 netOryLat2,938 rotated tRNAs,327 rough tRNAs,258 row nestedRepeats,179 rpts nestedRepeats,2 run chainDanRer7,648 chainFr3,648 chainGalGal6,648 chainGasAcu1,648 chainHg19,648 chainMm10,648 chainNetDanRer7,651 chainNetFr3,651 chainNetGalGal6,651 chainNetGasAcu1,651 chainNetHg19,651 chainNetMm10,651 chainNetOryLat2,657 chainOryLat2,654 gaze,105 netDanRer7,648 netFr3,648 netGalGal6,648 netGasAcu1,648 netHg19,648 netMm10,648 netOryLat2,654 windowmaskerSdust,53 s augustusGene,104 augustusGene,221 augustusGene,319 blastHg18KG,131 chainDanRer7,1051 chainDanRer7,1068 chainDanRer7,1081 chainFr3,1051 chainFr3,1068 chainFr3,1081 chainGalGal6,1051 chainGalGal6,1068 chainGalGal6,1081 chainGasAcu1,1051 chainGasAcu1,1068 chainGasAcu1,1081 chainHg19,1051 chainHg19,1068 chainHg19,1081 chainMm10,1051 chainMm10,1068 chainMm10,1081 chainNetDanRer7,1054 chainNetDanRer7,1071 chainNetDanRer7,1084 chainNetFr3,1054 chainNetFr3,1071 chainNetFr3,1084 chainNetGalGal6,1054 chainNetGalGal6,1071 chainNetGalGal6,1084 chainNetGasAcu1,1054 chainNetGasAcu1,1071 chainNetGasAcu1,1084 chainNetHg19,1054 chainNetHg19,1071 chainNetHg19,1084 chainNetMm10,1054 chainNetMm10,1071 chainNetMm10,1084 chainNetOryLat2,1060 chainNetOryLat2,1077 chainNetOryLat2,1090 chainOryLat2,1057 chainOryLat2,1074 chainOryLat2,1087 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 genscan,190 genscan,194 genscan,210 nestedRepeats,286 netDanRer7,1051 netDanRer7,1068 netDanRer7,1081 netFr3,1051 netFr3,1068 netFr3,1081 netGalGal6,1051 netGalGal6,1068 netGalGal6,1081 netGasAcu1,1051 netGasAcu1,1068 netGasAcu1,1081 netHg19,1051 netHg19,1068 netHg19,1081 netMm10,1051 netMm10,1068 netMm10,1081 netOryLat2,1057 netOryLat2,1074 netOryLat2,1087 tRNAs,479 transMapEnsemblV5,729 transMapEstV5,698 transMapRefSeqV5,698 transMapRnaV5,698 transMapV5,804 uniprot,751 uniprot,774 saccharomyces augustusGene,223 salzberg genscan,189 same chainDanRer7,521 chainDanRer7,536 chainFr3,521 chainFr3,536 chainGalGal6,521 chainGalGal6,536 chainGasAcu1,521 chainGasAcu1,536 chainHg19,521 chainHg19,536 chainMm10,521 chainMm10,536 chainNetDanRer7,524 chainNetDanRer7,539 chainNetFr3,524 chainNetFr3,539 chainNetGalGal6,524 chainNetGalGal6,539 chainNetGasAcu1,524 chainNetGasAcu1,539 chainNetHg19,524 chainNetHg19,539 chainNetMm10,524 chainNetMm10,539 chainNetOryLat2,530 chainNetOryLat2,545 chainOryLat2,527 chainOryLat2,542 nestedRepeats,143 netDanRer7,521 netDanRer7,536 netFr3,521 netFr3,536 netGalGal6,521 netGalGal6,536 netGasAcu1,521 netGasAcu1,536 netHg19,521 netHg19,536 netMm10,521 netMm10,536 netOryLat2,527 netOryLat2,542 tRNAs,247 uniprot,608 uniprot,612 uniprot,641 uniprot,1173 xenoMrna,122 xenoMrna,127 sample augustusGene,133 sampling augustusGene,129 sanborn transMapEnsemblV5,786 transMapEstV5,755 transMapRefSeqV5,755 transMapRnaV5,755 transMapV5,861 santa chainDanRer7,956 chainDanRer7,1001 chainFr3,956 chainFr3,1001 chainGalGal6,956 chainGalGal6,1001 chainGasAcu1,956 chainGasAcu1,1001 chainHg19,956 chainHg19,1001 chainMm10,956 chainMm10,1001 chainNetDanRer7,959 chainNetDanRer7,1004 chainNetFr3,959 chainNetFr3,1004 chainNetGalGal6,959 chainNetGalGal6,1004 chainNetGasAcu1,959 chainNetGasAcu1,1004 chainNetHg19,959 chainNetHg19,1004 chainNetMm10,959 chainNetMm10,1004 chainNetOryLat2,965 chainNetOryLat2,1010 chainOryLat2,962 chainOryLat2,1007 netDanRer7,956 netDanRer7,1001 netFr3,956 netFr3,1001 netGalGal6,956 netGalGal6,1001 netGasAcu1,956 netGasAcu1,1001 netHg19,956 netHg19,1001 netMm10,956 netMm10,1001 netOryLat2,962 netOryLat2,1007 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 scaffold gap,82 gap,96 gap,135 scaffolds gap,138 gold,1 gold,3 gold,38 gold,42 gold,145 gold,157 gold,201 gold,209 sch windowmaskerSdust,94 scheib uniprot,2012 schwartz chainDanRer7,923 chainDanRer7,1080 chainFr3,923 chainFr3,1080 chainGalGal6,923 chainGalGal6,1080 chainGasAcu1,923 chainGasAcu1,1080 chainHg19,923 chainHg19,1080 chainMm10,923 chainMm10,1080 chainNetDanRer7,926 chainNetDanRer7,1083 chainNetFr3,926 chainNetFr3,1083 chainNetGalGal6,926 chainNetGalGal6,1083 chainNetGasAcu1,926 chainNetGasAcu1,1083 chainNetHg19,926 chainNetHg19,1083 chainNetMm10,926 chainNetMm10,1083 chainNetOryLat2,932 chainNetOryLat2,1089 chainOryLat2,929 chainOryLat2,1086 netDanRer7,923 netDanRer7,1080 netFr3,923 netFr3,1080 netGalGal6,923 netGalGal6,1080 netGasAcu1,923 netGasAcu1,1080 netHg19,923 netHg19,1080 netMm10,923 netMm10,1080 netOryLat2,929 netOryLat2,1086 sci chainDanRer7,1066 chainFr3,1066 chainGalGal6,1066 chainGasAcu1,1066 chainHg19,1066 chainMm10,1066 chainNetDanRer7,1069 chainNetFr3,1069 chainNetGalGal6,1069 chainNetGasAcu1,1069 chainNetHg19,1069 chainNetMm10,1069 chainNetOryLat2,1075 chainOryLat2,1072 netDanRer7,1066 netFr3,1066 netGalGal6,1066 netGasAcu1,1066 netHg19,1066 netMm10,1066 netOryLat2,1072 science genscan,203 scientific uniprot,37 scientists mrna,418 transMapEnsemblV5,697 transMapEstV5,666 transMapRefSeqV5,666 transMapRnaV5,666 transMapV5,772 xenoMrna,487 xenoRefGene,290 score chainDanRer7,677 chainFr3,677 chainGalGal6,677 chainGasAcu1,677 chainHg19,677 chainMm10,677 chainNetDanRer7,680 chainNetFr3,680 chainNetGalGal6,680 chainNetGasAcu1,680 chainNetHg19,680 chainNetMm10,680 chainNetOryLat2,686 chainOryLat2,683 nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 netDanRer7,677 netFr3,677 netGalGal6,677 netGasAcu1,677 netHg19,677 netMm10,677 netOryLat2,683 tRNAs,116 tRNAs,121 tRNAs,259 uniprot,950 uniprot,1116 uniprot,1317 uniprot,1349 uniprot,1491 scores tRNAs,163 tRNAs,178 tRNAs,198 uniprot,1085 scoring chainDanRer7,77 chainDanRer7,87 chainDanRer7,656 chainDanRer7,673 chainDanRer7,1028 chainFr3,77 chainFr3,87 chainFr3,656 chainFr3,673 chainFr3,1028 chainGalGal6,77 chainGalGal6,87 chainGalGal6,656 chainGalGal6,673 chainGalGal6,1028 chainGasAcu1,77 chainGasAcu1,87 chainGasAcu1,656 chainGasAcu1,673 chainGasAcu1,1028 chainHg19,77 chainHg19,87 chainHg19,656 chainHg19,673 chainHg19,1028 chainMm10,77 chainMm10,87 chainMm10,656 chainMm10,673 chainMm10,1028 chainNetDanRer7,80 chainNetDanRer7,90 chainNetDanRer7,659 chainNetDanRer7,676 chainNetDanRer7,1031 chainNetFr3,80 chainNetFr3,90 chainNetFr3,659 chainNetFr3,676 chainNetFr3,1031 chainNetGalGal6,80 chainNetGalGal6,90 chainNetGalGal6,659 chainNetGalGal6,676 chainNetGalGal6,1031 chainNetGasAcu1,80 chainNetGasAcu1,90 chainNetGasAcu1,659 chainNetGasAcu1,676 chainNetGasAcu1,1031 chainNetHg19,80 chainNetHg19,90 chainNetHg19,659 chainNetHg19,676 chainNetHg19,1031 chainNetMm10,80 chainNetMm10,90 chainNetMm10,659 chainNetMm10,676 chainNetMm10,1031 chainNetOryLat2,84 chainNetOryLat2,94 chainNetOryLat2,665 chainNetOryLat2,682 chainNetOryLat2,1037 chainOryLat2,81 chainOryLat2,91 chainOryLat2,662 chainOryLat2,679 chainOryLat2,1034 cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 netDanRer7,77 netDanRer7,87 netDanRer7,656 netDanRer7,673 netDanRer7,1028 netFr3,77 netFr3,87 netFr3,656 netFr3,673 netFr3,1028 netGalGal6,77 netGalGal6,87 netGalGal6,656 netGalGal6,673 netGalGal6,1028 netGasAcu1,77 netGasAcu1,87 netGasAcu1,656 netGasAcu1,673 netGasAcu1,1028 netHg19,77 netHg19,87 netHg19,656 netHg19,673 netHg19,1028 netMm10,77 netMm10,87 netMm10,656 netMm10,673 netMm10,1028 netOryLat2,81 netOryLat2,91 netOryLat2,662 netOryLat2,679 netOryLat2,1034 tRNAs,294 scott chainDanRer7,922 chainFr3,922 chainGalGal6,922 chainGasAcu1,922 chainHg19,922 chainMm10,922 chainNetDanRer7,925 chainNetFr3,925 chainNetGalGal6,925 chainNetGasAcu1,925 chainNetHg19,925 chainNetMm10,925 chainNetOryLat2,931 chainOryLat2,928 netDanRer7,922 netFr3,922 netGalGal6,922 netGasAcu1,922 netHg19,922 netMm10,922 netOryLat2,928 screens nestedRepeats,32 script uniprot,1549 sdust windowmaskerSdust,2 windowmaskerSdust,8 windowmaskerSdust,68 search blastHg18KG,166 tRNAs,62 transMapEnsemblV5,798 transMapEstV5,767 transMapRefSeqV5,767 transMapRnaV5,767 transMapV5,873 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 searls genscan,191 second xenoMrna,91 secondary tRNAs,76 tRNAs,236 tRNAs,314 tRNAs,323 tRNAs,343 unipStruct,5 uniprot,361 secreted uniprot,247 section ensGene,53 genscan,153 nestedRepeats,67 uniprot,897 sections chainDanRer7,803 chainFr3,803 chainGalGal6,803 chainGasAcu1,803 chainHg19,803 chainMm10,803 chainNetDanRer7,806 chainNetFr3,806 chainNetGalGal6,806 chainNetGasAcu1,806 chainNetHg19,806 chainNetMm10,806 chainNetOryLat2,812 chainOryLat2,809 netDanRer7,803 netFr3,803 netGalGal6,803 netGasAcu1,803 netHg19,803 netMm10,803 netOryLat2,809 see augustusGene,42 blastHg18KG,152 ensGene,25 ensGene,161 genscan,57 microsat,101 nestedRepeats,296 nestedRepeats,370 simpleRepeat,63 transMapEnsemblV5,229 transMapEnsemblV5,571 transMapEstV5,198 transMapEstV5,540 transMapRefSeqV5,198 transMapRefSeqV5,540 transMapRnaV5,198 transMapRnaV5,540 transMapV5,304 transMapV5,646 uniprot,188 uniprot,526 uniprot,768 uniprot,894 xenoRefGene,207 segment cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 select genscan,90 xenoRefGene,160 selected mrna,229 mrna,245 mrna,298 transMapEnsemblV5,212 transMapEnsemblV5,249 transMapEnsemblV5,260 transMapEnsemblV5,328 transMapEstV5,181 transMapEstV5,218 transMapEstV5,229 transMapEstV5,297 transMapRefSeqV5,181 transMapRefSeqV5,218 transMapRefSeqV5,229 transMapRefSeqV5,297 transMapRnaV5,181 transMapRnaV5,218 transMapRnaV5,229 transMapRnaV5,297 transMapV5,287 transMapV5,324 transMapV5,335 transMapV5,403 uniprot,986 xenoMrna,303 xenoMrna,319 xenoMrna,372 selecting microsat,60 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 semi-markov augustusGene,117 sensitivity transMapV5,147 sep chainDanRer7,1071 chainFr3,1071 chainGalGal6,1071 chainGasAcu1,1071 chainHg19,1071 chainMm10,1071 chainNetDanRer7,1074 chainNetFr3,1074 chainNetGalGal6,1074 chainNetGasAcu1,1074 chainNetHg19,1074 chainNetMm10,1074 chainNetOryLat2,1080 chainOryLat2,1077 gaze,95 nestedRepeats,356 netDanRer7,1071 netFr3,1071 netGalGal6,1071 netGasAcu1,1071 netHg19,1071 netMm10,1071 netOryLat2,1077 seq unipConflict,1 sequence augustusGene,32 augustusGene,70 blastHg18KG,75 chainDanRer7,166 chainDanRer7,292 chainDanRer7,1031 chainFr3,166 chainFr3,292 chainFr3,1031 chainGalGal6,166 chainGalGal6,292 chainGalGal6,1031 chainGasAcu1,166 chainGasAcu1,292 chainGasAcu1,1031 chainHg19,166 chainHg19,292 chainHg19,1031 chainMm10,166 chainMm10,292 chainMm10,1031 chainNetDanRer7,169 chainNetDanRer7,295 chainNetDanRer7,1034 chainNetFr3,169 chainNetFr3,295 chainNetFr3,1034 chainNetGalGal6,169 chainNetGalGal6,295 chainNetGalGal6,1034 chainNetGasAcu1,169 chainNetGasAcu1,295 chainNetGasAcu1,1034 chainNetHg19,169 chainNetHg19,295 chainNetHg19,1034 chainNetMm10,169 chainNetMm10,295 chainNetMm10,1034 chainNetOryLat2,173 chainNetOryLat2,299 chainNetOryLat2,1040 chainOryLat2,170 chainOryLat2,296 chainOryLat2,1037 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 gap,93 gap,184 gold,28 gold,78 gold,190 gold,279 mrna,334 mrna,394 mrna,408 mrna,415 netDanRer7,166 netDanRer7,292 netDanRer7,1031 netFr3,166 netFr3,292 netFr3,1031 netGalGal6,166 netGalGal6,292 netGalGal6,1031 netGasAcu1,166 netGasAcu1,292 netGasAcu1,1031 netHg19,166 netHg19,292 netHg19,1031 netMm10,166 netMm10,292 netMm10,1031 netOryLat2,170 netOryLat2,296 netOryLat2,1037 tRNAs,74 tRNAs,182 tRNAs,380 tRNAs,399 tRNAs,456 transMapEnsemblV5,128 transMapEnsemblV5,687 transMapEnsemblV5,694 transMapEstV5,97 transMapEstV5,656 transMapEstV5,663 transMapRefSeqV5,97 transMapRefSeqV5,656 transMapRefSeqV5,663 transMapRnaV5,97 transMapRnaV5,656 transMapRnaV5,663 transMapV5,203 transMapV5,762 transMapV5,769 unipConflict,4 uniprot,356 uniprot,372 uniprot,381 uniprot,387 uniprot,636 uniprot,967 uniprot,971 uniprot,1134 uniprot,1219 uniprot,1242 uniprot,1379 uniprot,2035 windowmaskerSdust,17 xenoMrna,77 xenoMrna,101 xenoMrna,109 xenoMrna,408 xenoMrna,477 xenoMrna,484 xenoRefGene,274 xenoRefGene,286 xenoRefGene,367 xenoRefGene,372 sequenced windowmaskerSdust,104 sequences blastHg18KG,64 gold,269 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 simpleRepeat,84 tRNAs,428 uniprot,16 uniprot,85 uniprot,112 uniprot,114 uniprot,131 uniprot,138 uniprot,166 uniprot,195 uniprot,197 uniprot,377 uniprot,673 uniprot,781 uniprot,1103 uniprot,1374 uniprot,1424 uniprot,1608 uniprot,1611 uniprot,1889 xenoMrna,114 xenoRefGene,30 xenoRefGene,345 sequencing chainDanRer7,885 chainFr3,885 chainGalGal6,885 chainGasAcu1,885 chainHg19,885 chainMm10,885 chainNetDanRer7,888 chainNetFr3,888 chainNetGalGal6,888 chainNetGasAcu1,888 chainNetHg19,888 chainNetMm10,888 chainNetOryLat2,894 chainOryLat2,891 cytoBandIdeo,9 gap,6 gc5Base,10 gold,7 netDanRer7,885 netFr3,885 netGalGal6,885 netGasAcu1,885 netHg19,885 netMm10,885 netOryLat2,891 server ensGene,144 transMapEnsemblV5,558 transMapEstV5,527 transMapRefSeqV5,527 transMapRnaV5,527 transMapV5,633 uniprot,1699 uniprot,1745 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 ensGene,116 set blastHg18KG,146 gap,90 gap,99 tRNAs,71 transMapEnsemblV5,279 transMapEstV5,248 transMapRefSeqV5,248 transMapRnaV5,248 transMapV5,354 uniprot,838 uniprot,858 uniprot,1287 uniprot,1597 sets augustusGene,158 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 several transMapEnsemblV5,137 transMapEstV5,106 transMapRefSeqV5,106 transMapRnaV5,106 transMapV5,212 sf blastHg18KG,154 shade nestedRepeats,194 shaded mrna,49 nestedRepeats,182 xenoMrna,53 shades nestedRepeats,202 shading nestedRepeats,240 xenoRefGene,57 short uniprot,460 uniprot,978 shotgun gap,78 gap,109 gold,184 should mrna,265 tRNAs,226 xenoMrna,339 show uniprot,80 uniprot,227 uniprot,538 xenoRefGene,123 shown chainDanRer7,41 chainDanRer7,54 chainFr3,41 chainFr3,54 chainGalGal6,41 chainGalGal6,54 chainGasAcu1,41 chainGasAcu1,54 chainHg19,41 chainHg19,54 chainMm10,41 chainMm10,54 chainNetDanRer7,44 chainNetDanRer7,57 chainNetFr3,44 chainNetFr3,57 chainNetGalGal6,44 chainNetGalGal6,57 chainNetGasAcu1,44 chainNetGasAcu1,57 chainNetHg19,44 chainNetHg19,57 chainNetMm10,44 chainNetMm10,57 chainNetOryLat2,46 chainNetOryLat2,59 chainOryLat2,43 chainOryLat2,56 gold,100 microsat,48 mrna,94 netDanRer7,41 netDanRer7,54 netFr3,41 netFr3,54 netGalGal6,41 netGalGal6,54 netGasAcu1,41 netGasAcu1,54 netHg19,41 netHg19,54 netMm10,41 netMm10,54 netOryLat2,43 netOryLat2,56 uniprot,504 uniprot,628 uniprot,646 uniprot,1580 uniprot,1631 xenoMrna,168 shows augustusGene,15 augustusGene,108 chainDanRer7,15 chainDanRer7,62 chainDanRer7,263 chainFr3,15 chainFr3,62 chainFr3,263 chainGalGal6,15 chainGalGal6,62 chainGalGal6,263 chainGasAcu1,15 chainGasAcu1,62 chainGasAcu1,263 chainHg19,15 chainHg19,62 chainHg19,263 chainMm10,15 chainMm10,62 chainMm10,263 chainNetDanRer7,18 chainNetDanRer7,65 chainNetDanRer7,266 chainNetFr3,18 chainNetFr3,65 chainNetFr3,266 chainNetGalGal6,18 chainNetGalGal6,65 chainNetGalGal6,266 chainNetGasAcu1,18 chainNetGasAcu1,65 chainNetGasAcu1,266 chainNetHg19,18 chainNetHg19,65 chainNetHg19,266 chainNetMm10,18 chainNetMm10,65 chainNetMm10,266 chainNetOryLat2,20 chainNetOryLat2,67 chainNetOryLat2,270 chainOryLat2,17 chainOryLat2,64 chainOryLat2,267 gaze,14 gc5Base,16 genscan,13 gold,11 mrna,15 nestedRepeats,17 nestedRepeats,81 netDanRer7,15 netDanRer7,62 netDanRer7,263 netFr3,15 netFr3,62 netFr3,263 netGalGal6,15 netGalGal6,62 netGalGal6,263 netGasAcu1,15 netGasAcu1,62 netGasAcu1,263 netHg19,15 netHg19,62 netHg19,263 netMm10,15 netMm10,62 netMm10,263 netOryLat2,17 netOryLat2,64 netOryLat2,267 uniprot,14 uniprot,484 xenoRefGene,13 side gap,35 siepel transMapEnsemblV5,711 transMapEstV5,680 transMapRefSeqV5,680 transMapRnaV5,680 transMapV5,786 signal augustusGene,48 augustusGene,63 unipLocSignal,1 unipLocSignal,4 uniprot,238 uniprot,476 uniprot,511 uniprot,564 signals genscan,34 genscan,187 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 similar nestedRepeats,199 uniprot,1403 simple microsat,57 microsat,85 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 simultaneously chainDanRer7,99 chainFr3,99 chainGalGal6,99 chainGasAcu1,99 chainHg19,99 chainMm10,99 chainNetDanRer7,102 chainNetFr3,102 chainNetGalGal6,102 chainNetGasAcu1,102 chainNetHg19,102 chainNetMm10,102 chainNetOryLat2,106 chainOryLat2,103 netDanRer7,99 netFr3,99 netGalGal6,99 netGasAcu1,99 netHg19,99 netMm10,99 netOryLat2,103 since chainDanRer7,570 chainFr3,570 chainGalGal6,570 chainGasAcu1,570 chainHg19,570 chainMm10,570 chainNetDanRer7,573 chainNetFr3,573 chainNetGalGal6,573 chainNetGasAcu1,573 chainNetHg19,573 chainNetMm10,573 chainNetOryLat2,579 chainOryLat2,576 netDanRer7,570 netFr3,570 netGalGal6,570 netGasAcu1,570 netHg19,570 netMm10,570 netOryLat2,576 uniprot,1383 sines tRNAs,150 single blastHg18KG,99 chainDanRer7,126 chainDanRer7,135 chainDanRer7,619 chainDanRer7,624 chainFr3,126 chainFr3,135 chainFr3,619 chainFr3,624 chainGalGal6,126 chainGalGal6,135 chainGalGal6,619 chainGalGal6,624 chainGasAcu1,126 chainGasAcu1,135 chainGasAcu1,619 chainGasAcu1,624 chainHg19,126 chainHg19,135 chainHg19,619 chainHg19,624 chainMm10,126 chainMm10,135 chainMm10,619 chainMm10,624 chainNetDanRer7,129 chainNetDanRer7,138 chainNetDanRer7,622 chainNetDanRer7,627 chainNetFr3,129 chainNetFr3,138 chainNetFr3,622 chainNetFr3,627 chainNetGalGal6,129 chainNetGalGal6,138 chainNetGalGal6,622 chainNetGalGal6,627 chainNetGasAcu1,129 chainNetGasAcu1,138 chainNetGasAcu1,622 chainNetGasAcu1,627 chainNetHg19,129 chainNetHg19,138 chainNetHg19,622 chainNetHg19,627 chainNetMm10,129 chainNetMm10,138 chainNetMm10,622 chainNetMm10,627 chainNetOryLat2,133 chainNetOryLat2,142 chainNetOryLat2,628 chainNetOryLat2,633 chainOryLat2,130 chainOryLat2,139 chainOryLat2,625 chainOryLat2,630 mrna,358 nestedRepeats,178 netDanRer7,126 netDanRer7,135 netDanRer7,619 netDanRer7,624 netFr3,126 netFr3,135 netFr3,619 netFr3,624 netGalGal6,126 netGalGal6,135 netGalGal6,619 netGalGal6,624 netGasAcu1,126 netGasAcu1,135 netGasAcu1,619 netGasAcu1,624 netHg19,126 netHg19,135 netHg19,619 netHg19,624 netMm10,126 netMm10,135 netMm10,619 netMm10,624 netOryLat2,130 netOryLat2,139 netOryLat2,625 netOryLat2,630 transMapEnsemblV5,477 transMapEstV5,446 transMapRefSeqV5,446 transMapRnaV5,446 transMapV5,552 uniprot,141 xenoMrna,431 xenoRefGene,238 single-lined chainDanRer7,206 chainFr3,206 chainGalGal6,206 chainGasAcu1,206 chainHg19,206 chainMm10,206 chainNetDanRer7,209 chainNetFr3,209 chainNetGalGal6,209 chainNetGasAcu1,209 chainNetHg19,209 chainNetMm10,209 chainNetOryLat2,213 chainOryLat2,210 netDanRer7,206 netFr3,206 netGalGal6,206 netGasAcu1,206 netHg19,206 netMm10,206 netOryLat2,210 site genscan,157 windowmaskerSdust,45 sites augustusGene,54 augustusGene,59 cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 uniprot,342 uniprot,354 uniprot,578 uniprot,585 size blastHg18KG,93 gold,203 gold,211 gold,244 sizes gap,127 sm xenoRefGene,322 smallsize chainDanRer7,703 chainFr3,703 chainGalGal6,703 chainGasAcu1,703 chainHg19,703 chainMm10,703 chainNetDanRer7,706 chainNetFr3,706 chainNetGalGal6,706 chainNetGasAcu1,706 chainNetHg19,706 chainNetMm10,706 chainNetOryLat2,712 chainOryLat2,709 netDanRer7,703 netFr3,703 netGalGal6,703 netGasAcu1,703 netHg19,703 netMm10,703 netOryLat2,709 smit chainDanRer7,940 chainDanRer7,1084 chainFr3,940 chainFr3,1084 chainGalGal6,940 chainGalGal6,1084 chainGasAcu1,940 chainGasAcu1,1084 chainHg19,940 chainHg19,1084 chainMm10,940 chainMm10,1084 chainNetDanRer7,943 chainNetDanRer7,1087 chainNetFr3,943 chainNetFr3,1087 chainNetGalGal6,943 chainNetGalGal6,1087 chainNetGasAcu1,943 chainNetGasAcu1,1087 chainNetHg19,943 chainNetHg19,1087 chainNetMm10,943 chainNetMm10,1087 chainNetOryLat2,949 chainNetOryLat2,1093 chainOryLat2,946 chainOryLat2,1090 nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 netDanRer7,940 netDanRer7,1084 netFr3,940 netFr3,1084 netGalGal6,940 netGalGal6,1084 netGasAcu1,940 netGasAcu1,1084 netHg19,940 netHg19,1084 netMm10,940 netMm10,1084 netOryLat2,946 netOryLat2,1090 so chainDanRer7,434 chainFr3,434 chainGalGal6,434 chainGasAcu1,434 chainHg19,434 chainMm10,434 chainNetDanRer7,437 chainNetFr3,437 chainNetGalGal6,437 chainNetGasAcu1,437 chainNetHg19,437 chainNetMm10,437 chainNetOryLat2,443 chainOryLat2,440 netDanRer7,434 netFr3,434 netGalGal6,434 netGasAcu1,434 netHg19,434 netMm10,434 netOryLat2,440 tRNAs,277 uniprot,1135 uniprot,1430 software nestedRepeats,255 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 mrna,102 nestedRepeats,207 transMapEnsemblV5,297 transMapEnsemblV5,307 transMapEstV5,266 transMapEstV5,276 transMapRefSeqV5,266 transMapRefSeqV5,276 transMapRnaV5,266 transMapRnaV5,276 transMapV5,372 transMapV5,382 uniprot,318 xenoMrna,176 sometimes simpleRepeat,50 uniprot,983 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted chainDanRer7,772 chainFr3,772 chainGalGal6,772 chainGasAcu1,772 chainHg19,772 chainMm10,772 chainNetDanRer7,775 chainNetFr3,775 chainNetGalGal6,775 chainNetGasAcu1,775 chainNetHg19,775 chainNetMm10,775 chainNetOryLat2,781 chainOryLat2,778 netDanRer7,772 netFr3,772 netGalGal6,772 netGasAcu1,772 netHg19,772 netMm10,772 netOryLat2,778 uniprot,556 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 transMapEnsemblV5,152 transMapEnsemblV5,323 transMapEnsemblV5,340 transMapEnsemblV5,404 transMapEnsemblV5,429 transMapEnsemblV5,620 transMapEnsemblV5,634 transMapEstV5,121 transMapEstV5,292 transMapEstV5,309 transMapEstV5,373 transMapEstV5,398 transMapEstV5,589 transMapEstV5,603 transMapRefSeqV5,121 transMapRefSeqV5,292 transMapRefSeqV5,309 transMapRefSeqV5,373 transMapRefSeqV5,398 transMapRefSeqV5,589 transMapRefSeqV5,603 transMapRnaV5,121 transMapRnaV5,292 transMapRnaV5,309 transMapRnaV5,373 transMapRnaV5,398 transMapRnaV5,589 transMapRnaV5,603 transMapV5,227 transMapV5,398 transMapV5,415 transMapV5,479 transMapV5,504 transMapV5,695 transMapV5,709 uniprot,820 uniprot,1545 uniprot,1774 uniprot,1788 windowmaskerSdust,33 sources transMapEnsemblV5,48 transMapEnsemblV5,66 space uniprot,1990 spaces gold,98 span chainDanRer7,393 chainFr3,393 chainGalGal6,393 chainGasAcu1,393 chainHg19,393 chainMm10,393 chainNetDanRer7,396 chainNetFr3,396 chainNetGalGal6,396 chainNetGasAcu1,396 chainNetHg19,396 chainNetMm10,396 chainNetOryLat2,402 chainOryLat2,399 netDanRer7,393 netFr3,393 netGalGal6,393 netGasAcu1,393 netHg19,393 netMm10,393 netOryLat2,399 specialized simpleRepeat,29 species augustusGene,166 augustusGene,173 augustusGene,181 augustusGene,186 augustusGene,200 augustusGene,229 augustusGene,244 chainDanRer7,116 chainDanRer7,169 chainDanRer7,188 chainDanRer7,891 chainFr3,116 chainFr3,169 chainFr3,188 chainFr3,891 chainGalGal6,116 chainGalGal6,169 chainGalGal6,188 chainGalGal6,891 chainGasAcu1,116 chainGasAcu1,169 chainGasAcu1,188 chainGasAcu1,891 chainHg19,116 chainHg19,169 chainHg19,188 chainHg19,891 chainMm10,116 chainMm10,169 chainMm10,188 chainMm10,891 chainNetDanRer7,119 chainNetDanRer7,172 chainNetDanRer7,191 chainNetDanRer7,894 chainNetFr3,119 chainNetFr3,172 chainNetFr3,191 chainNetFr3,894 chainNetGalGal6,119 chainNetGalGal6,172 chainNetGalGal6,191 chainNetGalGal6,894 chainNetGasAcu1,119 chainNetGasAcu1,172 chainNetGasAcu1,191 chainNetGasAcu1,894 chainNetHg19,119 chainNetHg19,172 chainNetHg19,191 chainNetHg19,894 chainNetMm10,119 chainNetMm10,172 chainNetMm10,191 chainNetMm10,894 chainNetOryLat2,123 chainNetOryLat2,176 chainNetOryLat2,195 chainNetOryLat2,900 chainOryLat2,120 chainOryLat2,173 chainOryLat2,192 chainOryLat2,897 netDanRer7,116 netDanRer7,169 netDanRer7,188 netDanRer7,891 netFr3,116 netFr3,169 netFr3,188 netFr3,891 netGalGal6,116 netGalGal6,169 netGalGal6,188 netGalGal6,891 netGasAcu1,116 netGasAcu1,169 netGasAcu1,188 netGasAcu1,891 netHg19,116 netHg19,169 netHg19,188 netHg19,891 netMm10,116 netMm10,169 netMm10,188 netMm10,891 netOryLat2,120 netOryLat2,173 netOryLat2,192 netOryLat2,897 transMapEnsemblV5,32 transMapEnsemblV5,269 transMapEstV5,30 transMapEstV5,238 transMapRefSeqV5,30 transMapRefSeqV5,238 transMapRnaV5,30 transMapRnaV5,238 transMapV5,29 transMapV5,78 transMapV5,114 transMapV5,344 species-specific augustusGene,156 specific mrna,141 simpleRepeat,53 tRNAs,70 tRNAs,233 tRNAs,270 xenoMrna,215 splice augustusGene,53 genscan,156 uniprot,144 spliced transMapEnsemblV5,175 transMapEstV5,17 transMapEstV5,144 transMapRefSeqV5,144 transMapRnaV5,144 transMapV5,250 splicing augustusGene,123 genscan,33 genscan,186 split chainDanRer7,574 chainFr3,574 chainGalGal6,574 chainGasAcu1,574 chainHg19,574 chainMm10,574 chainNetDanRer7,577 chainNetFr3,577 chainNetGalGal6,577 chainNetGasAcu1,577 chainNetHg19,577 chainNetMm10,577 chainNetOryLat2,583 chainOryLat2,580 netDanRer7,574 netFr3,574 netGalGal6,574 netGasAcu1,574 netHg19,574 netMm10,574 netOryLat2,580 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 squish nestedRepeats,159 sr tRNAs,395 tRNAs,443 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srcuniq transMapEnsemblV5,421 transMapEstV5,390 transMapRefSeqV5,390 transMapRnaV5,390 transMapV5,496 staff uniprot,42 uniprot,1965 stage uniprot,1228 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 stanke augustusGene,103 augustusGene,251 augustusGene,284 augustusGene,286 augustusGene,316 transMapEnsemblV5,754 transMapEstV5,723 transMapRefSeqV5,723 transMapRnaV5,723 transMapV5,829 start augustusGene,58 cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 transMapEnsemblV5,668 transMapEstV5,637 transMapRefSeqV5,637 transMapRnaV5,637 transMapV5,743 uniprot,125 uniprot,209 uniprot,1821 state chainDanRer7,917 chainDanRer7,1020 chainFr3,917 chainFr3,1020 chainGalGal6,917 chainGalGal6,1020 chainGasAcu1,917 chainGasAcu1,1020 chainHg19,917 chainHg19,1020 chainMm10,917 chainMm10,1020 chainNetDanRer7,920 chainNetDanRer7,1023 chainNetFr3,920 chainNetFr3,1023 chainNetGalGal6,920 chainNetGalGal6,1023 chainNetGasAcu1,920 chainNetGasAcu1,1023 chainNetHg19,920 chainNetHg19,1023 chainNetMm10,920 chainNetMm10,1023 chainNetOryLat2,926 chainNetOryLat2,1029 chainOryLat2,923 chainOryLat2,1026 netDanRer7,917 netDanRer7,1020 netFr3,917 netFr3,1020 netGalGal6,917 netGalGal6,1020 netGasAcu1,917 netGasAcu1,1020 netHg19,917 netHg19,1020 netMm10,917 netMm10,1020 netOryLat2,923 netOryLat2,1026 statistical augustusGene,47 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 transMapEnsemblV5,672 transMapEstV5,641 transMapRefSeqV5,641 transMapRnaV5,641 transMapV5,747 uniprot,1825 stefanie augustusGene,267 step transMapEnsemblV5,305 transMapEstV5,274 transMapRefSeqV5,274 transMapRnaV5,274 transMapV5,380 uniprot,901 uniprot,1155 uniprot,1330 stevens transMapEnsemblV5,720 transMapEstV5,689 transMapRefSeqV5,689 transMapRnaV5,689 transMapV5,795 stickleback chainGasAcu1,1 chainGasAcu1,3 chainGasAcu1,65 chainGasAcu1,96 chainGasAcu1,148 chainGasAcu1,266 chainGasAcu1,291 chainGasAcu1,572 chainGasAcu1,620 chainNetGasAcu1,1 chainNetGasAcu1,4 chainNetGasAcu1,68 chainNetGasAcu1,99 chainNetGasAcu1,151 chainNetGasAcu1,269 chainNetGasAcu1,294 chainNetGasAcu1,575 chainNetGasAcu1,623 chainNetGasAcu1Viewchain,2 chainNetGasAcu1Viewnet,2 netGasAcu1,1 netGasAcu1,3 netGasAcu1,65 netGasAcu1,96 netGasAcu1,148 netGasAcu1,266 netGasAcu1,291 netGasAcu1,572 netGasAcu1,620 still tRNAs,142 storage chainDanRer7,974 chainFr3,974 chainGalGal6,974 chainGasAcu1,974 chainHg19,974 chainMm10,974 chainNetDanRer7,977 chainNetFr3,977 chainNetGalGal6,977 chainNetGasAcu1,977 chainNetHg19,977 chainNetMm10,977 chainNetOryLat2,983 chainOryLat2,980 netDanRer7,974 netFr3,974 netGalGal6,974 netGasAcu1,974 netHg19,974 netMm10,974 netOryLat2,980 stored transMapEnsemblV5,541 transMapEstV5,510 transMapRefSeqV5,510 transMapRnaV5,510 transMapV5,616 uniprot,1733 strand chainDanRer7,246 chainFr3,246 chainGalGal6,246 chainGasAcu1,246 chainHg19,246 chainMm10,246 chainNetDanRer7,249 chainNetFr3,249 chainNetGalGal6,249 chainNetGasAcu1,249 chainNetHg19,249 chainNetMm10,249 chainNetOryLat2,253 chainOryLat2,250 cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 nestedRepeats,144 nestedRepeats,155 netDanRer7,246 netFr3,246 netGalGal6,246 netGasAcu1,246 netHg19,246 netMm10,246 netOryLat2,250 xenoMrna,60 strands uniprot,365 strategy uniprot,1120 uniprot,1193 stringency transMapV5,119 structural tRNAs,184 structure augustusGene,113 tRNAs,77 tRNAs,237 tRNAs,315 unipStruct,1 unipStruct,6 uniprot,362 uniprot,2037 structures augustusGene,164 genscan,215 tRNAs,324 tRNAs,344 studies tRNAs,272 studying chainDanRer7,287 chainFr3,287 chainGalGal6,287 chainGasAcu1,287 chainHg19,287 chainMm10,287 chainNetDanRer7,290 chainNetFr3,290 chainNetGalGal6,290 chainNetGasAcu1,290 chainNetHg19,290 chainNetMm10,290 chainNetOryLat2,294 chainOryLat2,291 netDanRer7,287 netFr3,287 netGalGal6,287 netGasAcu1,287 netHg19,287 netMm10,287 netOryLat2,291 subcellular uniprot,553 submitted mrna,410 transMapEnsemblV5,689 transMapEstV5,658 transMapRefSeqV5,658 transMapRnaV5,658 transMapV5,764 xenoMrna,479 submodel augustusGene,331 subsections chainDanRer7,638 chainFr3,638 chainGalGal6,638 chainGasAcu1,638 chainHg19,638 chainMm10,638 chainNetDanRer7,641 chainNetFr3,641 chainNetGalGal6,641 chainNetGasAcu1,641 chainNetHg19,641 chainNetMm10,641 chainNetOryLat2,647 chainOryLat2,644 netDanRer7,638 netFr3,638 netGalGal6,638 netGasAcu1,638 netHg19,638 netMm10,638 netOryLat2,644 subsequent transMapEnsemblV5,439 transMapEstV5,408 transMapRefSeqV5,408 transMapRnaV5,408 transMapV5,514 subset microsat,54 mrna,80 transMapEnsemblV5,206 transMapEstV5,175 transMapRefSeqV5,175 transMapRnaV5,175 transMapV5,281 xenoMrna,154 substantial chainDanRer7,165 chainFr3,165 chainGalGal6,165 chainGasAcu1,165 chainHg19,165 chainMm10,165 chainNetDanRer7,168 chainNetFr3,168 chainNetGalGal6,168 chainNetGasAcu1,168 chainNetHg19,168 chainNetMm10,168 chainNetOryLat2,172 chainOryLat2,169 netDanRer7,165 netFr3,165 netGalGal6,165 netGasAcu1,165 netHg19,165 netMm10,165 netOryLat2,169 subtrack uniprot,411 subtracks chainDanRer7,29 chainDanRer7,36 chainFr3,29 chainFr3,36 chainGalGal6,29 chainGalGal6,36 chainGasAcu1,29 chainGasAcu1,36 chainHg19,29 chainHg19,36 chainMm10,29 chainMm10,36 chainNetDanRer7,32 chainNetDanRer7,39 chainNetFr3,32 chainNetFr3,39 chainNetGalGal6,32 chainNetGalGal6,39 chainNetGasAcu1,32 chainNetGasAcu1,39 chainNetHg19,32 chainNetHg19,39 chainNetMm10,32 chainNetMm10,39 chainNetOryLat2,34 chainNetOryLat2,41 chainOryLat2,31 chainOryLat2,38 netDanRer7,29 netDanRer7,36 netFr3,29 netFr3,36 netGalGal6,29 netGalGal6,36 netGasAcu1,29 netGasAcu1,36 netHg19,29 netHg19,36 netMm10,29 netMm10,36 netOryLat2,31 netOryLat2,38 uniprot,59 uniprot,72 uniprot,520 uniprot,548 such chainDanRer7,852 chainFr3,852 chainGalGal6,852 chainGasAcu1,852 chainHg19,852 chainMm10,852 chainNetDanRer7,855 chainNetFr3,855 chainNetGalGal6,855 chainNetGasAcu1,855 chainNetHg19,855 chainNetMm10,855 chainNetOryLat2,861 chainOryLat2,858 cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 netDanRer7,852 netFr3,852 netGalGal6,852 netGasAcu1,852 netHg19,852 netMm10,852 netOryLat2,858 uniprot,306 suffix transMapEnsemblV5,398 transMapEstV5,367 transMapRefSeqV5,367 transMapRnaV5,367 transMapV5,473 uniprot,1255 suitable uniprot,1868 supercontig gold,174 supercontigs gold,4 gold,115 suppl augustusGene,336 supported gap,40 sure uniprot,1407 swiss-prot uniprot,2025 swissprot unipAliSwissprot,1 unipAliSwissprot,6 uniprot,3 uniprot,24 uniprot,31 uniprot,76 uniprot,109 uniprot,116 uniprot,127 uniprot,414 uniprot,454 uniprot,495 uniprot,623 uniprot,703 uniprot,1373 symp chainDanRer7,1034 chainFr3,1034 chainGalGal6,1034 chainGasAcu1,1034 chainHg19,1034 chainMm10,1034 chainNetDanRer7,1037 chainNetFr3,1037 chainNetGalGal6,1037 chainNetGasAcu1,1037 chainNetHg19,1037 chainNetMm10,1037 chainNetOryLat2,1043 chainOryLat2,1040 netDanRer7,1034 netFr3,1034 netGalGal6,1034 netGasAcu1,1034 netHg19,1034 netMm10,1034 netOryLat2,1040 syn chainDanRer7,517 chainFr3,517 chainGalGal6,517 chainGasAcu1,517 chainHg19,517 chainMm10,517 chainNetDanRer7,520 chainNetFr3,520 chainNetGalGal6,520 chainNetGasAcu1,520 chainNetHg19,520 chainNetMm10,520 chainNetOryLat2,526 chainOryLat2,523 netDanRer7,517 netFr3,517 netGalGal6,517 netGasAcu1,517 netHg19,517 netMm10,517 netOryLat2,523 transMapEnsemblV5,253 transMapEstV5,222 transMapRefSeqV5,222 transMapRnaV5,222 transMapV5,328 syntenic chainDanRer7,281 chainDanRer7,859 chainFr3,281 chainFr3,859 chainGalGal6,281 chainGalGal6,859 chainGasAcu1,281 chainGasAcu1,859 chainHg19,281 chainHg19,859 chainMm10,281 chainMm10,859 chainNetDanRer7,284 chainNetDanRer7,862 chainNetFr3,284 chainNetFr3,862 chainNetGalGal6,284 chainNetGalGal6,862 chainNetGasAcu1,284 chainNetGasAcu1,862 chainNetHg19,284 chainNetHg19,862 chainNetMm10,284 chainNetMm10,862 chainNetOryLat2,288 chainNetOryLat2,868 chainOryLat2,285 chainOryLat2,865 netDanRer7,281 netDanRer7,859 netFr3,281 netFr3,859 netGalGal6,281 netGalGal6,859 netGasAcu1,281 netGasAcu1,859 netHg19,281 netHg19,859 netMm10,281 netMm10,859 netOryLat2,285 netOryLat2,865 transMapEnsemblV5,235 transMapEnsemblV5,514 transMapEstV5,204 transMapEstV5,483 transMapRefSeqV5,204 transMapRefSeqV5,483 transMapRnaV5,204 transMapRnaV5,483 transMapV5,310 transMapV5,589 syntenically augustusGene,297 transMapEnsemblV5,76 transMapEnsemblV5,765 transMapEstV5,45 transMapEstV5,734 transMapRefSeqV5,45 transMapRefSeqV5,734 transMapRnaV5,45 transMapRnaV5,734 transMapV5,44 transMapV5,840 synteny chainDanRer7,32 chainFr3,32 chainGalGal6,32 chainGasAcu1,32 chainHg19,32 chainMm10,32 chainNetDanRer7,35 chainNetFr3,35 chainNetGalGal6,35 chainNetGasAcu1,35 chainNetHg19,35 chainNetMm10,35 chainNetOryLat2,37 chainOryLat2,34 netDanRer7,32 netFr3,32 netGalGal6,32 netGasAcu1,32 netHg19,32 netMm10,32 netOryLat2,34 transMapEnsemblV5,274 transMapEstV5,243 transMapRefSeqV5,243 transMapRnaV5,243 transMapV5,349 synteny-filtered transMapV5,82 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system chainDanRer7,78 chainFr3,78 chainGalGal6,78 chainGasAcu1,78 chainHg19,78 chainMm10,78 chainNetDanRer7,81 chainNetFr3,81 chainNetGalGal6,81 chainNetGasAcu1,81 chainNetHg19,81 chainNetMm10,81 chainNetOryLat2,85 chainOryLat2,82 netDanRer7,78 netFr3,78 netGalGal6,78 netGasAcu1,78 netHg19,78 netMm10,78 netOryLat2,82 transMapEnsemblV5,630 transMapEstV5,599 transMapRefSeqV5,599 transMapRnaV5,599 transMapV5,705 uniprot,1353 uniprot,1784 systems chainDanRer7,88 chainFr3,88 chainGalGal6,88 chainGasAcu1,88 chainHg19,88 chainMm10,88 chainNetDanRer7,91 chainNetFr3,91 chainNetGalGal6,91 chainNetGasAcu1,91 chainNetHg19,91 chainNetMm10,91 chainNetOryLat2,95 chainOryLat2,92 netDanRer7,88 netFr3,88 netGalGal6,88 netGasAcu1,88 netHg19,88 netMm10,88 netOryLat2,92 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 ensGene,169 ensGene,181 ensGene,187 gaze,76 xenoRefGene,362 t-100-25-9091 chainDanRer7,671 chainFr3,671 chainGalGal6,671 chainHg19,671 chainMm10,671 chainNetDanRer7,674 chainNetFr3,674 chainNetGalGal6,674 chainNetHg19,674 chainNetMm10,674 chainNetOryLat2,680 chainOryLat2,677 netDanRer7,671 netFr3,671 netGalGal6,671 netHg19,671 netMm10,671 netOryLat2,677 t-123-31-11491 chainGasAcu1,671 chainNetGasAcu1,674 netGasAcu1,671 table augustusGene,225 cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 ensGene,66 mrna,166 mrna,169 mrna,188 transMapEnsemblV5,529 transMapEstV5,498 transMapRefSeqV5,498 transMapRnaV5,498 transMapV5,604 uniprot,1720 windowmaskerSdust,85 xenoMrna,240 xenoMrna,243 xenoMrna,262 tables cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 uniprot,1301 tablesize chainDanRer7,701 chainFr3,701 chainGalGal6,701 chainGasAcu1,701 chainHg19,701 chainMm10,701 chainNetDanRer7,704 chainNetFr3,704 chainNetGalGal6,704 chainNetGasAcu1,704 chainNetHg19,704 chainNetMm10,704 chainNetOryLat2,710 chainOryLat2,707 netDanRer7,701 netFr3,701 netGalGal6,701 netGasAcu1,701 netHg19,701 netMm10,701 netOryLat2,707 taken gap,130 xenoRefGene,24 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 transMapEnsemblV5,506 transMapEstV5,475 transMapRefSeqV5,475 transMapRnaV5,475 transMapV5,581 targeted transMapEnsemblV5,734 transMapEstV5,703 transMapRefSeqV5,703 transMapRnaV5,703 transMapV5,809 task mrna,108 xenoMrna,182 tatusova xenoRefGene,361 tblastn blastHg18KG,8 blastHg18KG,17 blastHg18KG,78 blastHg18KG,138 uniprot,1476 temperature augustusGene,141 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 term mrna,115 xenoMrna,189 terms mrna,159 xenoMrna,233 tetnig2 ensGene,80 transMapEnsemblV5,203 transMapEnsemblV5,662 transMapEstV5,172 transMapEstV5,631 transMapRefSeqV5,172 transMapRefSeqV5,631 transMapRnaV5,172 transMapRnaV5,631 transMapV5,278 transMapV5,737 uniprot,1816 tetnig2.ensembl.transmapv4.bigpsl transMapEnsemblV5,590 transMapEstV5,559 transMapRefSeqV5,559 transMapRnaV5,559 tetnig2.ensembl.transmapv5.bigpsl transMapV5,665 tetnig2.est.transmapv4.bigpsl transMapEnsemblV5,599 transMapEstV5,568 transMapRefSeqV5,568 transMapRnaV5,568 tetnig2.est.transmapv5.bigpsl transMapV5,674 tetnig2.fa windowmaskerSdust,62 windowmaskerSdust,71 tetnig2.refseq.transmapv4.bigpsl transMapEnsemblV5,593 transMapEnsemblV5,665 transMapEstV5,562 transMapEstV5,634 transMapRefSeqV5,562 transMapRefSeqV5,634 transMapRnaV5,562 transMapRnaV5,634 tetnig2.refseq.transmapv5.bigpsl transMapV5,668 transMapV5,740 tetnig2.rna.transmapv4.bigpsl transMapEnsemblV5,596 transMapEstV5,565 transMapRefSeqV5,565 transMapRnaV5,565 tetnig2.rna.transmapv5.bigpsl transMapV5,671 tetraodon blastHg18KG,74 blastHg18KG,83 chainDanRer7,72 chainDanRer7,98 chainDanRer7,155 chainDanRer7,201 chainDanRer7,267 chainDanRer7,274 chainDanRer7,573 chainDanRer7,625 chainFr3,72 chainFr3,98 chainFr3,155 chainFr3,201 chainFr3,267 chainFr3,274 chainFr3,573 chainFr3,625 chainGalGal6,72 chainGalGal6,98 chainGalGal6,155 chainGalGal6,201 chainGalGal6,267 chainGalGal6,274 chainGalGal6,573 chainGalGal6,625 chainGasAcu1,72 chainGasAcu1,98 chainGasAcu1,155 chainGasAcu1,201 chainGasAcu1,267 chainGasAcu1,274 chainGasAcu1,573 chainGasAcu1,625 chainHg19,72 chainHg19,98 chainHg19,155 chainHg19,201 chainHg19,267 chainHg19,274 chainHg19,573 chainHg19,625 chainMm10,72 chainMm10,98 chainMm10,155 chainMm10,201 chainMm10,267 chainMm10,274 chainMm10,573 chainMm10,625 chainNetDanRer7,75 chainNetDanRer7,101 chainNetDanRer7,158 chainNetDanRer7,204 chainNetDanRer7,270 chainNetDanRer7,277 chainNetDanRer7,576 chainNetDanRer7,628 chainNetFr3,75 chainNetFr3,101 chainNetFr3,158 chainNetFr3,204 chainNetFr3,270 chainNetFr3,277 chainNetFr3,576 chainNetFr3,628 chainNetGalGal6,75 chainNetGalGal6,101 chainNetGalGal6,158 chainNetGalGal6,204 chainNetGalGal6,270 chainNetGalGal6,277 chainNetGalGal6,576 chainNetGalGal6,628 chainNetGasAcu1,75 chainNetGasAcu1,101 chainNetGasAcu1,158 chainNetGasAcu1,204 chainNetGasAcu1,270 chainNetGasAcu1,277 chainNetGasAcu1,576 chainNetGasAcu1,628 chainNetHg19,75 chainNetHg19,101 chainNetHg19,158 chainNetHg19,204 chainNetHg19,270 chainNetHg19,277 chainNetHg19,576 chainNetHg19,628 chainNetMm10,75 chainNetMm10,101 chainNetMm10,158 chainNetMm10,204 chainNetMm10,270 chainNetMm10,277 chainNetMm10,576 chainNetMm10,628 chainNetOryLat2,79 chainNetOryLat2,105 chainNetOryLat2,162 chainNetOryLat2,208 chainNetOryLat2,274 chainNetOryLat2,281 chainNetOryLat2,582 chainNetOryLat2,634 chainOryLat2,76 chainOryLat2,102 chainOryLat2,159 chainOryLat2,205 chainOryLat2,271 chainOryLat2,278 chainOryLat2,579 chainOryLat2,631 gaze,55 gaze,108 gaze,116 gold,13 gold,135 gold,247 gold,255 gold,273 mrna,1 mrna,3 mrna,12 mrna,18 mrna,345 mrna,399 netDanRer7,72 netDanRer7,98 netDanRer7,155 netDanRer7,201 netDanRer7,267 netDanRer7,274 netDanRer7,573 netDanRer7,625 netFr3,72 netFr3,98 netFr3,155 netFr3,201 netFr3,267 netFr3,274 netFr3,573 netFr3,625 netGalGal6,72 netGalGal6,98 netGalGal6,155 netGalGal6,201 netGalGal6,267 netGalGal6,274 netGalGal6,573 netGalGal6,625 netGasAcu1,72 netGasAcu1,98 netGasAcu1,155 netGasAcu1,201 netGasAcu1,267 netGasAcu1,274 netGasAcu1,573 netGasAcu1,625 netHg19,72 netHg19,98 netHg19,155 netHg19,201 netHg19,267 netHg19,274 netHg19,573 netHg19,625 netMm10,72 netMm10,98 netMm10,155 netMm10,201 netMm10,267 netMm10,274 netMm10,573 netMm10,625 netOryLat2,76 netOryLat2,102 netOryLat2,159 netOryLat2,205 netOryLat2,271 netOryLat2,278 netOryLat2,579 netOryLat2,631 transMapEnsemblV5,90 transMapEnsemblV5,202 transMapEnsemblV5,332 transMapEstV5,59 transMapEstV5,171 transMapEstV5,301 transMapRefSeqV5,59 transMapRefSeqV5,171 transMapRefSeqV5,301 transMapRnaV5,59 transMapRnaV5,171 transMapRnaV5,301 transMapV5,60 transMapV5,277 transMapV5,407 xenoMrna,28 xenoMrna,424 xenoRefGene,23 xenoRefGene,222 text mrna,122 mrna,162 mrna,202 uniprot,1763 xenoMrna,196 xenoMrna,236 xenoMrna,276 tgap chainDanRer7,729 chainFr3,729 chainGalGal6,729 chainGasAcu1,729 chainHg19,729 chainMm10,729 chainNetDanRer7,732 chainNetFr3,732 chainNetGalGal6,732 chainNetGasAcu1,732 chainNetHg19,732 chainNetMm10,732 chainNetOryLat2,738 chainOryLat2,735 netDanRer7,729 netFr3,729 netGalGal6,729 netGasAcu1,729 netHg19,729 netMm10,729 netOryLat2,735 th transMapEnsemblV5,793 transMapEstV5,762 transMapRefSeqV5,762 transMapRnaV5,762 transMapV5,868 than blastHg18KG,106 chainDanRer7,83 chainDanRer7,506 chainFr3,83 chainFr3,506 chainGalGal6,83 chainGalGal6,506 chainGasAcu1,83 chainGasAcu1,506 chainHg19,83 chainHg19,506 chainMm10,83 chainMm10,506 chainNetDanRer7,86 chainNetDanRer7,509 chainNetFr3,86 chainNetFr3,509 chainNetGalGal6,86 chainNetGalGal6,509 chainNetGasAcu1,86 chainNetGasAcu1,509 chainNetHg19,86 chainNetHg19,509 chainNetMm10,86 chainNetMm10,509 chainNetOryLat2,90 chainNetOryLat2,515 chainOryLat2,87 chainOryLat2,512 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 gold,221 mrna,216 nestedRepeats,213 nestedRepeats,271 netDanRer7,83 netDanRer7,506 netFr3,83 netFr3,506 netGalGal6,83 netGalGal6,506 netGasAcu1,83 netGasAcu1,506 netHg19,83 netHg19,506 netMm10,83 netMm10,506 netOryLat2,87 netOryLat2,512 tRNAs,92 transMapEnsemblV5,223 transMapEnsemblV5,373 transMapEstV5,192 transMapEstV5,342 transMapRefSeqV5,192 transMapRefSeqV5,342 transMapRnaV5,192 transMapRnaV5,342 transMapV5,107 transMapV5,148 transMapV5,298 transMapV5,448 xenoMrna,27 xenoMrna,290 xenoRefGene,22 xenoRefGene,232 thank ensGene,150 thanks augustusGene,248 gaze,119 genscan,170 nestedRepeats,303 uniprot,1974 that blastHg18KG,65 blastHg18KG,116 chainDanRer7,20 chainDanRer7,45 chainDanRer7,79 chainDanRer7,139 chainDanRer7,163 chainDanRer7,365 chainDanRer7,392 chainDanRer7,414 chainDanRer7,566 chainDanRer7,822 chainDanRer7,833 chainFr3,20 chainFr3,45 chainFr3,79 chainFr3,139 chainFr3,163 chainFr3,365 chainFr3,392 chainFr3,414 chainFr3,566 chainFr3,822 chainFr3,833 chainGalGal6,20 chainGalGal6,45 chainGalGal6,79 chainGalGal6,139 chainGalGal6,163 chainGalGal6,365 chainGalGal6,392 chainGalGal6,414 chainGalGal6,566 chainGalGal6,822 chainGalGal6,833 chainGasAcu1,20 chainGasAcu1,45 chainGasAcu1,79 chainGasAcu1,139 chainGasAcu1,163 chainGasAcu1,365 chainGasAcu1,392 chainGasAcu1,414 chainGasAcu1,566 chainGasAcu1,822 chainGasAcu1,833 chainHg19,20 chainHg19,45 chainHg19,79 chainHg19,139 chainHg19,163 chainHg19,365 chainHg19,392 chainHg19,414 chainHg19,566 chainHg19,822 chainHg19,833 chainMm10,20 chainMm10,45 chainMm10,79 chainMm10,139 chainMm10,163 chainMm10,365 chainMm10,392 chainMm10,414 chainMm10,566 chainMm10,822 chainMm10,833 chainNetDanRer7,23 chainNetDanRer7,48 chainNetDanRer7,82 chainNetDanRer7,142 chainNetDanRer7,166 chainNetDanRer7,368 chainNetDanRer7,395 chainNetDanRer7,417 chainNetDanRer7,569 chainNetDanRer7,825 chainNetDanRer7,836 chainNetFr3,23 chainNetFr3,48 chainNetFr3,82 chainNetFr3,142 chainNetFr3,166 chainNetFr3,368 chainNetFr3,395 chainNetFr3,417 chainNetFr3,569 chainNetFr3,825 chainNetFr3,836 chainNetGalGal6,23 chainNetGalGal6,48 chainNetGalGal6,82 chainNetGalGal6,142 chainNetGalGal6,166 chainNetGalGal6,368 chainNetGalGal6,395 chainNetGalGal6,417 chainNetGalGal6,569 chainNetGalGal6,825 chainNetGalGal6,836 chainNetGasAcu1,23 chainNetGasAcu1,48 chainNetGasAcu1,82 chainNetGasAcu1,142 chainNetGasAcu1,166 chainNetGasAcu1,368 chainNetGasAcu1,395 chainNetGasAcu1,417 chainNetGasAcu1,569 chainNetGasAcu1,825 chainNetGasAcu1,836 chainNetHg19,23 chainNetHg19,48 chainNetHg19,82 chainNetHg19,142 chainNetHg19,166 chainNetHg19,368 chainNetHg19,395 chainNetHg19,417 chainNetHg19,569 chainNetHg19,825 chainNetHg19,836 chainNetMm10,23 chainNetMm10,48 chainNetMm10,82 chainNetMm10,142 chainNetMm10,166 chainNetMm10,368 chainNetMm10,395 chainNetMm10,417 chainNetMm10,569 chainNetMm10,825 chainNetMm10,836 chainNetOryLat2,25 chainNetOryLat2,50 chainNetOryLat2,86 chainNetOryLat2,146 chainNetOryLat2,170 chainNetOryLat2,374 chainNetOryLat2,401 chainNetOryLat2,423 chainNetOryLat2,575 chainNetOryLat2,831 chainNetOryLat2,842 chainOryLat2,22 chainOryLat2,47 chainOryLat2,83 chainOryLat2,143 chainOryLat2,167 chainOryLat2,371 chainOryLat2,398 chainOryLat2,420 chainOryLat2,572 chainOryLat2,828 chainOryLat2,839 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 gap,185 gaze,68 genscan,141 microsat,15 mrna,45 mrna,64 mrna,171 mrna,195 mrna,232 mrna,247 mrna,264 mrna,288 mrna,306 mrna,323 nestedRepeats,265 nestedRepeats,273 netDanRer7,20 netDanRer7,45 netDanRer7,79 netDanRer7,139 netDanRer7,163 netDanRer7,365 netDanRer7,392 netDanRer7,414 netDanRer7,566 netDanRer7,822 netDanRer7,833 netFr3,20 netFr3,45 netFr3,79 netFr3,139 netFr3,163 netFr3,365 netFr3,392 netFr3,414 netFr3,566 netFr3,822 netFr3,833 netGalGal6,20 netGalGal6,45 netGalGal6,79 netGalGal6,139 netGalGal6,163 netGalGal6,365 netGalGal6,392 netGalGal6,414 netGalGal6,566 netGalGal6,822 netGalGal6,833 netGasAcu1,20 netGasAcu1,45 netGasAcu1,79 netGasAcu1,139 netGasAcu1,163 netGasAcu1,365 netGasAcu1,392 netGasAcu1,414 netGasAcu1,566 netGasAcu1,822 netGasAcu1,833 netHg19,20 netHg19,45 netHg19,79 netHg19,139 netHg19,163 netHg19,365 netHg19,392 netHg19,414 netHg19,566 netHg19,822 netHg19,833 netMm10,20 netMm10,45 netMm10,79 netMm10,139 netMm10,163 netMm10,365 netMm10,392 netMm10,414 netMm10,566 netMm10,822 netMm10,833 netOryLat2,22 netOryLat2,47 netOryLat2,83 netOryLat2,143 netOryLat2,167 netOryLat2,371 netOryLat2,398 netOryLat2,420 netOryLat2,572 netOryLat2,828 netOryLat2,839 tRNAs,29 tRNAs,79 tRNAs,186 tRNAs,284 tRNAs,296 transMapEnsemblV5,117 transMapEnsemblV5,193 transMapEnsemblV5,497 transMapEstV5,86 transMapEstV5,162 transMapEstV5,466 transMapRefSeqV5,86 transMapRefSeqV5,162 transMapRefSeqV5,466 transMapRnaV5,86 transMapRnaV5,162 transMapRnaV5,466 transMapV5,192 transMapV5,268 transMapV5,572 uniprot,167 uniprot,301 uniprot,696 uniprot,734 uniprot,745 uniprot,999 uniprot,1012 uniprot,1169 uniprot,1408 uniprot,1602 uniprot,1624 uniprot,1738 uniprot,1866 xenoMrna,49 xenoMrna,138 xenoMrna,245 xenoMrna,269 xenoMrna,306 xenoMrna,321 xenoMrna,338 xenoMrna,362 xenoMrna,380 xenoMrna,397 xenoRefGene,146 the augustusGene,20 augustusGene,25 augustusGene,30 augustusGene,38 augustusGene,61 augustusGene,69 augustusGene,81 augustusGene,109 augustusGene,143 augustusGene,165 augustusGene,172 augustusGene,177 augustusGene,185 augustusGene,240 augustusGene,250 augustusGene,255 augustusGene,258 augustusGene,261 augustusGene,272 augustusGene,275 blastHg18KG,20 blastHg18KG,23 blastHg18KG,30 blastHg18KG,37 blastHg18KG,41 blastHg18KG,49 blastHg18KG,53 blastHg18KG,61 blastHg18KG,73 blastHg18KG,77 blastHg18KG,81 blastHg18KG,98 blastHg18KG,109 blastHg18KG,121 blastHg18KG,129 blastHg18KG,142 blastHg18KG,183 chainDanRer7,18 chainDanRer7,37 chainDanRer7,59 chainDanRer7,71 chainDanRer7,117 chainDanRer7,130 chainDanRer7,147 chainDanRer7,154 chainDanRer7,200 chainDanRer7,203 chainDanRer7,229 chainDanRer7,239 chainDanRer7,244 chainDanRer7,252 chainDanRer7,260 chainDanRer7,264 chainDanRer7,273 chainDanRer7,290 chainDanRer7,299 chainDanRer7,313 chainDanRer7,328 chainDanRer7,334 chainDanRer7,337 chainDanRer7,352 chainDanRer7,358 chainDanRer7,362 chainDanRer7,382 chainDanRer7,388 chainDanRer7,402 chainDanRer7,420 chainDanRer7,437 chainDanRer7,440 chainDanRer7,445 chainDanRer7,458 chainDanRer7,471 chainDanRer7,473 chainDanRer7,480 chainDanRer7,483 chainDanRer7,490 chainDanRer7,496 chainDanRer7,509 chainDanRer7,520 chainDanRer7,524 chainDanRer7,527 chainDanRer7,535 chainDanRer7,539 chainDanRer7,545 chainDanRer7,556 chainDanRer7,559 chainDanRer7,571 chainDanRer7,578 chainDanRer7,580 chainDanRer7,588 chainDanRer7,594 chainDanRer7,603 chainDanRer7,606 chainDanRer7,636 chainDanRer7,641 chainDanRer7,650 chainDanRer7,654 chainDanRer7,661 chainDanRer7,684 chainDanRer7,692 chainDanRer7,762 chainDanRer7,766 chainDanRer7,774 chainDanRer7,778 chainDanRer7,782 chainDanRer7,790 chainDanRer7,835 chainDanRer7,845 chainDanRer7,864 chainDanRer7,867 chainDanRer7,879 chainDanRer7,903 chainDanRer7,945 chainDanRer7,951 chainDanRer7,969 chainDanRer7,976 chainDanRer7,988 chainDanRer7,997 chainDanRer7,1018 chainDanRer7,1058 chainFr3,18 chainFr3,37 chainFr3,59 chainFr3,71 chainFr3,117 chainFr3,130 chainFr3,147 chainFr3,154 chainFr3,200 chainFr3,203 chainFr3,229 chainFr3,239 chainFr3,244 chainFr3,252 chainFr3,260 chainFr3,264 chainFr3,273 chainFr3,290 chainFr3,299 chainFr3,313 chainFr3,328 chainFr3,334 chainFr3,337 chainFr3,352 chainFr3,358 chainFr3,362 chainFr3,382 chainFr3,388 chainFr3,402 chainFr3,420 chainFr3,437 chainFr3,440 chainFr3,445 chainFr3,458 chainFr3,471 chainFr3,473 chainFr3,480 chainFr3,483 chainFr3,490 chainFr3,496 chainFr3,509 chainFr3,520 chainFr3,524 chainFr3,527 chainFr3,535 chainFr3,539 chainFr3,545 chainFr3,556 chainFr3,559 chainFr3,571 chainFr3,578 chainFr3,580 chainFr3,588 chainFr3,594 chainFr3,603 chainFr3,606 chainFr3,636 chainFr3,641 chainFr3,650 chainFr3,654 chainFr3,661 chainFr3,684 chainFr3,692 chainFr3,762 chainFr3,766 chainFr3,774 chainFr3,778 chainFr3,782 chainFr3,790 chainFr3,835 chainFr3,845 chainFr3,864 chainFr3,867 chainFr3,879 chainFr3,903 chainFr3,945 chainFr3,951 chainFr3,969 chainFr3,976 chainFr3,988 chainFr3,997 chainFr3,1018 chainFr3,1058 chainGalGal6,18 chainGalGal6,37 chainGalGal6,59 chainGalGal6,71 chainGalGal6,117 chainGalGal6,130 chainGalGal6,147 chainGalGal6,154 chainGalGal6,200 chainGalGal6,203 chainGalGal6,229 chainGalGal6,239 chainGalGal6,244 chainGalGal6,252 chainGalGal6,260 chainGalGal6,264 chainGalGal6,273 chainGalGal6,290 chainGalGal6,299 chainGalGal6,313 chainGalGal6,328 chainGalGal6,334 chainGalGal6,337 chainGalGal6,352 chainGalGal6,358 chainGalGal6,362 chainGalGal6,382 chainGalGal6,388 chainGalGal6,402 chainGalGal6,420 chainGalGal6,437 chainGalGal6,440 chainGalGal6,445 chainGalGal6,458 chainGalGal6,471 chainGalGal6,473 chainGalGal6,480 chainGalGal6,483 chainGalGal6,490 chainGalGal6,496 chainGalGal6,509 chainGalGal6,520 chainGalGal6,524 chainGalGal6,527 chainGalGal6,535 chainGalGal6,539 chainGalGal6,545 chainGalGal6,556 chainGalGal6,559 chainGalGal6,571 chainGalGal6,578 chainGalGal6,580 chainGalGal6,588 chainGalGal6,594 chainGalGal6,603 chainGalGal6,606 chainGalGal6,636 chainGalGal6,641 chainGalGal6,650 chainGalGal6,654 chainGalGal6,661 chainGalGal6,684 chainGalGal6,692 chainGalGal6,762 chainGalGal6,766 chainGalGal6,774 chainGalGal6,778 chainGalGal6,782 chainGalGal6,790 chainGalGal6,835 chainGalGal6,845 chainGalGal6,864 chainGalGal6,867 chainGalGal6,879 chainGalGal6,903 chainGalGal6,945 chainGalGal6,951 chainGalGal6,969 chainGalGal6,976 chainGalGal6,988 chainGalGal6,997 chainGalGal6,1018 chainGalGal6,1058 chainGasAcu1,18 chainGasAcu1,37 chainGasAcu1,59 chainGasAcu1,71 chainGasAcu1,117 chainGasAcu1,130 chainGasAcu1,147 chainGasAcu1,154 chainGasAcu1,200 chainGasAcu1,203 chainGasAcu1,229 chainGasAcu1,239 chainGasAcu1,244 chainGasAcu1,252 chainGasAcu1,260 chainGasAcu1,264 chainGasAcu1,273 chainGasAcu1,290 chainGasAcu1,299 chainGasAcu1,313 chainGasAcu1,328 chainGasAcu1,334 chainGasAcu1,337 chainGasAcu1,352 chainGasAcu1,358 chainGasAcu1,362 chainGasAcu1,382 chainGasAcu1,388 chainGasAcu1,402 chainGasAcu1,420 chainGasAcu1,437 chainGasAcu1,440 chainGasAcu1,445 chainGasAcu1,458 chainGasAcu1,471 chainGasAcu1,473 chainGasAcu1,480 chainGasAcu1,483 chainGasAcu1,490 chainGasAcu1,496 chainGasAcu1,509 chainGasAcu1,520 chainGasAcu1,524 chainGasAcu1,527 chainGasAcu1,535 chainGasAcu1,539 chainGasAcu1,545 chainGasAcu1,556 chainGasAcu1,559 chainGasAcu1,571 chainGasAcu1,578 chainGasAcu1,580 chainGasAcu1,588 chainGasAcu1,594 chainGasAcu1,603 chainGasAcu1,606 chainGasAcu1,636 chainGasAcu1,641 chainGasAcu1,650 chainGasAcu1,654 chainGasAcu1,661 chainGasAcu1,684 chainGasAcu1,692 chainGasAcu1,762 chainGasAcu1,766 chainGasAcu1,774 chainGasAcu1,778 chainGasAcu1,782 chainGasAcu1,790 chainGasAcu1,835 chainGasAcu1,845 chainGasAcu1,864 chainGasAcu1,867 chainGasAcu1,879 chainGasAcu1,903 chainGasAcu1,945 chainGasAcu1,951 chainGasAcu1,969 chainGasAcu1,976 chainGasAcu1,988 chainGasAcu1,997 chainGasAcu1,1018 chainGasAcu1,1058 chainHg19,18 chainHg19,37 chainHg19,59 chainHg19,71 chainHg19,117 chainHg19,130 chainHg19,147 chainHg19,154 chainHg19,200 chainHg19,203 chainHg19,229 chainHg19,239 chainHg19,244 chainHg19,252 chainHg19,260 chainHg19,264 chainHg19,273 chainHg19,290 chainHg19,299 chainHg19,313 chainHg19,328 chainHg19,334 chainHg19,337 chainHg19,352 chainHg19,358 chainHg19,362 chainHg19,382 chainHg19,388 chainHg19,402 chainHg19,420 chainHg19,437 chainHg19,440 chainHg19,445 chainHg19,458 chainHg19,471 chainHg19,473 chainHg19,480 chainHg19,483 chainHg19,490 chainHg19,496 chainHg19,509 chainHg19,520 chainHg19,524 chainHg19,527 chainHg19,535 chainHg19,539 chainHg19,545 chainHg19,556 chainHg19,559 chainHg19,571 chainHg19,578 chainHg19,580 chainHg19,588 chainHg19,594 chainHg19,603 chainHg19,606 chainHg19,636 chainHg19,641 chainHg19,650 chainHg19,654 chainHg19,661 chainHg19,684 chainHg19,692 chainHg19,762 chainHg19,766 chainHg19,774 chainHg19,778 chainHg19,782 chainHg19,790 chainHg19,835 chainHg19,845 chainHg19,864 chainHg19,867 chainHg19,879 chainHg19,903 chainHg19,945 chainHg19,951 chainHg19,969 chainHg19,976 chainHg19,988 chainHg19,997 chainHg19,1018 chainHg19,1058 chainMm10,18 chainMm10,37 chainMm10,59 chainMm10,71 chainMm10,117 chainMm10,130 chainMm10,147 chainMm10,154 chainMm10,200 chainMm10,203 chainMm10,229 chainMm10,239 chainMm10,244 chainMm10,252 chainMm10,260 chainMm10,264 chainMm10,273 chainMm10,290 chainMm10,299 chainMm10,313 chainMm10,328 chainMm10,334 chainMm10,337 chainMm10,352 chainMm10,358 chainMm10,362 chainMm10,382 chainMm10,388 chainMm10,402 chainMm10,420 chainMm10,437 chainMm10,440 chainMm10,445 chainMm10,458 chainMm10,471 chainMm10,473 chainMm10,480 chainMm10,483 chainMm10,490 chainMm10,496 chainMm10,509 chainMm10,520 chainMm10,524 chainMm10,527 chainMm10,535 chainMm10,539 chainMm10,545 chainMm10,556 chainMm10,559 chainMm10,571 chainMm10,578 chainMm10,580 chainMm10,588 chainMm10,594 chainMm10,603 chainMm10,606 chainMm10,636 chainMm10,641 chainMm10,650 chainMm10,654 chainMm10,661 chainMm10,684 chainMm10,692 chainMm10,762 chainMm10,766 chainMm10,774 chainMm10,778 chainMm10,782 chainMm10,790 chainMm10,835 chainMm10,845 chainMm10,864 chainMm10,867 chainMm10,879 chainMm10,903 chainMm10,945 chainMm10,951 chainMm10,969 chainMm10,976 chainMm10,988 chainMm10,997 chainMm10,1018 chainMm10,1058 chainNetDanRer7,21 chainNetDanRer7,40 chainNetDanRer7,62 chainNetDanRer7,74 chainNetDanRer7,120 chainNetDanRer7,133 chainNetDanRer7,150 chainNetDanRer7,157 chainNetDanRer7,203 chainNetDanRer7,206 chainNetDanRer7,232 chainNetDanRer7,242 chainNetDanRer7,247 chainNetDanRer7,255 chainNetDanRer7,263 chainNetDanRer7,267 chainNetDanRer7,276 chainNetDanRer7,293 chainNetDanRer7,302 chainNetDanRer7,316 chainNetDanRer7,331 chainNetDanRer7,337 chainNetDanRer7,340 chainNetDanRer7,355 chainNetDanRer7,361 chainNetDanRer7,365 chainNetDanRer7,385 chainNetDanRer7,391 chainNetDanRer7,405 chainNetDanRer7,423 chainNetDanRer7,440 chainNetDanRer7,443 chainNetDanRer7,448 chainNetDanRer7,461 chainNetDanRer7,474 chainNetDanRer7,476 chainNetDanRer7,483 chainNetDanRer7,486 chainNetDanRer7,493 chainNetDanRer7,499 chainNetDanRer7,512 chainNetDanRer7,523 chainNetDanRer7,527 chainNetDanRer7,530 chainNetDanRer7,538 chainNetDanRer7,542 chainNetDanRer7,548 chainNetDanRer7,559 chainNetDanRer7,562 chainNetDanRer7,574 chainNetDanRer7,581 chainNetDanRer7,583 chainNetDanRer7,591 chainNetDanRer7,597 chainNetDanRer7,606 chainNetDanRer7,609 chainNetDanRer7,639 chainNetDanRer7,644 chainNetDanRer7,653 chainNetDanRer7,657 chainNetDanRer7,664 chainNetDanRer7,687 chainNetDanRer7,695 chainNetDanRer7,765 chainNetDanRer7,769 chainNetDanRer7,777 chainNetDanRer7,781 chainNetDanRer7,785 chainNetDanRer7,793 chainNetDanRer7,838 chainNetDanRer7,848 chainNetDanRer7,867 chainNetDanRer7,870 chainNetDanRer7,882 chainNetDanRer7,906 chainNetDanRer7,948 chainNetDanRer7,954 chainNetDanRer7,972 chainNetDanRer7,979 chainNetDanRer7,991 chainNetDanRer7,1000 chainNetDanRer7,1021 chainNetDanRer7,1061 chainNetFr3,21 chainNetFr3,40 chainNetFr3,62 chainNetFr3,74 chainNetFr3,120 chainNetFr3,133 chainNetFr3,150 chainNetFr3,157 chainNetFr3,203 chainNetFr3,206 chainNetFr3,232 chainNetFr3,242 chainNetFr3,247 chainNetFr3,255 chainNetFr3,263 chainNetFr3,267 chainNetFr3,276 chainNetFr3,293 chainNetFr3,302 chainNetFr3,316 chainNetFr3,331 chainNetFr3,337 chainNetFr3,340 chainNetFr3,355 chainNetFr3,361 chainNetFr3,365 chainNetFr3,385 chainNetFr3,391 chainNetFr3,405 chainNetFr3,423 chainNetFr3,440 chainNetFr3,443 chainNetFr3,448 chainNetFr3,461 chainNetFr3,474 chainNetFr3,476 chainNetFr3,483 chainNetFr3,486 chainNetFr3,493 chainNetFr3,499 chainNetFr3,512 chainNetFr3,523 chainNetFr3,527 chainNetFr3,530 chainNetFr3,538 chainNetFr3,542 chainNetFr3,548 chainNetFr3,559 chainNetFr3,562 chainNetFr3,574 chainNetFr3,581 chainNetFr3,583 chainNetFr3,591 chainNetFr3,597 chainNetFr3,606 chainNetFr3,609 chainNetFr3,639 chainNetFr3,644 chainNetFr3,653 chainNetFr3,657 chainNetFr3,664 chainNetFr3,687 chainNetFr3,695 chainNetFr3,765 chainNetFr3,769 chainNetFr3,777 chainNetFr3,781 chainNetFr3,785 chainNetFr3,793 chainNetFr3,838 chainNetFr3,848 chainNetFr3,867 chainNetFr3,870 chainNetFr3,882 chainNetFr3,906 chainNetFr3,948 chainNetFr3,954 chainNetFr3,972 chainNetFr3,979 chainNetFr3,991 chainNetFr3,1000 chainNetFr3,1021 chainNetFr3,1061 chainNetGalGal6,21 chainNetGalGal6,40 chainNetGalGal6,62 chainNetGalGal6,74 chainNetGalGal6,120 chainNetGalGal6,133 chainNetGalGal6,150 chainNetGalGal6,157 chainNetGalGal6,203 chainNetGalGal6,206 chainNetGalGal6,232 chainNetGalGal6,242 chainNetGalGal6,247 chainNetGalGal6,255 chainNetGalGal6,263 chainNetGalGal6,267 chainNetGalGal6,276 chainNetGalGal6,293 chainNetGalGal6,302 chainNetGalGal6,316 chainNetGalGal6,331 chainNetGalGal6,337 chainNetGalGal6,340 chainNetGalGal6,355 chainNetGalGal6,361 chainNetGalGal6,365 chainNetGalGal6,385 chainNetGalGal6,391 chainNetGalGal6,405 chainNetGalGal6,423 chainNetGalGal6,440 chainNetGalGal6,443 chainNetGalGal6,448 chainNetGalGal6,461 chainNetGalGal6,474 chainNetGalGal6,476 chainNetGalGal6,483 chainNetGalGal6,486 chainNetGalGal6,493 chainNetGalGal6,499 chainNetGalGal6,512 chainNetGalGal6,523 chainNetGalGal6,527 chainNetGalGal6,530 chainNetGalGal6,538 chainNetGalGal6,542 chainNetGalGal6,548 chainNetGalGal6,559 chainNetGalGal6,562 chainNetGalGal6,574 chainNetGalGal6,581 chainNetGalGal6,583 chainNetGalGal6,591 chainNetGalGal6,597 chainNetGalGal6,606 chainNetGalGal6,609 chainNetGalGal6,639 chainNetGalGal6,644 chainNetGalGal6,653 chainNetGalGal6,657 chainNetGalGal6,664 chainNetGalGal6,687 chainNetGalGal6,695 chainNetGalGal6,765 chainNetGalGal6,769 chainNetGalGal6,777 chainNetGalGal6,781 chainNetGalGal6,785 chainNetGalGal6,793 chainNetGalGal6,838 chainNetGalGal6,848 chainNetGalGal6,867 chainNetGalGal6,870 chainNetGalGal6,882 chainNetGalGal6,906 chainNetGalGal6,948 chainNetGalGal6,954 chainNetGalGal6,972 chainNetGalGal6,979 chainNetGalGal6,991 chainNetGalGal6,1000 chainNetGalGal6,1021 chainNetGalGal6,1061 chainNetGasAcu1,21 chainNetGasAcu1,40 chainNetGasAcu1,62 chainNetGasAcu1,74 chainNetGasAcu1,120 chainNetGasAcu1,133 chainNetGasAcu1,150 chainNetGasAcu1,157 chainNetGasAcu1,203 chainNetGasAcu1,206 chainNetGasAcu1,232 chainNetGasAcu1,242 chainNetGasAcu1,247 chainNetGasAcu1,255 chainNetGasAcu1,263 chainNetGasAcu1,267 chainNetGasAcu1,276 chainNetGasAcu1,293 chainNetGasAcu1,302 chainNetGasAcu1,316 chainNetGasAcu1,331 chainNetGasAcu1,337 chainNetGasAcu1,340 chainNetGasAcu1,355 chainNetGasAcu1,361 chainNetGasAcu1,365 chainNetGasAcu1,385 chainNetGasAcu1,391 chainNetGasAcu1,405 chainNetGasAcu1,423 chainNetGasAcu1,440 chainNetGasAcu1,443 chainNetGasAcu1,448 chainNetGasAcu1,461 chainNetGasAcu1,474 chainNetGasAcu1,476 chainNetGasAcu1,483 chainNetGasAcu1,486 chainNetGasAcu1,493 chainNetGasAcu1,499 chainNetGasAcu1,512 chainNetGasAcu1,523 chainNetGasAcu1,527 chainNetGasAcu1,530 chainNetGasAcu1,538 chainNetGasAcu1,542 chainNetGasAcu1,548 chainNetGasAcu1,559 chainNetGasAcu1,562 chainNetGasAcu1,574 chainNetGasAcu1,581 chainNetGasAcu1,583 chainNetGasAcu1,591 chainNetGasAcu1,597 chainNetGasAcu1,606 chainNetGasAcu1,609 chainNetGasAcu1,639 chainNetGasAcu1,644 chainNetGasAcu1,653 chainNetGasAcu1,657 chainNetGasAcu1,664 chainNetGasAcu1,687 chainNetGasAcu1,695 chainNetGasAcu1,765 chainNetGasAcu1,769 chainNetGasAcu1,777 chainNetGasAcu1,781 chainNetGasAcu1,785 chainNetGasAcu1,793 chainNetGasAcu1,838 chainNetGasAcu1,848 chainNetGasAcu1,867 chainNetGasAcu1,870 chainNetGasAcu1,882 chainNetGasAcu1,906 chainNetGasAcu1,948 chainNetGasAcu1,954 chainNetGasAcu1,972 chainNetGasAcu1,979 chainNetGasAcu1,991 chainNetGasAcu1,1000 chainNetGasAcu1,1021 chainNetGasAcu1,1061 chainNetHg19,21 chainNetHg19,40 chainNetHg19,62 chainNetHg19,74 chainNetHg19,120 chainNetHg19,133 chainNetHg19,150 chainNetHg19,157 chainNetHg19,203 chainNetHg19,206 chainNetHg19,232 chainNetHg19,242 chainNetHg19,247 chainNetHg19,255 chainNetHg19,263 chainNetHg19,267 chainNetHg19,276 chainNetHg19,293 chainNetHg19,302 chainNetHg19,316 chainNetHg19,331 chainNetHg19,337 chainNetHg19,340 chainNetHg19,355 chainNetHg19,361 chainNetHg19,365 chainNetHg19,385 chainNetHg19,391 chainNetHg19,405 chainNetHg19,423 chainNetHg19,440 chainNetHg19,443 chainNetHg19,448 chainNetHg19,461 chainNetHg19,474 chainNetHg19,476 chainNetHg19,483 chainNetHg19,486 chainNetHg19,493 chainNetHg19,499 chainNetHg19,512 chainNetHg19,523 chainNetHg19,527 chainNetHg19,530 chainNetHg19,538 chainNetHg19,542 chainNetHg19,548 chainNetHg19,559 chainNetHg19,562 chainNetHg19,574 chainNetHg19,581 chainNetHg19,583 chainNetHg19,591 chainNetHg19,597 chainNetHg19,606 chainNetHg19,609 chainNetHg19,639 chainNetHg19,644 chainNetHg19,653 chainNetHg19,657 chainNetHg19,664 chainNetHg19,687 chainNetHg19,695 chainNetHg19,765 chainNetHg19,769 chainNetHg19,777 chainNetHg19,781 chainNetHg19,785 chainNetHg19,793 chainNetHg19,838 chainNetHg19,848 chainNetHg19,867 chainNetHg19,870 chainNetHg19,882 chainNetHg19,906 chainNetHg19,948 chainNetHg19,954 chainNetHg19,972 chainNetHg19,979 chainNetHg19,991 chainNetHg19,1000 chainNetHg19,1021 chainNetHg19,1061 chainNetMm10,21 chainNetMm10,40 chainNetMm10,62 chainNetMm10,74 chainNetMm10,120 chainNetMm10,133 chainNetMm10,150 chainNetMm10,157 chainNetMm10,203 chainNetMm10,206 chainNetMm10,232 chainNetMm10,242 chainNetMm10,247 chainNetMm10,255 chainNetMm10,263 chainNetMm10,267 chainNetMm10,276 chainNetMm10,293 chainNetMm10,302 chainNetMm10,316 chainNetMm10,331 chainNetMm10,337 chainNetMm10,340 chainNetMm10,355 chainNetMm10,361 chainNetMm10,365 chainNetMm10,385 chainNetMm10,391 chainNetMm10,405 chainNetMm10,423 chainNetMm10,440 chainNetMm10,443 chainNetMm10,448 chainNetMm10,461 chainNetMm10,474 chainNetMm10,476 chainNetMm10,483 chainNetMm10,486 chainNetMm10,493 chainNetMm10,499 chainNetMm10,512 chainNetMm10,523 chainNetMm10,527 chainNetMm10,530 chainNetMm10,538 chainNetMm10,542 chainNetMm10,548 chainNetMm10,559 chainNetMm10,562 chainNetMm10,574 chainNetMm10,581 chainNetMm10,583 chainNetMm10,591 chainNetMm10,597 chainNetMm10,606 chainNetMm10,609 chainNetMm10,639 chainNetMm10,644 chainNetMm10,653 chainNetMm10,657 chainNetMm10,664 chainNetMm10,687 chainNetMm10,695 chainNetMm10,765 chainNetMm10,769 chainNetMm10,777 chainNetMm10,781 chainNetMm10,785 chainNetMm10,793 chainNetMm10,838 chainNetMm10,848 chainNetMm10,867 chainNetMm10,870 chainNetMm10,882 chainNetMm10,906 chainNetMm10,948 chainNetMm10,954 chainNetMm10,972 chainNetMm10,979 chainNetMm10,991 chainNetMm10,1000 chainNetMm10,1021 chainNetMm10,1061 chainNetOryLat2,23 chainNetOryLat2,42 chainNetOryLat2,64 chainNetOryLat2,78 chainNetOryLat2,124 chainNetOryLat2,137 chainNetOryLat2,154 chainNetOryLat2,161 chainNetOryLat2,207 chainNetOryLat2,210 chainNetOryLat2,236 chainNetOryLat2,246 chainNetOryLat2,251 chainNetOryLat2,259 chainNetOryLat2,267 chainNetOryLat2,271 chainNetOryLat2,280 chainNetOryLat2,297 chainNetOryLat2,306 chainNetOryLat2,322 chainNetOryLat2,337 chainNetOryLat2,343 chainNetOryLat2,346 chainNetOryLat2,361 chainNetOryLat2,367 chainNetOryLat2,371 chainNetOryLat2,391 chainNetOryLat2,397 chainNetOryLat2,411 chainNetOryLat2,429 chainNetOryLat2,446 chainNetOryLat2,449 chainNetOryLat2,454 chainNetOryLat2,467 chainNetOryLat2,480 chainNetOryLat2,482 chainNetOryLat2,489 chainNetOryLat2,492 chainNetOryLat2,499 chainNetOryLat2,505 chainNetOryLat2,518 chainNetOryLat2,529 chainNetOryLat2,533 chainNetOryLat2,536 chainNetOryLat2,544 chainNetOryLat2,548 chainNetOryLat2,554 chainNetOryLat2,565 chainNetOryLat2,568 chainNetOryLat2,580 chainNetOryLat2,587 chainNetOryLat2,589 chainNetOryLat2,597 chainNetOryLat2,603 chainNetOryLat2,612 chainNetOryLat2,615 chainNetOryLat2,645 chainNetOryLat2,650 chainNetOryLat2,659 chainNetOryLat2,663 chainNetOryLat2,670 chainNetOryLat2,693 chainNetOryLat2,701 chainNetOryLat2,771 chainNetOryLat2,775 chainNetOryLat2,783 chainNetOryLat2,787 chainNetOryLat2,791 chainNetOryLat2,799 chainNetOryLat2,844 chainNetOryLat2,854 chainNetOryLat2,873 chainNetOryLat2,876 chainNetOryLat2,888 chainNetOryLat2,912 chainNetOryLat2,954 chainNetOryLat2,960 chainNetOryLat2,978 chainNetOryLat2,985 chainNetOryLat2,997 chainNetOryLat2,1006 chainNetOryLat2,1027 chainNetOryLat2,1067 chainOryLat2,20 chainOryLat2,39 chainOryLat2,61 chainOryLat2,75 chainOryLat2,121 chainOryLat2,134 chainOryLat2,151 chainOryLat2,158 chainOryLat2,204 chainOryLat2,207 chainOryLat2,233 chainOryLat2,243 chainOryLat2,248 chainOryLat2,256 chainOryLat2,264 chainOryLat2,268 chainOryLat2,277 chainOryLat2,294 chainOryLat2,303 chainOryLat2,319 chainOryLat2,334 chainOryLat2,340 chainOryLat2,343 chainOryLat2,358 chainOryLat2,364 chainOryLat2,368 chainOryLat2,388 chainOryLat2,394 chainOryLat2,408 chainOryLat2,426 chainOryLat2,443 chainOryLat2,446 chainOryLat2,451 chainOryLat2,464 chainOryLat2,477 chainOryLat2,479 chainOryLat2,486 chainOryLat2,489 chainOryLat2,496 chainOryLat2,502 chainOryLat2,515 chainOryLat2,526 chainOryLat2,530 chainOryLat2,533 chainOryLat2,541 chainOryLat2,545 chainOryLat2,551 chainOryLat2,562 chainOryLat2,565 chainOryLat2,577 chainOryLat2,584 chainOryLat2,586 chainOryLat2,594 chainOryLat2,600 chainOryLat2,609 chainOryLat2,612 chainOryLat2,642 chainOryLat2,647 chainOryLat2,656 chainOryLat2,660 chainOryLat2,667 chainOryLat2,690 chainOryLat2,698 chainOryLat2,768 chainOryLat2,772 chainOryLat2,780 chainOryLat2,784 chainOryLat2,788 chainOryLat2,796 chainOryLat2,841 chainOryLat2,851 chainOryLat2,870 chainOryLat2,873 chainOryLat2,885 chainOryLat2,909 chainOryLat2,951 chainOryLat2,957 chainOryLat2,975 chainOryLat2,982 chainOryLat2,994 chainOryLat2,1003 chainOryLat2,1024 chainOryLat2,1064 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 ensGene,21 ensGene,34 ensGene,51 ensGene,65 ensGene,69 ensGene,75 ensGene,101 ensGene,107 ensGene,190 gap,13 gap,25 gap,31 gap,37 gap,57 gap,61 gap,66 gap,75 gap,106 gap,123 gap,141 gap,153 gap,175 gap,183 gap,189 gaze,20 gaze,62 gaze,66 gaze,84 gaze,115 gc5Base,12 gc5Base,17 gc5Base,53 gc5Base,57 gc5Base,68 gc5Base,72 genscan,16 genscan,23 genscan,38 genscan,53 genscan,68 genscan,75 genscan,80 genscan,91 genscan,115 genscan,135 genscan,139 genscan,151 genscan,155 genscan,176 gold,12 gold,24 gold,47 gold,64 gold,67 gold,70 gold,76 gold,84 gold,96 gold,102 gold,108 gold,114 gold,117 gold,128 gold,130 gold,134 gold,181 gold,195 gold,215 gold,224 gold,237 gold,243 gold,246 gold,254 gold,272 gold,277 gold,288 gold,294 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 mrna,11 mrna,23 mrna,32 mrna,43 mrna,55 mrna,70 mrna,74 mrna,84 mrna,96 mrna,106 mrna,111 mrna,121 mrna,126 mrna,133 mrna,144 mrna,147 mrna,150 mrna,155 mrna,165 mrna,168 mrna,174 mrna,184 mrna,191 mrna,200 mrna,210 mrna,220 mrna,252 mrna,259 mrna,273 mrna,282 mrna,290 mrna,299 mrna,308 mrna,325 mrna,332 mrna,350 mrna,353 mrna,364 mrna,367 mrna,383 mrna,392 mrna,398 mrna,412 mrna,450 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 netDanRer7,18 netDanRer7,37 netDanRer7,59 netDanRer7,71 netDanRer7,117 netDanRer7,130 netDanRer7,147 netDanRer7,154 netDanRer7,200 netDanRer7,203 netDanRer7,229 netDanRer7,239 netDanRer7,244 netDanRer7,252 netDanRer7,260 netDanRer7,264 netDanRer7,273 netDanRer7,290 netDanRer7,299 netDanRer7,313 netDanRer7,328 netDanRer7,334 netDanRer7,337 netDanRer7,352 netDanRer7,358 netDanRer7,362 netDanRer7,382 netDanRer7,388 netDanRer7,402 netDanRer7,420 netDanRer7,437 netDanRer7,440 netDanRer7,445 netDanRer7,458 netDanRer7,471 netDanRer7,473 netDanRer7,480 netDanRer7,483 netDanRer7,490 netDanRer7,496 netDanRer7,509 netDanRer7,520 netDanRer7,524 netDanRer7,527 netDanRer7,535 netDanRer7,539 netDanRer7,545 netDanRer7,556 netDanRer7,559 netDanRer7,571 netDanRer7,578 netDanRer7,580 netDanRer7,588 netDanRer7,594 netDanRer7,603 netDanRer7,606 netDanRer7,636 netDanRer7,641 netDanRer7,650 netDanRer7,654 netDanRer7,661 netDanRer7,684 netDanRer7,692 netDanRer7,762 netDanRer7,766 netDanRer7,774 netDanRer7,778 netDanRer7,782 netDanRer7,790 netDanRer7,835 netDanRer7,845 netDanRer7,864 netDanRer7,867 netDanRer7,879 netDanRer7,903 netDanRer7,945 netDanRer7,951 netDanRer7,969 netDanRer7,976 netDanRer7,988 netDanRer7,997 netDanRer7,1018 netDanRer7,1058 netFr3,18 netFr3,37 netFr3,59 netFr3,71 netFr3,117 netFr3,130 netFr3,147 netFr3,154 netFr3,200 netFr3,203 netFr3,229 netFr3,239 netFr3,244 netFr3,252 netFr3,260 netFr3,264 netFr3,273 netFr3,290 netFr3,299 netFr3,313 netFr3,328 netFr3,334 netFr3,337 netFr3,352 netFr3,358 netFr3,362 netFr3,382 netFr3,388 netFr3,402 netFr3,420 netFr3,437 netFr3,440 netFr3,445 netFr3,458 netFr3,471 netFr3,473 netFr3,480 netFr3,483 netFr3,490 netFr3,496 netFr3,509 netFr3,520 netFr3,524 netFr3,527 netFr3,535 netFr3,539 netFr3,545 netFr3,556 netFr3,559 netFr3,571 netFr3,578 netFr3,580 netFr3,588 netFr3,594 netFr3,603 netFr3,606 netFr3,636 netFr3,641 netFr3,650 netFr3,654 netFr3,661 netFr3,684 netFr3,692 netFr3,762 netFr3,766 netFr3,774 netFr3,778 netFr3,782 netFr3,790 netFr3,835 netFr3,845 netFr3,864 netFr3,867 netFr3,879 netFr3,903 netFr3,945 netFr3,951 netFr3,969 netFr3,976 netFr3,988 netFr3,997 netFr3,1018 netFr3,1058 netGalGal6,18 netGalGal6,37 netGalGal6,59 netGalGal6,71 netGalGal6,117 netGalGal6,130 netGalGal6,147 netGalGal6,154 netGalGal6,200 netGalGal6,203 netGalGal6,229 netGalGal6,239 netGalGal6,244 netGalGal6,252 netGalGal6,260 netGalGal6,264 netGalGal6,273 netGalGal6,290 netGalGal6,299 netGalGal6,313 netGalGal6,328 netGalGal6,334 netGalGal6,337 netGalGal6,352 netGalGal6,358 netGalGal6,362 netGalGal6,382 netGalGal6,388 netGalGal6,402 netGalGal6,420 netGalGal6,437 netGalGal6,440 netGalGal6,445 netGalGal6,458 netGalGal6,471 netGalGal6,473 netGalGal6,480 netGalGal6,483 netGalGal6,490 netGalGal6,496 netGalGal6,509 netGalGal6,520 netGalGal6,524 netGalGal6,527 netGalGal6,535 netGalGal6,539 netGalGal6,545 netGalGal6,556 netGalGal6,559 netGalGal6,571 netGalGal6,578 netGalGal6,580 netGalGal6,588 netGalGal6,594 netGalGal6,603 netGalGal6,606 netGalGal6,636 netGalGal6,641 netGalGal6,650 netGalGal6,654 netGalGal6,661 netGalGal6,684 netGalGal6,692 netGalGal6,762 netGalGal6,766 netGalGal6,774 netGalGal6,778 netGalGal6,782 netGalGal6,790 netGalGal6,835 netGalGal6,845 netGalGal6,864 netGalGal6,867 netGalGal6,879 netGalGal6,903 netGalGal6,945 netGalGal6,951 netGalGal6,969 netGalGal6,976 netGalGal6,988 netGalGal6,997 netGalGal6,1018 netGalGal6,1058 netGasAcu1,18 netGasAcu1,37 netGasAcu1,59 netGasAcu1,71 netGasAcu1,117 netGasAcu1,130 netGasAcu1,147 netGasAcu1,154 netGasAcu1,200 netGasAcu1,203 netGasAcu1,229 netGasAcu1,239 netGasAcu1,244 netGasAcu1,252 netGasAcu1,260 netGasAcu1,264 netGasAcu1,273 netGasAcu1,290 netGasAcu1,299 netGasAcu1,313 netGasAcu1,328 netGasAcu1,334 netGasAcu1,337 netGasAcu1,352 netGasAcu1,358 netGasAcu1,362 netGasAcu1,382 netGasAcu1,388 netGasAcu1,402 netGasAcu1,420 netGasAcu1,437 netGasAcu1,440 netGasAcu1,445 netGasAcu1,458 netGasAcu1,471 netGasAcu1,473 netGasAcu1,480 netGasAcu1,483 netGasAcu1,490 netGasAcu1,496 netGasAcu1,509 netGasAcu1,520 netGasAcu1,524 netGasAcu1,527 netGasAcu1,535 netGasAcu1,539 netGasAcu1,545 netGasAcu1,556 netGasAcu1,559 netGasAcu1,571 netGasAcu1,578 netGasAcu1,580 netGasAcu1,588 netGasAcu1,594 netGasAcu1,603 netGasAcu1,606 netGasAcu1,636 netGasAcu1,641 netGasAcu1,650 netGasAcu1,654 netGasAcu1,661 netGasAcu1,684 netGasAcu1,692 netGasAcu1,762 netGasAcu1,766 netGasAcu1,774 netGasAcu1,778 netGasAcu1,782 netGasAcu1,790 netGasAcu1,835 netGasAcu1,845 netGasAcu1,864 netGasAcu1,867 netGasAcu1,879 netGasAcu1,903 netGasAcu1,945 netGasAcu1,951 netGasAcu1,969 netGasAcu1,976 netGasAcu1,988 netGasAcu1,997 netGasAcu1,1018 netGasAcu1,1058 netHg19,18 netHg19,37 netHg19,59 netHg19,71 netHg19,117 netHg19,130 netHg19,147 netHg19,154 netHg19,200 netHg19,203 netHg19,229 netHg19,239 netHg19,244 netHg19,252 netHg19,260 netHg19,264 netHg19,273 netHg19,290 netHg19,299 netHg19,313 netHg19,328 netHg19,334 netHg19,337 netHg19,352 netHg19,358 netHg19,362 netHg19,382 netHg19,388 netHg19,402 netHg19,420 netHg19,437 netHg19,440 netHg19,445 netHg19,458 netHg19,471 netHg19,473 netHg19,480 netHg19,483 netHg19,490 netHg19,496 netHg19,509 netHg19,520 netHg19,524 netHg19,527 netHg19,535 netHg19,539 netHg19,545 netHg19,556 netHg19,559 netHg19,571 netHg19,578 netHg19,580 netHg19,588 netHg19,594 netHg19,603 netHg19,606 netHg19,636 netHg19,641 netHg19,650 netHg19,654 netHg19,661 netHg19,684 netHg19,692 netHg19,762 netHg19,766 netHg19,774 netHg19,778 netHg19,782 netHg19,790 netHg19,835 netHg19,845 netHg19,864 netHg19,867 netHg19,879 netHg19,903 netHg19,945 netHg19,951 netHg19,969 netHg19,976 netHg19,988 netHg19,997 netHg19,1018 netHg19,1058 netMm10,18 netMm10,37 netMm10,59 netMm10,71 netMm10,117 netMm10,130 netMm10,147 netMm10,154 netMm10,200 netMm10,203 netMm10,229 netMm10,239 netMm10,244 netMm10,252 netMm10,260 netMm10,264 netMm10,273 netMm10,290 netMm10,299 netMm10,313 netMm10,328 netMm10,334 netMm10,337 netMm10,352 netMm10,358 netMm10,362 netMm10,382 netMm10,388 netMm10,402 netMm10,420 netMm10,437 netMm10,440 netMm10,445 netMm10,458 netMm10,471 netMm10,473 netMm10,480 netMm10,483 netMm10,490 netMm10,496 netMm10,509 netMm10,520 netMm10,524 netMm10,527 netMm10,535 netMm10,539 netMm10,545 netMm10,556 netMm10,559 netMm10,571 netMm10,578 netMm10,580 netMm10,588 netMm10,594 netMm10,603 netMm10,606 netMm10,636 netMm10,641 netMm10,650 netMm10,654 netMm10,661 netMm10,684 netMm10,692 netMm10,762 netMm10,766 netMm10,774 netMm10,778 netMm10,782 netMm10,790 netMm10,835 netMm10,845 netMm10,864 netMm10,867 netMm10,879 netMm10,903 netMm10,945 netMm10,951 netMm10,969 netMm10,976 netMm10,988 netMm10,997 netMm10,1018 netMm10,1058 netOryLat2,20 netOryLat2,39 netOryLat2,61 netOryLat2,75 netOryLat2,121 netOryLat2,134 netOryLat2,151 netOryLat2,158 netOryLat2,204 netOryLat2,207 netOryLat2,233 netOryLat2,243 netOryLat2,248 netOryLat2,256 netOryLat2,264 netOryLat2,268 netOryLat2,277 netOryLat2,294 netOryLat2,303 netOryLat2,319 netOryLat2,334 netOryLat2,340 netOryLat2,343 netOryLat2,358 netOryLat2,364 netOryLat2,368 netOryLat2,388 netOryLat2,394 netOryLat2,408 netOryLat2,426 netOryLat2,443 netOryLat2,446 netOryLat2,451 netOryLat2,464 netOryLat2,477 netOryLat2,479 netOryLat2,486 netOryLat2,489 netOryLat2,496 netOryLat2,502 netOryLat2,515 netOryLat2,526 netOryLat2,530 netOryLat2,533 netOryLat2,541 netOryLat2,545 netOryLat2,551 netOryLat2,562 netOryLat2,565 netOryLat2,577 netOryLat2,584 netOryLat2,586 netOryLat2,594 netOryLat2,600 netOryLat2,609 netOryLat2,612 netOryLat2,642 netOryLat2,647 netOryLat2,656 netOryLat2,660 netOryLat2,667 netOryLat2,690 netOryLat2,698 netOryLat2,768 netOryLat2,772 netOryLat2,780 netOryLat2,784 netOryLat2,788 netOryLat2,796 netOryLat2,841 netOryLat2,851 netOryLat2,870 netOryLat2,873 netOryLat2,885 netOryLat2,909 netOryLat2,951 netOryLat2,957 netOryLat2,975 netOryLat2,982 netOryLat2,994 netOryLat2,1003 netOryLat2,1024 netOryLat2,1064 simpleRepeat,60 tRNAs,52 tRNAs,114 tRNAs,139 tRNAs,156 tRNAs,204 tRNAs,216 tRNAs,246 tRNAs,317 tRNAs,321 tRNAs,336 tRNAs,363 transMapEnsemblV5,24 transMapEnsemblV5,34 transMapEnsemblV5,71 transMapEnsemblV5,86 transMapEnsemblV5,98 transMapEnsemblV5,119 transMapEnsemblV5,126 transMapEnsemblV5,161 transMapEnsemblV5,178 transMapEnsemblV5,201 transMapEnsemblV5,208 transMapEnsemblV5,251 transMapEnsemblV5,255 transMapEnsemblV5,259 transMapEnsemblV5,271 transMapEnsemblV5,277 transMapEnsemblV5,294 transMapEnsemblV5,302 transMapEnsemblV5,309 transMapEnsemblV5,311 transMapEnsemblV5,322 transMapEnsemblV5,327 transMapEnsemblV5,331 transMapEnsemblV5,339 transMapEnsemblV5,343 transMapEnsemblV5,345 transMapEnsemblV5,376 transMapEnsemblV5,403 transMapEnsemblV5,413 transMapEnsemblV5,416 transMapEnsemblV5,438 transMapEnsemblV5,447 transMapEnsemblV5,460 transMapEnsemblV5,470 transMapEnsemblV5,482 transMapEnsemblV5,503 transMapEnsemblV5,517 transMapEnsemblV5,528 transMapEnsemblV5,532 transMapEnsemblV5,538 transMapEnsemblV5,577 transMapEnsemblV5,585 transMapEnsemblV5,603 transMapEnsemblV5,619 transMapEnsemblV5,642 transMapEnsemblV5,691 transMapEnsemblV5,703 transMapEnsemblV5,805 transMapEstV5,22 transMapEstV5,32 transMapEstV5,40 transMapEstV5,55 transMapEstV5,67 transMapEstV5,88 transMapEstV5,95 transMapEstV5,130 transMapEstV5,147 transMapEstV5,170 transMapEstV5,177 transMapEstV5,220 transMapEstV5,224 transMapEstV5,228 transMapEstV5,240 transMapEstV5,246 transMapEstV5,263 transMapEstV5,271 transMapEstV5,278 transMapEstV5,280 transMapEstV5,291 transMapEstV5,296 transMapEstV5,300 transMapEstV5,308 transMapEstV5,312 transMapEstV5,314 transMapEstV5,345 transMapEstV5,372 transMapEstV5,382 transMapEstV5,385 transMapEstV5,407 transMapEstV5,416 transMapEstV5,429 transMapEstV5,439 transMapEstV5,451 transMapEstV5,472 transMapEstV5,486 transMapEstV5,497 transMapEstV5,501 transMapEstV5,507 transMapEstV5,546 transMapEstV5,554 transMapEstV5,572 transMapEstV5,588 transMapEstV5,611 transMapEstV5,660 transMapEstV5,672 transMapEstV5,774 transMapRefSeqV5,22 transMapRefSeqV5,32 transMapRefSeqV5,40 transMapRefSeqV5,55 transMapRefSeqV5,67 transMapRefSeqV5,88 transMapRefSeqV5,95 transMapRefSeqV5,130 transMapRefSeqV5,147 transMapRefSeqV5,170 transMapRefSeqV5,177 transMapRefSeqV5,220 transMapRefSeqV5,224 transMapRefSeqV5,228 transMapRefSeqV5,240 transMapRefSeqV5,246 transMapRefSeqV5,263 transMapRefSeqV5,271 transMapRefSeqV5,278 transMapRefSeqV5,280 transMapRefSeqV5,291 transMapRefSeqV5,296 transMapRefSeqV5,300 transMapRefSeqV5,308 transMapRefSeqV5,312 transMapRefSeqV5,314 transMapRefSeqV5,345 transMapRefSeqV5,372 transMapRefSeqV5,382 transMapRefSeqV5,385 transMapRefSeqV5,407 transMapRefSeqV5,416 transMapRefSeqV5,429 transMapRefSeqV5,439 transMapRefSeqV5,451 transMapRefSeqV5,472 transMapRefSeqV5,486 transMapRefSeqV5,497 transMapRefSeqV5,501 transMapRefSeqV5,507 transMapRefSeqV5,546 transMapRefSeqV5,554 transMapRefSeqV5,572 transMapRefSeqV5,588 transMapRefSeqV5,611 transMapRefSeqV5,660 transMapRefSeqV5,672 transMapRefSeqV5,774 transMapRnaV5,22 transMapRnaV5,32 transMapRnaV5,40 transMapRnaV5,55 transMapRnaV5,67 transMapRnaV5,88 transMapRnaV5,95 transMapRnaV5,130 transMapRnaV5,147 transMapRnaV5,170 transMapRnaV5,177 transMapRnaV5,220 transMapRnaV5,224 transMapRnaV5,228 transMapRnaV5,240 transMapRnaV5,246 transMapRnaV5,263 transMapRnaV5,271 transMapRnaV5,278 transMapRnaV5,280 transMapRnaV5,291 transMapRnaV5,296 transMapRnaV5,300 transMapRnaV5,308 transMapRnaV5,312 transMapRnaV5,314 transMapRnaV5,345 transMapRnaV5,372 transMapRnaV5,382 transMapRnaV5,385 transMapRnaV5,407 transMapRnaV5,416 transMapRnaV5,429 transMapRnaV5,439 transMapRnaV5,451 transMapRnaV5,472 transMapRnaV5,486 transMapRnaV5,497 transMapRnaV5,501 transMapRnaV5,507 transMapRnaV5,546 transMapRnaV5,554 transMapRnaV5,572 transMapRnaV5,588 transMapRnaV5,611 transMapRnaV5,660 transMapRnaV5,672 transMapRnaV5,774 transMapV5,21 transMapV5,31 transMapV5,39 transMapV5,56 transMapV5,91 transMapV5,98 transMapV5,103 transMapV5,121 transMapV5,126 transMapV5,132 transMapV5,136 transMapV5,173 transMapV5,194 transMapV5,201 transMapV5,236 transMapV5,253 transMapV5,276 transMapV5,283 transMapV5,326 transMapV5,330 transMapV5,334 transMapV5,346 transMapV5,352 transMapV5,369 transMapV5,377 transMapV5,384 transMapV5,386 transMapV5,397 transMapV5,402 transMapV5,406 transMapV5,414 transMapV5,418 transMapV5,420 transMapV5,451 transMapV5,478 transMapV5,488 transMapV5,491 transMapV5,513 transMapV5,522 transMapV5,535 transMapV5,545 transMapV5,557 transMapV5,578 transMapV5,592 transMapV5,603 transMapV5,607 transMapV5,613 transMapV5,652 transMapV5,660 transMapV5,678 transMapV5,694 transMapV5,717 transMapV5,766 transMapV5,778 transMapV5,880 uniprot,22 uniprot,40 uniprot,53 uniprot,69 uniprot,81 uniprot,87 uniprot,94 uniprot,102 uniprot,119 uniprot,184 uniprot,202 uniprot,215 uniprot,233 uniprot,259 uniprot,270 uniprot,281 uniprot,308 uniprot,379 uniprot,410 uniprot,421 uniprot,428 uniprot,444 uniprot,463 uniprot,485 uniprot,493 uniprot,510 uniprot,527 uniprot,534 uniprot,539 uniprot,543 uniprot,547 uniprot,562 uniprot,571 uniprot,607 uniprot,640 uniprot,649 uniprot,668 uniprot,698 uniprot,748 uniprot,785 uniprot,789 uniprot,791 uniprot,797 uniprot,802 uniprot,810 uniprot,812 uniprot,819 uniprot,832 uniprot,836 uniprot,855 uniprot,873 uniprot,883 uniprot,903 uniprot,913 uniprot,923 uniprot,927 uniprot,935 uniprot,944 uniprot,947 uniprot,953 uniprot,961 uniprot,969 uniprot,1009 uniprot,1036 uniprot,1039 uniprot,1054 uniprot,1090 uniprot,1112 uniprot,1126 uniprot,1136 uniprot,1140 uniprot,1156 uniprot,1172 uniprot,1212 uniprot,1221 uniprot,1243 uniprot,1253 uniprot,1267 uniprot,1273 uniprot,1278 uniprot,1294 uniprot,1303 uniprot,1307 uniprot,1321 uniprot,1332 uniprot,1339 uniprot,1358 uniprot,1372 uniprot,1376 uniprot,1384 uniprot,1388 uniprot,1409 uniprot,1414 uniprot,1428 uniprot,1431 uniprot,1462 uniprot,1508 uniprot,1512 uniprot,1519 uniprot,1522 uniprot,1527 uniprot,1535 uniprot,1547 uniprot,1574 uniprot,1582 uniprot,1588 uniprot,1592 uniprot,1595 uniprot,1606 uniprot,1609 uniprot,1612 uniprot,1618 uniprot,1621 uniprot,1628 uniprot,1640 uniprot,1664 uniprot,1667 uniprot,1678 uniprot,1681 uniprot,1701 uniprot,1707 uniprot,1711 uniprot,1719 uniprot,1723 uniprot,1729 uniprot,1743 uniprot,1746 uniprot,1753 uniprot,1773 uniprot,1796 uniprot,1857 uniprot,1861 uniprot,1893 uniprot,1963 uniprot,1988 uniprot,1992 uniprot,2024 uniprot,2029 windowmaskerSdust,22 windowmaskerSdust,28 windowmaskerSdust,32 windowmaskerSdust,36 windowmaskerSdust,42 windowmaskerSdust,55 windowmaskerSdust,74 windowmaskerSdust,81 xenoMrna,36 xenoMrna,47 xenoMrna,59 xenoMrna,69 xenoMrna,72 xenoMrna,75 xenoMrna,82 xenoMrna,90 xenoMrna,94 xenoMrna,97 xenoMrna,103 xenoMrna,121 xenoMrna,126 xenoMrna,129 xenoMrna,144 xenoMrna,148 xenoMrna,158 xenoMrna,170 xenoMrna,180 xenoMrna,185 xenoMrna,195 xenoMrna,200 xenoMrna,207 xenoMrna,218 xenoMrna,221 xenoMrna,224 xenoMrna,229 xenoMrna,239 xenoMrna,242 xenoMrna,248 xenoMrna,258 xenoMrna,265 xenoMrna,274 xenoMrna,284 xenoMrna,294 xenoMrna,326 xenoMrna,333 xenoMrna,347 xenoMrna,356 xenoMrna,364 xenoMrna,373 xenoMrna,382 xenoMrna,399 xenoMrna,406 xenoMrna,418 xenoMrna,423 xenoMrna,437 xenoMrna,440 xenoMrna,457 xenoMrna,468 xenoMrna,481 xenoMrna,519 xenoRefGene,26 xenoRefGene,33 xenoRefGene,48 xenoRefGene,55 xenoRefGene,59 xenoRefGene,63 xenoRefGene,74 xenoRefGene,89 xenoRefGene,92 xenoRefGene,95 xenoRefGene,109 xenoRefGene,115 xenoRefGene,120 xenoRefGene,125 xenoRefGene,133 xenoRefGene,161 xenoRefGene,166 xenoRefGene,181 xenoRefGene,196 xenoRefGene,209 xenoRefGene,216 xenoRefGene,221 xenoRefGene,244 xenoRefGene,247 xenoRefGene,263 xenoRefGene,272 xenoRefGene,295 their nestedRepeats,190 uniprot,62 uniprot,723 uniprot,1101 them chainDanRer7,797 chainFr3,797 chainGalGal6,797 chainGasAcu1,797 chainHg19,797 chainMm10,797 chainNetDanRer7,800 chainNetFr3,800 chainNetGalGal6,800 chainNetGasAcu1,800 chainNetHg19,800 chainNetMm10,800 chainNetOryLat2,806 chainOryLat2,803 cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 netDanRer7,797 netFr3,797 netGalGal6,797 netGasAcu1,797 netHg19,797 netMm10,797 netOryLat2,803 tRNAs,280 uniprot,20 uniprot,173 uniprot,483 then chainDanRer7,647 chainDanRer7,786 chainDanRer7,871 chainFr3,647 chainFr3,786 chainFr3,871 chainGalGal6,647 chainGalGal6,786 chainGalGal6,871 chainGasAcu1,647 chainGasAcu1,786 chainGasAcu1,871 chainHg19,647 chainHg19,786 chainHg19,871 chainMm10,647 chainMm10,786 chainMm10,871 chainNetDanRer7,650 chainNetDanRer7,789 chainNetDanRer7,874 chainNetFr3,650 chainNetFr3,789 chainNetFr3,874 chainNetGalGal6,650 chainNetGalGal6,789 chainNetGalGal6,874 chainNetGasAcu1,650 chainNetGasAcu1,789 chainNetGasAcu1,874 chainNetHg19,650 chainNetHg19,789 chainNetHg19,874 chainNetMm10,650 chainNetMm10,789 chainNetMm10,874 chainNetOryLat2,656 chainNetOryLat2,795 chainNetOryLat2,880 chainOryLat2,653 chainOryLat2,792 chainOryLat2,877 cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 nestedRepeats,232 netDanRer7,647 netDanRer7,786 netDanRer7,871 netFr3,647 netFr3,786 netFr3,871 netGalGal6,647 netGalGal6,786 netGalGal6,871 netGasAcu1,647 netGasAcu1,786 netGasAcu1,871 netHg19,647 netHg19,786 netHg19,871 netMm10,647 netMm10,786 netMm10,871 netOryLat2,653 netOryLat2,792 netOryLat2,877 tRNAs,54 transMapV5,129 uniprot,1083 uniprot,1516 there cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 transMapEnsemblV5,450 transMapEstV5,419 transMapRefSeqV5,419 transMapRnaV5,419 transMapV5,525 uniprot,705 uniprot,1092 xenoMrna,115 therefore uniprot,968 uniprot,1145 these augustusGene,95 augustusGene,190 chainDanRer7,52 chainDanRer7,100 chainDanRer7,407 chainDanRer7,659 chainFr3,52 chainFr3,100 chainFr3,407 chainFr3,659 chainGalGal6,52 chainGalGal6,100 chainGalGal6,407 chainGalGal6,659 chainGasAcu1,52 chainGasAcu1,100 chainGasAcu1,407 chainGasAcu1,659 chainHg19,52 chainHg19,100 chainHg19,407 chainHg19,659 chainMm10,52 chainMm10,100 chainMm10,407 chainMm10,659 chainNetDanRer7,55 chainNetDanRer7,103 chainNetDanRer7,410 chainNetDanRer7,662 chainNetFr3,55 chainNetFr3,103 chainNetFr3,410 chainNetFr3,662 chainNetGalGal6,55 chainNetGalGal6,103 chainNetGalGal6,410 chainNetGalGal6,662 chainNetGasAcu1,55 chainNetGasAcu1,103 chainNetGasAcu1,410 chainNetGasAcu1,662 chainNetHg19,55 chainNetHg19,103 chainNetHg19,410 chainNetHg19,662 chainNetMm10,55 chainNetMm10,103 chainNetMm10,410 chainNetMm10,662 chainNetOryLat2,57 chainNetOryLat2,107 chainNetOryLat2,416 chainNetOryLat2,668 chainOryLat2,54 chainOryLat2,104 chainOryLat2,413 chainOryLat2,665 ensGene,10 ensGene,154 gap,114 gap,146 gap,167 gaze,27 gaze,124 microsat,24 nestedRepeats,262 nestedRepeats,266 netDanRer7,52 netDanRer7,100 netDanRer7,407 netDanRer7,659 netFr3,52 netFr3,100 netFr3,407 netFr3,659 netGalGal6,52 netGalGal6,100 netGalGal6,407 netGalGal6,659 netGasAcu1,52 netGasAcu1,100 netGasAcu1,407 netGasAcu1,659 netHg19,52 netHg19,100 netHg19,407 netHg19,659 netMm10,52 netMm10,100 netMm10,407 netMm10,659 netOryLat2,54 netOryLat2,104 netOryLat2,413 netOryLat2,665 simpleRepeat,33 tRNAs,56 tRNAs,223 tRNAs,257 tRNAs,303 tRNAs,359 transMapEnsemblV5,457 transMapEnsemblV5,466 transMapEnsemblV5,521 transMapEnsemblV5,582 transMapEstV5,426 transMapEstV5,435 transMapEstV5,490 transMapEstV5,551 transMapRefSeqV5,426 transMapRefSeqV5,435 transMapRefSeqV5,490 transMapRefSeqV5,551 transMapRnaV5,426 transMapRnaV5,435 transMapRnaV5,490 transMapRnaV5,551 transMapV5,12 transMapV5,532 transMapV5,541 transMapV5,596 transMapV5,657 uniprot,99 uniprot,130 uniprot,1160 thesis chainDanRer7,1017 chainFr3,1017 chainGalGal6,1017 chainGasAcu1,1017 chainHg19,1017 chainMm10,1017 chainNetDanRer7,1020 chainNetFr3,1020 chainNetGalGal6,1020 chainNetGasAcu1,1020 chainNetHg19,1020 chainNetMm10,1020 chainNetOryLat2,1026 chainOryLat2,1023 netDanRer7,1017 netFr3,1017 netGalGal6,1017 netGasAcu1,1017 netHg19,1017 netMm10,1017 netOryLat2,1023 they chainDanRer7,324 chainFr3,324 chainGalGal6,324 chainGasAcu1,324 chainHg19,324 chainMm10,324 chainNetDanRer7,327 chainNetFr3,327 chainNetGalGal6,327 chainNetGasAcu1,327 chainNetHg19,327 chainNetMm10,327 chainNetOryLat2,333 chainOryLat2,330 gap,162 netDanRer7,324 netFr3,324 netGalGal6,324 netGasAcu1,324 netHg19,324 netMm10,324 netOryLat2,330 tRNAs,188 tRNAs,267 uniprot,179 thibaud-nissen xenoRefGene,323 thick chainDanRer7,43 chainFr3,43 chainGalGal6,43 chainGasAcu1,43 chainHg19,43 chainMm10,43 chainNetDanRer7,46 chainNetFr3,46 chainNetGalGal6,46 chainNetGasAcu1,46 chainNetHg19,46 chainNetMm10,46 chainNetOryLat2,48 chainOryLat2,45 netDanRer7,43 netFr3,43 netGalGal6,43 netGasAcu1,43 netHg19,43 netMm10,43 netOryLat2,45 this augustusGene,13 augustusGene,106 augustusGene,224 blastHg18KG,14 blastHg18KG,189 chainDanRer7,13 chainDanRer7,170 chainDanRer7,295 chainDanRer7,394 chainDanRer7,690 chainDanRer7,812 chainFr3,13 chainFr3,170 chainFr3,295 chainFr3,394 chainFr3,690 chainFr3,812 chainGalGal6,13 chainGalGal6,170 chainGalGal6,295 chainGalGal6,394 chainGalGal6,690 chainGalGal6,812 chainGasAcu1,13 chainGasAcu1,170 chainGasAcu1,295 chainGasAcu1,394 chainGasAcu1,690 chainGasAcu1,812 chainHg19,13 chainHg19,170 chainHg19,295 chainHg19,394 chainHg19,690 chainHg19,812 chainMm10,13 chainMm10,170 chainMm10,295 chainMm10,394 chainMm10,690 chainMm10,812 chainNetDanRer7,16 chainNetDanRer7,173 chainNetDanRer7,298 chainNetDanRer7,397 chainNetDanRer7,693 chainNetDanRer7,815 chainNetFr3,16 chainNetFr3,173 chainNetFr3,298 chainNetFr3,397 chainNetFr3,693 chainNetFr3,815 chainNetGalGal6,16 chainNetGalGal6,173 chainNetGalGal6,298 chainNetGalGal6,397 chainNetGalGal6,693 chainNetGalGal6,815 chainNetGasAcu1,16 chainNetGasAcu1,173 chainNetGasAcu1,298 chainNetGasAcu1,397 chainNetGasAcu1,693 chainNetGasAcu1,815 chainNetHg19,16 chainNetHg19,173 chainNetHg19,298 chainNetHg19,397 chainNetHg19,693 chainNetHg19,815 chainNetMm10,16 chainNetMm10,173 chainNetMm10,298 chainNetMm10,397 chainNetMm10,693 chainNetMm10,815 chainNetOryLat2,18 chainNetOryLat2,177 chainNetOryLat2,302 chainNetOryLat2,403 chainNetOryLat2,699 chainNetOryLat2,821 chainOryLat2,15 chainOryLat2,174 chainOryLat2,299 chainOryLat2,400 chainOryLat2,696 chainOryLat2,818 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 ensGene,119 ensGene,135 gap,8 gap,22 gap,63 gap,84 gaze,12 gc5Base,38 gc5Base,77 genscan,11 genscan,65 genscan,128 gold,9 gold,61 gold,164 gold,176 microsat,11 microsat,50 microsat,99 mrna,29 mrna,59 mrna,86 mrna,311 mrna,339 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 netDanRer7,13 netDanRer7,170 netDanRer7,295 netDanRer7,394 netDanRer7,690 netDanRer7,812 netFr3,13 netFr3,170 netFr3,295 netFr3,394 netFr3,690 netFr3,812 netGalGal6,13 netGalGal6,170 netGalGal6,295 netGalGal6,394 netGalGal6,690 netGalGal6,812 netGasAcu1,13 netGasAcu1,170 netGasAcu1,295 netGasAcu1,394 netGasAcu1,690 netGasAcu1,812 netHg19,13 netHg19,170 netHg19,295 netHg19,394 netHg19,690 netHg19,812 netMm10,13 netMm10,170 netMm10,295 netMm10,394 netMm10,690 netMm10,812 netOryLat2,15 netOryLat2,174 netOryLat2,299 netOryLat2,400 netOryLat2,696 netOryLat2,818 simpleRepeat,12 simpleRepeat,31 tRNAs,14 tRNAs,134 transMapEnsemblV5,15 transMapEnsemblV5,95 transMapEnsemblV5,105 transMapEnsemblV5,133 transMapEnsemblV5,286 transMapEnsemblV5,674 transMapEstV5,13 transMapEstV5,64 transMapEstV5,74 transMapEstV5,102 transMapEstV5,255 transMapEstV5,643 transMapRefSeqV5,14 transMapRefSeqV5,64 transMapRefSeqV5,74 transMapRefSeqV5,102 transMapRefSeqV5,255 transMapRefSeqV5,643 transMapRnaV5,14 transMapRnaV5,64 transMapRnaV5,74 transMapRnaV5,102 transMapRnaV5,255 transMapRnaV5,643 transMapV5,170 transMapV5,180 transMapV5,208 transMapV5,361 transMapV5,749 uniprot,12 uniprot,134 uniprot,149 uniprot,218 uniprot,220 uniprot,653 uniprot,663 uniprot,871 uniprot,878 uniprot,1018 uniprot,1058 uniprot,1063 uniprot,1248 uniprot,1259 uniprot,1352 uniprot,1447 uniprot,1530 uniprot,1553 uniprot,1562 uniprot,1657 uniprot,1674 uniprot,1688 uniprot,1939 windowmaskerSdust,13 windowmaskerSdust,49 windowmaskerSdust,87 xenoMrna,11 xenoMrna,33 xenoMrna,63 xenoMrna,133 xenoMrna,160 xenoMrna,385 xenoMrna,413 xenoRefGene,11 xenoRefGene,36 xenoRefGene,45 xenoRefGene,83 xenoRefGene,138 xenoRefGene,177 xenoRefGene,213 xenoRefGene,278 those microsat,62 mrna,304 nestedRepeats,272 tRNAs,176 uniprot,729 xenoMrna,378 xenoMrna,447 xenoRefGene,226 thousands chainDanRer7,250 chainFr3,250 chainGalGal6,250 chainGasAcu1,250 chainHg19,250 chainMm10,250 chainNetDanRer7,253 chainNetFr3,253 chainNetGalGal6,253 chainNetGasAcu1,253 chainNetHg19,253 chainNetMm10,253 chainNetOryLat2,257 chainOryLat2,254 netDanRer7,250 netFr3,250 netGalGal6,250 netGasAcu1,250 netHg19,250 netMm10,250 netOryLat2,254 three uniprot,1227 three-step uniprot,989 through gap,56 gold,66 nestedRepeats,97 transMapEnsemblV5,527 transMapEstV5,496 transMapRefSeqV5,496 transMapRnaV5,496 transMapV5,602 uniprot,98 uniprot,133 uniprot,633 uniprot,804 uniprot,1521 xenoRefGene,88 time chainDanRer7,795 chainFr3,795 chainGalGal6,795 chainGasAcu1,795 chainHg19,795 chainMm10,795 chainNetDanRer7,798 chainNetFr3,798 chainNetGalGal6,798 chainNetGasAcu1,798 chainNetHg19,798 chainNetMm10,798 chainNetOryLat2,804 chainOryLat2,801 cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 netDanRer7,795 netFr3,795 netGalGal6,795 netGasAcu1,795 netHg19,795 netMm10,795 netOryLat2,801 tissue mrna,151 mrna,186 mrna,201 xenoMrna,225 xenoMrna,260 xenoMrna,275 tissues mrna,194 xenoMrna,268 tm tRNAs,369 tRNAs,441 to augustusGene,115 augustusGene,170 augustusGene,249 augustusGene,301 blastHg18KG,56 blastHg18KG,187 chainDanRer7,23 chainDanRer7,70 chainDanRer7,143 chainDanRer7,211 chainDanRer7,223 chainDanRer7,315 chainDanRer7,326 chainDanRer7,331 chainDanRer7,343 chainDanRer7,349 chainDanRer7,372 chainDanRer7,453 chainDanRer7,467 chainDanRer7,551 chainDanRer7,652 chainDanRer7,788 chainDanRer7,800 chainDanRer7,840 chainDanRer7,863 chainDanRer7,873 chainFr3,23 chainFr3,70 chainFr3,143 chainFr3,211 chainFr3,223 chainFr3,315 chainFr3,326 chainFr3,331 chainFr3,343 chainFr3,349 chainFr3,372 chainFr3,453 chainFr3,467 chainFr3,551 chainFr3,652 chainFr3,788 chainFr3,800 chainFr3,840 chainFr3,863 chainFr3,873 chainGalGal6,23 chainGalGal6,70 chainGalGal6,143 chainGalGal6,211 chainGalGal6,223 chainGalGal6,315 chainGalGal6,326 chainGalGal6,331 chainGalGal6,343 chainGalGal6,349 chainGalGal6,372 chainGalGal6,453 chainGalGal6,467 chainGalGal6,551 chainGalGal6,652 chainGalGal6,788 chainGalGal6,800 chainGalGal6,840 chainGalGal6,863 chainGalGal6,873 chainGasAcu1,23 chainGasAcu1,70 chainGasAcu1,143 chainGasAcu1,211 chainGasAcu1,223 chainGasAcu1,315 chainGasAcu1,326 chainGasAcu1,331 chainGasAcu1,343 chainGasAcu1,349 chainGasAcu1,372 chainGasAcu1,453 chainGasAcu1,467 chainGasAcu1,551 chainGasAcu1,652 chainGasAcu1,788 chainGasAcu1,800 chainGasAcu1,840 chainGasAcu1,863 chainGasAcu1,873 chainHg19,23 chainHg19,70 chainHg19,143 chainHg19,211 chainHg19,223 chainHg19,315 chainHg19,326 chainHg19,331 chainHg19,343 chainHg19,349 chainHg19,372 chainHg19,453 chainHg19,467 chainHg19,551 chainHg19,652 chainHg19,788 chainHg19,800 chainHg19,840 chainHg19,863 chainHg19,873 chainMm10,23 chainMm10,70 chainMm10,143 chainMm10,211 chainMm10,223 chainMm10,315 chainMm10,326 chainMm10,331 chainMm10,343 chainMm10,349 chainMm10,372 chainMm10,453 chainMm10,467 chainMm10,551 chainMm10,652 chainMm10,788 chainMm10,800 chainMm10,840 chainMm10,863 chainMm10,873 chainNetDanRer7,26 chainNetDanRer7,73 chainNetDanRer7,146 chainNetDanRer7,214 chainNetDanRer7,226 chainNetDanRer7,318 chainNetDanRer7,329 chainNetDanRer7,334 chainNetDanRer7,346 chainNetDanRer7,352 chainNetDanRer7,375 chainNetDanRer7,456 chainNetDanRer7,470 chainNetDanRer7,554 chainNetDanRer7,655 chainNetDanRer7,791 chainNetDanRer7,803 chainNetDanRer7,843 chainNetDanRer7,866 chainNetDanRer7,876 chainNetFr3,26 chainNetFr3,73 chainNetFr3,146 chainNetFr3,214 chainNetFr3,226 chainNetFr3,318 chainNetFr3,329 chainNetFr3,334 chainNetFr3,346 chainNetFr3,352 chainNetFr3,375 chainNetFr3,456 chainNetFr3,470 chainNetFr3,554 chainNetFr3,655 chainNetFr3,791 chainNetFr3,803 chainNetFr3,843 chainNetFr3,866 chainNetFr3,876 chainNetGalGal6,26 chainNetGalGal6,73 chainNetGalGal6,146 chainNetGalGal6,214 chainNetGalGal6,226 chainNetGalGal6,318 chainNetGalGal6,329 chainNetGalGal6,334 chainNetGalGal6,346 chainNetGalGal6,352 chainNetGalGal6,375 chainNetGalGal6,456 chainNetGalGal6,470 chainNetGalGal6,554 chainNetGalGal6,655 chainNetGalGal6,791 chainNetGalGal6,803 chainNetGalGal6,843 chainNetGalGal6,866 chainNetGalGal6,876 chainNetGasAcu1,26 chainNetGasAcu1,73 chainNetGasAcu1,146 chainNetGasAcu1,214 chainNetGasAcu1,226 chainNetGasAcu1,318 chainNetGasAcu1,329 chainNetGasAcu1,334 chainNetGasAcu1,346 chainNetGasAcu1,352 chainNetGasAcu1,375 chainNetGasAcu1,456 chainNetGasAcu1,470 chainNetGasAcu1,554 chainNetGasAcu1,655 chainNetGasAcu1,791 chainNetGasAcu1,803 chainNetGasAcu1,843 chainNetGasAcu1,866 chainNetGasAcu1,876 chainNetHg19,26 chainNetHg19,73 chainNetHg19,146 chainNetHg19,214 chainNetHg19,226 chainNetHg19,318 chainNetHg19,329 chainNetHg19,334 chainNetHg19,346 chainNetHg19,352 chainNetHg19,375 chainNetHg19,456 chainNetHg19,470 chainNetHg19,554 chainNetHg19,655 chainNetHg19,791 chainNetHg19,803 chainNetHg19,843 chainNetHg19,866 chainNetHg19,876 chainNetMm10,26 chainNetMm10,73 chainNetMm10,146 chainNetMm10,214 chainNetMm10,226 chainNetMm10,318 chainNetMm10,329 chainNetMm10,334 chainNetMm10,346 chainNetMm10,352 chainNetMm10,375 chainNetMm10,456 chainNetMm10,470 chainNetMm10,554 chainNetMm10,655 chainNetMm10,791 chainNetMm10,803 chainNetMm10,843 chainNetMm10,866 chainNetMm10,876 chainNetOryLat2,28 chainNetOryLat2,77 chainNetOryLat2,150 chainNetOryLat2,218 chainNetOryLat2,230 chainNetOryLat2,324 chainNetOryLat2,335 chainNetOryLat2,340 chainNetOryLat2,352 chainNetOryLat2,358 chainNetOryLat2,381 chainNetOryLat2,462 chainNetOryLat2,476 chainNetOryLat2,560 chainNetOryLat2,661 chainNetOryLat2,797 chainNetOryLat2,809 chainNetOryLat2,849 chainNetOryLat2,872 chainNetOryLat2,882 chainOryLat2,25 chainOryLat2,74 chainOryLat2,147 chainOryLat2,215 chainOryLat2,227 chainOryLat2,321 chainOryLat2,332 chainOryLat2,337 chainOryLat2,349 chainOryLat2,355 chainOryLat2,378 chainOryLat2,459 chainOryLat2,473 chainOryLat2,557 chainOryLat2,658 chainOryLat2,794 chainOryLat2,806 chainOryLat2,846 chainOryLat2,869 chainOryLat2,879 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 ensGene,43 ensGene,149 gaze,72 gaze,120 gc5Base,48 genscan,95 genscan,105 genscan,114 genscan,145 genscan,171 gold,52 gold,74 gold,126 gold,231 gold,235 gold,249 microsat,18 microsat,38 microsat,121 mrna,68 mrna,105 mrna,109 mrna,124 mrna,131 mrna,135 mrna,153 mrna,173 mrna,180 mrna,268 mrna,317 mrna,327 mrna,411 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 netDanRer7,23 netDanRer7,70 netDanRer7,143 netDanRer7,211 netDanRer7,223 netDanRer7,315 netDanRer7,326 netDanRer7,331 netDanRer7,343 netDanRer7,349 netDanRer7,372 netDanRer7,453 netDanRer7,467 netDanRer7,551 netDanRer7,652 netDanRer7,788 netDanRer7,800 netDanRer7,840 netDanRer7,863 netDanRer7,873 netFr3,23 netFr3,70 netFr3,143 netFr3,211 netFr3,223 netFr3,315 netFr3,326 netFr3,331 netFr3,343 netFr3,349 netFr3,372 netFr3,453 netFr3,467 netFr3,551 netFr3,652 netFr3,788 netFr3,800 netFr3,840 netFr3,863 netFr3,873 netGalGal6,23 netGalGal6,70 netGalGal6,143 netGalGal6,211 netGalGal6,223 netGalGal6,315 netGalGal6,326 netGalGal6,331 netGalGal6,343 netGalGal6,349 netGalGal6,372 netGalGal6,453 netGalGal6,467 netGalGal6,551 netGalGal6,652 netGalGal6,788 netGalGal6,800 netGalGal6,840 netGalGal6,863 netGalGal6,873 netGasAcu1,23 netGasAcu1,70 netGasAcu1,143 netGasAcu1,211 netGasAcu1,223 netGasAcu1,315 netGasAcu1,326 netGasAcu1,331 netGasAcu1,343 netGasAcu1,349 netGasAcu1,372 netGasAcu1,453 netGasAcu1,467 netGasAcu1,551 netGasAcu1,652 netGasAcu1,788 netGasAcu1,800 netGasAcu1,840 netGasAcu1,863 netGasAcu1,873 netHg19,23 netHg19,70 netHg19,143 netHg19,211 netHg19,223 netHg19,315 netHg19,326 netHg19,331 netHg19,343 netHg19,349 netHg19,372 netHg19,453 netHg19,467 netHg19,551 netHg19,652 netHg19,788 netHg19,800 netHg19,840 netHg19,863 netHg19,873 netMm10,23 netMm10,70 netMm10,143 netMm10,211 netMm10,223 netMm10,315 netMm10,326 netMm10,331 netMm10,343 netMm10,349 netMm10,372 netMm10,453 netMm10,467 netMm10,551 netMm10,652 netMm10,788 netMm10,800 netMm10,840 netMm10,863 netMm10,873 netOryLat2,25 netOryLat2,74 netOryLat2,147 netOryLat2,215 netOryLat2,227 netOryLat2,321 netOryLat2,332 netOryLat2,337 netOryLat2,349 netOryLat2,355 netOryLat2,378 netOryLat2,459 netOryLat2,473 netOryLat2,557 netOryLat2,658 netOryLat2,794 netOryLat2,806 netOryLat2,846 netOryLat2,869 netOryLat2,879 simpleRepeat,81 tRNAs,44 tRNAs,66 tRNAs,127 tRNAs,170 tRNAs,219 tRNAs,251 transMapEnsemblV5,111 transMapEnsemblV5,121 transMapEnsemblV5,177 transMapEnsemblV5,200 transMapEnsemblV5,258 transMapEnsemblV5,291 transMapEnsemblV5,299 transMapEnsemblV5,316 transMapEnsemblV5,330 transMapEnsemblV5,342 transMapEnsemblV5,381 transMapEnsemblV5,426 transMapEnsemblV5,436 transMapEnsemblV5,469 transMapEnsemblV5,475 transMapEnsemblV5,488 transMapEnsemblV5,648 transMapEnsemblV5,690 transMapEnsemblV5,769 transMapEstV5,80 transMapEstV5,90 transMapEstV5,146 transMapEstV5,169 transMapEstV5,227 transMapEstV5,260 transMapEstV5,268 transMapEstV5,285 transMapEstV5,299 transMapEstV5,311 transMapEstV5,350 transMapEstV5,395 transMapEstV5,405 transMapEstV5,438 transMapEstV5,444 transMapEstV5,457 transMapEstV5,617 transMapEstV5,659 transMapEstV5,738 transMapRefSeqV5,80 transMapRefSeqV5,90 transMapRefSeqV5,146 transMapRefSeqV5,169 transMapRefSeqV5,227 transMapRefSeqV5,260 transMapRefSeqV5,268 transMapRefSeqV5,285 transMapRefSeqV5,299 transMapRefSeqV5,311 transMapRefSeqV5,350 transMapRefSeqV5,395 transMapRefSeqV5,405 transMapRefSeqV5,438 transMapRefSeqV5,444 transMapRefSeqV5,457 transMapRefSeqV5,617 transMapRefSeqV5,659 transMapRefSeqV5,738 transMapRnaV5,80 transMapRnaV5,90 transMapRnaV5,146 transMapRnaV5,169 transMapRnaV5,227 transMapRnaV5,260 transMapRnaV5,268 transMapRnaV5,285 transMapRnaV5,299 transMapRnaV5,311 transMapRnaV5,350 transMapRnaV5,395 transMapRnaV5,405 transMapRnaV5,438 transMapRnaV5,444 transMapRnaV5,457 transMapRnaV5,617 transMapRnaV5,659 transMapRnaV5,738 transMapV5,79 transMapV5,89 transMapV5,120 transMapV5,131 transMapV5,154 transMapV5,186 transMapV5,196 transMapV5,252 transMapV5,275 transMapV5,333 transMapV5,366 transMapV5,374 transMapV5,391 transMapV5,405 transMapV5,417 transMapV5,456 transMapV5,501 transMapV5,511 transMapV5,544 transMapV5,550 transMapV5,563 transMapV5,723 transMapV5,765 transMapV5,844 unipAliSwissprot,8 unipAliTrembl,8 uniprot,27 uniprot,86 uniprot,101 uniprot,118 uniprot,201 uniprot,214 uniprot,226 uniprot,245 uniprot,492 uniprot,525 uniprot,552 uniprot,559 uniprot,658 uniprot,682 uniprot,764 uniprot,784 uniprot,801 uniprot,849 uniprot,917 uniprot,920 uniprot,955 uniprot,974 uniprot,1008 uniprot,1088 uniprot,1196 uniprot,1215 uniprot,1220 uniprot,1247 uniprot,1285 uniprot,1336 uniprot,1356 uniprot,1369 uniprot,1405 uniprot,1413 uniprot,1460 uniprot,1473 uniprot,1478 uniprot,1493 uniprot,1518 uniprot,1551 uniprot,1676 uniprot,1761 uniprot,1802 uniprot,1828 uniprot,1846 uniprot,1851 uniprot,1856 uniprot,1884 uniprot,1890 uniprot,1975 windowmaskerSdust,47 xenoMrna,87 xenoMrna,142 xenoMrna,179 xenoMrna,183 xenoMrna,198 xenoMrna,205 xenoMrna,209 xenoMrna,227 xenoMrna,247 xenoMrna,254 xenoMrna,342 xenoMrna,391 xenoMrna,401 xenoMrna,480 xenoRefGene,113 xenoRefGene,149 xenoRefGene,156 xenoRefGene,180 xenoRefGene,206 together blastHg18KG,87 chainDanRer7,123 chainFr3,123 chainGalGal6,123 chainGasAcu1,123 chainHg19,123 chainMm10,123 chainNetDanRer7,126 chainNetFr3,126 chainNetGalGal6,126 chainNetGasAcu1,126 chainNetHg19,126 chainNetMm10,126 chainNetOryLat2,130 chainOryLat2,127 netDanRer7,123 netFr3,123 netGalGal6,123 netGasAcu1,123 netHg19,123 netMm10,123 netOryLat2,127 tolerate chainDanRer7,92 chainFr3,92 chainGalGal6,92 chainGasAcu1,92 chainHg19,92 chainMm10,92 chainNetDanRer7,95 chainNetFr3,95 chainNetGalGal6,95 chainNetGasAcu1,95 chainNetHg19,95 chainNetMm10,95 chainNetOryLat2,99 chainOryLat2,96 netDanRer7,92 netFr3,92 netGalGal6,92 netGasAcu1,92 netHg19,92 netMm10,92 netOryLat2,96 tolerated uniprot,1257 tool blastHg18KG,145 blastHg18KG,167 mrna,453 transMapEnsemblV5,612 transMapEnsemblV5,643 transMapEstV5,581 transMapEstV5,612 transMapRefSeqV5,581 transMapRefSeqV5,612 transMapRnaV5,581 transMapRnaV5,612 transMapV5,687 transMapV5,718 uniprot,1766 uniprot,1797 windowmaskerSdust,24 xenoMrna,522 xenoRefGene,305 toolkit windowmaskerSdust,31 windowmaskerSdust,38 tools nestedRepeats,314 uniprot,1873 top chainDanRer7,508 chainFr3,508 chainGalGal6,508 chainGasAcu1,508 chainHg19,508 chainMm10,508 chainNetDanRer7,511 chainNetFr3,511 chainNetGalGal6,511 chainNetGasAcu1,511 chainNetHg19,511 chainNetMm10,511 chainNetOryLat2,517 chainOryLat2,514 cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 netDanRer7,508 netFr3,508 netGalGal6,508 netGasAcu1,508 netHg19,508 netMm10,508 netOryLat2,514 uniprot,1304 uniprot,1340 uniprot,1489 xenoRefGene,93 top-level chainDanRer7,383 chainDanRer7,403 chainFr3,383 chainFr3,403 chainGalGal6,383 chainGalGal6,403 chainGasAcu1,383 chainGasAcu1,403 chainHg19,383 chainHg19,403 chainMm10,383 chainMm10,403 chainNetDanRer7,386 chainNetDanRer7,406 chainNetFr3,386 chainNetFr3,406 chainNetGalGal6,386 chainNetGalGal6,406 chainNetGasAcu1,386 chainNetGasAcu1,406 chainNetHg19,386 chainNetHg19,406 chainNetMm10,386 chainNetMm10,406 chainNetOryLat2,392 chainNetOryLat2,412 chainOryLat2,389 chainOryLat2,409 netDanRer7,383 netDanRer7,403 netFr3,383 netFr3,403 netGalGal6,383 netGalGal6,403 netGasAcu1,383 netGasAcu1,403 netHg19,383 netHg19,403 netMm10,383 netMm10,403 netOryLat2,389 netOryLat2,409 top-scoring uniprot,792 topological uniprot,330 track augustusGene,14 augustusGene,107 blastHg18KG,15 blastHg18KG,34 blastHg18KG,45 blastHg18KG,190 chainDanRer7,14 chainDanRer7,58 chainDanRer7,61 chainDanRer7,119 chainDanRer7,259 chainDanRer7,262 chainDanRer7,310 chainDanRer7,345 chainDanRer7,377 chainDanRer7,564 chainDanRer7,691 chainDanRer7,754 chainFr3,14 chainFr3,58 chainFr3,61 chainFr3,119 chainFr3,259 chainFr3,262 chainFr3,310 chainFr3,345 chainFr3,377 chainFr3,564 chainFr3,691 chainFr3,754 chainGalGal6,14 chainGalGal6,58 chainGalGal6,61 chainGalGal6,119 chainGalGal6,259 chainGalGal6,262 chainGalGal6,310 chainGalGal6,345 chainGalGal6,377 chainGalGal6,564 chainGalGal6,691 chainGalGal6,754 chainGasAcu1,14 chainGasAcu1,58 chainGasAcu1,61 chainGasAcu1,119 chainGasAcu1,259 chainGasAcu1,262 chainGasAcu1,310 chainGasAcu1,345 chainGasAcu1,377 chainGasAcu1,564 chainGasAcu1,691 chainGasAcu1,754 chainHg19,14 chainHg19,58 chainHg19,61 chainHg19,119 chainHg19,259 chainHg19,262 chainHg19,310 chainHg19,345 chainHg19,377 chainHg19,564 chainHg19,691 chainHg19,754 chainMm10,14 chainMm10,58 chainMm10,61 chainMm10,119 chainMm10,259 chainMm10,262 chainMm10,310 chainMm10,345 chainMm10,377 chainMm10,564 chainMm10,691 chainMm10,754 chainNetDanRer7,17 chainNetDanRer7,61 chainNetDanRer7,64 chainNetDanRer7,122 chainNetDanRer7,262 chainNetDanRer7,265 chainNetDanRer7,313 chainNetDanRer7,348 chainNetDanRer7,380 chainNetDanRer7,567 chainNetDanRer7,694 chainNetDanRer7,757 chainNetFr3,17 chainNetFr3,61 chainNetFr3,64 chainNetFr3,122 chainNetFr3,262 chainNetFr3,265 chainNetFr3,313 chainNetFr3,348 chainNetFr3,380 chainNetFr3,567 chainNetFr3,694 chainNetFr3,757 chainNetGalGal6,17 chainNetGalGal6,61 chainNetGalGal6,64 chainNetGalGal6,122 chainNetGalGal6,262 chainNetGalGal6,265 chainNetGalGal6,313 chainNetGalGal6,348 chainNetGalGal6,380 chainNetGalGal6,567 chainNetGalGal6,694 chainNetGalGal6,757 chainNetGasAcu1,17 chainNetGasAcu1,61 chainNetGasAcu1,64 chainNetGasAcu1,122 chainNetGasAcu1,262 chainNetGasAcu1,265 chainNetGasAcu1,313 chainNetGasAcu1,348 chainNetGasAcu1,380 chainNetGasAcu1,567 chainNetGasAcu1,694 chainNetGasAcu1,757 chainNetHg19,17 chainNetHg19,61 chainNetHg19,64 chainNetHg19,122 chainNetHg19,262 chainNetHg19,265 chainNetHg19,313 chainNetHg19,348 chainNetHg19,380 chainNetHg19,567 chainNetHg19,694 chainNetHg19,757 chainNetMm10,17 chainNetMm10,61 chainNetMm10,64 chainNetMm10,122 chainNetMm10,262 chainNetMm10,265 chainNetMm10,313 chainNetMm10,348 chainNetMm10,380 chainNetMm10,567 chainNetMm10,694 chainNetMm10,757 chainNetOryLat2,19 chainNetOryLat2,63 chainNetOryLat2,66 chainNetOryLat2,126 chainNetOryLat2,266 chainNetOryLat2,269 chainNetOryLat2,319 chainNetOryLat2,354 chainNetOryLat2,386 chainNetOryLat2,573 chainNetOryLat2,700 chainNetOryLat2,763 chainOryLat2,16 chainOryLat2,60 chainOryLat2,63 chainOryLat2,123 chainOryLat2,263 chainOryLat2,266 chainOryLat2,316 chainOryLat2,351 chainOryLat2,383 chainOryLat2,570 chainOryLat2,697 chainOryLat2,760 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 ensGene,136 gap,9 gap,23 gaze,13 gc5Base,15 gc5Base,39 genscan,12 genscan,66 genscan,76 genscan,87 gold,10 gold,62 gold,165 microsat,12 microsat,51 microsat,59 microsat,87 mrna,14 mrna,30 mrna,60 mrna,85 mrna,97 mrna,312 mrna,401 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 netDanRer7,14 netDanRer7,58 netDanRer7,61 netDanRer7,119 netDanRer7,259 netDanRer7,262 netDanRer7,310 netDanRer7,345 netDanRer7,377 netDanRer7,564 netDanRer7,691 netDanRer7,754 netFr3,14 netFr3,58 netFr3,61 netFr3,119 netFr3,259 netFr3,262 netFr3,310 netFr3,345 netFr3,377 netFr3,564 netFr3,691 netFr3,754 netGalGal6,14 netGalGal6,58 netGalGal6,61 netGalGal6,119 netGalGal6,259 netGalGal6,262 netGalGal6,310 netGalGal6,345 netGalGal6,377 netGalGal6,564 netGalGal6,691 netGalGal6,754 netGasAcu1,14 netGasAcu1,58 netGasAcu1,61 netGasAcu1,119 netGasAcu1,259 netGasAcu1,262 netGasAcu1,310 netGasAcu1,345 netGasAcu1,377 netGasAcu1,564 netGasAcu1,691 netGasAcu1,754 netHg19,14 netHg19,58 netHg19,61 netHg19,119 netHg19,259 netHg19,262 netHg19,310 netHg19,345 netHg19,377 netHg19,564 netHg19,691 netHg19,754 netMm10,14 netMm10,58 netMm10,61 netMm10,119 netMm10,259 netMm10,262 netMm10,310 netMm10,345 netMm10,377 netMm10,564 netMm10,691 netMm10,754 netOryLat2,16 netOryLat2,60 netOryLat2,63 netOryLat2,123 netOryLat2,263 netOryLat2,266 netOryLat2,316 netOryLat2,351 netOryLat2,383 netOryLat2,570 netOryLat2,697 netOryLat2,760 simpleRepeat,13 tRNAs,15 transMapEnsemblV5,16 transMapEnsemblV5,96 transMapEnsemblV5,106 transMapEnsemblV5,231 transMapEnsemblV5,569 transMapEnsemblV5,573 transMapEnsemblV5,675 transMapEstV5,14 transMapEstV5,65 transMapEstV5,75 transMapEstV5,200 transMapEstV5,538 transMapEstV5,542 transMapEstV5,644 transMapRefSeqV5,15 transMapRefSeqV5,65 transMapRefSeqV5,75 transMapRefSeqV5,200 transMapRefSeqV5,538 transMapRefSeqV5,542 transMapRefSeqV5,644 transMapRnaV5,15 transMapRnaV5,65 transMapRnaV5,75 transMapRnaV5,200 transMapRnaV5,538 transMapRnaV5,542 transMapRnaV5,644 transMapV5,101 transMapV5,171 transMapV5,181 transMapV5,306 transMapV5,644 transMapV5,648 transMapV5,750 uniprot,13 uniprot,104 uniprot,150 uniprot,219 uniprot,221 uniprot,234 uniprot,422 uniprot,429 uniprot,576 uniprot,654 uniprot,710 uniprot,1004 uniprot,1208 uniprot,1277 uniprot,1554 uniprot,1563 uniprot,1583 uniprot,1658 uniprot,1671 uniprot,1689 uniprot,1713 uniprot,1754 uniprot,1940 windowmaskerSdust,14 windowmaskerSdust,50 windowmaskerSdust,88 xenoMrna,12 xenoMrna,34 xenoMrna,64 xenoMrna,134 xenoMrna,159 xenoMrna,171 xenoMrna,386 xenoMrna,470 xenoRefGene,12 xenoRefGene,37 xenoRefGene,46 xenoRefGene,84 xenoRefGene,96 xenoRefGene,139 xenoRefGene,168 xenoRefGene,279 tracks augustusGene,41 chainDanRer7,768 chainFr3,768 chainGalGal6,768 chainGasAcu1,768 chainHg19,768 chainMm10,768 chainNetDanRer7,771 chainNetFr3,771 chainNetGalGal6,771 chainNetGasAcu1,771 chainNetHg19,771 chainNetMm10,771 chainNetOryLat2,777 chainOryLat2,774 ensGene,24 genscan,56 genscan,74 mrna,38 netDanRer7,768 netFr3,768 netGalGal6,768 netGasAcu1,768 netHg19,768 netMm10,768 netOryLat2,774 transMapEnsemblV5,104 transMapEnsemblV5,522 transMapEnsemblV5,583 transMapEstV5,73 transMapEstV5,491 transMapEstV5,552 transMapRefSeqV5,73 transMapRefSeqV5,491 transMapRefSeqV5,552 transMapRnaV5,73 transMapRnaV5,491 transMapRnaV5,552 transMapV5,13 transMapV5,179 transMapV5,597 transMapV5,658 uniprot,91 uniprot,123 uniprot,206 uniprot,409 uniprot,1643 xenoMrna,42 xenoRefGene,54 traditional chainDanRer7,84 chainFr3,84 chainGalGal6,84 chainGasAcu1,84 chainHg19,84 chainMm10,84 chainNetDanRer7,87 chainNetFr3,87 chainNetGalGal6,87 chainNetGasAcu1,87 chainNetHg19,87 chainNetMm10,87 chainNetOryLat2,91 chainOryLat2,88 netDanRer7,84 netFr3,84 netGalGal6,84 netGasAcu1,84 netHg19,84 netMm10,84 netOryLat2,88 trained augustusGene,150 training augustusGene,162 augustusGene,176 augustusGene,180 augustusGene,199 augustusGene,228 augustusGene,243 augustusGene,259 augustusGene,273 transcript transMapEnsemblV5,153 transMapEnsemblV5,324 transMapEnsemblV5,377 transMapEstV5,122 transMapEstV5,293 transMapEstV5,346 transMapRefSeqV5,122 transMapRefSeqV5,293 transMapRefSeqV5,346 transMapRnaV5,122 transMapRnaV5,293 transMapRnaV5,346 transMapV5,228 transMapV5,399 transMapV5,452 uniprot,837 uniprot,908 uniprot,918 uniprot,945 uniprot,963 uniprot,1003 uniprot,1076 uniprot,1223 uniprot,1237 uniprot,1249 uniprot,1263 uniprot,1268 uniprot,1291 uniprot,1325 uniprot,1596 uniprot,1610 uniprot,1623 transcript-genome uniprot,813 uniprot,1619 transcript-to-genome uniprot,806 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 transcriptional genscan,28 tRNAs,497 transcripts augustusGene,124 transMapEnsemblV5,341 transMapEstV5,310 transMapRefSeqV5,310 transMapRnaV5,310 transMapV5,416 uniprot,786 uniprot,833 uniprot,928 uniprot,936 uniprot,957 uniprot,985 uniprot,992 uniprot,1011 uniprot,1022 uniprot,1032 uniprot,1056 uniprot,1069 uniprot,1091 uniprot,1096 uniprot,1108 uniprot,1127 uniprot,1168 uniprot,1338 uniprot,1474 xenoRefGene,376 transfer tRNAs,3 tRNAs,374 tRNAs,451 translated transMapV5,155 xenoMrna,14 xenoMrna,79 xenoMrna,99 xenoMrna,427 translation augustusGene,57 tRNAs,159 tRNAs,195 translational genscan,29 transmap transMapEnsemblV5,1 transMapEnsemblV5,3 transMapEnsemblV5,25 transMapEnsemblV5,440 transMapEnsemblV5,499 transMapEnsemblV5,588 transMapEnsemblV5,591 transMapEnsemblV5,594 transMapEnsemblV5,597 transMapEnsemblV5,663 transMapEstV5,1 transMapEstV5,3 transMapEstV5,23 transMapEstV5,409 transMapEstV5,468 transMapEstV5,557 transMapEstV5,560 transMapEstV5,563 transMapEstV5,566 transMapEstV5,632 transMapRefSeqV5,1 transMapRefSeqV5,3 transMapRefSeqV5,23 transMapRefSeqV5,409 transMapRefSeqV5,468 transMapRefSeqV5,557 transMapRefSeqV5,560 transMapRefSeqV5,563 transMapRefSeqV5,566 transMapRefSeqV5,632 transMapRnaV5,1 transMapRnaV5,3 transMapRnaV5,23 transMapRnaV5,409 transMapRnaV5,468 transMapRnaV5,557 transMapRnaV5,560 transMapRnaV5,563 transMapRnaV5,566 transMapRnaV5,632 transMapV5,1 transMapV5,3 transMapV5,22 transMapV5,70 transMapV5,100 transMapV5,157 transMapV5,515 transMapV5,574 transMapV5,663 transMapV5,666 transMapV5,669 transMapV5,672 transMapV5,738 transmembrane unipLocTransMemb,1 unipLocTransMemb,3 uniprot,265 uniprot,273 uniprot,515 uniprot,567 transposable nestedRepeats,379 transposons chainDanRer7,565 chainDanRer7,589 chainDanRer7,898 chainFr3,565 chainFr3,589 chainFr3,898 chainGalGal6,565 chainGalGal6,589 chainGalGal6,898 chainGasAcu1,565 chainGasAcu1,589 chainGasAcu1,898 chainHg19,565 chainHg19,589 chainHg19,898 chainMm10,565 chainMm10,589 chainMm10,898 chainNetDanRer7,568 chainNetDanRer7,592 chainNetDanRer7,901 chainNetFr3,568 chainNetFr3,592 chainNetFr3,901 chainNetGalGal6,568 chainNetGalGal6,592 chainNetGalGal6,901 chainNetGasAcu1,568 chainNetGasAcu1,592 chainNetGasAcu1,901 chainNetHg19,568 chainNetHg19,592 chainNetHg19,901 chainNetMm10,568 chainNetMm10,592 chainNetMm10,901 chainNetOryLat2,574 chainNetOryLat2,598 chainNetOryLat2,907 chainOryLat2,571 chainOryLat2,595 chainOryLat2,904 netDanRer7,565 netDanRer7,589 netDanRer7,898 netFr3,565 netFr3,589 netFr3,898 netGalGal6,565 netGalGal6,589 netGalGal6,898 netGasAcu1,565 netGasAcu1,589 netGasAcu1,898 netHg19,565 netHg19,589 netHg19,898 netMm10,565 netMm10,589 netMm10,898 netOryLat2,571 netOryLat2,595 netOryLat2,904 treat tRNAs,279 trembl unipAliTrembl,1 unipAliTrembl,6 uniprot,4 uniprot,44 uniprot,79 uniprot,185 uniprot,192 uniprot,199 uniprot,211 uniprot,500 uniprot,604 uniprot,661 trends nestedRepeats,353 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 tried uniprot,869 trimming chainDanRer7,796 chainFr3,796 chainGalGal6,796 chainGasAcu1,796 chainHg19,796 chainMm10,796 chainNetDanRer7,799 chainNetFr3,799 chainNetGalGal6,799 chainNetGasAcu1,799 chainNetHg19,799 chainNetMm10,799 chainNetOryLat2,805 chainOryLat2,802 netDanRer7,796 netFr3,796 netGalGal6,796 netGasAcu1,796 netHg19,796 netMm10,796 netOryLat2,802 trna tRNAs,1 tRNAs,17 tRNAs,50 tRNAs,98 tRNAs,109 tRNAs,132 tRNAs,140 tRNAs,146 tRNAs,173 tRNAs,275 tRNAs,285 tRNAs,313 tRNAs,342 tRNAs,423 tRNAs,484 trna-derived tRNAs,149 tRNAs,301 trnas tRNAs,84 tRNAs,161 tRNAs,196 tRNAs,225 trnascan tRNAs,31 trnascan-se tRNAs,8 tRNAs,22 tRNAs,24 tRNAs,115 tRNAs,330 tRNAs,444 true augustusGene,132 tRNAs,83 windowmaskerSdust,60 windowmaskerSdust,69 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 turn chainDanRer7,332 chainFr3,332 chainGalGal6,332 chainGasAcu1,332 chainHg19,332 chainMm10,332 chainNetDanRer7,335 chainNetFr3,335 chainNetGalGal6,335 chainNetGasAcu1,335 chainNetHg19,335 chainNetMm10,335 chainNetOryLat2,341 chainOryLat2,338 cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 netDanRer7,332 netFr3,332 netGalGal6,332 netGasAcu1,332 netHg19,332 netMm10,332 netOryLat2,338 xenoRefGene,131 turns uniprot,370 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 two chainDanRer7,904 chainFr3,904 chainGalGal6,904 chainGasAcu1,904 chainHg19,904 chainMm10,904 chainNetDanRer7,907 chainNetFr3,907 chainNetGalGal6,907 chainNetGasAcu1,907 chainNetHg19,907 chainNetMm10,907 chainNetOryLat2,913 chainOryLat2,910 gold,118 netDanRer7,904 netFr3,904 netGalGal6,904 netGasAcu1,904 netHg19,904 netMm10,904 netOryLat2,910 transMapEnsemblV5,452 transMapEnsemblV5,489 transMapEstV5,421 transMapEstV5,458 transMapRefSeqV5,421 transMapRefSeqV5,458 transMapRnaV5,421 transMapRnaV5,458 transMapV5,527 transMapV5,564 uniprot,71 uniprot,630 uniprot,1641 xenoMrna,67 xenoMrna,104 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 type gold,169 mrna,113 mrna,143 uniprot,65 uniprot,271 uniprot,464 uniprot,614 xenoMrna,187 xenoMrna,217 types augustusGene,89 chainDanRer7,504 chainFr3,504 chainGalGal6,504 chainGasAcu1,504 chainHg19,504 chainMm10,504 chainNetDanRer7,507 chainNetFr3,507 chainNetGalGal6,507 chainNetGasAcu1,507 chainNetHg19,507 chainNetMm10,507 chainNetOryLat2,513 chainOryLat2,510 gap,69 mrna,192 netDanRer7,504 netFr3,504 netGalGal6,504 netGasAcu1,504 netHg19,504 netMm10,504 netOryLat2,510 transMapEnsemblV5,138 transMapEstV5,107 transMapRefSeqV5,107 transMapRnaV5,107 transMapV5,213 uniprot,676 xenoMrna,266 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 tRNAs,311 typically cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 gc5Base,33 u chainDanRer7,1067 chainFr3,1067 chainGalGal6,1067 chainGasAcu1,1067 chainHg19,1067 chainMm10,1067 chainNetDanRer7,1070 chainNetFr3,1070 chainNetGalGal6,1070 chainNetGasAcu1,1070 chainNetHg19,1070 chainNetMm10,1070 chainNetOryLat2,1076 chainOryLat2,1073 netDanRer7,1067 netFr3,1067 netGalGal6,1067 netGasAcu1,1067 netHg19,1067 netMm10,1067 netOryLat2,1073 ucsc blastHg18KG,32 blastHg18KG,43 mrna,405 nestedRepeats,245 tRNAs,340 transMapEnsemblV5,35 transMapEnsemblV5,162 transMapEnsemblV5,183 transMapEnsemblV5,682 transMapEstV5,33 transMapEstV5,131 transMapEstV5,152 transMapEstV5,651 transMapRefSeqV5,33 transMapRefSeqV5,131 transMapRefSeqV5,152 transMapRefSeqV5,651 transMapRnaV5,33 transMapRnaV5,131 transMapRnaV5,152 transMapRnaV5,651 transMapV5,32 transMapV5,237 transMapV5,258 transMapV5,757 unipAliSwissprot,3 unipAliTrembl,3 uniprot,107 uniprot,190 uniprot,773 uniprot,826 uniprot,827 uniprot,844 uniprot,1206 uniprot,1275 uniprot,1668 uniprot,1947 xenoMrna,474 xenoRefGene,283 ultracontigs gold,147 gold,159 gold,233 undergone xenoRefGene,67 underlies gaze,69 genscan,142 underlying uniprot,1682 xenoRefGene,35 underneath chainDanRer7,832 chainFr3,832 chainGalGal6,832 chainGasAcu1,832 chainHg19,832 chainMm10,832 chainNetDanRer7,835 chainNetFr3,835 chainNetGalGal6,835 chainNetGasAcu1,835 chainNetHg19,835 chainNetMm10,835 chainNetOryLat2,841 chainOryLat2,838 netDanRer7,832 netFr3,832 netGalGal6,832 netGasAcu1,832 netHg19,832 netMm10,832 netOryLat2,838 unexpected uniprot,766 ungapped chainDanRer7,443 chainFr3,443 chainGalGal6,443 chainGasAcu1,443 chainHg19,443 chainMm10,443 chainNetDanRer7,446 chainNetFr3,446 chainNetGalGal6,446 chainNetGasAcu1,446 chainNetHg19,446 chainNetMm10,446 chainNetOryLat2,452 chainOryLat2,449 netDanRer7,443 netFr3,443 netGalGal6,443 netGasAcu1,443 netHg19,443 netMm10,443 netOryLat2,449 uniprot unipChain,2 unipConflict,3 unipDisulfBond,3 unipDomain,2 unipInterest,2 unipLocCytopl,2 unipLocExtra,2 unipLocSignal,3 unipLocTransMemb,2 unipModif,3 unipMut,2 unipOther,3 unipRepeat,2 unipStruct,2 uniprot,1 uniprot,2 uniprot,23 uniprot,30 uniprot,41 uniprot,43 uniprot,68 uniprot,152 uniprot,237 uniprot,253 uniprot,264 uniprot,275 uniprot,286 uniprot,296 uniprot,322 uniprot,332 uniprot,337 uniprot,349 uniprot,358 uniprot,371 uniprot,380 uniprot,382 uniprot,392 uniprot,413 uniprot,424 uniprot,453 uniprot,494 uniprot,529 uniprot,544 uniprot,573 uniprot,669 uniprot,714 uniprot,721 uniprot,738 uniprot,750 uniprot,779 uniprot,924 uniprot,996 uniprot,1016 uniprot,1029 uniprot,1231 uniprot,1437 uniprot,1503 uniprot,1509 uniprot,1513 uniprot,1591 uniprot,1669 uniprot,1702 uniprot,1817 uniprot,1845 uniprot,1910 uniprot,1964 uniprot,1976 uniprot,1985 uniprot,1996 uniprot-annotated uniprot,1279 unipstruct.bb uniprot,1818 uniptogenome.over.chain.gz uniprot,1896 uniprot,1912 uniprot,1934 uniptogenomelift.psl.gz uniprot,1899 unique transMapEnsemblV5,383 transMapEnsemblV5,394 transMapEnsemblV5,431 transMapEnsemblV5,442 transMapEstV5,352 transMapEstV5,363 transMapEstV5,400 transMapEstV5,411 transMapRefSeqV5,352 transMapRefSeqV5,363 transMapRefSeqV5,400 transMapRefSeqV5,411 transMapRnaV5,352 transMapRnaV5,363 transMapRnaV5,400 transMapRnaV5,411 transMapV5,458 transMapV5,469 transMapV5,506 transMapV5,517 uniprot,1600 universal uniprot,1993 university chainDanRer7,918 chainDanRer7,952 chainDanRer7,998 chainDanRer7,1021 chainFr3,918 chainFr3,952 chainFr3,998 chainFr3,1021 chainGalGal6,918 chainGalGal6,952 chainGalGal6,998 chainGalGal6,1021 chainGasAcu1,918 chainGasAcu1,952 chainGasAcu1,998 chainGasAcu1,1021 chainHg19,918 chainHg19,952 chainHg19,998 chainHg19,1021 chainMm10,918 chainMm10,952 chainMm10,998 chainMm10,1021 chainNetDanRer7,921 chainNetDanRer7,955 chainNetDanRer7,1001 chainNetDanRer7,1024 chainNetFr3,921 chainNetFr3,955 chainNetFr3,1001 chainNetFr3,1024 chainNetGalGal6,921 chainNetGalGal6,955 chainNetGalGal6,1001 chainNetGalGal6,1024 chainNetGasAcu1,921 chainNetGasAcu1,955 chainNetGasAcu1,1001 chainNetGasAcu1,1024 chainNetHg19,921 chainNetHg19,955 chainNetHg19,1001 chainNetHg19,1024 chainNetMm10,921 chainNetMm10,955 chainNetMm10,1001 chainNetMm10,1024 chainNetOryLat2,927 chainNetOryLat2,961 chainNetOryLat2,1007 chainNetOryLat2,1030 chainOryLat2,924 chainOryLat2,958 chainOryLat2,1004 chainOryLat2,1027 netDanRer7,918 netDanRer7,952 netDanRer7,998 netDanRer7,1021 netFr3,918 netFr3,952 netFr3,998 netFr3,1021 netGalGal6,918 netGalGal6,952 netGalGal6,998 netGalGal6,1021 netGasAcu1,918 netGasAcu1,952 netGasAcu1,998 netGasAcu1,1021 netHg19,918 netHg19,952 netHg19,998 netHg19,1021 netMm10,918 netMm10,952 netMm10,998 netMm10,1021 netOryLat2,924 netOryLat2,958 netOryLat2,1004 netOryLat2,1027 unknown gap,178 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 unmapped gold,156 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unplaced gold,41 gold,208 unprocessed chainDanRer7,226 chainFr3,226 chainGalGal6,226 chainGasAcu1,226 chainHg19,226 chainMm10,226 chainNetDanRer7,229 chainNetFr3,229 chainNetGalGal6,229 chainNetGasAcu1,229 chainNetHg19,229 chainNetMm10,229 chainNetOryLat2,233 chainOryLat2,230 netDanRer7,226 netFr3,226 netGalGal6,226 netGasAcu1,226 netHg19,226 netMm10,226 netOryLat2,230 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unsequenced chainDanRer7,184 chainFr3,184 chainGalGal6,184 chainGasAcu1,184 chainHg19,184 chainMm10,184 chainNetDanRer7,187 chainNetFr3,187 chainNetGalGal6,187 chainNetGasAcu1,187 chainNetHg19,187 chainNetMm10,187 chainNetOryLat2,191 chainOryLat2,188 netDanRer7,184 netFr3,184 netGalGal6,184 netGasAcu1,184 netHg19,184 netMm10,184 netOryLat2,188 up blastHg18KG,67 update mrna,432 nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 xenoMrna,501 xenoRefGene,341 updated uniprot,1566 xenoRefGene,39 us uniprot,687 uniprot,1441 use gold,85 mrna,110 tRNAs,357 uniprot,991 uniprot,1021 uniprot,1073 uniprot,1225 xenoMrna,184 used augustusGene,146 augustusGene,174 augustusGene,183 augustusGene,231 augustusGene,246 blastHg18KG,186 chainDanRer7,293 chainDanRer7,665 chainDanRer7,696 chainDanRer7,787 chainDanRer7,839 chainDanRer7,872 chainFr3,293 chainFr3,665 chainFr3,696 chainFr3,787 chainFr3,839 chainFr3,872 chainGalGal6,293 chainGalGal6,665 chainGalGal6,696 chainGalGal6,787 chainGalGal6,839 chainGalGal6,872 chainGasAcu1,293 chainGasAcu1,665 chainGasAcu1,696 chainGasAcu1,787 chainGasAcu1,839 chainGasAcu1,872 chainHg19,293 chainHg19,665 chainHg19,696 chainHg19,787 chainHg19,839 chainHg19,872 chainMm10,293 chainMm10,665 chainMm10,696 chainMm10,787 chainMm10,839 chainMm10,872 chainNetDanRer7,296 chainNetDanRer7,668 chainNetDanRer7,699 chainNetDanRer7,790 chainNetDanRer7,842 chainNetDanRer7,875 chainNetFr3,296 chainNetFr3,668 chainNetFr3,699 chainNetFr3,790 chainNetFr3,842 chainNetFr3,875 chainNetGalGal6,296 chainNetGalGal6,668 chainNetGalGal6,699 chainNetGalGal6,790 chainNetGalGal6,842 chainNetGalGal6,875 chainNetGasAcu1,296 chainNetGasAcu1,668 chainNetGasAcu1,699 chainNetGasAcu1,790 chainNetGasAcu1,842 chainNetGasAcu1,875 chainNetHg19,296 chainNetHg19,668 chainNetHg19,699 chainNetHg19,790 chainNetHg19,842 chainNetHg19,875 chainNetMm10,296 chainNetMm10,668 chainNetMm10,699 chainNetMm10,790 chainNetMm10,842 chainNetMm10,875 chainNetOryLat2,300 chainNetOryLat2,674 chainNetOryLat2,705 chainNetOryLat2,796 chainNetOryLat2,848 chainNetOryLat2,881 chainOryLat2,297 chainOryLat2,671 chainOryLat2,702 chainOryLat2,793 chainOryLat2,845 chainOryLat2,878 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 ensGene,36 genscan,159 gold,73 gold,230 mrna,67 mrna,208 mrna,267 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 netDanRer7,293 netDanRer7,665 netDanRer7,696 netDanRer7,787 netDanRer7,839 netDanRer7,872 netFr3,293 netFr3,665 netFr3,696 netFr3,787 netFr3,839 netFr3,872 netGalGal6,293 netGalGal6,665 netGalGal6,696 netGalGal6,787 netGalGal6,839 netGalGal6,872 netGasAcu1,293 netGasAcu1,665 netGasAcu1,696 netGasAcu1,787 netGasAcu1,839 netGasAcu1,872 netHg19,293 netHg19,665 netHg19,696 netHg19,787 netHg19,839 netHg19,872 netMm10,293 netMm10,665 netMm10,696 netMm10,787 netMm10,839 netMm10,872 netOryLat2,297 netOryLat2,671 netOryLat2,702 netOryLat2,793 netOryLat2,845 netOryLat2,878 transMapEnsemblV5,56 transMapEnsemblV5,64 transMapEnsemblV5,186 transMapEnsemblV5,238 transMapEnsemblV5,243 transMapEnsemblV5,263 transMapEnsemblV5,283 transMapEnsemblV5,315 transMapEnsemblV5,647 transMapEstV5,155 transMapEstV5,207 transMapEstV5,212 transMapEstV5,232 transMapEstV5,252 transMapEstV5,284 transMapEstV5,616 transMapRefSeqV5,155 transMapRefSeqV5,207 transMapRefSeqV5,212 transMapRefSeqV5,232 transMapRefSeqV5,252 transMapRefSeqV5,284 transMapRefSeqV5,616 transMapRnaV5,155 transMapRnaV5,207 transMapRnaV5,212 transMapRnaV5,232 transMapRnaV5,252 transMapRnaV5,284 transMapRnaV5,616 transMapV5,69 transMapV5,261 transMapV5,313 transMapV5,318 transMapV5,338 transMapV5,358 transMapV5,390 transMapV5,722 uniprot,1062 uniprot,1087 uniprot,1118 uniprot,1198 uniprot,1210 uniprot,1319 uniprot,1351 uniprot,1550 uniprot,1626 uniprot,1801 uniprot,1883 xenoMrna,141 xenoMrna,282 xenoMrna,341 useful chainDanRer7,278 chainDanRer7,477 chainFr3,278 chainFr3,477 chainGalGal6,278 chainGalGal6,477 chainGasAcu1,278 chainGasAcu1,477 chainHg19,278 chainHg19,477 chainMm10,278 chainMm10,477 chainNetDanRer7,281 chainNetDanRer7,480 chainNetFr3,281 chainNetFr3,480 chainNetGalGal6,281 chainNetGalGal6,480 chainNetGasAcu1,281 chainNetGasAcu1,480 chainNetHg19,281 chainNetHg19,480 chainNetMm10,281 chainNetMm10,480 chainNetOryLat2,285 chainNetOryLat2,486 chainOryLat2,282 chainOryLat2,483 microsat,20 netDanRer7,278 netDanRer7,477 netFr3,278 netFr3,477 netGalGal6,278 netGalGal6,477 netGasAcu1,278 netGasAcu1,477 netHg19,278 netHg19,477 netMm10,278 netMm10,477 netOryLat2,282 netOryLat2,483 user mrna,326 transMapEnsemblV5,120 transMapEstV5,89 transMapRefSeqV5,89 transMapRnaV5,89 transMapV5,195 xenoMrna,400 users uniprot,406 uniprot,684 xenoRefGene,148 uses tRNAs,30 using augustusGene,294 blastHg18KG,52 blastHg18KG,76 blastHg18KG,88 chainDanRer7,74 chainDanRer7,602 chainDanRer7,761 chainFr3,74 chainFr3,602 chainFr3,761 chainGalGal6,74 chainGalGal6,602 chainGalGal6,761 chainGasAcu1,74 chainGasAcu1,602 chainGasAcu1,761 chainHg19,74 chainHg19,602 chainHg19,761 chainMm10,74 chainMm10,602 chainMm10,761 chainNetDanRer7,77 chainNetDanRer7,605 chainNetDanRer7,764 chainNetFr3,77 chainNetFr3,605 chainNetFr3,764 chainNetGalGal6,77 chainNetGalGal6,605 chainNetGalGal6,764 chainNetGasAcu1,77 chainNetGasAcu1,605 chainNetGasAcu1,764 chainNetHg19,77 chainNetHg19,605 chainNetHg19,764 chainNetMm10,77 chainNetMm10,605 chainNetMm10,764 chainNetOryLat2,81 chainNetOryLat2,611 chainNetOryLat2,770 chainOryLat2,78 chainOryLat2,608 chainOryLat2,767 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 ensGene,64 gap,111 gaze,5 gaze,31 gaze,111 gold,180 microsat,90 mrna,352 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 netDanRer7,74 netDanRer7,602 netDanRer7,761 netFr3,74 netFr3,602 netFr3,761 netGalGal6,74 netGalGal6,602 netGalGal6,761 netGasAcu1,74 netGasAcu1,602 netGasAcu1,761 netHg19,74 netHg19,602 netHg19,761 netMm10,74 netMm10,602 netMm10,761 netOryLat2,78 netOryLat2,608 netOryLat2,767 tRNAs,21 tRNAs,401 transMapEnsemblV5,75 transMapEnsemblV5,561 transMapEnsemblV5,610 transMapEnsemblV5,762 transMapEstV5,44 transMapEstV5,530 transMapEstV5,579 transMapEstV5,731 transMapRefSeqV5,44 transMapRefSeqV5,530 transMapRefSeqV5,579 transMapRefSeqV5,731 transMapRnaV5,44 transMapRnaV5,530 transMapRnaV5,579 transMapRnaV5,731 transMapV5,43 transMapV5,81 transMapV5,124 transMapV5,135 transMapV5,142 transMapV5,636 transMapV5,685 transMapV5,837 uniprot,217 uniprot,722 uniprot,1526 xenoMrna,426 xenoRefGene,224 ustat windowmaskerSdust,66 usually gap,129 nestedRepeats,192 tRNAs,239 tRNAs,307 transMapEnsemblV5,502 transMapEstV5,471 transMapRefSeqV5,471 transMapRnaV5,471 transMapV5,577 ut chainNetOryLat2,8 chainNetOryLat2,74 chainNetOryLat2,310 chainNetOryLat2Viewchain,6 chainNetOryLat2Viewnet,6 chainOryLat2,7 chainOryLat2,71 chainOryLat2,307 netOryLat2,7 netOryLat2,71 netOryLat2,307 utilities blastHg18KG,185 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 utr transMapV5,164 v ensGene,185 v.1.23 tRNAs,23 v3.1 augustusGene,7 v4 transMapEnsemblV5,664 transMapEstV5,633 transMapRefSeqV5,633 transMapRnaV5,633 v5 transMapV5,2 transMapV5,739 v8 gold,15 gold,274 valid mrna,158 xenoMrna,232 validate xenoRefGene,151 validation genscan,107 value mrna,218 xenoMrna,292 variant uniprot,2026 variants uniprot,357 uniprot,415 uniprot,425 uniprot,533 uniprot,943 uniprot,2042 variation microsat,7 nestedRepeats,11 simpleRepeat,8 uniprot,438 windowmaskerSdust,9 variety gc5Base,45 various uniprot,50 varying gap,118 vb chainDanRer7,1025 chainFr3,1025 chainGalGal6,1025 chainGasAcu1,1025 chainHg19,1025 chainMm10,1025 chainNetDanRer7,1028 chainNetFr3,1028 chainNetGalGal6,1028 chainNetGasAcu1,1028 chainNetHg19,1028 chainNetMm10,1028 chainNetOryLat2,1034 chainOryLat2,1031 netDanRer7,1025 netFr3,1025 netGalGal6,1025 netGasAcu1,1025 netHg19,1025 netMm10,1025 netOryLat2,1031 version augustusGene,23 augustusGene,263 cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 transMapEnsemblV5,8 transMapEstV5,6 transMapRefSeqV5,7 transMapRnaV5,7 transMapV5,5 uniprot,1254 uniprot,1297 uniprot,1576 uniprot,1593 versions augustusGene,279 ensGene,133 nestedRepeats,251 nestedRepeats,267 uniprot,1655 vertebrate cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 tRNAs,160 transMapEnsemblV5,31 transMapEnsemblV5,158 transMapEnsemblV5,191 transMapEstV5,29 transMapEstV5,127 transMapEstV5,160 transMapRefSeqV5,29 transMapRefSeqV5,127 transMapRefSeqV5,160 transMapRnaV5,29 transMapRnaV5,127 transMapRnaV5,160 transMapV5,28 transMapV5,113 transMapV5,233 transMapV5,266 xenoMrna,18 vertebrates augustusGene,209 cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 very uniprot,977 uniprot,1185 uniprot,1399 uniprot,1402 via transMapEnsemblV5,326 transMapEstV5,295 transMapRefSeqV5,295 transMapRnaV5,295 transMapV5,401 uniprot,1293 view chainDanRer7,454 chainFr3,454 chainGalGal6,454 chainGasAcu1,454 chainHg19,454 chainMm10,454 chainNetDanRer7,457 chainNetFr3,457 chainNetGalGal6,457 chainNetGasAcu1,457 chainNetHg19,457 chainNetMm10,457 chainNetOryLat2,463 chainOryLat2,460 cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 mrna,154 netDanRer7,454 netFr3,454 netGalGal6,454 netGasAcu1,454 netHg19,454 netMm10,454 netOryLat2,460 xenoMrna,228 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 uniprot,147 w blastHg18KG,156 blastHg18KG,158 chainDanRer7,1027 chainDanRer7,1047 chainDanRer7,1095 chainFr3,1027 chainFr3,1047 chainFr3,1095 chainGalGal6,1027 chainGalGal6,1047 chainGalGal6,1095 chainGasAcu1,1027 chainGasAcu1,1047 chainGasAcu1,1095 chainHg19,1027 chainHg19,1047 chainHg19,1095 chainMm10,1027 chainMm10,1047 chainMm10,1095 chainNetDanRer7,1030 chainNetDanRer7,1050 chainNetDanRer7,1098 chainNetFr3,1030 chainNetFr3,1050 chainNetFr3,1098 chainNetGalGal6,1030 chainNetGalGal6,1050 chainNetGalGal6,1098 chainNetGasAcu1,1030 chainNetGasAcu1,1050 chainNetGasAcu1,1098 chainNetHg19,1030 chainNetHg19,1050 chainNetHg19,1098 chainNetMm10,1030 chainNetMm10,1050 chainNetMm10,1098 chainNetOryLat2,1036 chainNetOryLat2,1056 chainNetOryLat2,1104 chainOryLat2,1033 chainOryLat2,1053 chainOryLat2,1101 gold,171 netDanRer7,1027 netDanRer7,1047 netDanRer7,1095 netFr3,1027 netFr3,1047 netFr3,1095 netGalGal6,1027 netGalGal6,1047 netGalGal6,1095 netGasAcu1,1027 netGasAcu1,1047 netGasAcu1,1095 netHg19,1027 netHg19,1047 netHg19,1095 netMm10,1027 netMm10,1047 netMm10,1095 netOryLat2,1033 netOryLat2,1053 netOryLat2,1101 waack augustusGene,318 want uniprot,690 was augustusGene,230 augustusGene,245 augustusGene,264 augustusGene,280 blastHg18KG,178 chainDanRer7,646 chainDanRer7,664 chainDanRer7,785 chainDanRer7,830 chainDanRer7,838 chainDanRer7,858 chainDanRer7,870 chainDanRer7,895 chainDanRer7,913 chainDanRer7,948 chainFr3,646 chainFr3,664 chainFr3,785 chainFr3,830 chainFr3,838 chainFr3,858 chainFr3,870 chainFr3,895 chainFr3,913 chainFr3,948 chainGalGal6,646 chainGalGal6,664 chainGalGal6,785 chainGalGal6,830 chainGalGal6,838 chainGalGal6,858 chainGalGal6,870 chainGalGal6,895 chainGalGal6,913 chainGalGal6,948 chainGasAcu1,646 chainGasAcu1,664 chainGasAcu1,785 chainGasAcu1,830 chainGasAcu1,838 chainGasAcu1,858 chainGasAcu1,870 chainGasAcu1,895 chainGasAcu1,913 chainGasAcu1,948 chainHg19,646 chainHg19,664 chainHg19,785 chainHg19,830 chainHg19,838 chainHg19,858 chainHg19,870 chainHg19,895 chainHg19,913 chainHg19,948 chainMm10,646 chainMm10,664 chainMm10,785 chainMm10,830 chainMm10,838 chainMm10,858 chainMm10,870 chainMm10,895 chainMm10,913 chainMm10,948 chainNetDanRer7,649 chainNetDanRer7,667 chainNetDanRer7,788 chainNetDanRer7,833 chainNetDanRer7,841 chainNetDanRer7,861 chainNetDanRer7,873 chainNetDanRer7,898 chainNetDanRer7,916 chainNetDanRer7,951 chainNetFr3,649 chainNetFr3,667 chainNetFr3,788 chainNetFr3,833 chainNetFr3,841 chainNetFr3,861 chainNetFr3,873 chainNetFr3,898 chainNetFr3,916 chainNetFr3,951 chainNetGalGal6,649 chainNetGalGal6,667 chainNetGalGal6,788 chainNetGalGal6,833 chainNetGalGal6,841 chainNetGalGal6,861 chainNetGalGal6,873 chainNetGalGal6,898 chainNetGalGal6,916 chainNetGalGal6,951 chainNetGasAcu1,649 chainNetGasAcu1,667 chainNetGasAcu1,788 chainNetGasAcu1,833 chainNetGasAcu1,841 chainNetGasAcu1,861 chainNetGasAcu1,873 chainNetGasAcu1,898 chainNetGasAcu1,916 chainNetGasAcu1,951 chainNetHg19,649 chainNetHg19,667 chainNetHg19,788 chainNetHg19,833 chainNetHg19,841 chainNetHg19,861 chainNetHg19,873 chainNetHg19,898 chainNetHg19,916 chainNetHg19,951 chainNetMm10,649 chainNetMm10,667 chainNetMm10,788 chainNetMm10,833 chainNetMm10,841 chainNetMm10,861 chainNetMm10,873 chainNetMm10,898 chainNetMm10,916 chainNetMm10,951 chainNetOryLat2,655 chainNetOryLat2,673 chainNetOryLat2,794 chainNetOryLat2,839 chainNetOryLat2,847 chainNetOryLat2,867 chainNetOryLat2,879 chainNetOryLat2,904 chainNetOryLat2,922 chainNetOryLat2,957 chainOryLat2,652 chainOryLat2,670 chainOryLat2,791 chainOryLat2,836 chainOryLat2,844 chainOryLat2,864 chainOryLat2,876 chainOryLat2,901 chainOryLat2,919 chainOryLat2,954 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 gaze,104 gold,178 gold,280 microsat,108 mrna,371 mrna,402 netDanRer7,646 netDanRer7,664 netDanRer7,785 netDanRer7,830 netDanRer7,838 netDanRer7,858 netDanRer7,870 netDanRer7,895 netDanRer7,913 netDanRer7,948 netFr3,646 netFr3,664 netFr3,785 netFr3,830 netFr3,838 netFr3,858 netFr3,870 netFr3,895 netFr3,913 netFr3,948 netGalGal6,646 netGalGal6,664 netGalGal6,785 netGalGal6,830 netGalGal6,838 netGalGal6,858 netGalGal6,870 netGalGal6,895 netGalGal6,913 netGalGal6,948 netGasAcu1,646 netGasAcu1,664 netGasAcu1,785 netGasAcu1,830 netGasAcu1,838 netGasAcu1,858 netGasAcu1,870 netGasAcu1,895 netGasAcu1,913 netGasAcu1,948 netHg19,646 netHg19,664 netHg19,785 netHg19,830 netHg19,838 netHg19,858 netHg19,870 netHg19,895 netHg19,913 netHg19,948 netMm10,646 netMm10,664 netMm10,785 netMm10,830 netMm10,838 netMm10,858 netMm10,870 netMm10,895 netMm10,913 netMm10,948 netOryLat2,652 netOryLat2,670 netOryLat2,791 netOryLat2,836 netOryLat2,844 netOryLat2,864 netOryLat2,876 netOryLat2,901 netOryLat2,919 netOryLat2,954 simpleRepeat,68 transMapEnsemblV5,220 transMapEnsemblV5,237 transMapEnsemblV5,282 transMapEnsemblV5,314 transMapEnsemblV5,676 transMapEstV5,189 transMapEstV5,206 transMapEstV5,251 transMapEstV5,283 transMapEstV5,645 transMapRefSeqV5,189 transMapRefSeqV5,206 transMapRefSeqV5,251 transMapRefSeqV5,283 transMapRefSeqV5,645 transMapRnaV5,189 transMapRnaV5,206 transMapRnaV5,251 transMapRnaV5,283 transMapRnaV5,645 transMapV5,295 transMapV5,312 transMapV5,357 transMapV5,389 transMapV5,751 uniprot,799 uniprot,815 uniprot,1354 uniprot,1625 uniprot,1941 windowmaskerSdust,52 windowmaskerSdust,78 xenoMrna,444 xenoMrna,471 xenoRefGene,251 xenoRefGene,280 way transMapEnsemblV5,587 transMapEstV5,556 transMapRefSeqV5,556 transMapRnaV5,556 transMapV5,662 uniprot,1459 ways gc5Base,47 we ensGene,146 uniprot,1224 uniprot,1453 uniprot,1859 webb chainDanRer7,927 chainDanRer7,964 chainFr3,927 chainFr3,964 chainGalGal6,927 chainGalGal6,964 chainGasAcu1,927 chainGasAcu1,964 chainHg19,927 chainHg19,964 chainMm10,927 chainMm10,964 chainNetDanRer7,930 chainNetDanRer7,967 chainNetFr3,930 chainNetFr3,967 chainNetGalGal6,930 chainNetGalGal6,967 chainNetGasAcu1,930 chainNetGasAcu1,967 chainNetHg19,930 chainNetHg19,967 chainNetMm10,930 chainNetMm10,967 chainNetOryLat2,936 chainNetOryLat2,973 chainOryLat2,933 chainOryLat2,970 netDanRer7,927 netDanRer7,964 netFr3,927 netFr3,964 netGalGal6,927 netGalGal6,964 netGasAcu1,927 netGasAcu1,964 netHg19,927 netHg19,964 netMm10,927 netMm10,964 netOryLat2,933 netOryLat2,970 weekly xenoRefGene,40 weight tRNAs,493 well augustusGene,78 cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 genscan,36 were augustusGene,50 augustusGene,66 augustusGene,125 augustusGene,149 augustusGene,182 blastHg18KG,46 blastHg18KG,70 blastHg18KG,85 blastHg18KG,112 blastHg18KG,134 blastHg18KG,191 chainDanRer7,575 chainDanRer7,583 chainDanRer7,590 chainDanRer7,597 chainDanRer7,609 chainDanRer7,682 chainDanRer7,756 chainDanRer7,936 chainDanRer7,980 chainDanRer7,994 chainFr3,575 chainFr3,583 chainFr3,590 chainFr3,597 chainFr3,609 chainFr3,682 chainFr3,756 chainFr3,936 chainFr3,980 chainFr3,994 chainGalGal6,575 chainGalGal6,583 chainGalGal6,590 chainGalGal6,597 chainGalGal6,609 chainGalGal6,682 chainGalGal6,756 chainGalGal6,936 chainGalGal6,980 chainGalGal6,994 chainGasAcu1,575 chainGasAcu1,583 chainGasAcu1,590 chainGasAcu1,597 chainGasAcu1,609 chainGasAcu1,682 chainGasAcu1,756 chainGasAcu1,936 chainGasAcu1,980 chainGasAcu1,994 chainHg19,575 chainHg19,583 chainHg19,590 chainHg19,597 chainHg19,609 chainHg19,682 chainHg19,756 chainHg19,936 chainHg19,980 chainHg19,994 chainMm10,575 chainMm10,583 chainMm10,590 chainMm10,597 chainMm10,609 chainMm10,682 chainMm10,756 chainMm10,936 chainMm10,980 chainMm10,994 chainNetDanRer7,578 chainNetDanRer7,586 chainNetDanRer7,593 chainNetDanRer7,600 chainNetDanRer7,612 chainNetDanRer7,685 chainNetDanRer7,759 chainNetDanRer7,939 chainNetDanRer7,983 chainNetDanRer7,997 chainNetFr3,578 chainNetFr3,586 chainNetFr3,593 chainNetFr3,600 chainNetFr3,612 chainNetFr3,685 chainNetFr3,759 chainNetFr3,939 chainNetFr3,983 chainNetFr3,997 chainNetGalGal6,578 chainNetGalGal6,586 chainNetGalGal6,593 chainNetGalGal6,600 chainNetGalGal6,612 chainNetGalGal6,685 chainNetGalGal6,759 chainNetGalGal6,939 chainNetGalGal6,983 chainNetGalGal6,997 chainNetGasAcu1,578 chainNetGasAcu1,586 chainNetGasAcu1,593 chainNetGasAcu1,600 chainNetGasAcu1,612 chainNetGasAcu1,685 chainNetGasAcu1,759 chainNetGasAcu1,939 chainNetGasAcu1,983 chainNetGasAcu1,997 chainNetHg19,578 chainNetHg19,586 chainNetHg19,593 chainNetHg19,600 chainNetHg19,612 chainNetHg19,685 chainNetHg19,759 chainNetHg19,939 chainNetHg19,983 chainNetHg19,997 chainNetMm10,578 chainNetMm10,586 chainNetMm10,593 chainNetMm10,600 chainNetMm10,612 chainNetMm10,685 chainNetMm10,759 chainNetMm10,939 chainNetMm10,983 chainNetMm10,997 chainNetOryLat2,584 chainNetOryLat2,592 chainNetOryLat2,599 chainNetOryLat2,606 chainNetOryLat2,618 chainNetOryLat2,691 chainNetOryLat2,765 chainNetOryLat2,945 chainNetOryLat2,989 chainNetOryLat2,1003 chainOryLat2,581 chainOryLat2,589 chainOryLat2,596 chainOryLat2,603 chainOryLat2,615 chainOryLat2,688 chainOryLat2,762 chainOryLat2,942 chainOryLat2,986 chainOryLat2,1000 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 ensGene,13 gap,159 gap,186 gaze,29 gc5Base,79 gold,229 mrna,347 mrna,395 netDanRer7,575 netDanRer7,583 netDanRer7,590 netDanRer7,597 netDanRer7,609 netDanRer7,682 netDanRer7,756 netDanRer7,936 netDanRer7,980 netDanRer7,994 netFr3,575 netFr3,583 netFr3,590 netFr3,597 netFr3,609 netFr3,682 netFr3,756 netFr3,936 netFr3,980 netFr3,994 netGalGal6,575 netGalGal6,583 netGalGal6,590 netGalGal6,597 netGalGal6,609 netGalGal6,682 netGalGal6,756 netGalGal6,936 netGalGal6,980 netGalGal6,994 netGasAcu1,575 netGasAcu1,583 netGasAcu1,590 netGasAcu1,597 netGasAcu1,609 netGasAcu1,682 netGasAcu1,756 netGasAcu1,936 netGasAcu1,980 netGasAcu1,994 netHg19,575 netHg19,583 netHg19,590 netHg19,597 netHg19,609 netHg19,682 netHg19,756 netHg19,936 netHg19,980 netHg19,994 netMm10,575 netMm10,583 netMm10,590 netMm10,597 netMm10,609 netMm10,682 netMm10,756 netMm10,936 netMm10,980 netMm10,994 netOryLat2,581 netOryLat2,589 netOryLat2,596 netOryLat2,603 netOryLat2,615 netOryLat2,688 netOryLat2,762 netOryLat2,942 netOryLat2,986 netOryLat2,1000 tRNAs,345 transMapEnsemblV5,155 transMapEnsemblV5,185 transMapEnsemblV5,211 transMapEnsemblV5,242 transMapEnsemblV5,248 transMapEnsemblV5,262 transMapEnsemblV5,348 transMapEnsemblV5,379 transMapEnsemblV5,392 transMapEstV5,124 transMapEstV5,154 transMapEstV5,180 transMapEstV5,211 transMapEstV5,217 transMapEstV5,231 transMapEstV5,317 transMapEstV5,348 transMapEstV5,361 transMapRefSeqV5,124 transMapRefSeqV5,154 transMapRefSeqV5,180 transMapRefSeqV5,211 transMapRefSeqV5,217 transMapRefSeqV5,231 transMapRefSeqV5,317 transMapRefSeqV5,348 transMapRefSeqV5,361 transMapRnaV5,124 transMapRnaV5,154 transMapRnaV5,180 transMapRnaV5,211 transMapRnaV5,217 transMapRnaV5,231 transMapRnaV5,317 transMapRnaV5,348 transMapRnaV5,361 transMapV5,115 transMapV5,128 transMapV5,230 transMapV5,260 transMapV5,286 transMapV5,317 transMapV5,323 transMapV5,337 transMapV5,423 transMapV5,454 transMapV5,467 uniprot,782 uniprot,794 uniprot,930 uniprot,937 uniprot,1386 uniprot,1471 uniprot,1505 uniprot,1515 xenoMrna,420 xenoMrna,465 xenoRefGene,218 xenoRefGene,234 xenoRefGene,275 wget uniprot,1903 uniprot,1913 wgs gold,173 gold,185 gold,256 what tRNAs,112 wheeler mrna,429 xenoMrna,498 when augustusGene,188 augustusGene,238 chainDanRer7,405 chainFr3,405 chainGalGal6,405 chainGasAcu1,405 chainHg19,405 chainMm10,405 chainNetDanRer7,408 chainNetFr3,408 chainNetGalGal6,408 chainNetGasAcu1,408 chainNetHg19,408 chainNetMm10,408 chainNetOryLat2,414 chainOryLat2,411 gap,161 mrna,90 mrna,100 mrna,356 netDanRer7,405 netFr3,405 netGalGal6,405 netGasAcu1,405 netHg19,405 netMm10,405 netOryLat2,411 tRNAs,355 transMapEnsemblV5,465 transMapEstV5,434 transMapRefSeqV5,434 transMapRnaV5,434 transMapV5,540 uniprot,951 uniprot,1202 uniprot,1632 xenoMrna,164 xenoMrna,174 xenoMrna,429 xenoRefGene,236 where chainDanRer7,191 chainFr3,191 chainGalGal6,191 chainGasAcu1,191 chainHg19,191 chainMm10,191 chainNetDanRer7,194 chainNetFr3,194 chainNetGalGal6,194 chainNetGasAcu1,194 chainNetHg19,194 chainNetMm10,194 chainNetOryLat2,198 chainOryLat2,195 cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,92 netDanRer7,191 netFr3,191 netGalGal6,191 netGasAcu1,191 netHg19,191 netMm10,191 netOryLat2,195 transMapEnsemblV5,270 transMapEnsemblV5,371 transMapEnsemblV5,420 transMapEnsemblV5,508 transMapEstV5,239 transMapEstV5,340 transMapEstV5,389 transMapEstV5,477 transMapRefSeqV5,239 transMapRefSeqV5,340 transMapRefSeqV5,389 transMapRefSeqV5,477 transMapRnaV5,239 transMapRnaV5,340 transMapRnaV5,389 transMapRnaV5,477 transMapV5,345 transMapV5,446 transMapV5,495 transMapV5,583 uniprot,1192 whether chainDanRer7,854 chainFr3,854 chainGalGal6,854 chainGasAcu1,854 chainHg19,854 chainMm10,854 chainNetDanRer7,857 chainNetFr3,857 chainNetGalGal6,857 chainNetGasAcu1,857 chainNetHg19,857 chainNetMm10,857 chainNetOryLat2,863 chainOryLat2,860 netDanRer7,854 netFr3,854 netGalGal6,854 netGasAcu1,854 netHg19,854 netMm10,854 netOryLat2,860 tRNAs,138 which augustusGene,159 augustusGene,227 chainDanRer7,322 chainDanRer7,613 chainDanRer7,819 chainFr3,322 chainFr3,613 chainFr3,819 chainGalGal6,322 chainGalGal6,613 chainGalGal6,819 chainGasAcu1,322 chainGasAcu1,613 chainGasAcu1,819 chainHg19,322 chainHg19,613 chainHg19,819 chainMm10,322 chainMm10,613 chainMm10,819 chainNetDanRer7,325 chainNetDanRer7,616 chainNetDanRer7,822 chainNetFr3,325 chainNetFr3,616 chainNetFr3,822 chainNetGalGal6,325 chainNetGalGal6,616 chainNetGalGal6,822 chainNetGasAcu1,325 chainNetGasAcu1,616 chainNetGasAcu1,822 chainNetHg19,325 chainNetHg19,616 chainNetHg19,822 chainNetMm10,325 chainNetMm10,616 chainNetMm10,822 chainNetOryLat2,331 chainNetOryLat2,622 chainNetOryLat2,828 chainOryLat2,328 chainOryLat2,619 chainOryLat2,825 cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 gold,49 gold,144 mrna,177 nestedRepeats,31 nestedRepeats,87 netDanRer7,322 netDanRer7,613 netDanRer7,819 netFr3,322 netFr3,613 netFr3,819 netGalGal6,322 netGalGal6,613 netGalGal6,819 netGasAcu1,322 netGasAcu1,613 netGasAcu1,819 netHg19,322 netHg19,613 netHg19,819 netMm10,322 netMm10,613 netMm10,819 netOryLat2,328 netOryLat2,619 netOryLat2,825 simpleRepeat,27 transMapEnsemblV5,614 transMapEstV5,583 transMapRefSeqV5,583 transMapRnaV5,583 transMapV5,144 transMapV5,689 uniprot,158 uniprot,1380 uniprot,1768 xenoMrna,251 while chainDanRer7,214 chainFr3,214 chainGalGal6,214 chainGasAcu1,214 chainHg19,214 chainMm10,214 chainNetDanRer7,217 chainNetFr3,217 chainNetGalGal6,217 chainNetGasAcu1,217 chainNetHg19,217 chainNetMm10,217 chainNetOryLat2,221 chainOryLat2,218 netDanRer7,214 netFr3,214 netGalGal6,214 netGasAcu1,214 netHg19,214 netMm10,214 netOryLat2,218 white gap,52 whole chainDanRer7,462 chainFr3,462 chainGalGal6,462 chainGasAcu1,462 chainHg19,462 chainMm10,462 chainNetDanRer7,465 chainNetFr3,465 chainNetGalGal6,465 chainNetGasAcu1,465 chainNetHg19,465 chainNetMm10,465 chainNetOryLat2,471 chainOryLat2,468 cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 gap,76 gap,107 gold,182 netDanRer7,462 netFr3,462 netGalGal6,462 netGasAcu1,462 netHg19,462 netMm10,462 netOryLat2,468 transMapEnsemblV5,604 transMapEstV5,573 transMapRefSeqV5,573 transMapRnaV5,573 transMapV5,679 whose transMapEnsemblV5,217 transMapEstV5,186 transMapRefSeqV5,186 transMapRnaV5,186 transMapV5,292 xenoMrna,78 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 wildcards mrna,204 xenoMrna,278 will mrna,237 mrna,255 mrna,284 mrna,301 transMapEnsemblV5,61 uniprot,537 uniprot,665 uniprot,754 uniprot,1142 uniprot,1162 xenoMrna,311 xenoMrna,329 xenoMrna,358 xenoMrna,375 window-based windowmaskerSdust,101 windowmasker windowmaskerSdust,7 windowmaskerSdust,21 windowmaskerSdust,23 windowmaskerSdust,51 windowmaskerSdust,58 windowmaskerSdust,65 windowmaskerSdust,100 windowmaskersdust windowmaskerSdust,83 windows gc5Base,7 gc5Base,28 wish mrna,179 xenoMrna,253 xenoRefGene,205 with augustusGene,127 augustusGene,322 blastHg18KG,48 blastHg18KG,72 chainDanRer7,42 chainDanRer7,205 chainDanRer7,216 chainDanRer7,585 chainDanRer7,697 chainDanRer7,773 chainDanRer7,897 chainDanRer7,929 chainDanRer7,961 chainDanRer7,1098 chainFr3,42 chainFr3,205 chainFr3,216 chainFr3,585 chainFr3,697 chainFr3,773 chainFr3,897 chainFr3,929 chainFr3,961 chainFr3,1098 chainGalGal6,42 chainGalGal6,205 chainGalGal6,216 chainGalGal6,585 chainGalGal6,697 chainGalGal6,773 chainGalGal6,897 chainGalGal6,929 chainGalGal6,961 chainGalGal6,1098 chainGasAcu1,42 chainGasAcu1,205 chainGasAcu1,216 chainGasAcu1,585 chainGasAcu1,697 chainGasAcu1,773 chainGasAcu1,897 chainGasAcu1,929 chainGasAcu1,961 chainGasAcu1,1098 chainHg19,42 chainHg19,205 chainHg19,216 chainHg19,585 chainHg19,697 chainHg19,773 chainHg19,897 chainHg19,929 chainHg19,961 chainHg19,1098 chainMm10,42 chainMm10,205 chainMm10,216 chainMm10,585 chainMm10,697 chainMm10,773 chainMm10,897 chainMm10,929 chainMm10,961 chainMm10,1098 chainNetDanRer7,45 chainNetDanRer7,208 chainNetDanRer7,219 chainNetDanRer7,588 chainNetDanRer7,700 chainNetDanRer7,776 chainNetDanRer7,900 chainNetDanRer7,932 chainNetDanRer7,964 chainNetDanRer7,1101 chainNetFr3,45 chainNetFr3,208 chainNetFr3,219 chainNetFr3,588 chainNetFr3,700 chainNetFr3,776 chainNetFr3,900 chainNetFr3,932 chainNetFr3,964 chainNetFr3,1101 chainNetGalGal6,45 chainNetGalGal6,208 chainNetGalGal6,219 chainNetGalGal6,588 chainNetGalGal6,700 chainNetGalGal6,776 chainNetGalGal6,900 chainNetGalGal6,932 chainNetGalGal6,964 chainNetGalGal6,1101 chainNetGasAcu1,45 chainNetGasAcu1,208 chainNetGasAcu1,219 chainNetGasAcu1,588 chainNetGasAcu1,700 chainNetGasAcu1,776 chainNetGasAcu1,900 chainNetGasAcu1,932 chainNetGasAcu1,964 chainNetGasAcu1,1101 chainNetHg19,45 chainNetHg19,208 chainNetHg19,219 chainNetHg19,588 chainNetHg19,700 chainNetHg19,776 chainNetHg19,900 chainNetHg19,932 chainNetHg19,964 chainNetHg19,1101 chainNetMm10,45 chainNetMm10,208 chainNetMm10,219 chainNetMm10,588 chainNetMm10,700 chainNetMm10,776 chainNetMm10,900 chainNetMm10,932 chainNetMm10,964 chainNetMm10,1101 chainNetOryLat2,47 chainNetOryLat2,212 chainNetOryLat2,223 chainNetOryLat2,594 chainNetOryLat2,706 chainNetOryLat2,782 chainNetOryLat2,906 chainNetOryLat2,938 chainNetOryLat2,970 chainNetOryLat2,1107 chainOryLat2,44 chainOryLat2,209 chainOryLat2,220 chainOryLat2,591 chainOryLat2,703 chainOryLat2,779 chainOryLat2,903 chainOryLat2,935 chainOryLat2,967 chainOryLat2,1104 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 gaze,33 gc5Base,35 microsat,69 microsat,76 mrna,391 nestedRepeats,133 netDanRer7,42 netDanRer7,205 netDanRer7,216 netDanRer7,585 netDanRer7,697 netDanRer7,773 netDanRer7,897 netDanRer7,929 netDanRer7,961 netDanRer7,1098 netFr3,42 netFr3,205 netFr3,216 netFr3,585 netFr3,697 netFr3,773 netFr3,897 netFr3,929 netFr3,961 netFr3,1098 netGalGal6,42 netGalGal6,205 netGalGal6,216 netGalGal6,585 netGalGal6,697 netGalGal6,773 netGalGal6,897 netGalGal6,929 netGalGal6,961 netGalGal6,1098 netGasAcu1,42 netGasAcu1,205 netGasAcu1,216 netGasAcu1,585 netGasAcu1,697 netGasAcu1,773 netGasAcu1,897 netGasAcu1,929 netGasAcu1,961 netGasAcu1,1098 netHg19,42 netHg19,205 netHg19,216 netHg19,585 netHg19,697 netHg19,773 netHg19,897 netHg19,929 netHg19,961 netHg19,1098 netMm10,42 netMm10,205 netMm10,216 netMm10,585 netMm10,697 netMm10,773 netMm10,897 netMm10,929 netMm10,961 netMm10,1098 netOryLat2,44 netOryLat2,209 netOryLat2,220 netOryLat2,591 netOryLat2,703 netOryLat2,779 netOryLat2,903 netOryLat2,935 netOryLat2,967 netOryLat2,1104 simpleRepeat,52 tRNAs,7 tRNAs,58 tRNAs,85 tRNAs,119 tRNAs,162 tRNAs,177 tRNAs,197 tRNAs,242 transMapEnsemblV5,51 transMapEnsemblV5,182 transMapEnsemblV5,250 transMapEnsemblV5,350 transMapEnsemblV5,352 transMapEnsemblV5,581 transMapEstV5,151 transMapEstV5,219 transMapEstV5,319 transMapEstV5,321 transMapEstV5,550 transMapRefSeqV5,151 transMapRefSeqV5,219 transMapRefSeqV5,319 transMapRefSeqV5,321 transMapRefSeqV5,550 transMapRnaV5,151 transMapRnaV5,219 transMapRnaV5,319 transMapRnaV5,321 transMapRnaV5,550 transMapV5,257 transMapV5,325 transMapV5,425 transMapV5,427 transMapV5,656 uniprot,183 uniprot,258 uniprot,280 uniprot,458 uniprot,639 uniprot,716 uniprot,788 uniprot,946 uniprot,1475 uniprot,1481 uniprot,1496 uniprot,1501 uniprot,1718 uniprot,1948 windowmaskerSdust,54 xenoRefGene,227 xenoRefGene,271 within gold,163 mrna,83 mrna,380 simpleRepeat,37 transMapEnsemblV5,652 transMapEstV5,621 transMapRefSeqV5,621 transMapRnaV5,621 transMapV5,727 uniprot,1109 uniprot,1313 uniprot,1345 uniprot,1488 uniprot,1806 xenoMrna,157 xenoMrna,454 xenoRefGene,82 xenoRefGene,260 without uniprot,139 wj chainDanRer7,1041 chainDanRer7,1083 chainFr3,1041 chainFr3,1083 chainGalGal6,1041 chainGalGal6,1083 chainGasAcu1,1041 chainGasAcu1,1083 chainHg19,1041 chainHg19,1083 chainMm10,1041 chainMm10,1083 chainNetDanRer7,1044 chainNetDanRer7,1086 chainNetFr3,1044 chainNetFr3,1086 chainNetGalGal6,1044 chainNetGalGal6,1086 chainNetGasAcu1,1044 chainNetGasAcu1,1086 chainNetHg19,1044 chainNetHg19,1086 chainNetMm10,1044 chainNetMm10,1086 chainNetOryLat2,1050 chainNetOryLat2,1092 chainOryLat2,1047 chainOryLat2,1089 mrna,448 netDanRer7,1041 netDanRer7,1083 netFr3,1041 netFr3,1083 netGalGal6,1041 netGalGal6,1083 netGasAcu1,1041 netGasAcu1,1083 netHg19,1041 netHg19,1083 netMm10,1041 netMm10,1083 netOryLat2,1047 netOryLat2,1089 xenoMrna,517 xenoRefGene,301 wm windowmaskerSdust,1 wm_counts windowmaskerSdust,64 windowmaskerSdust,67 words uniprot,1201 worldwide mrna,419 transMapEnsemblV5,698 transMapEstV5,667 transMapRefSeqV5,667 transMapRnaV5,667 transMapV5,773 xenoMrna,488 xenoRefGene,291 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 ensGene,147 written blastHg18KG,179 blastHg18KG,192 gaze,23 genscan,19 microsat,109 simpleRepeat,69 www.repeatmasker.org nestedRepeats,333 x uniprot,1923 xml uniprot,1510 y ensGene,177 yap chainDanRer7,1024 chainFr3,1024 chainGalGal6,1024 chainGasAcu1,1024 chainHg19,1024 chainMm10,1024 chainNetDanRer7,1027 chainNetFr3,1027 chainNetGalGal6,1027 chainNetGasAcu1,1027 chainNetHg19,1027 chainNetMm10,1027 chainNetOryLat2,1033 chainOryLat2,1030 netDanRer7,1024 netFr3,1024 netGalGal6,1024 netGasAcu1,1024 netHg19,1024 netMm10,1024 netOryLat2,1030 years uniprot,933 yip uniprot,2010 yl uniprot,2011 you mrna,178 uniprot,655 uniprot,689 uniprot,1443 xenoMrna,252 xenoRefGene,204 younger nestedRepeats,94 your transMapEnsemblV5,629 transMapEstV5,598 transMapRefSeqV5,598 transMapRnaV5,598 transMapV5,704 uniprot,1783 z chainDanRer7,1087 chainFr3,1087 chainGalGal6,1087 chainGasAcu1,1087 chainHg19,1087 chainMm10,1087 chainNetDanRer7,1090 chainNetFr3,1090 chainNetGalGal6,1090 chainNetGasAcu1,1090 chainNetHg19,1090 chainNetMm10,1090 chainNetOryLat2,1096 chainOryLat2,1093 netDanRer7,1087 netFr3,1087 netGalGal6,1087 netGasAcu1,1087 netHg19,1087 netMm10,1087 netOryLat2,1093 zebrafish augustusGene,202 augustusGene,278 chainDanRer7,1 chainDanRer7,3 chainDanRer7,65 chainDanRer7,96 chainDanRer7,148 chainDanRer7,266 chainDanRer7,291 chainDanRer7,572 chainDanRer7,620 chainNetDanRer7,1 chainNetDanRer7,4 chainNetDanRer7,68 chainNetDanRer7,99 chainNetDanRer7,151 chainNetDanRer7,269 chainNetDanRer7,294 chainNetDanRer7,575 chainNetDanRer7,623 chainNetDanRer7Viewchain,2 chainNetDanRer7Viewnet,2 netDanRer7,1 netDanRer7,3 netDanRer7,65 netDanRer7,96 netDanRer7,148 netDanRer7,266 netDanRer7,291 netDanRer7,572 netDanRer7,620 zhang chainDanRer7,925 chainDanRer7,1086 chainFr3,925 chainFr3,1086 chainGalGal6,925 chainGalGal6,1086 chainGasAcu1,925 chainGasAcu1,1086 chainHg19,925 chainHg19,1086 chainMm10,925 chainMm10,1086 chainNetDanRer7,928 chainNetDanRer7,1089 chainNetFr3,928 chainNetFr3,1089 chainNetGalGal6,928 chainNetGalGal6,1089 chainNetGasAcu1,928 chainNetGasAcu1,1089 chainNetHg19,928 chainNetHg19,1089 chainNetMm10,928 chainNetMm10,1089 chainNetOryLat2,934 chainNetOryLat2,1095 chainOryLat2,931 chainOryLat2,1092 netDanRer7,925 netDanRer7,1086 netFr3,925 netFr3,1086 netGalGal6,925 netGalGal6,1086 netGasAcu1,925 netGasAcu1,1086 netHg19,925 netHg19,1086 netMm10,925 netMm10,1086 netOryLat2,931 netOryLat2,1092 zheng chainDanRer7,924 chainFr3,924 chainGalGal6,924 chainGasAcu1,924 chainHg19,924 chainMm10,924 chainNetDanRer7,927 chainNetFr3,927 chainNetGalGal6,927 chainNetGasAcu1,927 chainNetHg19,927 chainNetMm10,927 chainNetOryLat2,933 chainOryLat2,930 netDanRer7,924 netFr3,924 netGalGal6,924 netGasAcu1,924 netHg19,924 netMm10,924 netOryLat2,930 zhu transMapEnsemblV5,784 transMapEstV5,753 transMapRefSeqV5,753 transMapRnaV5,753 transMapV5,859 zinc uniprot,326 zone tRNAs,208 zoomed-in genscan,103 zv9 chainDanRer7,6 chainDanRer7,68 chainDanRer7,302 chainNetDanRer7,7 chainNetDanRer7,71 chainNetDanRer7,305 chainNetDanRer7Viewchain,5 chainNetDanRer7Viewnet,5 netDanRer7,6 netDanRer7,68 netDanRer7,302