0 nestedRepeats,237 transMapEnsemblV5,675 transMapEstV5,644 transMapRefSeqV5,644 transMapRnaV5,644 transMapV5,750 uniprot,1822 0.01 cpgIslandExt,473 cpgIslandExtUnmasked,476 cpgIslandSuper,473 0.0f cpgIslandExt,449 cpgIslandExtUnmasked,452 cpgIslandSuper,449 0.1 refSeqComposite,1279 0.1f cpgIslandExt,451 cpgIslandExtUnmasked,454 cpgIslandSuper,451 0.2 augustusGene,136 0.5 augustusGene,138 transMapEnsemblV5,228 transMapEnsemblV5,364 transMapEstV5,197 transMapEstV5,333 transMapRefSeqV5,197 transMapRefSeqV5,333 transMapRnaV5,197 transMapRnaV5,333 transMapV5,303 transMapV5,439 xenoRefGene,267 0.6 cpgIslandExt,276 cpgIslandExtUnmasked,279 cpgIslandSuper,276 000 transMapV5,111 1 augustusGene,310 chainHg38,397 chainHg38,528 chainHg38,722 chainHg38,1121 chainNetHg38,400 chainNetHg38,531 chainNetHg38,725 chainNetHg38,1124 chainNetTarSyr2,400 chainNetTarSyr2,531 chainNetTarSyr2,725 chainNetTarSyr2,1124 chainTarSyr2,397 chainTarSyr2,528 chainTarSyr2,722 chainTarSyr2,1121 cpgIslandExt,245 cpgIslandExt,429 cpgIslandExt,458 cpgIslandExt,485 cpgIslandExtUnmasked,248 cpgIslandExtUnmasked,432 cpgIslandExtUnmasked,461 cpgIslandExtUnmasked,488 cpgIslandSuper,245 cpgIslandSuper,429 cpgIslandSuper,458 cpgIslandSuper,485 ensGene,200 ensGene,202 genscan,227 netHg38,397 netHg38,528 netHg38,722 netHg38,1121 netTarSyr2,397 netTarSyr2,528 netTarSyr2,722 netTarSyr2,1121 refSeqComposite,1822 transMapEnsemblV5,784 transMapEstV5,753 transMapRefSeqV5,753 transMapRnaV5,753 transMapV5,859 uniprot,1110 uniprot,1314 uniprot,1346 uniprot,1490 uniprot,1927 xenoRefGene,390 1.0 transMapEnsemblV5,372 transMapEstV5,341 transMapRefSeqV5,341 transMapRnaV5,341 transMapV5,447 10 gap,137 uniprot,1928 100 augustusGene,134 chainHg38,1089 chainNetHg38,1092 chainNetTarSyr2,1092 chainTarSyr2,1089 microsat,70 nestedRepeats,230 netHg38,1089 netTarSyr2,1089 100.0 cpgIslandExt,474 cpgIslandExtUnmasked,477 cpgIslandSuper,474 1000 chainHg38,761 chainNetHg38,764 chainNetTarSyr2,764 chainTarSyr2,761 nestedRepeats,238 netHg38,761 netTarSyr2,761 1000-2000 augustusGene,161 1000000 transMapEnsemblV5,677 transMapEstV5,646 transMapRefSeqV5,646 transMapRnaV5,646 transMapV5,752 uniprot,1824 103-7 chainHg38,1122 chainNetHg38,1125 chainNetTarSyr2,1125 chainTarSyr2,1122 netHg38,1122 netTarSyr2,1122 10607616 nestedRepeats,394 rmsk,417 10973072 nestedRepeats,361 rmsk,384 11 chainHg38,718 chainHg38,725 chainNetHg38,721 chainNetHg38,728 chainNetTarSyr2,721 chainNetTarSyr2,728 chainTarSyr2,718 chainTarSyr2,725 netHg38,718 netHg38,725 netTarSyr2,718 netTarSyr2,725 111 chainHg38,720 chainHg38,726 chainNetHg38,723 chainNetHg38,729 chainNetTarSyr2,723 chainNetTarSyr2,729 chainTarSyr2,720 chainTarSyr2,726 netHg38,720 netHg38,726 netTarSyr2,720 netTarSyr2,726 11484-9 chainHg38,1091 chainNetHg38,1094 chainNetTarSyr2,1094 chainTarSyr2,1091 netHg38,1091 netTarSyr2,1091 115-26 chainHg38,1053 chainNetHg38,1056 chainNetTarSyr2,1056 chainTarSyr2,1053 netHg38,1053 netTarSyr2,1053 11752248 ensGene,205 117900 chainHg38,742 chainHg38,754 chainNetHg38,745 chainNetHg38,757 chainNetTarSyr2,745 chainNetTarSyr2,757 chainTarSyr2,742 chainTarSyr2,754 netHg38,742 netHg38,754 netTarSyr2,742 netTarSyr2,754 118300 chainHg38,766 chainNetHg38,769 chainNetTarSyr2,769 chainTarSyr2,766 netHg38,766 netTarSyr2,766 11928468 chainHg38,1055 chainNetHg38,1058 chainNetTarSyr2,1058 chainTarSyr2,1055 netHg38,1055 netTarSyr2,1055 11932250 refSeqComposite,1752 xenoRefGene,320 12 refSeqComposite,1748 transMapEnsemblV5,754 transMapEnsemblV5,820 transMapEstV5,723 transMapEstV5,789 transMapRefSeqV5,723 transMapRefSeqV5,789 transMapRnaV5,723 transMapRnaV5,789 transMapV5,829 transMapV5,895 xenoRefGene,316 12111 chainHg38,728 chainNetHg38,731 chainNetTarSyr2,731 chainTarSyr2,728 netHg38,728 netTarSyr2,728 12529312 chainHg38,1124 chainNetHg38,1127 chainNetTarSyr2,1127 chainTarSyr2,1124 netHg38,1124 netTarSyr2,1124 127-163 genscan,206 13 chainHg38,1120 chainNetHg38,1123 chainNetTarSyr2,1123 chainTarSyr2,1120 netHg38,1120 netTarSyr2,1120 1300 chainHg38,762 chainNetHg38,765 chainNetTarSyr2,765 chainTarSyr2,762 netHg38,762 netTarSyr2,762 134-41 windowmaskerSdust,112 14500911 chainHg38,1093 chainNetHg38,1096 chainNetTarSyr2,1096 chainTarSyr2,1093 netHg38,1093 netTarSyr2,1093 14534192 augustusGene,340 15 microsat,30 microsat,79 microsat,130 refSeqComposite,1251 simpleRepeat,90 windowmaskerSdust,109 xenoRefGene,239 15108278 uniprot,2051 152111 chainHg38,731 chainNetHg38,734 chainNetTarSyr2,734 chainTarSyr2,731 netHg38,731 netTarSyr2,731 15608248 refSeqComposite,1828 xenoRefGene,396 16 nestedRepeats,357 rmsk,380 16287941 windowmaskerSdust,114 17 cpgIslandExt,241 cpgIslandExtUnmasked,244 cpgIslandSuper,241 transMapEnsemblV5,753 transMapEstV5,722 transMapRefSeqV5,722 transMapRnaV5,722 transMapV5,828 1763-73 transMapEnsemblV5,755 transMapEstV5,724 transMapRefSeqV5,724 transMapRnaV5,724 transMapV5,830 17989246 transMapEnsemblV5,757 transMapEstV5,726 transMapRefSeqV5,726 transMapRnaV5,726 transMapV5,832 18 gap,138 18085818 transMapEnsemblV5,823 transMapEstV5,792 transMapRefSeqV5,792 transMapRnaV5,792 transMapV5,898 18218656 augustusGene,315 transMapEnsemblV5,789 transMapEstV5,758 transMapRefSeqV5,758 transMapRnaV5,758 transMapV5,864 19 augustusGene,335 196 cpgIslandExt,619 cpgIslandExtUnmasked,622 cpgIslandSuper,619 gold,154 1987 cpgIslandExt,379 cpgIslandExt,616 cpgIslandExtUnmasked,382 cpgIslandExtUnmasked,619 cpgIslandSuper,379 cpgIslandSuper,616 1996 nestedRepeats,410 rmsk,433 1996-2010 nestedRepeats,334 rmsk,357 1997 genscan,149 genscan,223 1998 genscan,167 genscan,204 1999 microsat,103 microsat,128 nestedRepeats,388 rmsk,411 simpleRepeat,65 simpleRepeat,88 2 augustusGene,142 augustusGene,337 chainHg38,431 chainHg38,436 chainHg38,723 chainNetHg38,434 chainNetHg38,439 chainNetHg38,726 chainNetTarSyr2,434 chainNetTarSyr2,439 chainNetTarSyr2,726 chainTarSyr2,431 chainTarSyr2,436 chainTarSyr2,723 cpgIslandExt,421 cpgIslandExt,426 cpgIslandExt,428 cpgIslandExt,434 cpgIslandExt,460 cpgIslandExt,475 cpgIslandExt,620 cpgIslandExtUnmasked,424 cpgIslandExtUnmasked,429 cpgIslandExtUnmasked,431 cpgIslandExtUnmasked,437 cpgIslandExtUnmasked,463 cpgIslandExtUnmasked,478 cpgIslandExtUnmasked,623 cpgIslandSuper,421 cpgIslandSuper,426 cpgIslandSuper,428 cpgIslandSuper,434 cpgIslandSuper,460 cpgIslandSuper,475 cpgIslandSuper,620 microsat,66 microsat,132 netHg38,431 netHg38,436 netHg38,723 netTarSyr2,431 netTarSyr2,436 netTarSyr2,723 simpleRepeat,92 uniprot,1121 uniprot,1331 windowmaskerSdust,111 2-3 uniprot,1572 20 chainHg38,1090 chainNetHg38,1093 chainNetTarSyr2,1093 chainTarSyr2,1090 cpgIslandExt,618 cpgIslandExtUnmasked,621 cpgIslandSuper,618 netHg38,1090 netTarSyr2,1090 transMapEnsemblV5,380 transMapEstV5,349 transMapRefSeqV5,349 transMapRnaV5,349 transMapV5,455 200 cpgIslandExt,271 cpgIslandExtUnmasked,274 cpgIslandSuper,271 2000 nestedRepeats,63 nestedRepeats,355 rmsk,99 rmsk,378 2002 chainHg38,1052 chainNetHg38,1055 chainNetTarSyr2,1055 chainTarSyr2,1052 ensGene,47 ensGene,198 netHg38,1052 netTarSyr2,1052 refSeqComposite,1746 xenoRefGene,314 2003 augustusGene,333 chainHg38,1086 chainHg38,1118 chainNetHg38,1089 chainNetHg38,1121 chainNetTarSyr2,1089 chainNetTarSyr2,1121 chainTarSyr2,1086 chainTarSyr2,1118 netHg38,1086 netHg38,1118 netTarSyr2,1086 netTarSyr2,1118 2004 uniprot,2045 2005 refSeqComposite,1820 xenoRefGene,388 2006 windowmaskerSdust,107 2007 chainHg38,1025 chainNetHg38,1028 chainNetTarSyr2,1028 chainTarSyr2,1025 netHg38,1025 netTarSyr2,1025 transMapEnsemblV5,751 transMapEnsemblV5,817 transMapEstV5,720 transMapEstV5,786 transMapRefSeqV5,720 transMapRefSeqV5,786 transMapRnaV5,720 transMapRnaV5,786 transMapV5,826 transMapV5,892 2008 augustusGene,308 transMapEnsemblV5,782 transMapEstV5,751 transMapRefSeqV5,751 transMapRnaV5,751 transMapV5,857 2012 uniprot,2000 2013 chainHg38,5 chainHg38,67 chainHg38,313 chainNetHg38,6 chainNetHg38,70 chainNetHg38,316 chainNetHg38Viewchain,4 chainNetHg38Viewnet,4 chainNetTarSyr2,6 chainNetTarSyr2,70 chainNetTarSyr2,316 chainNetTarSyr2Viewchain,4 chainNetTarSyr2Viewnet,4 chainTarSyr2,5 chainTarSyr2,67 chainTarSyr2,313 netHg38,5 netHg38,67 netHg38,313 netTarSyr2,5 netTarSyr2,67 netTarSyr2,313 2014 gap,16 gold,18 refSeqComposite,1787 xenoRefGene,355 2022_03 uniprot,1911 2023 uniprot,1191 2111 chainHg38,727 chainNetHg38,730 chainNetTarSyr2,730 chainTarSyr2,727 netHg38,727 netTarSyr2,727 217900 chainHg38,743 chainHg38,755 chainNetHg38,746 chainNetHg38,758 chainNetTarSyr2,746 chainNetTarSyr2,758 chainTarSyr2,743 chainTarSyr2,755 netHg38,743 netHg38,755 netTarSyr2,743 netTarSyr2,755 218300 chainHg38,767 chainNetHg38,770 chainNetTarSyr2,770 chainTarSyr2,767 netHg38,767 netTarSyr2,767 22 windowmaskerSdust,110 22102590 uniprot,2007 225 transMapEnsemblV5,722 transMapEstV5,691 transMapRefSeqV5,691 transMapRnaV5,691 transMapV5,797 22900 chainHg38,740 chainHg38,752 chainNetHg38,743 chainNetHg38,755 chainNetTarSyr2,743 chainNetTarSyr2,755 chainTarSyr2,740 chainTarSyr2,752 netHg38,740 netHg38,752 netTarSyr2,740 netTarSyr2,752 23 uniprot,2047 23300 chainHg38,764 chainNetHg38,767 chainNetTarSyr2,767 chainTarSyr2,764 netHg38,764 netTarSyr2,764 24 augustusGene,311 transMapEnsemblV5,785 transMapEstV5,754 transMapRefSeqV5,754 transMapRnaV5,754 transMapV5,860 24259432 refSeqComposite,1794 xenoRefGene,362 25 genscan,225 transMapV5,114 xenoRefGene,274 252111 chainHg38,732 chainNetHg38,735 chainNetTarSyr2,735 chainTarSyr2,732 netHg38,732 netTarSyr2,732 261-82 cpgIslandExt,621 cpgIslandExtUnmasked,624 cpgIslandSuper,621 268 genscan,226 27 microsat,131 simpleRepeat,91 285 gap,134 2900 chainHg38,739 chainHg38,751 chainNetHg38,742 chainNetHg38,754 chainNetTarSyr2,742 chainNetTarSyr2,754 chainTarSyr2,739 chainTarSyr2,751 netHg38,739 netHg38,751 netTarSyr2,739 netTarSyr2,751 2n cpgIslandExt,487 cpgIslandExtUnmasked,490 cpgIslandSuper,487 3 augustusGene,140 chainHg38,443 chainHg38,724 chainNetHg38,446 chainNetHg38,727 chainNetTarSyr2,446 chainNetTarSyr2,727 chainTarSyr2,443 chainTarSyr2,724 cpgIslandExt,432 cpgIslandExt,462 cpgIslandExtUnmasked,435 cpgIslandExtUnmasked,465 cpgIslandSuper,432 cpgIslandSuper,462 microsat,68 netHg38,443 netHg38,724 netTarSyr2,443 netTarSyr2,724 transMapEnsemblV5,819 transMapEstV5,788 transMapRefSeqV5,788 transMapRnaV5,788 transMapV5,894 uniprot,1123 uniprot,1194 3.1 augustusGene,24 30 chainHg38,1088 chainNetHg38,1091 chainNetTarSyr2,1091 chainTarSyr2,1088 ensGene,201 netHg38,1088 netTarSyr2,1088 300 cpgIslandExt,6 cpgIslandExtUnmasked,9 cpgIslandSuper,6 3000 chainHg38,696 chainNetHg38,699 chainNetTarSyr2,699 chainTarSyr2,696 netHg38,696 netTarSyr2,696 317900 chainHg38,744 chainHg38,756 chainNetHg38,747 chainNetHg38,759 chainNetTarSyr2,747 chainNetTarSyr2,759 chainTarSyr2,744 chainTarSyr2,756 netHg38,744 netHg38,756 netTarSyr2,744 netTarSyr2,756 318300 chainHg38,768 chainNetHg38,771 chainNetTarSyr2,771 chainTarSyr2,768 netHg38,768 netTarSyr2,768 32111 chainHg38,729 chainNetHg38,732 chainNetTarSyr2,732 chainTarSyr2,729 netHg38,729 netTarSyr2,729 33 refSeqComposite,1823 xenoRefGene,391 3300 chainHg38,763 chainNetHg38,766 chainNetTarSyr2,766 chainTarSyr2,763 netHg38,763 netTarSyr2,763 34990190 refSeqComposite,1565 350 chainHg38,734 chainHg38,746 chainNetHg38,737 chainNetHg38,749 chainNetTarSyr2,737 chainNetTarSyr2,749 chainTarSyr2,734 chainTarSyr2,746 netHg38,734 netHg38,746 netTarSyr2,734 netTarSyr2,746 3656447 cpgIslandExt,623 cpgIslandExtUnmasked,626 cpgIslandSuper,623 36727467 refSeqComposite,1567 38-41 ensGene,203 39s ensGene,163 4 refSeqComposite,1749 xenoRefGene,317 40 uniprot,2002 400 transMapV5,110 418-420 nestedRepeats,359 rmsk,382 42 refSeqComposite,1789 xenoRefGene,357 425 chainHg38,735 chainHg38,747 chainNetHg38,738 chainNetHg38,750 chainNetTarSyr2,738 chainNetTarSyr2,750 chainTarSyr2,735 chainTarSyr2,747 netHg38,735 netHg38,747 netTarSyr2,735 netTarSyr2,747 45 refSeqComposite,949 450 chainHg38,736 chainHg38,748 chainNetHg38,739 chainNetHg38,751 chainNetTarSyr2,739 chainNetTarSyr2,751 chainTarSyr2,736 chainTarSyr2,748 netHg38,736 netHg38,748 netTarSyr2,736 netTarSyr2,748 464-70 uniprot,2049 5 augustusGene,312 cpgIslandExt,464 cpgIslandExtUnmasked,467 cpgIslandSuper,464 transMapEnsemblV5,9 transMapEnsemblV5,786 transMapEstV5,7 transMapEstV5,755 transMapRefSeqV5,8 transMapRefSeqV5,755 transMapRnaV5,8 transMapRnaV5,755 transMapV5,6 transMapV5,861 uniprot,2048 5-base gc5BaseBw,6 gc5BaseBw,27 50 cpgIslandExt,265 cpgIslandExtUnmasked,268 cpgIslandSuper,265 nestedRepeats,229 573-80 microsat,133 simpleRepeat,93 57900 chainHg38,741 chainHg38,753 chainNetHg38,744 chainNetHg38,756 chainNetTarSyr2,744 chainNetTarSyr2,756 chainTarSyr2,741 chainTarSyr2,753 netHg38,741 netHg38,753 netTarSyr2,741 netTarSyr2,753 58300 chainHg38,765 chainNetHg38,768 chainNetTarSyr2,768 chainTarSyr2,765 netHg38,765 netTarSyr2,765 6 cpgIslandExt,466 cpgIslandExt,469 cpgIslandExt,477 cpgIslandExtUnmasked,469 cpgIslandExtUnmasked,472 cpgIslandExtUnmasked,480 cpgIslandSuper,466 cpgIslandSuper,469 cpgIslandSuper,477 nestedRepeats,391 nestedRepeats,412 nestedRepeats,413 rmsk,414 rmsk,435 rmsk,436 600 chainHg38,737 chainHg38,749 chainNetHg38,740 chainNetHg38,752 chainNetTarSyr2,740 chainNetTarSyr2,752 chainTarSyr2,737 chainTarSyr2,749 netHg38,737 netHg38,749 netTarSyr2,737 netTarSyr2,749 61 gap,133 637-44 augustusGene,313 transMapEnsemblV5,787 transMapEstV5,756 transMapRefSeqV5,756 transMapRnaV5,756 transMapV5,862 656-64 refSeqComposite,1750 xenoRefGene,318 657-63 nestedRepeats,392 rmsk,415 7 cpgIslandExt,472 cpgIslandExt,480 cpgIslandExtUnmasked,475 cpgIslandExtUnmasked,483 cpgIslandSuper,472 cpgIslandSuper,480 72111 chainHg38,730 chainNetHg38,733 chainNetTarSyr2,733 chainTarSyr2,730 netHg38,730 netTarSyr2,730 743-8 nestedRepeats,414 rmsk,437 750 chainHg38,758 chainNetHg38,761 chainNetTarSyr2,761 chainTarSyr2,758 netHg38,758 netTarSyr2,758 78-94 genscan,228 796 gold,155 825 chainHg38,759 chainNetHg38,762 chainNetTarSyr2,762 chainTarSyr2,759 netHg38,759 netTarSyr2,759 850 chainHg38,760 chainNetHg38,763 chainNetTarSyr2,763 chainTarSyr2,760 netHg38,760 netTarSyr2,760 8994846 nestedRepeats,416 rmsk,439 9 cpgIslandExt,482 cpgIslandExtUnmasked,485 cpgIslandSuper,482 nestedRepeats,358 nestedRepeats,390 rmsk,381 rmsk,413 900 chainHg38,738 chainHg38,750 chainNetHg38,741 chainNetHg38,753 chainNetTarSyr2,741 chainNetTarSyr2,753 chainTarSyr2,738 chainTarSyr2,750 netHg38,738 netHg38,750 netTarSyr2,738 netTarSyr2,750 9149143 genscan,230 920 gap,139 93 uniprot,1483 96 refSeqComposite,1286 9862982 microsat,135 simpleRepeat,95 _alt uniprot,1419 _fix uniprot,1421 a augustusGene,116 augustusGene,128 augustusGene,152 augustusGene,215 augustusGene,218 augustusGene,233 augustusGene,323 augustusGene,328 chainHg38,77 chainHg38,148 chainHg38,202 chainHg38,463 chainHg38,473 chainHg38,477 chainHg38,544 chainHg38,561 chainHg38,564 chainHg38,632 chainHg38,637 chainHg38,644 chainHg38,648 chainHg38,659 chainHg38,691 chainHg38,810 chainHg38,824 chainHg38,830 chainHg38,836 chainHg38,840 chainHg38,843 chainHg38,871 chainHg38,1061 chainHg38,1085 chainHg38,1101 chainNetHg38,80 chainNetHg38,151 chainNetHg38,205 chainNetHg38,466 chainNetHg38,476 chainNetHg38,480 chainNetHg38,547 chainNetHg38,564 chainNetHg38,567 chainNetHg38,635 chainNetHg38,640 chainNetHg38,647 chainNetHg38,651 chainNetHg38,662 chainNetHg38,694 chainNetHg38,813 chainNetHg38,827 chainNetHg38,833 chainNetHg38,839 chainNetHg38,843 chainNetHg38,846 chainNetHg38,874 chainNetHg38,1064 chainNetHg38,1088 chainNetHg38,1104 chainNetTarSyr2,80 chainNetTarSyr2,151 chainNetTarSyr2,205 chainNetTarSyr2,466 chainNetTarSyr2,476 chainNetTarSyr2,480 chainNetTarSyr2,547 chainNetTarSyr2,564 chainNetTarSyr2,567 chainNetTarSyr2,635 chainNetTarSyr2,640 chainNetTarSyr2,647 chainNetTarSyr2,651 chainNetTarSyr2,662 chainNetTarSyr2,694 chainNetTarSyr2,813 chainNetTarSyr2,827 chainNetTarSyr2,833 chainNetTarSyr2,839 chainNetTarSyr2,843 chainNetTarSyr2,846 chainNetTarSyr2,874 chainNetTarSyr2,1064 chainNetTarSyr2,1088 chainNetTarSyr2,1104 chainTarSyr2,77 chainTarSyr2,148 chainTarSyr2,202 chainTarSyr2,463 chainTarSyr2,473 chainTarSyr2,477 chainTarSyr2,544 chainTarSyr2,561 chainTarSyr2,564 chainTarSyr2,632 chainTarSyr2,637 chainTarSyr2,644 chainTarSyr2,648 chainTarSyr2,659 chainTarSyr2,691 chainTarSyr2,810 chainTarSyr2,824 chainTarSyr2,830 chainTarSyr2,836 chainTarSyr2,840 chainTarSyr2,843 chainTarSyr2,871 chainTarSyr2,1061 chainTarSyr2,1085 chainTarSyr2,1101 cpgIslandExt,43 cpgIslandExt,50 cpgIslandExt,54 cpgIslandExt,128 cpgIslandExt,166 cpgIslandExt,236 cpgIslandExt,590 cpgIslandExt,593 cpgIslandExtUnmasked,46 cpgIslandExtUnmasked,53 cpgIslandExtUnmasked,57 cpgIslandExtUnmasked,131 cpgIslandExtUnmasked,169 cpgIslandExtUnmasked,239 cpgIslandExtUnmasked,593 cpgIslandExtUnmasked,596 cpgIslandSuper,43 cpgIslandSuper,50 cpgIslandSuper,54 cpgIslandSuper,128 cpgIslandSuper,166 cpgIslandSuper,236 cpgIslandSuper,590 cpgIslandSuper,593 ensGene,31 gap,101 gap,105 gc5BaseBw,44 genscan,102 genscan,132 gold,119 gold,125 microsat,53 microsat,119 nestedRepeats,177 nestedRepeats,226 nestedRepeats,344 nestedRepeats,363 netHg38,77 netHg38,148 netHg38,202 netHg38,463 netHg38,473 netHg38,477 netHg38,544 netHg38,561 netHg38,564 netHg38,632 netHg38,637 netHg38,644 netHg38,648 netHg38,659 netHg38,691 netHg38,810 netHg38,824 netHg38,830 netHg38,836 netHg38,840 netHg38,843 netHg38,871 netHg38,1061 netHg38,1085 netHg38,1101 netTarSyr2,77 netTarSyr2,148 netTarSyr2,202 netTarSyr2,463 netTarSyr2,473 netTarSyr2,477 netTarSyr2,544 netTarSyr2,561 netTarSyr2,564 netTarSyr2,632 netTarSyr2,637 netTarSyr2,644 netTarSyr2,648 netTarSyr2,659 netTarSyr2,691 netTarSyr2,810 netTarSyr2,824 netTarSyr2,830 netTarSyr2,836 netTarSyr2,840 netTarSyr2,843 netTarSyr2,871 netTarSyr2,1061 netTarSyr2,1085 netTarSyr2,1101 refSeqComposite,149 refSeqComposite,160 refSeqComposite,297 refSeqComposite,312 refSeqComposite,537 refSeqComposite,650 refSeqComposite,798 refSeqComposite,1060 refSeqComposite,1255 refSeqComposite,1274 refSeqComposite,1527 refSeqComposite,1546 refSeqComposite,1572 refSeqComposite,1661 refSeqComposite,1764 refSeqComposite,1807 rmsk,36 rmsk,56 rmsk,226 rmsk,240 rmsk,367 rmsk,386 simpleRepeat,79 transMapEnsemblV5,83 transMapEnsemblV5,117 transMapEnsemblV5,209 transMapEnsemblV5,322 transMapEnsemblV5,359 transMapEnsemblV5,403 transMapEnsemblV5,429 transMapEnsemblV5,482 transMapEnsemblV5,552 transMapEnsemblV5,631 transMapEnsemblV5,659 transMapEnsemblV5,718 transMapEstV5,52 transMapEstV5,86 transMapEstV5,178 transMapEstV5,291 transMapEstV5,328 transMapEstV5,372 transMapEstV5,398 transMapEstV5,451 transMapEstV5,521 transMapEstV5,600 transMapEstV5,628 transMapEstV5,687 transMapRefSeqV5,52 transMapRefSeqV5,86 transMapRefSeqV5,178 transMapRefSeqV5,291 transMapRefSeqV5,328 transMapRefSeqV5,372 transMapRefSeqV5,398 transMapRefSeqV5,451 transMapRefSeqV5,521 transMapRefSeqV5,600 transMapRefSeqV5,628 transMapRefSeqV5,687 transMapRnaV5,52 transMapRnaV5,86 transMapRnaV5,178 transMapRnaV5,291 transMapRnaV5,328 transMapRnaV5,372 transMapRnaV5,398 transMapRnaV5,451 transMapRnaV5,521 transMapRnaV5,600 transMapRnaV5,628 transMapRnaV5,687 transMapV5,53 transMapV5,192 transMapV5,284 transMapV5,397 transMapV5,434 transMapV5,478 transMapV5,504 transMapV5,557 transMapV5,627 transMapV5,706 transMapV5,734 transMapV5,793 uniprot,140 uniprot,311 uniprot,418 uniprot,459 uniprot,480 uniprot,490 uniprot,523 uniprot,603 uniprot,622 uniprot,708 uniprot,740 uniprot,759 uniprot,805 uniprot,965 uniprot,976 uniprot,988 uniprot,1001 uniprot,1048 uniprot,1071 uniprot,1152 uniprot,1164 uniprot,1179 uniprot,1217 uniprot,1226 uniprot,1234 uniprot,1239 uniprot,1286 uniprot,1458 uniprot,1599 uniprot,1634 uniprot,1735 uniprot,1779 uniprot,1807 uniprot,1922 uniprot,1949 uniprot,2017 uniprot,2023 uniprot,2032 windowmaskerSdust,91 xenoRefGene,243 xenoRefGene,262 xenoRefGene,332 xenoRefGene,375 a100-172-29-118 chainNetTarSyr2,687 chainTarSyr2,684 netTarSyr2,684 a91-114-31-123 chainHg38,684 chainNetHg38,687 netHg38,684 aa unipModif,1 windowmaskerSdust,97 ab augustusGene,3 augustusGene,16 abbreviated chainHg38,595 chainNetHg38,598 chainNetTarSyr2,598 chainTarSyr2,595 netHg38,595 netTarSyr2,595 about chainHg38,469 chainHg38,482 chainHg38,860 chainNetHg38,472 chainNetHg38,485 chainNetHg38,863 chainNetTarSyr2,472 chainNetTarSyr2,485 chainNetTarSyr2,863 chainTarSyr2,469 chainTarSyr2,482 chainTarSyr2,860 gap,37 genscan,127 gold,39 microsat,98 netHg38,469 netHg38,482 netHg38,860 netTarSyr2,469 netTarSyr2,482 netTarSyr2,860 refSeqComposite,97 refSeqComposite,858 refSeqComposite,1193 refSeqComposite,1390 refSeqComposite,1469 simpleRepeat,59 transMapEnsemblV5,134 transMapEstV5,103 transMapRefSeqV5,103 transMapRnaV5,103 transMapV5,209 xenoRefGene,180 above chainHg38,541 chainHg38,553 chainHg38,573 chainNetHg38,544 chainNetHg38,556 chainNetHg38,576 chainNetTarSyr2,544 chainNetTarSyr2,556 chainNetTarSyr2,576 chainTarSyr2,541 chainTarSyr2,553 chainTarSyr2,573 nestedRepeats,218 netHg38,541 netHg38,553 netHg38,573 netTarSyr2,541 netTarSyr2,553 netTarSyr2,573 uniprot,1525 abundance chainHg38,184 chainNetHg38,187 chainNetTarSyr2,187 chainTarSyr2,184 netHg38,184 netTarSyr2,184 acad chainHg38,1081 chainNetHg38,1084 chainNetTarSyr2,1084 chainTarSyr2,1081 netHg38,1081 netTarSyr2,1081 acc ucscToRefSeq,2 acceptor genscan,32 access cpgIslandExt,505 cpgIslandExtUnmasked,508 cpgIslandSuper,505 ensGene,56 ensGene,100 refSeqComposite,1296 refSeqComposite,1360 refSeqComposite,1450 refSeqComposite,1659 transMapEnsemblV5,522 transMapEnsemblV5,581 transMapEstV5,491 transMapEstV5,550 transMapRefSeqV5,491 transMapRefSeqV5,550 transMapRnaV5,491 transMapRnaV5,550 transMapV5,597 transMapV5,656 uniprot,896 uniprot,1706 uniprot,1838 accessed refSeqComposite,1305 refSeqComposite,1328 transMapEnsemblV5,531 transMapEstV5,500 transMapRefSeqV5,500 transMapRnaV5,500 transMapV5,606 accesses refSeqComposite,1633 accessing refSeqComposite,1391 transMapEnsemblV5,574 transMapEstV5,543 transMapRefSeqV5,543 transMapRnaV5,543 transMapV5,649 accession refSeqComposite,785 refSeqComposite,810 ucscToINSDC,2 ucscToINSDC,23 ucscToRefSeq,4 ucscToRefSeq,18 xenoRefGene,120 xenoRefGene,132 accession.version-srcuniq.destuniq transMapEnsemblV5,425 transMapEstV5,394 transMapRefSeqV5,394 transMapRnaV5,394 transMapV5,500 accessions refSeqComposite,223 refSeqComposite,352 refSeqComposite,498 transMapEnsemblV5,397 transMapEstV5,366 transMapRefSeqV5,366 transMapRnaV5,366 transMapV5,472 according augustusGene,114 cpgIslandExt,370 cpgIslandExtUnmasked,373 cpgIslandSuper,370 nestedRepeats,183 acgt chainHg38,683 chainNetHg38,686 chainNetTarSyr2,686 chainTarSyr2,683 netHg38,683 netTarSyr2,683 acid unipModif,5 unipMut,4 uniprot,339 uniprot,351 acids ensGene,196 microsat,126 refSeqComposite,1785 refSeqComposite,1818 simpleRepeat,86 uniprot,620 uniprot,1998 xenoRefGene,353 xenoRefGene,386 acronym uniprot,546 added chainHg38,605 chainNetHg38,608 chainNetTarSyr2,608 chainTarSyr2,605 nestedRepeats,147 netHg38,605 netTarSyr2,605 transMapEnsemblV5,431 transMapEnsemblV5,441 transMapEstV5,400 transMapEstV5,410 transMapRefSeqV5,400 transMapRefSeqV5,410 transMapRnaV5,400 transMapRnaV5,410 transMapV5,506 transMapV5,516 uniprot,1187 additional nestedRepeats,288 rmsk,295 additions refSeqComposite,120 adjust refSeqComposite,748 admin cpgIslandExt,577 cpgIslandExtUnmasked,580 cpgIslandSuper,577 uniprot,1917 advice chainHg38,946 chainHg38,978 chainNetHg38,949 chainNetHg38,981 chainNetTarSyr2,949 chainNetTarSyr2,981 chainTarSyr2,946 chainTarSyr2,978 netHg38,946 netHg38,978 netTarSyr2,946 netTarSyr2,978 advise refSeqComposite,79 af nestedRepeats,372 nestedRepeats,396 rmsk,395 rmsk,419 afa nestedRepeats,325 rmsk,348 affine chainHg38,87 chainNetHg38,90 chainNetTarSyr2,90 chainTarSyr2,87 netHg38,87 netTarSyr2,87 after chainHg38,918 chainNetHg38,921 chainNetTarSyr2,921 chainTarSyr2,918 cpgIslandExt,94 cpgIslandExt,326 cpgIslandExtUnmasked,97 cpgIslandExtUnmasked,329 cpgIslandSuper,94 cpgIslandSuper,326 netHg38,918 netTarSyr2,918 uniprot,294 uniprot,1329 again transMapEnsemblV5,413 transMapEstV5,382 transMapRefSeqV5,382 transMapRnaV5,382 transMapV5,488 uniprot,629 uniprot,1500 against refSeqComposite,1236 transMapEnsemblV5,127 transMapEstV5,96 transMapRefSeqV5,96 transMapRnaV5,96 transMapV5,202 xenoRefGene,224 agarwala windowmaskerSdust,98 agp gap,51 gap,60 gap,67 gold,50 gold,59 gold,66 aids cpgIslandExt,86 cpgIslandExtUnmasked,89 cpgIslandSuper,86 al cpgIslandExt,378 cpgIslandExtUnmasked,381 cpgIslandSuper,378 ensGene,46 ensGene,189 refSeqComposite,1776 transMapEnsemblV5,739 transMapEstV5,708 transMapRefSeqV5,708 transMapRnaV5,708 transMapV5,814 xenoRefGene,344 alejo uniprot,1966 algorithm augustusGene,130 transMapEnsemblV5,28 transMapEstV5,26 transMapRefSeqV5,26 transMapRnaV5,26 transMapV5,25 algorithms uniprot,52 align chainHg38,200 chainNetHg38,203 chainNetTarSyr2,203 chainTarSyr2,200 netHg38,200 netTarSyr2,200 uniprot,1216 alignable chainHg38,22 chainHg38,38 chainNetHg38,25 chainNetHg38,41 chainNetTarSyr2,25 chainNetTarSyr2,41 chainTarSyr2,22 chainTarSyr2,38 netHg38,22 netHg38,38 netTarSyr2,22 netTarSyr2,38 aligned chainHg38,598 chainNetHg38,601 chainNetTarSyr2,601 chainTarSyr2,598 netHg38,598 netTarSyr2,598 refSeqComposite,82 refSeqComposite,191 refSeqComposite,306 refSeqComposite,902 refSeqComposite,1065 refSeqComposite,1235 refSeqComposite,1258 transMapV5,118 uniprot,783 uniprot,973 uniprot,1007 uniprot,1246 uniprot,1335 uniprot,1472 xenoRefGene,223 xenoRefGene,246 aligning chainHg38,137 chainHg38,341 chainHg38,371 chainNetHg38,140 chainNetHg38,344 chainNetHg38,374 chainNetTarSyr2,140 chainNetTarSyr2,344 chainNetTarSyr2,374 chainTarSyr2,137 chainTarSyr2,341 chainTarSyr2,371 netHg38,137 netHg38,341 netHg38,371 netTarSyr2,137 netTarSyr2,341 netTarSyr2,371 uniprot,952 alignment chainHg38,265 chainHg38,1028 chainNetHg38,268 chainNetHg38,1031 chainNetTarSyr2,268 chainNetTarSyr2,1031 chainTarSyr2,265 chainTarSyr2,1028 netHg38,8 netHg38,265 netHg38,1028 netTarSyr2,8 netTarSyr2,265 netTarSyr2,1028 refSeqComposite,195 refSeqComposite,329 refSeqComposite,462 refSeqComposite,1154 refSeqComposite,1247 refSeqComposite,1263 refSeqComposite,1742 transMapEnsemblV5,27 transMapEnsemblV5,79 transMapEnsemblV5,105 transMapEnsemblV5,142 transMapEnsemblV5,198 transMapEnsemblV5,213 transMapEnsemblV5,393 transMapEnsemblV5,436 transMapEstV5,25 transMapEstV5,48 transMapEstV5,74 transMapEstV5,111 transMapEstV5,167 transMapEstV5,182 transMapEstV5,362 transMapEstV5,405 transMapRefSeqV5,25 transMapRefSeqV5,48 transMapRefSeqV5,74 transMapRefSeqV5,111 transMapRefSeqV5,167 transMapRefSeqV5,182 transMapRefSeqV5,362 transMapRefSeqV5,405 transMapRnaV5,25 transMapRnaV5,48 transMapRnaV5,74 transMapRnaV5,111 transMapRnaV5,167 transMapRnaV5,182 transMapRnaV5,362 transMapRnaV5,405 transMapV5,24 transMapV5,49 transMapV5,180 transMapV5,217 transMapV5,273 transMapV5,288 transMapV5,468 transMapV5,511 unipAliSwissprot,4 unipAliTrembl,4 uniprot,108 uniprot,135 uniprot,191 uniprot,807 uniprot,914 uniprot,1175 uniprot,1429 uniprot,1523 uniprot,1620 uniprot,1629 uniprot,1636 uniprot,1642 uniprot,1704 uniprot,1862 xenoRefGene,235 xenoRefGene,251 xenoRefGene,310 alignments augustusGene,300 chainHg38,9 chainHg38,63 chainHg38,456 chainHg38,610 chainHg38,622 chainHg38,630 chainHg38,658 chainHg38,776 chainHg38,1048 chainHg38,1113 chainNetHg38,12 chainNetHg38,66 chainNetHg38,459 chainNetHg38,613 chainNetHg38,625 chainNetHg38,633 chainNetHg38,661 chainNetHg38,779 chainNetHg38,1051 chainNetHg38,1116 chainNetHg38Viewchain,10 chainNetHg38Viewnet,10 chainNetTarSyr2,12 chainNetTarSyr2,66 chainNetTarSyr2,459 chainNetTarSyr2,613 chainNetTarSyr2,625 chainNetTarSyr2,633 chainNetTarSyr2,661 chainNetTarSyr2,779 chainNetTarSyr2,1051 chainNetTarSyr2,1116 chainNetTarSyr2Viewchain,10 chainNetTarSyr2Viewnet,10 chainTarSyr2,9 chainTarSyr2,63 chainTarSyr2,456 chainTarSyr2,610 chainTarSyr2,622 chainTarSyr2,630 chainTarSyr2,658 chainTarSyr2,776 chainTarSyr2,1048 chainTarSyr2,1113 ncbiRefSeqPsl,2 ncbiRefSeqPsl,4 netHg38,63 netHg38,456 netHg38,610 netHg38,622 netHg38,630 netHg38,658 netHg38,776 netHg38,1048 netHg38,1113 netTarSyr2,63 netTarSyr2,456 netTarSyr2,610 netTarSyr2,622 netTarSyr2,630 netTarSyr2,658 netTarSyr2,776 netTarSyr2,1048 netTarSyr2,1113 refSeqComposite,269 refSeqComposite,368 refSeqComposite,435 refSeqComposite,437 refSeqComposite,1215 refSeqComposite,1272 refSeqComposite,1429 rmsk,306 transMapEnsemblV5,21 transMapEnsemblV5,72 transMapEnsemblV5,156 transMapEnsemblV5,169 transMapEnsemblV5,329 transMapEnsemblV5,343 transMapEnsemblV5,353 transMapEnsemblV5,376 transMapEnsemblV5,447 transMapEnsemblV5,459 transMapEnsemblV5,774 transMapEstV5,19 transMapEstV5,41 transMapEstV5,125 transMapEstV5,138 transMapEstV5,298 transMapEstV5,312 transMapEstV5,322 transMapEstV5,345 transMapEstV5,416 transMapEstV5,428 transMapEstV5,743 transMapRefSeqV5,19 transMapRefSeqV5,41 transMapRefSeqV5,125 transMapRefSeqV5,138 transMapRefSeqV5,298 transMapRefSeqV5,312 transMapRefSeqV5,322 transMapRefSeqV5,345 transMapRefSeqV5,416 transMapRefSeqV5,428 transMapRefSeqV5,743 transMapRnaV5,19 transMapRnaV5,41 transMapRnaV5,125 transMapRnaV5,138 transMapRnaV5,298 transMapRnaV5,312 transMapRnaV5,322 transMapRnaV5,345 transMapRnaV5,416 transMapRnaV5,428 transMapRnaV5,743 transMapV5,4 transMapV5,18 transMapV5,40 transMapV5,69 transMapV5,87 transMapV5,129 transMapV5,142 transMapV5,231 transMapV5,244 transMapV5,404 transMapV5,418 transMapV5,428 transMapV5,451 transMapV5,522 transMapV5,534 transMapV5,849 uniprot,82 uniprot,100 uniprot,637 uniprot,793 uniprot,814 uniprot,876 uniprot,1138 uniprot,1148 uniprot,1161 uniprot,1309 uniprot,1410 uniprot,1487 xenoRefGene,260 aligns transMapV5,164 all augustusGene,207 chainHg38,629 chainNetHg38,632 chainNetTarSyr2,632 chainTarSyr2,629 cpgIslandExt,327 cpgIslandExt,527 cpgIslandExtUnmasked,6 cpgIslandExtUnmasked,330 cpgIslandExtUnmasked,530 cpgIslandSuper,327 cpgIslandSuper,527 ncbiRefSeq,2 nestedRepeats,138 nestedRepeats,170 netHg38,629 netTarSyr2,629 refSeqComposite,35 refSeqComposite,86 refSeqComposite,179 refSeqComposite,184 refSeqComposite,200 refSeqComposite,202 refSeqComposite,216 refSeqComposite,346 refSeqComposite,382 refSeqComposite,593 refSeqComposite,796 refSeqComposite,1415 refSeqComposite,1579 refSeqComposite,1671 refSeqComposite,1676 rmsk,65 transMapEnsemblV5,192 transMapEstV5,161 transMapRefSeqV5,161 transMapRnaV5,161 transMapV5,267 uniprot,89 uniprot,121 uniprot,204 uniprot,395 uniprot,956 uniprot,1107 uniprot,1167 uniprot,1311 uniprot,1337 uniprot,1343 uniprot,1418 uniprot,1542 uniprot,1685 uniprot,1979 allows augustusGene,168 chainHg38,82 chainNetHg38,85 chainNetTarSyr2,85 chainTarSyr2,82 netHg38,82 netTarSyr2,82 refSeqComposite,829 transMapEnsemblV5,120 transMapEnsemblV5,291 transMapEstV5,89 transMapEstV5,260 transMapRefSeqV5,89 transMapRefSeqV5,260 transMapRnaV5,89 transMapRnaV5,260 transMapV5,195 transMapV5,366 xenoRefGene,151 aln unipAliSwissprot,2 unipAliTrembl,2 alone augustusGene,33 along transMapEnsemblV5,183 transMapEstV5,152 transMapRefSeqV5,152 transMapRnaV5,152 transMapV5,258 alpha refSeqComposite,419 already chainHg38,821 chainNetHg38,824 chainNetTarSyr2,824 chainTarSyr2,821 netHg38,821 netTarSyr2,821 also chainHg38,93 chainNetHg38,96 chainNetTarSyr2,96 chainTarSyr2,93 cpgIslandExt,531 cpgIslandExtUnmasked,534 cpgIslandSuper,531 ensGene,48 gap,33 gold,35 netHg38,93 netTarSyr2,93 refSeqComposite,1133 refSeqComposite,1326 refSeqComposite,1359 refSeqComposite,1591 transMapEnsemblV5,110 transMapEnsemblV5,145 transMapEnsemblV5,651 transMapEstV5,79 transMapEstV5,114 transMapEstV5,620 transMapRefSeqV5,79 transMapRefSeqV5,114 transMapRefSeqV5,620 transMapRnaV5,79 transMapRnaV5,114 transMapRnaV5,620 transMapV5,185 transMapV5,220 transMapV5,726 uniprot,666 uniprot,706 uniprot,1799 alt uniprot,850 alternating gold,91 alternative augustusGene,122 unipAliSwissprot,16 uniprot,163 uniprot,670 alternatives-from-sampling augustusGene,131 alus rmsk,160 always gold,122 uniprot,503 uniprot,960 uniprot,1411 uniprot,1579 ambiguous refSeqComposite,994 amino unipModif,4 unipMut,3 uniprot,338 uniprot,350 uniprot,619 amount rmsk,215 amsterdam genscan,201 an chainHg38,155 chainHg38,183 chainHg38,189 chainNetHg38,158 chainNetHg38,186 chainNetHg38,192 chainNetTarSyr2,158 chainNetTarSyr2,186 chainNetTarSyr2,192 chainTarSyr2,155 chainTarSyr2,183 chainTarSyr2,189 cpgIslandExt,66 cpgIslandExtUnmasked,69 cpgIslandSuper,66 gc5BaseBw,65 nestedRepeats,196 nestedRepeats,347 netHg38,155 netHg38,183 netHg38,189 netTarSyr2,155 netTarSyr2,183 netTarSyr2,189 refSeqComposite,752 refSeqComposite,823 refSeqComposite,1246 refSeqComposite,1778 rmsk,370 uniprot,765 uniprot,899 uniprot,1203 uniprot,1467 uniprot,1568 xenoRefGene,145 xenoRefGene,234 xenoRefGene,346 analysis refSeqComposite,77 refSeqComposite,1464 transMapEnsemblV5,543 transMapEstV5,512 transMapRefSeqV5,512 transMapRnaV5,512 transMapV5,618 uniprot,1648 uniprot,1728 analyze microsat,122 simpleRepeat,82 and augustusGene,9 augustusGene,60 augustusGene,74 augustusGene,87 augustusGene,206 augustusGene,271 augustusGene,277 augustusGene,296 augustusGene,327 chainHg38,99 chainHg38,115 chainHg38,233 chainHg38,241 chainHg38,255 chainHg38,297 chainHg38,319 chainHg38,445 chainHg38,601 chainHg38,636 chainHg38,646 chainHg38,787 chainHg38,865 chainHg38,897 chainHg38,908 chainHg38,917 chainHg38,942 chainHg38,957 chainHg38,982 chainHg38,988 chainHg38,994 chainHg38,1001 chainHg38,1007 chainHg38,1071 chainHg38,1076 chainNetHg38,10 chainNetHg38,102 chainNetHg38,118 chainNetHg38,236 chainNetHg38,244 chainNetHg38,258 chainNetHg38,300 chainNetHg38,322 chainNetHg38,448 chainNetHg38,604 chainNetHg38,639 chainNetHg38,649 chainNetHg38,790 chainNetHg38,868 chainNetHg38,900 chainNetHg38,911 chainNetHg38,920 chainNetHg38,945 chainNetHg38,960 chainNetHg38,985 chainNetHg38,991 chainNetHg38,997 chainNetHg38,1004 chainNetHg38,1010 chainNetHg38,1074 chainNetHg38,1079 chainNetHg38Viewchain,8 chainNetHg38Viewnet,8 chainNetTarSyr2,10 chainNetTarSyr2,102 chainNetTarSyr2,118 chainNetTarSyr2,236 chainNetTarSyr2,244 chainNetTarSyr2,258 chainNetTarSyr2,300 chainNetTarSyr2,322 chainNetTarSyr2,448 chainNetTarSyr2,604 chainNetTarSyr2,639 chainNetTarSyr2,649 chainNetTarSyr2,790 chainNetTarSyr2,868 chainNetTarSyr2,900 chainNetTarSyr2,911 chainNetTarSyr2,920 chainNetTarSyr2,945 chainNetTarSyr2,960 chainNetTarSyr2,985 chainNetTarSyr2,991 chainNetTarSyr2,997 chainNetTarSyr2,1004 chainNetTarSyr2,1010 chainNetTarSyr2,1074 chainNetTarSyr2,1079 chainNetTarSyr2Viewchain,8 chainNetTarSyr2Viewnet,8 chainTarSyr2,99 chainTarSyr2,115 chainTarSyr2,233 chainTarSyr2,241 chainTarSyr2,255 chainTarSyr2,297 chainTarSyr2,319 chainTarSyr2,445 chainTarSyr2,601 chainTarSyr2,636 chainTarSyr2,646 chainTarSyr2,787 chainTarSyr2,865 chainTarSyr2,897 chainTarSyr2,908 chainTarSyr2,917 chainTarSyr2,942 chainTarSyr2,957 chainTarSyr2,982 chainTarSyr2,988 chainTarSyr2,994 chainTarSyr2,1001 chainTarSyr2,1007 chainTarSyr2,1071 chainTarSyr2,1076 cpgIslandExt,12 cpgIslandExt,35 cpgIslandExt,183 cpgIslandExt,244 cpgIslandExt,248 cpgIslandExt,295 cpgIslandExt,508 cpgIslandExt,599 cpgIslandExtUnmasked,15 cpgIslandExtUnmasked,38 cpgIslandExtUnmasked,186 cpgIslandExtUnmasked,247 cpgIslandExtUnmasked,251 cpgIslandExtUnmasked,298 cpgIslandExtUnmasked,511 cpgIslandExtUnmasked,602 cpgIslandSuper,12 cpgIslandSuper,35 cpgIslandSuper,183 cpgIslandSuper,244 cpgIslandSuper,248 cpgIslandSuper,295 cpgIslandSuper,508 cpgIslandSuper,599 cytoBandIdeo,8 ensGene,6 ensGene,128 gap,5 gap,82 gap,104 gc5BaseBw,9 gc5BaseBw,22 gc5BaseBw,74 genscan,7 genscan,30 genscan,40 genscan,46 genscan,63 genscan,83 genscan,97 genscan,108 genscan,119 genscan,138 genscan,147 gold,6 gold,93 gold,107 gold,113 microsat,4 microsat,8 microsat,33 microsat,36 microsat,67 microsat,72 microsat,75 ncbiRefSeq,7 ncbiRefSeq,16 ncbiRefSeqGenomicDiff,8 ncbiRefSeqGenomicDiff,13 ncbiRefSeqOther,16 ncbiRefSeqPredicted,12 ncbiRefSeqPsl,8 nestedRepeats,12 nestedRepeats,38 nestedRepeats,113 nestedRepeats,162 nestedRepeats,166 nestedRepeats,231 nestedRepeats,256 nestedRepeats,309 nestedRepeats,315 nestedRepeats,346 nestedRepeats,375 netHg38,99 netHg38,115 netHg38,233 netHg38,241 netHg38,255 netHg38,297 netHg38,319 netHg38,445 netHg38,601 netHg38,636 netHg38,646 netHg38,787 netHg38,865 netHg38,897 netHg38,908 netHg38,917 netHg38,942 netHg38,957 netHg38,982 netHg38,988 netHg38,994 netHg38,1001 netHg38,1007 netHg38,1071 netHg38,1076 netTarSyr2,99 netTarSyr2,115 netTarSyr2,233 netTarSyr2,241 netTarSyr2,255 netTarSyr2,297 netTarSyr2,319 netTarSyr2,445 netTarSyr2,601 netTarSyr2,636 netTarSyr2,646 netTarSyr2,787 netTarSyr2,865 netTarSyr2,897 netTarSyr2,908 netTarSyr2,917 netTarSyr2,942 netTarSyr2,957 netTarSyr2,982 netTarSyr2,988 netTarSyr2,994 netTarSyr2,1001 netTarSyr2,1007 netTarSyr2,1071 netTarSyr2,1076 refSeqComposite,8 refSeqComposite,23 refSeqComposite,73 refSeqComposite,111 refSeqComposite,121 refSeqComposite,144 refSeqComposite,193 refSeqComposite,204 refSeqComposite,232 refSeqComposite,258 refSeqComposite,266 refSeqComposite,274 refSeqComposite,302 refSeqComposite,366 refSeqComposite,472 refSeqComposite,496 refSeqComposite,579 refSeqComposite,598 refSeqComposite,661 refSeqComposite,671 refSeqComposite,711 refSeqComposite,723 refSeqComposite,809 refSeqComposite,834 refSeqComposite,867 refSeqComposite,887 refSeqComposite,919 refSeqComposite,961 refSeqComposite,977 refSeqComposite,1000 refSeqComposite,1015 refSeqComposite,1132 refSeqComposite,1151 refSeqComposite,1177 refSeqComposite,1182 refSeqComposite,1283 refSeqComposite,1378 refSeqComposite,1480 refSeqComposite,1498 refSeqComposite,1638 refSeqComposite,1679 refSeqComposite,1729 refSeqComposite,1815 rmsk,7 rmsk,28 rmsk,137 rmsk,221 rmsk,332 rmsk,338 rmsk,369 rmsk,398 simpleRepeat,9 simpleRepeat,42 transMapEnsemblV5,5 transMapEnsemblV5,11 transMapEnsemblV5,43 transMapEnsemblV5,95 transMapEnsemblV5,175 transMapEnsemblV5,200 transMapEnsemblV5,369 transMapEnsemblV5,371 transMapEnsemblV5,395 transMapEnsemblV5,412 transMapEnsemblV5,438 transMapEnsemblV5,469 transMapEnsemblV5,485 transMapEnsemblV5,500 transMapEnsemblV5,557 transMapEnsemblV5,642 transMapEnsemblV5,691 transMapEnsemblV5,705 transMapEnsemblV5,712 transMapEnsemblV5,770 transMapEstV5,9 transMapEstV5,64 transMapEstV5,144 transMapEstV5,169 transMapEstV5,338 transMapEstV5,340 transMapEstV5,364 transMapEstV5,381 transMapEstV5,407 transMapEstV5,438 transMapEstV5,454 transMapEstV5,469 transMapEstV5,526 transMapEstV5,611 transMapEstV5,660 transMapEstV5,674 transMapEstV5,681 transMapEstV5,739 transMapRefSeqV5,10 transMapRefSeqV5,64 transMapRefSeqV5,144 transMapRefSeqV5,169 transMapRefSeqV5,338 transMapRefSeqV5,340 transMapRefSeqV5,364 transMapRefSeqV5,381 transMapRefSeqV5,407 transMapRefSeqV5,438 transMapRefSeqV5,454 transMapRefSeqV5,469 transMapRefSeqV5,526 transMapRefSeqV5,611 transMapRefSeqV5,660 transMapRefSeqV5,674 transMapRefSeqV5,681 transMapRefSeqV5,739 transMapRnaV5,10 transMapRnaV5,64 transMapRnaV5,144 transMapRnaV5,169 transMapRnaV5,338 transMapRnaV5,340 transMapRnaV5,364 transMapRnaV5,381 transMapRnaV5,407 transMapRnaV5,438 transMapRnaV5,454 transMapRnaV5,469 transMapRnaV5,526 transMapRnaV5,611 transMapRnaV5,660 transMapRnaV5,674 transMapRnaV5,681 transMapRnaV5,739 transMapV5,8 transMapV5,16 transMapV5,75 transMapV5,89 transMapV5,140 transMapV5,163 transMapV5,170 transMapV5,250 transMapV5,275 transMapV5,444 transMapV5,446 transMapV5,470 transMapV5,487 transMapV5,513 transMapV5,544 transMapV5,560 transMapV5,575 transMapV5,632 transMapV5,717 transMapV5,766 transMapV5,780 transMapV5,787 transMapV5,845 ucscToINSDC,11 ucscToRefSeq,6 unipAliSwissprot,19 unipAliTrembl,11 unipChain,9 unipConflict,7 unipDisulfBond,7 unipDomain,5 unipInterest,7 unipLocCytopl,6 unipLocExtra,6 unipLocSignal,7 unipLocTransMemb,6 unipModif,8 unipMut,7 unipOther,7 unipRepeat,5 unipStruct,9 uniprot,8 uniprot,17 uniprot,174 uniprot,329 uniprot,345 uniprot,355 uniprot,369 uniprot,378 uniprot,403 uniprot,433 uniprot,439 uniprot,448 uniprot,488 uniprot,517 uniprot,568 uniprot,589 uniprot,611 uniprot,617 uniprot,702 uniprot,761 uniprot,796 uniprot,866 uniprot,926 uniprot,939 uniprot,1122 uniprot,1214 uniprot,1310 uniprot,1342 uniprot,1375 uniprot,1420 uniprot,1465 uniprot,1498 uniprot,1598 uniprot,1617 uniprot,1650 uniprot,1691 uniprot,1790 uniprot,1898 uniprot,1958 uniprot,1970 uniprot,2028 uniprot,2036 windowmaskerSdust,10 xenoRefGene,9 xenoRefGene,18 xenoRefGene,47 xenoRefGene,81 xenoRefGene,131 xenoRefGene,156 xenoRefGene,189 xenoRefGene,202 xenoRefGene,271 xenoRefGene,298 xenoRefGene,383 annot unipOther,2 annotated refSeqComposite,562 rmsk,67 uniprot,736 uniprot,994 uniprot,1014 uniprot,1027 uniprot,1034 uniprot,1040 uniprot,1053 uniprot,1082 uniprot,1233 uniprot,1265 annotation chainHg38,308 chainNetHg38,311 chainNetTarSyr2,311 chainTarSyr2,308 ensGene,165 netHg38,308 netTarSyr2,308 refSeqComposite,68 refSeqComposite,672 refSeqComposite,1121 refSeqComposite,1150 refSeqComposite,1196 rmsk,38 transMapEnsemblV5,612 transMapEstV5,581 transMapRefSeqV5,581 transMapRnaV5,581 transMapV5,687 uniprot,143 uniprot,466 uniprot,487 uniprot,530 uniprot,605 uniprot,624 uniprot,1731 annotationonprotein uniprot,1929 annotations ensGene,156 genscan,120 ncbiRefSeqOther,6 nestedRepeats,71 refSeqComposite,192 refSeqComposite,198 refSeqComposite,206 refSeqComposite,221 refSeqComposite,350 refSeqComposite,384 refSeqComposite,486 refSeqComposite,868 refSeqComposite,1476 refSeqComposite,1508 refSeqComposite,1544 transMapEnsemblV5,60 transMapEnsemblV5,545 transMapEnsemblV5,706 transMapEnsemblV5,714 transMapEstV5,514 transMapEstV5,675 transMapEstV5,683 transMapRefSeqV5,514 transMapRefSeqV5,675 transMapRefSeqV5,683 transMapRnaV5,514 transMapRnaV5,675 transMapRnaV5,683 transMapV5,77 transMapV5,620 transMapV5,781 transMapV5,789 unipOther,5 unipStruct,7 uniprot,6 uniprot,18 uniprot,54 uniprot,96 uniprot,128 uniprot,171 uniprot,212 uniprot,363 uniprot,394 uniprot,397 uniprot,455 uniprot,501 uniprot,595 uniprot,631 uniprot,662 uniprot,704 uniprot,718 uniprot,763 uniprot,1438 uniprot,1504 uniprot,1514 uniprot,1757 xenoRefGene,190 another refSeqComposite,328 transMapV5,82 any refSeqComposite,275 refSeqComposite,1361 uniprot,660 uniprot,1146 uniprot,1250 api cpgIslandExt,519 cpgIslandExtUnmasked,522 cpgIslandSuper,519 ensGene,109 refSeqComposite,1317 refSeqComposite,1371 transMapEnsemblV5,569 transMapEstV5,538 transMapRefSeqV5,538 transMapRnaV5,538 transMapV5,644 appending transMapEnsemblV5,402 transMapEstV5,371 transMapRefSeqV5,371 transMapRnaV5,371 transMapV5,477 approach uniprot,1531 appropriate refSeqComposite,779 xenoRefGene,114 apr genscan,224 refSeqComposite,1747 xenoRefGene,315 apsects gc5BaseBw,51 arbitrary refSeqComposite,945 archive ensGene,142 refSeqComposite,1713 uniprot,893 uniprot,1670 uniprot,1908 archives refSeqComposite,1352 refSeqComposite,1697 uniprot,1832 are augustusGene,27 chainHg38,21 chainHg38,40 chainHg38,53 chainHg38,144 chainHg38,216 chainHg38,227 chainHg38,330 chainHg38,399 chainHg38,420 chainHg38,427 chainHg38,510 chainHg38,703 chainNetHg38,24 chainNetHg38,43 chainNetHg38,56 chainNetHg38,147 chainNetHg38,219 chainNetHg38,230 chainNetHg38,333 chainNetHg38,402 chainNetHg38,423 chainNetHg38,430 chainNetHg38,513 chainNetHg38,706 chainNetTarSyr2,24 chainNetTarSyr2,43 chainNetTarSyr2,56 chainNetTarSyr2,147 chainNetTarSyr2,219 chainNetTarSyr2,230 chainNetTarSyr2,333 chainNetTarSyr2,402 chainNetTarSyr2,423 chainNetTarSyr2,430 chainNetTarSyr2,513 chainNetTarSyr2,706 chainTarSyr2,21 chainTarSyr2,40 chainTarSyr2,53 chainTarSyr2,144 chainTarSyr2,216 chainTarSyr2,227 chainTarSyr2,330 chainTarSyr2,399 chainTarSyr2,420 chainTarSyr2,427 chainTarSyr2,510 chainTarSyr2,703 cpgIslandExt,8 cpgIslandExt,17 cpgIslandExt,28 cpgIslandExt,116 cpgIslandExt,149 cpgIslandExt,153 cpgIslandExtUnmasked,11 cpgIslandExtUnmasked,20 cpgIslandExtUnmasked,31 cpgIslandExtUnmasked,119 cpgIslandExtUnmasked,152 cpgIslandExtUnmasked,156 cpgIslandSuper,8 cpgIslandSuper,17 cpgIslandSuper,28 cpgIslandSuper,116 cpgIslandSuper,149 cpgIslandSuper,153 ensGene,81 ensGene,121 gap,25 gap,70 genscan,25 genscan,160 gold,27 gold,85 gold,102 microsat,16 microsat,25 microsat,52 nestedRepeats,74 nestedRepeats,102 nestedRepeats,140 nestedRepeats,146 nestedRepeats,164 nestedRepeats,172 nestedRepeats,181 nestedRepeats,209 nestedRepeats,274 nestedRepeats,281 netHg38,21 netHg38,40 netHg38,53 netHg38,144 netHg38,216 netHg38,227 netHg38,330 netHg38,399 netHg38,420 netHg38,427 netHg38,510 netHg38,703 netTarSyr2,21 netTarSyr2,40 netTarSyr2,53 netTarSyr2,144 netTarSyr2,216 netTarSyr2,227 netTarSyr2,330 netTarSyr2,399 netTarSyr2,420 netTarSyr2,427 netTarSyr2,510 netTarSyr2,703 refSeqComposite,181 refSeqComposite,234 refSeqComposite,408 refSeqComposite,429 refSeqComposite,772 refSeqComposite,897 refSeqComposite,939 refSeqComposite,1003 refSeqComposite,1030 refSeqComposite,1348 refSeqComposite,1382 refSeqComposite,1405 refSeqComposite,1483 rmsk,43 rmsk,288 rmsk,304 rmsk,312 simpleRepeat,49 transMapEnsemblV5,55 transMapEnsemblV5,73 transMapEnsemblV5,457 transMapEnsemblV5,464 transMapEnsemblV5,473 transMapEnsemblV5,507 transMapEnsemblV5,517 transMapEnsemblV5,546 transMapEnsemblV5,585 transMapEstV5,42 transMapEstV5,426 transMapEstV5,433 transMapEstV5,442 transMapEstV5,476 transMapEstV5,486 transMapEstV5,515 transMapEstV5,554 transMapRefSeqV5,42 transMapRefSeqV5,426 transMapRefSeqV5,433 transMapRefSeqV5,442 transMapRefSeqV5,476 transMapRefSeqV5,486 transMapRefSeqV5,515 transMapRefSeqV5,554 transMapRnaV5,42 transMapRnaV5,426 transMapRnaV5,433 transMapRnaV5,442 transMapRnaV5,476 transMapRnaV5,486 transMapRnaV5,515 transMapRnaV5,554 transMapV5,41 transMapV5,70 transMapV5,532 transMapV5,539 transMapV5,548 transMapV5,582 transMapV5,592 transMapV5,621 transMapV5,660 uniprot,55 uniprot,93 uniprot,124 uniprot,146 uniprot,165 uniprot,175 uniprot,208 uniprot,456 uniprot,502 uniprot,555 uniprot,579 uniprot,596 uniprot,644 uniprot,679 uniprot,735 uniprot,868 uniprot,880 uniprot,1006 uniprot,1013 uniprot,1033 uniprot,1061 uniprot,1086 uniprot,1117 uniprot,1149 uniprot,1318 uniprot,1350 uniprot,1425 uniprot,1433 uniprot,1454 uniprot,1659 uniprot,1867 uniprot,1895 xenoRefGene,42 xenoRefGene,107 xenoRefGene,205 areas cpgIslandExt,305 cpgIslandExtUnmasked,308 cpgIslandSuper,305 gc5BaseBw,37 arian chainHg38,955 chainNetHg38,958 chainNetTarSyr2,958 chainTarSyr2,955 nestedRepeats,305 netHg38,955 netTarSyr2,955 rmsk,16 rmsk,328 arrangement cpgIslandExt,67 cpgIslandExtUnmasked,70 cpgIslandSuper,67 arrows nestedRepeats,145 nestedRepeats,163 articles refSeqComposite,1109 as augustusGene,77 augustusGene,79 chainHg38,472 chainHg38,512 chainHg38,535 chainHg38,550 chainHg38,814 chainHg38,869 chainHg38,927 chainNetHg38,475 chainNetHg38,515 chainNetHg38,538 chainNetHg38,553 chainNetHg38,817 chainNetHg38,872 chainNetHg38,930 chainNetTarSyr2,475 chainNetTarSyr2,515 chainNetTarSyr2,538 chainNetTarSyr2,553 chainNetTarSyr2,817 chainNetTarSyr2,872 chainNetTarSyr2,930 chainTarSyr2,472 chainTarSyr2,512 chainTarSyr2,535 chainTarSyr2,550 chainTarSyr2,814 chainTarSyr2,869 chainTarSyr2,927 cpgIslandExt,165 cpgIslandExt,548 cpgIslandExt,550 cpgIslandExtUnmasked,168 cpgIslandExtUnmasked,551 cpgIslandExtUnmasked,553 cpgIslandSuper,165 cpgIslandSuper,548 cpgIslandSuper,550 ensGene,87 gap,72 genscan,35 genscan,37 microsat,21 nestedRepeats,125 netHg38,472 netHg38,512 netHg38,535 netHg38,550 netHg38,814 netHg38,869 netHg38,927 netTarSyr2,472 netTarSyr2,512 netTarSyr2,535 netTarSyr2,550 netTarSyr2,814 netTarSyr2,869 netTarSyr2,927 refSeqComposite,415 refSeqComposite,510 refSeqComposite,530 refSeqComposite,543 refSeqComposite,630 refSeqComposite,898 refSeqComposite,1227 refSeqComposite,1410 refSeqComposite,1526 refSeqComposite,1646 rmsk,53 rmsk,55 transMapEnsemblV5,65 transMapEnsemblV5,189 transMapEnsemblV5,217 transMapEnsemblV5,229 transMapEnsemblV5,519 transMapEnsemblV5,630 transMapEstV5,158 transMapEstV5,186 transMapEstV5,198 transMapEstV5,488 transMapEstV5,599 transMapRefSeqV5,158 transMapRefSeqV5,186 transMapRefSeqV5,198 transMapRefSeqV5,488 transMapRefSeqV5,599 transMapRnaV5,158 transMapRnaV5,186 transMapRnaV5,198 transMapRnaV5,488 transMapRnaV5,599 transMapV5,264 transMapV5,292 transMapV5,304 transMapV5,594 transMapV5,705 uniprot,307 uniprot,598 uniprot,600 uniprot,621 uniprot,1100 uniprot,1778 windowmaskerSdust,18 ascii uniprot,1762 ask refSeqComposite,124 aspect refSeqComposite,713 assemblies augustusGene,196 augustusGene,237 chainHg38,329 chainHg38,593 chainNetHg38,332 chainNetHg38,596 chainNetTarSyr2,332 chainNetTarSyr2,596 chainTarSyr2,329 chainTarSyr2,593 netHg38,329 netHg38,593 netTarSyr2,329 netTarSyr2,593 refSeqComposite,185 rmsk,107 transMapEnsemblV5,194 transMapEstV5,163 transMapRefSeqV5,163 transMapRnaV5,163 transMapV5,269 assembly augustusGene,197 chainHg38,153 chainHg38,162 chainHg38,316 chainNetHg38,156 chainNetHg38,165 chainNetHg38,319 chainNetTarSyr2,156 chainNetTarSyr2,165 chainNetTarSyr2,319 chainTarSyr2,153 chainTarSyr2,162 chainTarSyr2,316 gap,21 gap,23 gap,30 gap,39 gap,47 gap,118 gold,1 gold,2 gold,23 gold,25 gold,32 gold,41 gold,46 netHg38,153 netHg38,162 netHg38,316 netTarSyr2,153 netTarSyr2,162 netTarSyr2,316 refSeqComposite,372 refSeqComposite,482 transMapV5,107 transMapV5,125 transMapV5,136 ucscToINSDC,40 ucscToRefSeq,34 uniprot,445 uniprot,701 assembly.2bit cpgIslandExt,412 cpgIslandExtUnmasked,415 cpgIslandSuper,412 assessing refSeqComposite,657 assigned transMapEnsemblV5,465 transMapEstV5,434 transMapRefSeqV5,434 transMapRnaV5,434 transMapV5,540 associated cpgIslandExt,18 cpgIslandExt,38 cpgIslandExt,510 cpgIslandExtUnmasked,21 cpgIslandExtUnmasked,41 cpgIslandExtUnmasked,513 cpgIslandSuper,18 cpgIslandSuper,38 cpgIslandSuper,510 gc5BaseBw,34 refSeqComposite,1406 rmsk,224 simpleRepeat,51 transMapEnsemblV5,586 transMapEstV5,555 transMapRefSeqV5,555 transMapRnaV5,555 transMapV5,661 uniprot,787 associates ucscToINSDC,16 ucscToRefSeq,11 association refSeqComposite,689 astashyn refSeqComposite,1763 xenoRefGene,331 at chainHg38,429 chainHg38,809 chainHg38,931 chainHg38,966 chainHg38,971 chainHg38,1012 chainNetHg38,432 chainNetHg38,812 chainNetHg38,934 chainNetHg38,969 chainNetHg38,974 chainNetHg38,1015 chainNetTarSyr2,432 chainNetTarSyr2,812 chainNetTarSyr2,934 chainNetTarSyr2,969 chainNetTarSyr2,974 chainNetTarSyr2,1015 chainTarSyr2,429 chainTarSyr2,809 chainTarSyr2,931 chainTarSyr2,966 chainTarSyr2,971 chainTarSyr2,1012 cpgIslandExt,155 cpgIslandExt,218 cpgIslandExt,235 cpgIslandExtUnmasked,158 cpgIslandExtUnmasked,221 cpgIslandExtUnmasked,238 cpgIslandSuper,155 cpgIslandSuper,218 cpgIslandSuper,235 microsat,28 microsat,77 netHg38,429 netHg38,809 netHg38,931 netHg38,966 netHg38,971 netHg38,1012 netTarSyr2,429 netTarSyr2,809 netTarSyr2,931 netTarSyr2,966 netTarSyr2,971 netTarSyr2,1012 refSeqComposite,739 refSeqComposite,1054 refSeqComposite,1158 refSeqComposite,1284 refSeqComposite,1721 rmsk,243 rmsk,267 transMapEnsemblV5,297 transMapEnsemblV5,687 transMapEstV5,266 transMapEstV5,656 transMapRefSeqV5,266 transMapRefSeqV5,656 transMapRnaV5,266 transMapRnaV5,656 transMapV5,119 transMapV5,372 transMapV5,762 ucscToINSDC,3 uniprot,825 uniprot,1946 uniprot,1991 xenoRefGene,95 xenoRefGene,272 xenoRefGene,288 augustus augustusGene,1 augustusGene,2 augustusGene,22 augustusGene,148 augustusGene,256 uniprot,835 uniprot,867 auml windowmaskerSdust,95 automated transMapEnsemblV5,542 transMapEstV5,511 transMapRefSeqV5,511 transMapRnaV5,511 transMapV5,617 uniprot,1468 uniprot,1727 automatically uniprot,1565 av uniprot,2015 available augustusGene,239 cpgIslandExt,543 cpgIslandExtUnmasked,546 cpgIslandSuper,543 ensGene,82 ensGene,122 nestedRepeats,259 nestedRepeats,276 refSeqComposite,182 refSeqComposite,278 refSeqComposite,479 refSeqComposite,573 refSeqComposite,658 refSeqComposite,1349 refSeqComposite,1601 rmsk,73 transMapEnsemblV5,190 transMapEnsemblV5,249 transMapEstV5,159 transMapEstV5,218 transMapRefSeqV5,159 transMapRefSeqV5,218 transMapRnaV5,159 transMapRnaV5,218 transMapV5,265 transMapV5,324 uniprot,881 uniprot,1660 uniprot,1981 windowmaskerSdust,40 average nestedRepeats,186 nestedRepeats,221 aware uniprot,1456 awk cpgIslandExt,424 cpgIslandExtUnmasked,427 cpgIslandSuper,424 axt chainHg38,614 chainHg38,621 chainNetHg38,617 chainNetHg38,624 chainNetTarSyr2,617 chainNetTarSyr2,624 chainTarSyr2,614 chainTarSyr2,621 netHg38,614 netHg38,621 netTarSyr2,614 netTarSyr2,621 axtchain chainHg38,626 chainHg38,714 chainHg38,962 chainNetHg38,629 chainNetHg38,717 chainNetHg38,965 chainNetTarSyr2,629 chainNetTarSyr2,717 chainNetTarSyr2,965 chainTarSyr2,626 chainTarSyr2,714 chainTarSyr2,962 netHg38,626 netHg38,714 netHg38,962 netTarSyr2,626 netTarSyr2,714 netTarSyr2,962 b transMapEnsemblV5,723 transMapEnsemblV5,733 transMapEstV5,692 transMapEstV5,702 transMapRefSeqV5,692 transMapRefSeqV5,702 transMapRnaV5,692 transMapRnaV5,702 transMapV5,798 transMapV5,808 back chainHg38,606 chainNetHg38,609 chainNetTarSyr2,609 chainTarSyr2,606 netHg38,606 netTarSyr2,606 baertsch augustusGene,290 chainHg38,1000 chainHg38,1058 chainHg38,1104 chainNetHg38,1003 chainNetHg38,1061 chainNetHg38,1107 chainNetTarSyr2,1003 chainNetTarSyr2,1061 chainNetTarSyr2,1107 chainTarSyr2,1000 chainTarSyr2,1058 chainTarSyr2,1104 netHg38,1000 netHg38,1058 netHg38,1104 netTarSyr2,1000 netTarSyr2,1058 netTarSyr2,1104 transMapEnsemblV5,764 transMapEstV5,733 transMapRefSeqV5,733 transMapRnaV5,733 transMapV5,839 bairoch uniprot,2022 band cytoBandIdeo,2 barker ensGene,170 base cpgIslandExt,46 cpgIslandExt,53 cpgIslandExt,234 cpgIslandExtUnmasked,49 cpgIslandExtUnmasked,56 cpgIslandExtUnmasked,237 cpgIslandSuper,46 cpgIslandSuper,53 cpgIslandSuper,234 refSeqComposite,1267 refSeqComposite,1275 refSeqComposite,1287 rmsk,217 rmsk,219 rmsk,222 xenoRefGene,255 xenoRefGene,263 xenoRefGene,275 base-level transMapEnsemblV5,323 transMapEstV5,292 transMapRefSeqV5,292 transMapRnaV5,292 transMapV5,398 based augustusGene,28 chainHg38,332 chainHg38,358 chainNetHg38,335 chainNetHg38,361 chainNetTarSyr2,335 chainNetTarSyr2,361 chainTarSyr2,332 chainTarSyr2,358 genscan,26 netHg38,332 netHg38,358 netTarSyr2,332 netTarSyr2,358 refSeqComposite,253 refSeqComposite,361 uniprot,60 uniprot,727 uniprot,1604 bases cpgIslandExt,7 cpgIslandExt,353 cpgIslandExtUnmasked,10 cpgIslandExtUnmasked,356 cpgIslandSuper,7 cpgIslandSuper,353 gap,140 gc5BaseBw,25 refSeqComposite,905 transMapV5,167 basis cpgIslandExt,289 cpgIslandExtUnmasked,292 cpgIslandSuper,289 uniprot,1570 bc149621.1 transMapEnsemblV5,462 transMapEstV5,431 transMapRefSeqV5,431 transMapRnaV5,431 transMapV5,537 bc149621.1-1 transMapEnsemblV5,468 transMapEnsemblV5,479 transMapEstV5,437 transMapEstV5,448 transMapRefSeqV5,437 transMapRefSeqV5,448 transMapRnaV5,437 transMapRnaV5,448 transMapV5,543 transMapV5,554 bc149621.1-1.1 transMapEnsemblV5,490 transMapEstV5,459 transMapRefSeqV5,459 transMapRnaV5,459 transMapV5,565 bc149621.1-2 transMapEnsemblV5,470 transMapEnsemblV5,492 transMapEstV5,439 transMapEstV5,461 transMapRefSeqV5,439 transMapRefSeqV5,461 transMapRnaV5,439 transMapRnaV5,461 transMapV5,545 transMapV5,567 bc149621.1-2.1 transMapEnsemblV5,499 transMapEstV5,468 transMapRefSeqV5,468 transMapRnaV5,468 transMapV5,574 bc149621.1-2.2 transMapEnsemblV5,501 transMapEstV5,470 transMapRefSeqV5,470 transMapRnaV5,470 transMapV5,576 be augustusGene,99 chainHg38,110 chainHg38,439 chainNetHg38,113 chainNetHg38,442 chainNetTarSyr2,113 chainNetTarSyr2,442 chainTarSyr2,110 chainTarSyr2,439 cpgIslandExt,37 cpgIslandExt,70 cpgIslandExt,187 cpgIslandExt,513 cpgIslandExt,532 cpgIslandExt,561 cpgIslandExt,572 cpgIslandExtUnmasked,40 cpgIslandExtUnmasked,73 cpgIslandExtUnmasked,190 cpgIslandExtUnmasked,516 cpgIslandExtUnmasked,535 cpgIslandExtUnmasked,564 cpgIslandExtUnmasked,575 cpgIslandSuper,37 cpgIslandSuper,70 cpgIslandSuper,187 cpgIslandSuper,513 cpgIslandSuper,532 cpgIslandSuper,561 cpgIslandSuper,572 ensGene,61 ensGene,104 ensGene,138 gc5BaseBw,41 microsat,19 microsat,39 nestedRepeats,269 nestedRepeats,291 netHg38,110 netHg38,439 netTarSyr2,110 netTarSyr2,439 refSeqComposite,305 refSeqComposite,733 refSeqComposite,943 refSeqComposite,974 refSeqComposite,1034 refSeqComposite,1111 refSeqComposite,1199 refSeqComposite,1304 refSeqComposite,1311 refSeqComposite,1327 refSeqComposite,1399 refSeqComposite,1459 refSeqComposite,1490 refSeqComposite,1510 refSeqComposite,1518 refSeqComposite,1592 refSeqComposite,1614 refSeqComposite,1684 refSeqComposite,1709 rmsk,278 rmsk,284 rmsk,298 simpleRepeat,44 transMapEnsemblV5,63 transMapEnsemblV5,111 transMapEnsemblV5,146 transMapEnsemblV5,530 transMapEnsemblV5,559 transMapEnsemblV5,614 transMapEnsemblV5,622 transMapEnsemblV5,645 transMapEnsemblV5,652 transMapEstV5,80 transMapEstV5,115 transMapEstV5,499 transMapEstV5,528 transMapEstV5,583 transMapEstV5,591 transMapEstV5,614 transMapEstV5,621 transMapRefSeqV5,80 transMapRefSeqV5,115 transMapRefSeqV5,499 transMapRefSeqV5,528 transMapRefSeqV5,583 transMapRefSeqV5,591 transMapRefSeqV5,614 transMapRefSeqV5,621 transMapRnaV5,80 transMapRnaV5,115 transMapRnaV5,499 transMapRnaV5,528 transMapRnaV5,583 transMapRnaV5,591 transMapRnaV5,614 transMapRnaV5,621 transMapV5,186 transMapV5,221 transMapV5,605 transMapV5,634 transMapV5,689 transMapV5,697 transMapV5,720 transMapV5,727 uniprot,181 uniprot,246 uniprot,1094 uniprot,1105 uniprot,1143 uniprot,1197 uniprot,1270 uniprot,1327 uniprot,1556 uniprot,1694 uniprot,1715 uniprot,1740 uniprot,1750 uniprot,1759 uniprot,1770 uniprot,1793 uniprot,1800 uniprot,1882 xenoRefGene,90 because cpgIslandExt,61 cpgIslandExt,107 cpgIslandExtUnmasked,64 cpgIslandExtUnmasked,110 cpgIslandSuper,61 cpgIslandSuper,107 uniprot,674 bed3 windowmaskerSdust,76 been chainHg38,580 chainNetHg38,583 chainNetTarSyr2,583 chainTarSyr2,580 nestedRepeats,89 netHg38,580 netTarSyr2,580 refSeqComposite,643 refSeqComposite,681 refSeqComposite,691 refSeqComposite,706 rmsk,70 rmsk,109 uniprot,34 uniprot,47 uniprot,303 uniprot,1043 before chainHg38,916 chainNetHg38,919 chainNetTarSyr2,919 chainTarSyr2,916 netHg38,916 netTarSyr2,916 uniprot,934 begin refSeqComposite,224 refSeqComposite,353 beginning refSeqComposite,1056 refSeqComposite,1655 beloow refSeqComposite,339 below chainHg38,690 chainNetHg38,693 chainNetTarSyr2,693 chainTarSyr2,690 ensGene,54 genscan,154 genscan,168 nestedRepeats,68 netHg38,690 netTarSyr2,690 refSeqComposite,1401 refSeqComposite,1538 rmsk,104 uniprot,73 uniprot,92 uniprot,189 uniprot,207 uniprot,769 uniprot,898 benson microsat,102 microsat,112 microsat,114 simpleRepeat,64 simpleRepeat,72 simpleRepeat,74 best chainHg38,273 chainHg38,522 chainNetHg38,276 chainNetHg38,525 chainNetTarSyr2,276 chainNetTarSyr2,525 chainTarSyr2,273 chainTarSyr2,522 netHg38,273 netHg38,522 netTarSyr2,273 netTarSyr2,522 refSeqComposite,1282 transMapEnsemblV5,244 transMapEstV5,213 transMapRefSeqV5,213 transMapRnaV5,213 transMapV5,68 transMapV5,319 uniprot,1074 uniprot,1415 xenoRefGene,270 beta uniprot,364 between chainHg38,51 chainHg38,631 chainHg38,863 chainNetHg38,54 chainNetHg38,634 chainNetHg38,866 chainNetTarSyr2,54 chainNetTarSyr2,634 chainNetTarSyr2,866 chainTarSyr2,51 chainTarSyr2,631 chainTarSyr2,863 gap,128 gold,99 gold,104 ncbiRefSeqGenomicDiff,4 netHg38,51 netHg38,631 netHg38,863 netTarSyr2,51 netTarSyr2,631 netTarSyr2,863 refSeqComposite,66 refSeqComposite,464 refSeqComposite,882 uniprot,375 uniprot,922 uniprot,1371 uniprot,1615 bias uniprot,400 bigbed refSeqComposite,1385 refSeqComposite,1396 refSeqComposite,1486 uniprot,1736 bigbedtobed refSeqComposite,1515 refSeqComposite,1555 transMapEnsemblV5,619 transMapEnsemblV5,664 transMapEstV5,588 transMapEstV5,633 transMapRefSeqV5,588 transMapRefSeqV5,633 transMapRnaV5,588 transMapRnaV5,633 transMapV5,694 transMapV5,739 uniprot,1767 uniprot,1812 bigpsl transMapEnsemblV5,549 transMapEstV5,518 transMapRefSeqV5,518 transMapRnaV5,518 transMapV5,624 bin refSeqComposite,1441 refSeqComposite,1471 binaries transMapEnsemblV5,643 transMapEstV5,612 transMapRefSeqV5,612 transMapRnaV5,612 transMapV5,718 uniprot,1791 binary cpgIslandExt,570 cpgIslandExtUnmasked,573 cpgIslandSuper,570 refSeqComposite,1529 transMapEnsemblV5,633 transMapEstV5,602 transMapRefSeqV5,602 transMapRnaV5,602 transMapV5,708 uniprot,1781 biocomput chainHg38,1051 chainNetHg38,1054 chainNetTarSyr2,1054 chainTarSyr2,1051 netHg38,1051 netTarSyr2,1051 bioinformatics augustusGene,307 augustusGene,332 transMapEnsemblV5,781 transMapEstV5,750 transMapRefSeqV5,750 transMapRnaV5,750 transMapV5,856 windowmaskerSdust,106 biol cpgIslandExt,615 cpgIslandExtUnmasked,618 cpgIslandSuper,615 genscan,222 transMapEnsemblV5,816 transMapEstV5,785 transMapRefSeqV5,785 transMapRnaV5,785 transMapV5,891 biological uniprot,320 biology genscan,200 birds augustusGene,203 birney ensGene,172 black gap,73 gap,112 blast uniprot,949 uniprot,1084 uniprot,1115 blast-like refSeqComposite,1741 xenoRefGene,309 blastz chainHg38,928 chainHg38,1115 chainNetHg38,931 chainNetHg38,1118 chainNetTarSyr2,931 chainNetTarSyr2,1118 chainTarSyr2,928 chainTarSyr2,1115 netHg38,928 netHg38,1115 netTarSyr2,928 netTarSyr2,1115 transMapEnsemblV5,78 transMapEnsemblV5,197 transMapEstV5,47 transMapEstV5,166 transMapRefSeqV5,47 transMapRefSeqV5,166 transMapRnaV5,47 transMapRnaV5,166 transMapV5,48 transMapV5,145 transMapV5,272 blat refSeqComposite,1243 refSeqComposite,1739 transMapEnsemblV5,168 transMapEstV5,137 transMapRefSeqV5,137 transMapRnaV5,137 transMapV5,127 transMapV5,151 transMapV5,158 transMapV5,243 xenoRefGene,231 blat--the xenoRefGene,308 blocks chainHg38,44 chainHg38,655 chainHg38,676 chainNetHg38,47 chainNetHg38,658 chainNetHg38,679 chainNetTarSyr2,47 chainNetTarSyr2,658 chainNetTarSyr2,679 chainTarSyr2,44 chainTarSyr2,655 chainTarSyr2,676 gold,109 gold,136 netHg38,44 netHg38,655 netHg38,676 netTarSyr2,44 netTarSyr2,655 netTarSyr2,676 blog cpgIslandExt,553 cpgIslandExtUnmasked,556 cpgIslandSuper,553 ensGene,131 blue unipAliSwissprot,11 unipAliSwissprot,15 uniprot,507 uniprot,583 bond uniprot,473 bonds unipDisulfBond,2 unipDisulfBond,5 uniprot,334 uniprot,336 both chainHg38,97 chainHg38,119 chainHg38,174 chainHg38,906 chainNetHg38,100 chainNetHg38,122 chainNetHg38,177 chainNetHg38,909 chainNetTarSyr2,100 chainNetTarSyr2,122 chainNetTarSyr2,177 chainNetTarSyr2,909 chainTarSyr2,97 chainTarSyr2,119 chainTarSyr2,174 chainTarSyr2,906 netHg38,97 netHg38,119 netHg38,174 netHg38,906 netTarSyr2,97 netTarSyr2,119 netTarSyr2,174 netTarSyr2,906 transMapEnsemblV5,515 transMapEstV5,484 transMapRefSeqV5,484 transMapRnaV5,484 transMapV5,590 uniprot,675 uniprot,1616 xenoRefGene,128 xenoRefGene,199 bothgap chainHg38,757 chainNetHg38,760 chainNetTarSyr2,760 chainTarSyr2,757 netHg38,757 netTarSyr2,757 boundaries gold,84 box chainHg38,382 chainHg38,464 chainNetHg38,385 chainNetHg38,467 chainNetTarSyr2,385 chainNetTarSyr2,467 chainTarSyr2,382 chainTarSyr2,464 gap,113 netHg38,382 netHg38,464 netTarSyr2,382 netTarSyr2,464 xenoRefGene,218 boxes chainHg38,125 chainHg38,135 chainHg38,453 chainNetHg38,128 chainNetHg38,138 chainNetHg38,456 chainNetTarSyr2,128 chainNetTarSyr2,138 chainNetTarSyr2,456 chainTarSyr2,125 chainTarSyr2,135 chainTarSyr2,453 gap,74 nestedRepeats,126 netHg38,125 netHg38,135 netHg38,453 netTarSyr2,125 netTarSyr2,135 netTarSyr2,453 refSeqComposite,167 bp cpgIslandExt,272 cpgIslandExtUnmasked,275 cpgIslandSuper,272 refSeqComposite,950 branch transMapEnsemblV5,222 transMapEstV5,191 transMapRefSeqV5,191 transMapRnaV5,191 transMapV5,297 branch-point augustusGene,55 brejov transMapEnsemblV5,721 transMapEstV5,690 transMapRefSeqV5,690 transMapRnaV5,690 transMapV5,796 brian uniprot,1959 bridge gold,134 bridged gap,102 briefly uniprot,778 brown gold,94 gold,108 refSeqComposite,1757 xenoRefGene,325 browser chainHg38,986 chainNetHg38,989 chainNetTarSyr2,989 chainTarSyr2,986 cpgIslandExt,522 cpgIslandExtUnmasked,525 cpgIslandSuper,522 ensGene,67 nestedRepeats,243 netHg38,986 netTarSyr2,986 refSeqComposite,1129 refSeqComposite,1191 refSeqComposite,1319 refSeqComposite,1456 transMapEnsemblV5,37 transMapEnsemblV5,166 transMapEnsemblV5,536 transMapEstV5,35 transMapEstV5,135 transMapEstV5,505 transMapRefSeqV5,35 transMapRefSeqV5,135 transMapRefSeqV5,505 transMapRnaV5,35 transMapRnaV5,135 transMapRnaV5,505 transMapV5,34 transMapV5,241 transMapV5,611 ucscToINSDC,19 ucscToRefSeq,14 uniprot,1544 uniprot,1721 browsing uniprot,1662 build refSeqComposite,301 uniprot,1552 builds transMapEnsemblV5,54 built augustusGene,51 augustusGene,67 burge genscan,22 genscan,146 genscan,166 genscan,173 genscan,180 genscan,207 but chainHg38,555 chainNetHg38,558 chainNetTarSyr2,558 chainTarSyr2,555 netHg38,555 netTarSyr2,555 refSeqComposite,428 refSeqComposite,903 refSeqComposite,1036 refSeqComposite,1457 rmsk,311 uniprot,638 uniprot,1047 button chainHg38,353 chainNetHg38,356 chainNetTarSyr2,356 chainTarSyr2,353 netHg38,353 netTarSyr2,353 by augustusGene,147 augustusGene,266 augustusGene,282 chainHg38,112 chainHg38,128 chainHg38,323 chainHg38,386 chainHg38,423 chainHg38,441 chainHg38,823 chainHg38,935 chainHg38,954 chainHg38,974 chainHg38,998 chainHg38,1019 chainNetHg38,115 chainNetHg38,131 chainNetHg38,326 chainNetHg38,389 chainNetHg38,426 chainNetHg38,444 chainNetHg38,826 chainNetHg38,938 chainNetHg38,957 chainNetHg38,977 chainNetHg38,1001 chainNetHg38,1022 chainNetTarSyr2,115 chainNetTarSyr2,131 chainNetTarSyr2,326 chainNetTarSyr2,389 chainNetTarSyr2,426 chainNetTarSyr2,444 chainNetTarSyr2,826 chainNetTarSyr2,938 chainNetTarSyr2,957 chainNetTarSyr2,977 chainNetTarSyr2,1001 chainNetTarSyr2,1022 chainTarSyr2,112 chainTarSyr2,128 chainTarSyr2,323 chainTarSyr2,386 chainTarSyr2,423 chainTarSyr2,441 chainTarSyr2,823 chainTarSyr2,935 chainTarSyr2,954 chainTarSyr2,974 chainTarSyr2,998 chainTarSyr2,1019 cpgIslandExt,49 cpgIslandExt,194 cpgIslandExt,229 cpgIslandExt,406 cpgIslandExt,596 cpgIslandExtUnmasked,52 cpgIslandExtUnmasked,197 cpgIslandExtUnmasked,232 cpgIslandExtUnmasked,409 cpgIslandExtUnmasked,599 cpgIslandSuper,49 cpgIslandSuper,194 cpgIslandSuper,229 cpgIslandSuper,406 cpgIslandSuper,596 ensGene,15 gap,95 gc5BaseBw,81 genscan,20 genscan,88 genscan,121 gold,87 microsat,110 nestedRepeats,8 nestedRepeats,91 nestedRepeats,129 netHg38,112 netHg38,128 netHg38,323 netHg38,386 netHg38,423 netHg38,441 netHg38,823 netHg38,935 netHg38,954 netHg38,974 netHg38,998 netHg38,1019 netTarSyr2,112 netTarSyr2,128 netTarSyr2,323 netTarSyr2,386 netTarSyr2,423 netTarSyr2,441 netTarSyr2,823 netTarSyr2,935 netTarSyr2,954 netTarSyr2,974 netTarSyr2,998 netTarSyr2,1019 refSeqComposite,40 refSeqComposite,51 refSeqComposite,71 refSeqComposite,208 refSeqComposite,373 refSeqComposite,386 refSeqComposite,448 refSeqComposite,563 refSeqComposite,632 refSeqComposite,645 refSeqComposite,649 refSeqComposite,693 refSeqComposite,769 refSeqComposite,774 refSeqComposite,851 refSeqComposite,869 refSeqComposite,1208 refSeqComposite,1726 refSeqComposite,1731 rmsk,4 rmsk,14 rmsk,50 simpleRepeat,6 simpleRepeat,22 simpleRepeat,70 transMapEnsemblV5,23 transMapEnsemblV5,231 transMapEnsemblV5,401 transMapEnsemblV5,684 transMapEnsemblV5,702 transMapEnsemblV5,708 transMapEnsemblV5,746 transMapEstV5,21 transMapEstV5,200 transMapEstV5,370 transMapEstV5,653 transMapEstV5,671 transMapEstV5,677 transMapEstV5,715 transMapRefSeqV5,21 transMapRefSeqV5,200 transMapRefSeqV5,370 transMapRefSeqV5,653 transMapRefSeqV5,671 transMapRefSeqV5,677 transMapRefSeqV5,715 transMapRnaV5,21 transMapRnaV5,200 transMapRnaV5,370 transMapRnaV5,653 transMapRnaV5,671 transMapRnaV5,677 transMapRnaV5,715 transMapV5,20 transMapV5,306 transMapV5,476 transMapV5,759 transMapV5,777 transMapV5,783 transMapV5,821 ucscToINSDC,50 ucscToRefSeq,44 uniprot,39 uniprot,49 uniprot,224 uniprot,713 uniprot,720 uniprot,818 uniprot,987 uniprot,995 uniprot,1015 uniprot,1028 uniprot,1045 uniprot,1538 uniprot,1764 uniprot,1943 windowmaskerSdust,6 windowmaskerSdust,20 xenoRefGene,104 xenoRefGene,109 xenoRefGene,173 xenoRefGene,191 xenoRefGene,197 xenoRefGene,295 xenoRefGene,300 c cpgIslandExt,44 cpgIslandExt,389 cpgIslandExtUnmasked,47 cpgIslandExtUnmasked,392 cpgIslandSuper,44 cpgIslandSuper,389 gc5BaseBw,23 genscan,181 genscan,208 refSeqComposite,921 refSeqComposite,962 refSeqComposite,989 refSeqComposite,1048 refSeqComposite,1075 refSeqComposite,1087 transMapEnsemblV5,731 transMapEnsemblV5,737 transMapEstV5,700 transMapEstV5,706 transMapRefSeqV5,700 transMapRefSeqV5,706 transMapRnaV5,700 transMapRnaV5,706 transMapV5,806 transMapV5,812 windowmaskerSdust,30 c-114100-125-31 chainHg38,685 chainNetHg38,688 netHg38,685 c-17298-170-29 chainNetTarSyr2,688 chainTarSyr2,685 netTarSyr2,685 caenorhabditis augustusGene,212 calculated cpgIslandExt,369 cpgIslandExtUnmasked,372 cpgIslandSuper,369 calculation cpgIslandExt,399 cpgIslandExtUnmasked,402 cpgIslandSuper,399 california chainHg38,970 chainHg38,1016 chainNetHg38,973 chainNetHg38,1019 chainNetTarSyr2,973 chainNetTarSyr2,1019 chainTarSyr2,970 chainTarSyr2,1016 netHg38,970 netHg38,1016 netTarSyr2,970 netTarSyr2,1016 cameron ensGene,174 can augustusGene,98 chainHg38,92 chainHg38,109 chainNetHg38,95 chainNetHg38,112 chainNetTarSyr2,95 chainNetTarSyr2,112 chainTarSyr2,92 chainTarSyr2,109 cpgIslandExt,512 cpgIslandExt,530 cpgIslandExt,560 cpgIslandExt,571 cpgIslandExtUnmasked,515 cpgIslandExtUnmasked,533 cpgIslandExtUnmasked,563 cpgIslandExtUnmasked,574 cpgIslandSuper,512 cpgIslandSuper,530 cpgIslandSuper,560 cpgIslandSuper,571 ensGene,60 ensGene,103 ensGene,137 netHg38,92 netHg38,109 netTarSyr2,92 netTarSyr2,109 refSeqComposite,288 refSeqComposite,732 refSeqComposite,1110 refSeqComposite,1198 refSeqComposite,1303 refSeqComposite,1310 refSeqComposite,1325 refSeqComposite,1358 refSeqComposite,1398 refSeqComposite,1458 refSeqComposite,1466 refSeqComposite,1489 refSeqComposite,1509 refSeqComposite,1517 refSeqComposite,1570 refSeqComposite,1590 refSeqComposite,1613 refSeqComposite,1683 refSeqComposite,1708 rmsk,116 simpleRepeat,35 transMapEnsemblV5,529 transMapEnsemblV5,558 transMapEnsemblV5,613 transMapEnsemblV5,621 transMapEnsemblV5,644 transMapEnsemblV5,650 transMapEstV5,498 transMapEstV5,527 transMapEstV5,582 transMapEstV5,590 transMapEstV5,613 transMapEstV5,619 transMapRefSeqV5,498 transMapRefSeqV5,527 transMapRefSeqV5,582 transMapRefSeqV5,590 transMapRefSeqV5,613 transMapRefSeqV5,619 transMapRnaV5,498 transMapRnaV5,527 transMapRnaV5,582 transMapRnaV5,590 transMapRnaV5,613 transMapRnaV5,619 transMapV5,604 transMapV5,633 transMapV5,688 transMapV5,696 transMapV5,719 transMapV5,725 uniprot,180 uniprot,656 uniprot,1064 uniprot,1093 uniprot,1104 uniprot,1326 uniprot,1555 uniprot,1693 uniprot,1714 uniprot,1739 uniprot,1749 uniprot,1758 uniprot,1769 uniprot,1792 uniprot,1798 uniprot,1881 xenoRefGene,89 cannot uniprot,1269 cases chainHg38,196 chainHg38,410 chainNetHg38,199 chainNetHg38,413 chainNetTarSyr2,199 chainNetTarSyr2,413 chainTarSyr2,196 chainTarSyr2,410 netHg38,196 netHg38,410 netTarSyr2,196 netTarSyr2,410 uniprot,757 uniprot,1183 uniprot,1452 cat uniprot,1936 categorized chainHg38,511 chainNetHg38,514 chainNetTarSyr2,514 chainTarSyr2,511 netHg38,511 netTarSyr2,511 cauldron chainHg38,1068 chainNetHg38,1071 chainNetTarSyr2,1071 chainTarSyr2,1068 netHg38,1068 netTarSyr2,1068 cause chainHg38,493 chainNetHg38,496 chainNetTarSyr2,496 chainTarSyr2,493 netHg38,493 netTarSyr2,493 caused chainHg38,111 chainNetHg38,114 chainNetTarSyr2,114 chainTarSyr2,111 netHg38,111 netTarSyr2,111 cb transMapEnsemblV5,797 transMapEstV5,766 transMapRefSeqV5,766 transMapRnaV5,766 transMapV5,872 cdna augustusGene,299 refSeqComposite,268 refSeqComposite,364 transMapEnsemblV5,394 transMapEnsemblV5,690 transMapEnsemblV5,773 transMapEstV5,363 transMapEstV5,659 transMapEstV5,742 transMapRefSeqV5,363 transMapRefSeqV5,659 transMapRefSeqV5,742 transMapRnaV5,363 transMapRnaV5,659 transMapRnaV5,742 transMapV5,15 transMapV5,469 transMapV5,765 transMapV5,848 cdnas transMapEnsemblV5,126 transMapEstV5,95 transMapRefSeqV5,95 transMapRnaV5,95 transMapV5,201 cell uniprot,563 cerevisiae augustusGene,222 certain nestedRepeats,294 rmsk,301 cg cpgIslandExt,243 cpgIslandExt,281 cpgIslandExt,339 cpgIslandExtUnmasked,246 cpgIslandExtUnmasked,284 cpgIslandExtUnmasked,342 cpgIslandSuper,243 cpgIslandSuper,281 cpgIslandSuper,339 chain chainHg38,2 chainHg38,27 chainHg38,57 chainHg38,60 chainHg38,122 chainHg38,278 chainHg38,321 chainHg38,416 chainHg38,471 chainHg38,575 chainHg38,783 chainHg38,826 chainHg38,837 chainHg38,845 chainHg38,850 chainHg38,873 chainHg38,882 chainNetHg38,2 chainNetHg38,9 chainNetHg38,30 chainNetHg38,60 chainNetHg38,63 chainNetHg38,125 chainNetHg38,281 chainNetHg38,324 chainNetHg38,419 chainNetHg38,474 chainNetHg38,578 chainNetHg38,786 chainNetHg38,829 chainNetHg38,840 chainNetHg38,848 chainNetHg38,853 chainNetHg38,876 chainNetHg38,885 chainNetHg38Viewchain,1 chainNetHg38Viewchain,7 chainNetHg38Viewnet,7 chainNetTarSyr2,2 chainNetTarSyr2,9 chainNetTarSyr2,30 chainNetTarSyr2,60 chainNetTarSyr2,63 chainNetTarSyr2,125 chainNetTarSyr2,281 chainNetTarSyr2,324 chainNetTarSyr2,419 chainNetTarSyr2,474 chainNetTarSyr2,578 chainNetTarSyr2,786 chainNetTarSyr2,829 chainNetTarSyr2,840 chainNetTarSyr2,848 chainNetTarSyr2,853 chainNetTarSyr2,876 chainNetTarSyr2,885 chainNetTarSyr2Viewchain,1 chainNetTarSyr2Viewchain,7 chainNetTarSyr2Viewnet,7 chainTarSyr2,2 chainTarSyr2,27 chainTarSyr2,57 chainTarSyr2,60 chainTarSyr2,122 chainTarSyr2,278 chainTarSyr2,321 chainTarSyr2,416 chainTarSyr2,471 chainTarSyr2,575 chainTarSyr2,783 chainTarSyr2,826 chainTarSyr2,837 chainTarSyr2,845 chainTarSyr2,850 chainTarSyr2,873 chainTarSyr2,882 netHg38,27 netHg38,57 netHg38,60 netHg38,122 netHg38,278 netHg38,321 netHg38,416 netHg38,471 netHg38,575 netHg38,783 netHg38,826 netHg38,837 netHg38,845 netHg38,850 netHg38,873 netHg38,882 netTarSyr2,27 netTarSyr2,57 netTarSyr2,60 netTarSyr2,122 netTarSyr2,278 netTarSyr2,321 netTarSyr2,416 netTarSyr2,471 netTarSyr2,575 netTarSyr2,783 netTarSyr2,826 netTarSyr2,837 netTarSyr2,845 netTarSyr2,850 netTarSyr2,873 netTarSyr2,882 transMapV5,139 uniprot,290 chained chainHg38,8 chainTarSyr2,8 chainnet chainHg38,800 chainHg38,1005 chainNetHg38,803 chainNetHg38,1008 chainNetTarSyr2,803 chainNetTarSyr2,1008 chainTarSyr2,800 chainTarSyr2,1005 netHg38,800 netHg38,1005 netTarSyr2,800 netTarSyr2,1005 chains chainHg38,199 chainHg38,212 chainHg38,223 chainHg38,326 chainHg38,365 chainHg38,398 chainHg38,403 chainHg38,425 chainHg38,437 chainHg38,444 chainHg38,501 chainHg38,673 chainHg38,688 chainHg38,702 chainHg38,771 chainHg38,792 chainHg38,807 chainHg38,867 chainHg38,898 chainHg38,993 chainNetHg38,202 chainNetHg38,215 chainNetHg38,226 chainNetHg38,329 chainNetHg38,368 chainNetHg38,401 chainNetHg38,406 chainNetHg38,428 chainNetHg38,440 chainNetHg38,447 chainNetHg38,504 chainNetHg38,676 chainNetHg38,691 chainNetHg38,705 chainNetHg38,774 chainNetHg38,795 chainNetHg38,810 chainNetHg38,870 chainNetHg38,901 chainNetHg38,996 chainNetTarSyr2,202 chainNetTarSyr2,215 chainNetTarSyr2,226 chainNetTarSyr2,329 chainNetTarSyr2,368 chainNetTarSyr2,401 chainNetTarSyr2,406 chainNetTarSyr2,428 chainNetTarSyr2,440 chainNetTarSyr2,447 chainNetTarSyr2,504 chainNetTarSyr2,676 chainNetTarSyr2,691 chainNetTarSyr2,705 chainNetTarSyr2,774 chainNetTarSyr2,795 chainNetTarSyr2,810 chainNetTarSyr2,870 chainNetTarSyr2,901 chainNetTarSyr2,996 chainTarSyr2,199 chainTarSyr2,212 chainTarSyr2,223 chainTarSyr2,326 chainTarSyr2,365 chainTarSyr2,398 chainTarSyr2,403 chainTarSyr2,425 chainTarSyr2,437 chainTarSyr2,444 chainTarSyr2,501 chainTarSyr2,673 chainTarSyr2,688 chainTarSyr2,702 chainTarSyr2,771 chainTarSyr2,792 chainTarSyr2,807 chainTarSyr2,867 chainTarSyr2,898 chainTarSyr2,993 netHg38,199 netHg38,212 netHg38,223 netHg38,326 netHg38,365 netHg38,398 netHg38,403 netHg38,425 netHg38,437 netHg38,444 netHg38,501 netHg38,673 netHg38,688 netHg38,702 netHg38,771 netHg38,792 netHg38,807 netHg38,867 netHg38,898 netHg38,993 netTarSyr2,199 netTarSyr2,212 netTarSyr2,223 netTarSyr2,326 netTarSyr2,365 netTarSyr2,398 netTarSyr2,403 netTarSyr2,425 netTarSyr2,437 netTarSyr2,444 netTarSyr2,501 netTarSyr2,673 netTarSyr2,688 netTarSyr2,702 netTarSyr2,771 netTarSyr2,792 netTarSyr2,807 netTarSyr2,867 netTarSyr2,898 netTarSyr2,993 transMapEnsemblV5,80 transMapEnsemblV5,199 transMapEnsemblV5,214 transMapEnsemblV5,260 transMapEnsemblV5,285 transMapEnsemblV5,333 transMapEnsemblV5,516 transMapEstV5,49 transMapEstV5,168 transMapEstV5,183 transMapEstV5,229 transMapEstV5,254 transMapEstV5,302 transMapEstV5,485 transMapRefSeqV5,49 transMapRefSeqV5,168 transMapRefSeqV5,183 transMapRefSeqV5,229 transMapRefSeqV5,254 transMapRefSeqV5,302 transMapRefSeqV5,485 transMapRnaV5,49 transMapRnaV5,168 transMapRnaV5,183 transMapRnaV5,229 transMapRnaV5,254 transMapRnaV5,302 transMapRnaV5,485 transMapV5,50 transMapV5,88 transMapV5,274 transMapV5,289 transMapV5,335 transMapV5,360 transMapV5,408 transMapV5,591 unipChain,1 unipChain,7 uniprot,288 change cpgIslandExt,210 cpgIslandExtUnmasked,213 cpgIslandSuper,210 refSeqComposite,913 refSeqComposite,927 changed rmsk,285 uniprot,1382 check chainHg38,348 chainNetHg38,351 chainNetTarSyr2,351 chainTarSyr2,348 netHg38,348 netTarSyr2,348 check-box refSeqComposite,737 checkbox uniprot,231 chen ensGene,176 chiaromonte chainHg38,1038 chainNetHg38,1041 chainNetTarSyr2,1041 chainTarSyr2,1038 netHg38,1038 netTarSyr2,1038 chicken augustusGene,204 augustusGene,262 chmod uniprot,1921 choose augustusGene,171 cpgIslandExt,581 cpgIslandExtUnmasked,584 cpgIslandSuper,581 uniprot,657 chosen refSeqComposite,542 chr16 refSeqComposite,1563 chr4 chainHg38,380 chainNetHg38,383 chainNetTarSyr2,383 chainTarSyr2,380 netHg38,380 netTarSyr2,380 chr6 transMapEnsemblV5,673 transMapEstV5,642 transMapRefSeqV5,642 transMapRnaV5,642 transMapV5,748 uniprot,1820 chris genscan,21 genscan,172 uniprot,1954 chrm gold,160 chrom refSeqComposite,1562 transMapEnsemblV5,672 transMapEstV5,641 transMapRefSeqV5,641 transMapRnaV5,641 transMapV5,747 uniprot,1819 chromosome chainHg38,253 chainHg38,335 chainHg38,360 chainHg38,368 chainHg38,378 chainHg38,387 chainHg38,534 chainHg38,549 chainHg38,565 chainHg38,635 chainHg38,642 chainNetHg38,256 chainNetHg38,338 chainNetHg38,363 chainNetHg38,371 chainNetHg38,381 chainNetHg38,390 chainNetHg38,537 chainNetHg38,552 chainNetHg38,568 chainNetHg38,638 chainNetHg38,645 chainNetTarSyr2,256 chainNetTarSyr2,338 chainNetTarSyr2,363 chainNetTarSyr2,371 chainNetTarSyr2,381 chainNetTarSyr2,390 chainNetTarSyr2,537 chainNetTarSyr2,552 chainNetTarSyr2,568 chainNetTarSyr2,638 chainNetTarSyr2,645 chainTarSyr2,253 chainTarSyr2,335 chainTarSyr2,360 chainTarSyr2,368 chainTarSyr2,378 chainTarSyr2,387 chainTarSyr2,534 chainTarSyr2,549 chainTarSyr2,565 chainTarSyr2,635 chainTarSyr2,642 cytoBandIdeo,1 netHg38,253 netHg38,335 netHg38,360 netHg38,368 netHg38,378 netHg38,387 netHg38,534 netHg38,549 netHg38,565 netHg38,635 netHg38,642 netTarSyr2,253 netTarSyr2,335 netTarSyr2,360 netTarSyr2,368 netTarSyr2,378 netTarSyr2,387 netTarSyr2,534 netTarSyr2,549 netTarSyr2,565 netTarSyr2,635 netTarSyr2,642 ucscToINSDC,20 ucscToRefSeq,15 uniprot,1416 chromosome-based chainHg38,328 chainNetHg38,331 chainNetTarSyr2,331 chainTarSyr2,328 netHg38,328 netTarSyr2,328 circle rmsk,202 cited cpgIslandExt,374 cpgIslandExtUnmasked,377 cpgIslandSuper,374 cl transMapEnsemblV5,729 transMapEstV5,698 transMapRefSeqV5,698 transMapRnaV5,698 transMapV5,804 clark ensGene,178 class rmsk,199 rmsk,253 classes rmsk,150 classification rmsk,266 rmsk,282 clawson gc5BaseBw,83 ucscToINSDC,52 ucscToRefSeq,46 cleaved uniprot,249 click chainHg38,461 chainHg38,475 chainNetHg38,464 chainNetHg38,478 chainNetTarSyr2,464 chainNetTarSyr2,478 chainTarSyr2,461 chainTarSyr2,475 gc5BaseBw,56 netHg38,461 netHg38,475 netTarSyr2,461 netTarSyr2,475 refSeqComposite,755 refSeqComposite,777 transMapEnsemblV5,137 transMapEnsemblV5,151 transMapEstV5,106 transMapEstV5,120 transMapRefSeqV5,106 transMapRefSeqV5,120 transMapRnaV5,106 transMapRnaV5,120 transMapV5,212 transMapV5,226 uniprot,229 uniprot,481 uniprot,1673 xenoRefGene,112 xenoRefGene,216 clicking uniprot,1633 clinical refSeqComposite,589 clipped nestedRepeats,224 closer transMapEnsemblV5,68 transMapEstV5,37 transMapRefSeqV5,37 transMapRnaV5,37 transMapV5,36 closest augustusGene,241 clusters refSeqComposite,413 cm refSeqComposite,1768 xenoRefGene,336 code refSeqComposite,1523 transMapEnsemblV5,627 transMapEnsemblV5,641 transMapEstV5,596 transMapEstV5,610 transMapRefSeqV5,596 transMapRefSeqV5,610 transMapRnaV5,596 transMapRnaV5,610 transMapV5,702 transMapV5,716 uniprot,1546 uniprot,1775 uniprot,1789 windowmaskerSdust,34 coding refSeqComposite,1088 simpleRepeat,38 uniprot,1102 uniprot,1133 xenoRefGene,214 codon genscan,100 genscan,122 refSeqComposite,724 refSeqComposite,818 refSeqComposite,825 refSeqComposite,840 refSeqComposite,870 transMapEnsemblV5,115 transMapEstV5,84 transMapRefSeqV5,84 transMapRnaV5,84 transMapV5,190 xenoRefGene,140 xenoRefGene,147 xenoRefGene,162 xenoRefGene,192 codons genscan,89 genscan,93 refSeqComposite,845 refSeqComposite,852 xenoRefGene,167 xenoRefGene,174 cognate transMapEnsemblV5,181 transMapEstV5,150 transMapRefSeqV5,150 transMapRnaV5,150 transMapV5,256 coiled-coil uniprot,367 collaboration ucscToINSDC,9 ucscToINSDC,31 collaborator refSeqComposite,651 collaborators refSeqComposite,695 collapsed nestedRepeats,173 collection refSeqComposite,33 xenoRefGene,35 color chainHg38,356 chainNetHg38,359 chainNetTarSyr2,359 chainTarSyr2,356 genscan,86 genscan,96 netHg38,356 netTarSyr2,356 refSeqComposite,611 refSeqComposite,634 refSeqComposite,849 rmsk,207 xenoRefGene,60 xenoRefGene,171 coloration gold,95 colored chainHg38,331 chainNetHg38,334 chainNetTarSyr2,334 chainTarSyr2,331 netHg38,331 netTarSyr2,331 transMapEnsemblV5,147 transMapEstV5,116 transMapRefSeqV5,116 transMapRnaV5,116 transMapV5,222 uniprot,160 uniprot,176 coloring chainHg38,347 chainNetHg38,350 chainNetTarSyr2,350 chainTarSyr2,347 genscan,116 netHg38,347 netTarSyr2,347 refSeqComposite,819 refSeqComposite,826 refSeqComposite,864 transMapEnsemblV5,116 transMapEstV5,85 transMapRefSeqV5,85 transMapRnaV5,85 transMapV5,191 xenoRefGene,141 xenoRefGene,148 xenoRefGene,186 colors refSeqComposite,841 xenoRefGene,83 xenoRefGene,163 column nestedRepeats,107 refSeqComposite,1433 refSeqComposite,1444 columns transMapEnsemblV5,556 transMapEstV5,525 transMapRefSeqV5,525 transMapRnaV5,525 transMapV5,631 combined rmsk,232 command cpgIslandExt,409 cpgIslandExt,503 cpgIslandExtUnmasked,412 cpgIslandExtUnmasked,506 cpgIslandSuper,409 cpgIslandSuper,503 refSeqComposite,1554 refSeqComposite,1618 transMapEnsemblV5,258 transMapEstV5,227 transMapRefSeqV5,227 transMapRnaV5,227 transMapV5,333 uniprot,1871 uniprot,1875 commands uniprot,1902 comment uniprot,260 uniprot,282 uniprot,531 uniprot,615 common cpgIslandExt,30 cpgIslandExtUnmasked,33 cpgIslandSuper,30 comparative chainHg38,10 chainNetHg38,13 chainNetHg38Viewchain,11 chainNetHg38Viewnet,11 chainNetTarSyr2,13 chainNetTarSyr2Viewchain,11 chainNetTarSyr2Viewnet,11 chainTarSyr2,10 netHg38,10 netTarSyr2,10 transMapEnsemblV5,747 transMapEnsemblV5,802 transMapEstV5,716 transMapEstV5,771 transMapRefSeqV5,716 transMapRefSeqV5,771 transMapRnaV5,716 transMapRnaV5,771 transMapV5,822 transMapV5,877 compare refSeqComposite,835 transMapEnsemblV5,125 transMapEstV5,94 transMapRefSeqV5,94 transMapRnaV5,94 transMapV5,200 xenoRefGene,157 compared transMapV5,155 comparison genscan,109 uniprot,1260 compiled refSeqComposite,1519 transMapEnsemblV5,623 transMapEstV5,592 transMapRefSeqV5,592 transMapRnaV5,592 transMapV5,698 uniprot,1771 complete genscan,213 completely refSeqComposite,817 uniprot,1464 xenoRefGene,139 complex chainHg38,167 chainNetHg38,170 chainNetTarSyr2,170 chainTarSyr2,167 netHg38,167 netTarSyr2,167 complexity nestedRepeats,40 rmsk,30 rmsk,182 component gold,137 composed uniprot,1396 composite refSeqComposite,16 refSeqComposite,150 compositional genscan,41 uniprot,399 comput transMapEnsemblV5,815 transMapEstV5,784 transMapRefSeqV5,784 transMapRnaV5,784 transMapV5,890 computational genscan,196 uniprot,51 computed transMapEnsemblV5,230 transMapEstV5,199 transMapRefSeqV5,199 transMapRnaV5,199 transMapV5,305 comstock transMapEnsemblV5,728 transMapEstV5,697 transMapRefSeqV5,697 transMapRnaV5,697 transMapV5,803 concerning refSeqComposite,127 conditional augustusGene,118 configuration chainHg38,320 chainNetHg38,323 chainNetTarSyr2,323 chainTarSyr2,320 gc5BaseBw,60 gc5BaseBw,69 genscan,64 genscan,84 nestedRepeats,114 netHg38,320 netTarSyr2,320 refSeqComposite,145 rmsk,138 transMapEnsemblV5,96 transMapEstV5,65 transMapRefSeqV5,65 transMapRnaV5,65 transMapV5,171 uniprot,235 uniprot,449 uniprot,650 uniprot,1755 xenoRefGene,48 configured gc5BaseBw,42 refSeqComposite,734 transMapEnsemblV5,112 transMapEstV5,81 transMapRefSeqV5,81 transMapRnaV5,81 transMapV5,187 xenoRefGene,91 conflicts unipConflict,2 unipConflict,5 uniprot,373 connect uniprot,1677 conservation transMapEnsemblV5,234 transMapEstV5,203 transMapRefSeqV5,203 transMapRnaV5,203 transMapV5,309 consistency uniprot,402 consortium uniprot,1986 constructed cpgIslandExt,322 cpgIslandExt,495 cpgIslandExtUnmasked,325 cpgIslandExtUnmasked,498 cpgIslandSuper,322 cpgIslandSuper,495 refSeqComposite,1222 construction cpgIslandExt,311 cpgIslandExtUnmasked,314 cpgIslandSuper,311 contact uniprot,686 uniprot,1440 contain transMapV5,14 uniprot,1163 contained chainHg38,899 chainNetHg38,902 chainNetTarSyr2,902 chainTarSyr2,899 netHg38,899 netTarSyr2,899 refSeqComposite,1146 containing refSeqComposite,1663 transMapEnsemblV5,551 transMapEstV5,520 transMapRefSeqV5,520 transMapRnaV5,520 transMapV5,626 contains gap,119 refSeqComposite,153 refSeqComposite,876 transMapEnsemblV5,17 transMapEstV5,15 transMapRefSeqV5,16 transMapRnaV5,16 xenoRefGene,144 content augustusGene,71 cpgIslandExt,263 cpgIslandExtUnmasked,266 cpgIslandSuper,263 gc5BaseBw,31 contig gap,126 gold,83 contigs gap,86 gap,129 gold,75 gold,100 gold,117 controls cpgIslandExt,217 cpgIslandExtUnmasked,220 cpgIslandSuper,217 refSeqComposite,738 xenoRefGene,94 convenience uniprot,404 conventions chainHg38,318 chainNetHg38,321 chainNetTarSyr2,321 chainTarSyr2,318 genscan,62 genscan,70 nestedRepeats,112 netHg38,318 netTarSyr2,318 refSeqComposite,143 refSeqComposite,455 refSeqComposite,605 rmsk,136 transMapEnsemblV5,94 transMapEnsemblV5,102 transMapEstV5,63 transMapEstV5,71 transMapRefSeqV5,63 transMapRefSeqV5,71 transMapRnaV5,63 transMapRnaV5,71 transMapV5,169 transMapV5,177 uniprot,447 xenoRefGene,46 xenoRefGene,54 converted chainHg38,612 chainNetHg38,615 chainNetTarSyr2,615 chainTarSyr2,612 netHg38,612 netTarSyr2,612 refSeqComposite,1178 refSeqComposite,1593 uniprot,1477 uniprot,1760 coordinates refSeqComposite,38 refSeqComposite,69 uniprot,29 uniprot,643 uniprot,1848 uniprot,1855 uniprot,1886 uniprot,1892 copies microsat,80 copy uniprot,419 correct uniprot,962 uniprot,1222 corrections refSeqComposite,122 corresponding transMapEnsemblV5,261 transMapEstV5,230 transMapRefSeqV5,230 transMapRnaV5,230 transMapV5,336 could refSeqComposite,973 refSeqComposite,1550 count cpgIslandExt,334 cpgIslandExt,357 cpgIslandExtUnmasked,337 cpgIslandExtUnmasked,360 cpgIslandSuper,334 cpgIslandSuper,357 gap,132 counts gold,144 coverage uniprot,1485 covered chainHg38,822 chainNetHg38,825 chainNetTarSyr2,825 chainTarSyr2,822 gap,26 gold,28 netHg38,822 netTarSyr2,822 cow transMapEnsemblV5,454 transMapEstV5,423 transMapRefSeqV5,423 transMapRnaV5,423 transMapV5,529 cox ensGene,180 cpg cpgIslandExt,1 cpgIslandExt,3 cpgIslandExt,15 cpgIslandExt,26 cpgIslandExt,55 cpgIslandExt,147 cpgIslandExt,176 cpgIslandExt,225 cpgIslandExt,316 cpgIslandExt,319 cpgIslandExt,333 cpgIslandExt,346 cpgIslandExt,351 cpgIslandExt,356 cpgIslandExt,367 cpgIslandExt,382 cpgIslandExt,385 cpgIslandExt,506 cpgIslandExt,608 cpgIslandExtUnmasked,2 cpgIslandExtUnmasked,3 cpgIslandExtUnmasked,18 cpgIslandExtUnmasked,29 cpgIslandExtUnmasked,58 cpgIslandExtUnmasked,150 cpgIslandExtUnmasked,179 cpgIslandExtUnmasked,228 cpgIslandExtUnmasked,319 cpgIslandExtUnmasked,322 cpgIslandExtUnmasked,336 cpgIslandExtUnmasked,349 cpgIslandExtUnmasked,354 cpgIslandExtUnmasked,359 cpgIslandExtUnmasked,370 cpgIslandExtUnmasked,385 cpgIslandExtUnmasked,388 cpgIslandExtUnmasked,509 cpgIslandExtUnmasked,611 cpgIslandSuper,1 cpgIslandSuper,3 cpgIslandSuper,15 cpgIslandSuper,26 cpgIslandSuper,55 cpgIslandSuper,147 cpgIslandSuper,176 cpgIslandSuper,225 cpgIslandSuper,316 cpgIslandSuper,319 cpgIslandSuper,333 cpgIslandSuper,346 cpgIslandSuper,351 cpgIslandSuper,356 cpgIslandSuper,367 cpgIslandSuper,382 cpgIslandSuper,385 cpgIslandSuper,506 cpgIslandSuper,608 cpg_lh cpgIslandExt,418 cpgIslandExt,558 cpgIslandExt,568 cpgIslandExt,580 cpgIslandExtUnmasked,421 cpgIslandExtUnmasked,561 cpgIslandExtUnmasked,571 cpgIslandExtUnmasked,583 cpgIslandSuper,418 cpgIslandSuper,558 cpgIslandSuper,568 cpgIslandSuper,580 cpg_lh.err cpgIslandExt,423 cpgIslandExtUnmasked,426 cpgIslandSuper,423 cpgisland.bed cpgIslandExt,489 cpgIslandExtUnmasked,492 cpgIslandSuper,489 cpgislandext cpgIslandExt,566 cpgIslandExtUnmasked,569 cpgIslandSuper,566 cpgs cpgIslandExt,115 cpgIslandExt,152 cpgIslandExtUnmasked,118 cpgIslandExtUnmasked,155 cpgIslandSuper,115 cpgIslandSuper,152 create refSeqComposite,311 windowmaskerSdust,48 created chainHg38,997 chainNetHg38,1000 chainNetTarSyr2,1000 chainTarSyr2,997 microsat,89 netHg38,997 netTarSyr2,997 refSeqComposite,103 refSeqComposite,1157 rmsk,13 transMapEnsemblV5,74 transMapEstV5,43 transMapRefSeqV5,43 transMapRnaV5,43 transMapV5,42 uniprot,824 uniprot,1942 creates chainHg38,647 chainNetHg38,650 chainNetTarSyr2,650 chainTarSyr2,647 netHg38,647 netTarSyr2,647 credits augustusGene,247 chainHg38,923 chainNetHg38,926 chainNetTarSyr2,926 chainTarSyr2,923 cpgIslandExt,584 cpgIslandExtUnmasked,587 cpgIslandSuper,584 ensGene,145 gc5BaseBw,71 genscan,169 microsat,104 nestedRepeats,302 netHg38,923 netTarSyr2,923 refSeqComposite,1716 rmsk,325 simpleRepeat,66 transMapEnsemblV5,679 transMapEstV5,648 transMapRefSeqV5,648 transMapRnaV5,648 transMapV5,754 ucscToINSDC,42 ucscToRefSeq,36 uniprot,1938 xenoRefGene,283 criteria cpgIslandExt,261 cpgIslandExtUnmasked,264 cpgIslandSuper,261 transMapEnsemblV5,362 transMapEstV5,331 transMapRefSeqV5,331 transMapRnaV5,331 transMapV5,437 cross-species transMapEnsemblV5,26 transMapEstV5,24 transMapRefSeqV5,24 transMapRnaV5,24 transMapV5,23 cruz chainHg38,973 chainHg38,1018 chainNetHg38,976 chainNetHg38,1021 chainNetTarSyr2,976 chainNetTarSyr2,1021 chainTarSyr2,973 chainTarSyr2,1018 netHg38,973 netHg38,1018 netTarSyr2,973 netTarSyr2,1018 cs cpgIslandExt,63 cpgIslandExt,101 cpgIslandExt,296 cpgIslandExtUnmasked,66 cpgIslandExtUnmasked,104 cpgIslandExtUnmasked,299 cpgIslandSuper,63 cpgIslandSuper,101 cpgIslandSuper,296 cuff ensGene,182 culex augustusGene,220 curated ncbiRefSeq,6 refSeqComposite,89 refSeqComposite,203 refSeqComposite,211 refSeqComposite,252 refSeqComposite,316 refSeqComposite,401 refSeqComposite,423 refSeqComposite,474 refSeqComposite,527 refSeqComposite,560 refSeqComposite,595 refSeqComposite,1418 refSeqComposite,1678 refSeqComposite,1730 refSeqComposite,1808 uniprot,35 uniprot,110 uniprot,142 xenoRefGene,299 xenoRefGene,376 curator rmsk,261 curr nestedRepeats,384 nestedRepeats,406 rmsk,407 rmsk,429 current nestedRepeats,250 uniprot,1296 uniprot,1575 uniprot,1692 uniprot,1712 currently gold,80 refSeqComposite,478 curwen ensGene,184 cutoff refSeqComposite,946 cytoplamsic uniprot,518 cytoplasmic unipLocCytopl,1 unipLocCytopl,3 uniprot,276 uniprot,284 uniprot,569 cytosine cpgIslandExt,45 cpgIslandExtUnmasked,48 cpgIslandSuper,45 gc5BaseBw,24 d augustusGene,293 chainHg38,1065 chainHg38,1109 chainNetHg38,1068 chainNetHg38,1112 chainNetTarSyr2,1068 chainNetTarSyr2,1112 chainTarSyr2,1065 chainTarSyr2,1109 cpgIslandExt,438 cpgIslandExtUnmasked,441 cpgIslandSuper,438 ensGene,171 genscan,192 netHg38,1065 netHg38,1109 netTarSyr2,1065 netTarSyr2,1109 transMapEnsemblV5,767 transMapEnsemblV5,801 transMapEstV5,736 transMapEstV5,770 transMapRefSeqV5,736 transMapRefSeqV5,770 transMapRnaV5,736 transMapRnaV5,770 transMapV5,842 transMapV5,876 d501-4 refSeqComposite,1826 xenoRefGene,394 d71-5 uniprot,2005 d756-63 refSeqComposite,1792 xenoRefGene,360 dark refSeqComposite,629 unipAliSwissprot,10 uniprot,162 uniprot,582 uniprot,587 xenoRefGene,77 data cpgIslandExt,403 cpgIslandExt,493 cpgIslandExt,504 cpgIslandExt,525 cpgIslandExtUnmasked,406 cpgIslandExtUnmasked,496 cpgIslandExtUnmasked,507 cpgIslandExtUnmasked,528 cpgIslandSuper,403 cpgIslandSuper,493 cpgIslandSuper,504 cpgIslandSuper,525 ensGene,55 ensGene,59 ensGene,70 ensGene,102 gap,98 gc5BaseBw,73 microsat,47 nestedRepeats,263 nestedRepeats,280 refSeqComposite,155 refSeqComposite,660 refSeqComposite,1161 refSeqComposite,1167 refSeqComposite,1295 refSeqComposite,1299 refSeqComposite,1321 refSeqComposite,1373 refSeqComposite,1658 refSeqComposite,1724 rmsk,126 rmsk,287 transMapEnsemblV5,521 transMapEnsemblV5,525 transMapEnsemblV5,539 transMapEnsemblV5,576 transMapEnsemblV5,580 transMapEnsemblV5,694 transMapEstV5,490 transMapEstV5,494 transMapEstV5,508 transMapEstV5,545 transMapEstV5,549 transMapEstV5,663 transMapRefSeqV5,490 transMapRefSeqV5,494 transMapRefSeqV5,508 transMapRefSeqV5,545 transMapRefSeqV5,549 transMapRefSeqV5,663 transMapRnaV5,490 transMapRnaV5,494 transMapRnaV5,508 transMapRnaV5,545 transMapRnaV5,549 transMapRnaV5,663 transMapV5,596 transMapV5,600 transMapV5,614 transMapV5,651 transMapV5,655 transMapV5,769 ucscToINSDC,34 ucscToINSDC,44 ucscToRefSeq,28 ucscToRefSeq,38 uniprot,32 uniprot,45 uniprot,892 uniprot,895 uniprot,1683 uniprot,1705 uniprot,1709 uniprot,1724 uniprot,1837 uniprot,1980 xenoRefGene,38 xenoRefGene,293 database chainHg38,989 chainNetHg38,992 chainNetTarSyr2,992 chainTarSyr2,989 ensGene,193 nestedRepeats,345 netHg38,989 netTarSyr2,989 refSeqComposite,568 refSeqComposite,1408 refSeqComposite,1790 refSeqComposite,1811 refSeqComposite,1824 rmsk,125 rmsk,368 transMapEnsemblV5,167 transMapEstV5,136 transMapRefSeqV5,136 transMapRnaV5,136 transMapV5,242 ucscToINSDC,8 ucscToINSDC,30 ucscToINSDC,41 ucscToRefSeq,25 ucscToRefSeq,35 uniprot,25 uniprot,821 uniprot,2003 uniprot,2031 xenoRefGene,358 xenoRefGene,379 xenoRefGene,392 databases refSeqComposite,280 refSeqComposite,427 transMapEnsemblV5,701 transMapEstV5,670 transMapRefSeqV5,670 transMapRnaV5,670 transMapV5,776 dataset refSeqComposite,536 david chainHg38,983 chainNetHg38,986 chainNetTarSyr2,986 chainTarSyr2,983 netHg38,983 netTarSyr2,983 davis transMapEnsemblV5,730 transMapEstV5,699 transMapRefSeqV5,699 transMapRnaV5,699 transMapV5,805 de augustusGene,303 transMapEnsemblV5,777 transMapEstV5,746 transMapRefSeqV5,746 transMapRnaV5,746 transMapV5,852 deamination cpgIslandExt,110 cpgIslandExtUnmasked,113 cpgIslandSuper,110 dec chainHg38,4 chainHg38,66 chainHg38,312 chainNetHg38,5 chainNetHg38,69 chainNetHg38,315 chainNetHg38Viewchain,3 chainNetHg38Viewnet,3 nestedRepeats,389 nestedRepeats,411 netHg38,4 netHg38,66 netHg38,312 rmsk,412 rmsk,434 transMapEnsemblV5,752 transMapEnsemblV5,818 transMapEstV5,721 transMapEstV5,787 transMapRefSeqV5,721 transMapRefSeqV5,787 transMapRnaV5,721 transMapRnaV5,787 transMapV5,827 transMapV5,893 default chainHg38,324 chainNetHg38,327 chainNetTarSyr2,327 chainTarSyr2,324 cpgIslandExt,195 cpgIslandExtUnmasked,198 cpgIslandSuper,195 netHg38,324 netTarSyr2,324 refSeqComposite,770 refSeqComposite,1044 refSeqComposite,1071 uniprot,225 xenoRefGene,105 xenoRefGene,198 defined refSeqComposite,631 uniprot,305 uniprot,1387 definition gap,41 gold,43 deletion chainHg38,149 chainHg38,1070 chainNetHg38,152 chainNetHg38,1073 chainNetTarSyr2,152 chainNetTarSyr2,1073 chainTarSyr2,149 chainTarSyr2,1070 netHg38,149 netHg38,1070 netTarSyr2,149 netTarSyr2,1070 refSeqComposite,954 refSeqComposite,1050 refSeqComposite,1077 rmsk,220 deletions chainHg38,117 chainHg38,182 chainNetHg38,120 chainNetHg38,185 chainNetTarSyr2,120 chainNetTarSyr2,185 chainTarSyr2,117 chainTarSyr2,182 netHg38,117 netHg38,182 netTarSyr2,117 netTarSyr2,182 delivered gap,53 gold,52 dense gold,69 nestedRepeats,157 nestedRepeats,168 dependencies genscan,183 depending uniprot,442 uniprot,808 depicts gold,73 windowmaskerSdust,15 deprecated uniprot,1044 derived chainHg38,773 chainNetHg38,776 chainNetTarSyr2,776 chainTarSyr2,773 netHg38,773 netTarSyr2,773 uniprot,830 described chainHg38,780 chainNetHg38,783 chainNetTarSyr2,783 chainTarSyr2,780 genscan,161 nestedRepeats,60 nestedRepeats,338 netHg38,780 netTarSyr2,780 refSeqComposite,1647 rmsk,96 rmsk,361 uniprot,1524 describes augustusGene,226 gap,62 gold,61 describing refSeqComposite,256 description augustusGene,12 chainHg38,12 chainHg38,785 chainNetHg38,15 chainNetHg38,788 chainNetTarSyr2,15 chainNetTarSyr2,788 chainTarSyr2,12 chainTarSyr2,785 cpgIslandExt,14 cpgIslandExtUnmasked,17 cpgIslandSuper,14 ensGene,9 ensGene,32 gap,7 gc5BaseBw,11 genscan,10 genscan,77 genscan,133 gold,8 microsat,10 nestedRepeats,14 netHg38,12 netHg38,785 netTarSyr2,12 netTarSyr2,785 refSeqComposite,11 refSeqComposite,745 rmsk,9 simpleRepeat,11 transMapEnsemblV5,14 transMapEnsemblV5,236 transMapEstV5,12 transMapEstV5,205 transMapRefSeqV5,13 transMapRefSeqV5,205 transMapRnaV5,13 transMapRnaV5,205 transMapV5,11 transMapV5,311 ucscToINSDC,13 ucscToRefSeq,8 uniprot,11 uniprot,106 windowmaskerSdust,12 xenoRefGene,12 xenoRefGene,101 descriptions augustusGene,91 designed refSeqComposite,1446 uniprot,1355 destination transMapEnsemblV5,420 transMapEstV5,389 transMapRefSeqV5,389 transMapRnaV5,389 transMapV5,495 destined uniprot,244 destuniq transMapEnsemblV5,439 transMapEstV5,408 transMapRefSeqV5,408 transMapRnaV5,408 transMapV5,514 detail genscan,164 detailed augustusGene,90 chainHg38,467 chainHg38,486 chainNetHg38,470 chainNetHg38,489 chainNetTarSyr2,470 chainNetTarSyr2,489 chainTarSyr2,467 chainTarSyr2,486 nestedRepeats,70 netHg38,467 netHg38,486 netTarSyr2,467 netTarSyr2,486 rmsk,37 uniprot,692 details refSeqComposite,96 refSeqComposite,1130 rmsk,119 transMapEnsemblV5,238 transMapEstV5,207 transMapRefSeqV5,207 transMapRnaV5,207 transMapV5,313 uniprot,499 uniprot,771 uniprot,1157 uniprot,1584 determination transMapEnsemblV5,276 transMapEstV5,245 transMapRefSeqV5,245 transMapRnaV5,245 transMapV5,351 determine transMapV5,92 determined windowmaskerSdust,19 determining chainHg38,491 chainNetHg38,494 chainNetTarSyr2,494 chainTarSyr2,491 netHg38,491 netTarSyr2,491 dev cpgIslandExt,419 cpgIslandExtUnmasked,422 cpgIslandSuper,419 nestedRepeats,387 nestedRepeats,409 rmsk,410 rmsk,432 developed chainHg38,930 chainHg38,965 chainHg38,1011 chainNetHg38,933 chainNetHg38,968 chainNetHg38,1014 chainNetTarSyr2,933 chainNetTarSyr2,968 chainNetTarSyr2,1014 chainTarSyr2,930 chainTarSyr2,965 chainTarSyr2,1011 cpgIslandExt,595 cpgIslandExtUnmasked,598 cpgIslandSuper,595 netHg38,930 netHg38,965 netHg38,1011 netTarSyr2,930 netTarSyr2,965 netTarSyr2,1011 dfam rmsk,112 di-nucleotide microsat,3 microsat,32 diagnostics refSeqComposite,590 diekhans augustusGene,288 transMapEnsemblV5,686 transMapEnsemblV5,719 transMapEnsemblV5,762 transMapEnsemblV5,794 transMapEstV5,655 transMapEstV5,688 transMapEstV5,731 transMapEstV5,763 transMapRefSeqV5,655 transMapRefSeqV5,688 transMapRefSeqV5,731 transMapRefSeqV5,763 transMapRnaV5,655 transMapRnaV5,688 transMapRnaV5,731 transMapRnaV5,763 transMapV5,761 transMapV5,794 transMapV5,837 transMapV5,869 uniprot,1540 uniprot,1957 diemand uniprot,2014 differ refSeqComposite,289 uniprot,746 uniprot,1131 difference uniprot,1251 differences ncbiRefSeqGenomicDiff,3 refSeqComposite,65 refSeqComposite,463 refSeqComposite,896 refSeqComposite,965 uniprot,374 uniprot,921 uniprot,1370 different augustusGene,39 augustusGene,85 augustusGene,96 augustusGene,144 augustusGene,155 augustusGene,179 augustusGene,193 chainHg38,566 chainNetHg38,569 chainNetTarSyr2,569 chainTarSyr2,566 ensGene,22 gc5BaseBw,50 genscan,54 netHg38,566 netTarSyr2,566 refSeqComposite,100 refSeqComposite,135 refSeqComposite,878 rmsk,149 uniprot,634 differing refSeqComposite,154 difficult transMapEnsemblV5,280 transMapEstV5,249 transMapRefSeqV5,249 transMapRnaV5,249 transMapV5,355 diffs ncbiRefSeqGenomicDiff,2 refSeqComposite,460 refSeqComposite,874 refSeqComposite,1204 refSeqComposite,1380 dinucleotide cpgIslandExt,240 cpgIslandExtUnmasked,243 cpgIslandSuper,240 dinucleotides cpgIslandExt,282 cpgIslandExt,340 cpgIslandExtUnmasked,285 cpgIslandExtUnmasked,343 cpgIslandSuper,282 cpgIslandSuper,340 directly cpgIslandExt,534 cpgIslandExtUnmasked,537 cpgIslandSuper,534 ensGene,111 uniprot,993 directory ensGene,86 ensGene,94 refSeqComposite,1536 refSeqComposite,1585 refSeqComposite,1605 rmsk,134 discarded chainHg38,699 chainNetHg38,702 chainNetTarSyr2,702 chainTarSyr2,699 netHg38,699 netTarSyr2,699 refSeqComposite,1253 transMapEnsemblV5,386 transMapEstV5,355 transMapRefSeqV5,355 transMapRnaV5,355 transMapV5,461 xenoRefGene,241 discovery transMapEnsemblV5,741 transMapEstV5,710 transMapRefSeqV5,710 transMapRnaV5,710 transMapV5,816 discussion nestedRepeats,364 rmsk,387 disease uniprot,545 uniprot,616 diseases simpleRepeat,54 display chainHg38,245 chainHg38,317 chainHg38,362 chainHg38,392 chainHg38,451 chainHg38,480 chainHg38,509 chainHg38,987 chainNetHg38,248 chainNetHg38,320 chainNetHg38,365 chainNetHg38,395 chainNetHg38,454 chainNetHg38,483 chainNetHg38,512 chainNetHg38,990 chainNetTarSyr2,248 chainNetTarSyr2,320 chainNetTarSyr2,365 chainNetTarSyr2,395 chainNetTarSyr2,454 chainNetTarSyr2,483 chainNetTarSyr2,512 chainNetTarSyr2,990 chainTarSyr2,245 chainTarSyr2,317 chainTarSyr2,362 chainTarSyr2,392 chainTarSyr2,451 chainTarSyr2,480 chainTarSyr2,509 chainTarSyr2,987 genscan,61 genscan,69 genscan,104 gold,132 nestedRepeats,111 netHg38,245 netHg38,317 netHg38,362 netHg38,392 netHg38,451 netHg38,480 netHg38,509 netHg38,987 netTarSyr2,245 netTarSyr2,317 netTarSyr2,362 netTarSyr2,392 netTarSyr2,451 netTarSyr2,480 netTarSyr2,509 netTarSyr2,987 refSeqComposite,142 refSeqComposite,454 refSeqComposite,604 refSeqComposite,725 refSeqComposite,783 refSeqComposite,839 refSeqComposite,1187 refSeqComposite,1452 rmsk,135 rmsk,141 rmsk,212 transMapEnsemblV5,93 transMapEnsemblV5,101 transMapEnsemblV5,114 transMapEstV5,62 transMapEstV5,70 transMapEstV5,83 transMapRefSeqV5,62 transMapRefSeqV5,70 transMapRefSeqV5,83 transMapRnaV5,62 transMapRnaV5,70 transMapRnaV5,83 transMapV5,168 transMapV5,176 transMapV5,189 uniprot,446 xenoRefGene,45 xenoRefGene,53 xenoRefGene,82 xenoRefGene,118 xenoRefGene,161 displayed chainHg38,428 chainHg38,525 chainHg38,704 chainNetHg38,431 chainNetHg38,528 chainNetHg38,707 chainNetTarSyr2,431 chainNetTarSyr2,528 chainNetTarSyr2,707 chainTarSyr2,428 chainTarSyr2,525 chainTarSyr2,704 cpgIslandExt,204 cpgIslandExtUnmasked,207 cpgIslandSuper,204 gc5BaseBw,54 nestedRepeats,124 nestedRepeats,217 netHg38,428 netHg38,525 netHg38,704 netTarSyr2,428 netTarSyr2,525 netTarSyr2,704 refSeqComposite,1123 xenoRefGene,206 displays chainHg38,124 chainNetHg38,127 chainNetTarSyr2,127 chainTarSyr2,124 cpgIslandExt,174 cpgIslandExtUnmasked,177 cpgIslandSuper,174 microsat,13 netHg38,124 netTarSyr2,124 rmsk,145 simpleRepeat,14 dissertation augustusGene,105 distance transMapEnsemblV5,223 transMapEstV5,192 transMapRefSeqV5,192 transMapRnaV5,192 transMapV5,298 distances transMapEnsemblV5,70 transMapEstV5,39 transMapRefSeqV5,39 transMapRnaV5,39 transMapV5,38 distant transMapEnsemblV5,272 transMapEstV5,241 transMapRefSeqV5,241 transMapRnaV5,241 transMapV5,65 transMapV5,347 distinguish cpgIslandExt,75 cpgIslandExtUnmasked,78 cpgIslandSuper,75 distinguished gold,86 distributions augustusGene,83 genscan,42 disulf unipDisulfBond,1 uniprot,472 disulfide unipDisulfBond,4 uniprot,333 uniprot,335 diverged chainHg38,922 chainNetHg38,925 chainNetTarSyr2,925 chainTarSyr2,922 nestedRepeats,212 netHg38,922 netTarSyr2,922 transMapV5,153 divided uniprot,56 dna chainHg38,1031 chainNetHg38,1034 chainNetTarSyr2,1034 chainTarSyr2,1031 cpgIslandExt,60 cpgIslandExt,79 cpgIslandExt,92 cpgIslandExtUnmasked,63 cpgIslandExtUnmasked,82 cpgIslandExtUnmasked,95 cpgIslandSuper,60 cpgIslandSuper,79 cpgIslandSuper,92 genscan,219 microsat,123 nestedRepeats,33 nestedRepeats,41 netHg38,1031 netTarSyr2,1031 refSeqComposite,1089 rmsk,23 rmsk,31 rmsk,174 rmsk,177 rmsk,257 simpleRepeat,83 do cpgIslandExt,140 cpgIslandExtUnmasked,143 cpgIslandSuper,140 refSeqComposite,391 transMapEnsemblV5,321 transMapEstV5,290 transMapRefSeqV5,290 transMapRnaV5,290 transMapV5,396 uniprot,168 uniprot,1129 doc rmsk,132 document gap,59 gold,58 documentation gap,31 gold,33 dollar cpgIslandExt,425 cpgIslandExt,427 cpgIslandExt,431 cpgIslandExt,433 cpgIslandExt,457 cpgIslandExt,459 cpgIslandExt,461 cpgIslandExt,463 cpgIslandExt,465 cpgIslandExt,468 cpgIslandExt,471 cpgIslandExt,476 cpgIslandExt,479 cpgIslandExt,481 cpgIslandExtUnmasked,428 cpgIslandExtUnmasked,430 cpgIslandExtUnmasked,434 cpgIslandExtUnmasked,436 cpgIslandExtUnmasked,460 cpgIslandExtUnmasked,462 cpgIslandExtUnmasked,464 cpgIslandExtUnmasked,466 cpgIslandExtUnmasked,468 cpgIslandExtUnmasked,471 cpgIslandExtUnmasked,474 cpgIslandExtUnmasked,479 cpgIslandExtUnmasked,482 cpgIslandExtUnmasked,484 cpgIslandSuper,425 cpgIslandSuper,427 cpgIslandSuper,431 cpgIslandSuper,433 cpgIslandSuper,457 cpgIslandSuper,459 cpgIslandSuper,461 cpgIslandSuper,463 cpgIslandSuper,465 cpgIslandSuper,468 cpgIslandSuper,471 cpgIslandSuper,476 cpgIslandSuper,479 cpgIslandSuper,481 domain unipLocExtra,4 domains unipDomain,1 unipDomain,3 unipLocCytopl,4 unipLocTransMemb,4 uniprot,255 uniprot,257 uniprot,266 uniprot,268 uniprot,277 uniprot,279 uniprot,323 uniprot,325 uniprot,331 uniprot,391 uniprot,514 uniprot,516 uniprot,519 uniprot,550 done augustusGene,265 augustusGene,281 donor genscan,31 double chainHg38,132 chainHg38,163 chainNetHg38,135 chainNetHg38,166 chainNetTarSyr2,135 chainNetTarSyr2,166 chainTarSyr2,132 chainTarSyr2,163 netHg38,132 netHg38,163 netTarSyr2,132 netTarSyr2,163 refSeqComposite,1024 double-lined chainHg38,225 chainNetHg38,228 chainNetTarSyr2,228 chainTarSyr2,225 netHg38,225 netTarSyr2,225 double-sided chainHg38,106 chainNetHg38,109 chainNetTarSyr2,109 chainTarSyr2,106 netHg38,106 netTarSyr2,106 down ensGene,186 download ensGene,93 ensGene,143 refSeqComposite,1571 refSeqComposite,1714 transMapEnsemblV5,563 transMapEstV5,532 transMapRefSeqV5,532 transMapRnaV5,532 transMapV5,638 uniprot,1744 uniprot,1983 downloaded refSeqComposite,1170 refSeqComposite,1336 refSeqComposite,1525 transMapEnsemblV5,560 transMapEnsemblV5,629 transMapEstV5,529 transMapEstV5,598 transMapRefSeqV5,529 transMapRefSeqV5,598 transMapRnaV5,529 transMapRnaV5,598 transMapV5,635 transMapV5,704 ucscToINSDC,36 ucscToRefSeq,30 uniprot,1741 uniprot,1777 downloading transMapEnsemblV5,639 transMapEstV5,608 transMapRefSeqV5,608 transMapRnaV5,608 transMapV5,714 uniprot,1787 downloads ensGene,74 ensGene,85 refSeqComposite,1339 refSeqComposite,1355 refSeqComposite,1494 refSeqComposite,1584 refSeqComposite,1609 refSeqComposite,1688 rmsk,76 uniprot,1698 downstream refSeqComposite,1463 dr refSeqComposite,1802 xenoRefGene,370 drawn gap,109 gold,128 draws uniprot,1532 drosophila augustusGene,213 due chainHg38,146 chainHg38,218 chainHg38,230 chainNetHg38,149 chainNetHg38,221 chainNetHg38,233 chainNetTarSyr2,149 chainNetTarSyr2,221 chainNetTarSyr2,233 chainTarSyr2,146 chainTarSyr2,218 chainTarSyr2,230 netHg38,146 netHg38,218 netHg38,230 netTarSyr2,146 netTarSyr2,218 netTarSyr2,230 refSeqComposite,983 uniprot,848 uniprot,919 uniprot,1368 duplicate uniprot,594 duplication chainHg38,1069 chainNetHg38,1072 chainNetTarSyr2,1072 chainTarSyr2,1069 cpgIslandExt,95 cpgIslandExtUnmasked,98 cpgIslandSuper,95 netHg38,1069 netTarSyr2,1069 duplications transMapEnsemblV5,314 transMapEnsemblV5,513 transMapEstV5,283 transMapEstV5,482 transMapRefSeqV5,283 transMapRefSeqV5,482 transMapRnaV5,283 transMapRnaV5,482 transMapV5,389 transMapV5,588 during chainHg38,827 chainNetHg38,830 chainNetTarSyr2,830 chainTarSyr2,827 netHg38,827 netTarSyr2,827 dynamic chainHg38,660 chainNetHg38,663 chainNetTarSyr2,663 chainTarSyr2,660 netHg38,660 netTarSyr2,660 e ensGene,173 uniprot,2021 e.g chainHg38,379 chainNetHg38,382 chainNetTarSyr2,382 chainTarSyr2,379 netHg38,379 netTarSyr2,379 refSeqComposite,1140 uniprot,398 uniprot,467 e247 transMapEnsemblV5,821 transMapEstV5,790 transMapRefSeqV5,790 transMapRnaV5,790 transMapV5,896 each chainHg38,263 chainNetHg38,266 chainNetTarSyr2,266 chainTarSyr2,263 cpgIslandExt,239 cpgIslandExt,253 cpgIslandExtUnmasked,242 cpgIslandExtUnmasked,256 cpgIslandSuper,239 cpgIslandSuper,253 genscan,99 nestedRepeats,120 netHg38,263 netTarSyr2,263 refSeqComposite,546 refSeqComposite,1435 transMapEnsemblV5,392 transMapEnsemblV5,406 transMapEnsemblV5,415 transMapEnsemblV5,434 transMapEstV5,361 transMapEstV5,375 transMapEstV5,384 transMapEstV5,403 transMapRefSeqV5,361 transMapRefSeqV5,375 transMapRefSeqV5,384 transMapRefSeqV5,403 transMapRnaV5,361 transMapRnaV5,375 transMapRnaV5,384 transMapRnaV5,403 transMapV5,467 transMapV5,481 transMapV5,490 transMapV5,509 uniprot,151 echo uniprot,1925 edge uniprot,1182 uniprot,1451 editors genscan,195 either chainHg38,129 chainNetHg38,132 chainNetTarSyr2,132 chainTarSyr2,129 gap,88 netHg38,129 netTarSyr2,129 rmsk,273 uniprot,816 uniprot,1398 electronic nestedRepeats,348 rmsk,371 element rmsk,228 elements nestedRepeats,352 nestedRepeats,380 rmsk,3 rmsk,156 rmsk,164 rmsk,169 rmsk,176 rmsk,375 rmsk,403 elsevier genscan,202 em windowmaskerSdust,93 emerged chainHg38,833 chainNetHg38,836 chainNetTarSyr2,836 chainTarSyr2,833 netHg38,833 netTarSyr2,833 end refSeqComposite,1058 refSeqComposite,1566 rmsk,245 transMapEnsemblV5,676 transMapEstV5,645 transMapRefSeqV5,645 transMapRnaV5,645 transMapV5,751 uniprot,126 uniprot,210 uniprot,1823 enough refSeqComposite,1032 ensembl ensGene,1 ensGene,3 ensGene,16 ensGene,38 ensGene,57 ensGene,151 ensGene,162 ensGene,191 transMapEnsemblV5,2 transMapEnsemblV5,4 transMapEnsemblV5,20 transMapEnsemblV5,40 transMapEnsemblV5,47 transMapEnsemblV5,58 transMapEnsemblV5,595 transMapEnsemblV5,711 transMapEstV5,564 transMapEstV5,680 transMapRefSeqV5,564 transMapRefSeqV5,680 transMapRnaV5,564 transMapRnaV5,680 transMapV5,670 transMapV5,786 uniprot,731 uniprot,834 uniprot,865 ensgene.txt.gz ensGene,88 ensure transMapEnsemblV5,388 transMapEstV5,357 transMapRefSeqV5,357 transMapRnaV5,357 transMapV5,463 enter chainHg38,373 chainNetHg38,376 chainNetTarSyr2,376 chainTarSyr2,373 netHg38,373 netTarSyr2,373 entire cpgIslandExt,301 cpgIslandExtUnmasked,304 cpgIslandSuper,301 windowmaskerSdust,37 entirely uniprot,1434 entries refSeqComposite,1364 ermolaeva refSeqComposite,1765 xenoRefGene,333 errors refSeqComposite,957 est refSeqComposite,265 refSeqComposite,365 transMapEnsemblV5,692 transMapEstV5,4 transMapEstV5,18 transMapEstV5,661 transMapRefSeqV5,661 transMapRnaV5,661 transMapV5,767 established refSeqComposite,692 ests transMapEnsemblV5,178 transMapEnsemblV5,604 transMapEstV5,2 transMapEstV5,147 transMapEstV5,573 transMapRefSeqV5,147 transMapRefSeqV5,573 transMapRnaV5,147 transMapRnaV5,573 transMapV5,253 transMapV5,679 et cpgIslandExt,377 cpgIslandExtUnmasked,380 cpgIslandSuper,377 ensGene,45 ensGene,188 refSeqComposite,1775 transMapEnsemblV5,738 transMapEstV5,707 transMapRefSeqV5,707 transMapRnaV5,707 transMapV5,813 xenoRefGene,343 etc uniprot,479 evaluate uniprot,1461 evaluated cpgIslandExt,257 cpgIslandExtUnmasked,260 cpgIslandSuper,257 even uniprot,136 every chainHg38,280 chainNetHg38,283 chainNetTarSyr2,283 chainTarSyr2,280 netHg38,280 netTarSyr2,280 refSeqComposite,481 uniprot,1571 evidence refSeqComposite,262 refSeqComposite,277 evolution chainHg38,1066 chainNetHg38,1069 chainNetTarSyr2,1069 chainTarSyr2,1066 netHg38,1066 netTarSyr2,1066 evolutionary cpgIslandExt,98 cpgIslandExtUnmasked,101 cpgIslandSuper,98 transMapEnsemblV5,69 transMapEstV5,38 transMapRefSeqV5,38 transMapRnaV5,38 transMapV5,37 ewing transMapEnsemblV5,732 transMapEstV5,701 transMapRefSeqV5,701 transMapRnaV5,701 transMapV5,807 exact uniprot,1622 uniprot,1747 example refSeqComposite,1540 rmsk,256 transMapEnsemblV5,451 transMapEnsemblV5,663 transMapEstV5,420 transMapEstV5,632 transMapRefSeqV5,420 transMapRefSeqV5,632 transMapRnaV5,420 transMapRnaV5,632 transMapV5,98 transMapV5,526 transMapV5,738 uniprot,1450 uniprot,1811 uniprot,1901 examples refSeqComposite,407 except refSeqComposite,42 uniprot,508 exe cpgIslandExt,578 cpgIslandExtUnmasked,581 cpgIslandSuper,578 uniprot,1918 exist chainHg38,412 chainNetHg38,415 chainNetTarSyr2,415 chainTarSyr2,412 cpgIslandExt,179 cpgIslandExtUnmasked,182 cpgIslandSuper,179 gold,98 netHg38,412 netTarSyr2,412 refSeqComposite,294 exists refSeqComposite,331 exon augustusGene,86 exons chainHg38,48 chainNetHg38,51 chainNetTarSyr2,51 chainTarSyr2,48 genscan,44 netHg38,48 netTarSyr2,48 transMapEnsemblV5,745 transMapEstV5,714 transMapRefSeqV5,714 transMapRnaV5,714 transMapV5,820 exp cpgIslandExt,381 cpgIslandExtUnmasked,384 cpgIslandSuper,381 expanded refSeqComposite,669 expansions simpleRepeat,48 expected cpgIslandExt,285 cpgIslandExt,366 cpgIslandExtUnmasked,288 cpgIslandExtUnmasked,369 cpgIslandSuper,285 cpgIslandSuper,366 expense transMapEnsemblV5,299 transMapEstV5,268 transMapRefSeqV5,268 transMapRnaV5,268 transMapV5,374 experimentally uniprot,304 explanation gc5BaseBw,66 explored cpgIslandExt,514 cpgIslandExtUnmasked,517 cpgIslandSuper,514 ensGene,62 refSeqComposite,1312 uniprot,1716 expression cpgIslandExt,11 cpgIslandExt,146 cpgIslandExtUnmasked,14 cpgIslandExtUnmasked,149 cpgIslandSuper,11 cpgIslandSuper,146 extend rmsk,308 extra transMapEnsemblV5,555 transMapEstV5,524 transMapRefSeqV5,524 transMapRnaV5,524 transMapV5,630 extracellular unipLocExtra,1 unipLocExtra,3 uniprot,254 uniprot,262 uniprot,513 uniprot,566 extract refSeqComposite,1542 extracted nestedRepeats,23 f chainHg38,1039 chainNetHg38,1042 chainNetTarSyr2,1042 chainTarSyr2,1039 gold,156 netHg38,1039 netTarSyr2,1039 refSeqComposite,1762 xenoRefGene,330 facilitate genscan,106 uniprot,1852 famiglietti uniprot,2018 families uniprot,1395 family rmsk,249 faq augustusGene,45 ensGene,28 genscan,60 nestedRepeats,298 refSeqComposite,141 rmsk,321 transMapEnsemblV5,582 transMapEstV5,551 transMapRefSeqV5,551 transMapRnaV5,551 transMapV5,657 uniprot,1839 far uniprot,599 farrell refSeqComposite,1767 xenoRefGene,335 fasta refSeqComposite,1668 feature chainHg38,249 chainNetHg38,252 chainNetTarSyr2,252 chainTarSyr2,249 genscan,129 netHg38,249 netTarSyr2,249 refSeqComposite,827 refSeqComposite,860 transMapEnsemblV5,118 transMapEstV5,87 transMapRefSeqV5,87 transMapRnaV5,87 transMapV5,193 uniprot,64 uniprot,524 uniprot,613 xenoRefGene,149 xenoRefGene,182 features refSeqComposite,728 transMapEnsemblV5,657 transMapEstV5,626 transMapRefSeqV5,626 transMapRnaV5,626 transMapV5,732 uniprot,694 uniprot,1805 xenoRefGene,85 fed chainHg38,624 chainNetHg38,627 chainNetTarSyr2,627 chainTarSyr2,624 netHg38,624 netTarSyr2,624 feedback refSeqComposite,108 uniprot,1445 uniprot,1961 fewer transMapV5,161 ffer windowmaskerSdust,96 field augustusGene,120 file cpgIslandExt,583 cpgIslandExtUnmasked,586 cpgIslandSuper,583 gap,52 gap,68 gold,51 gold,67 refSeqComposite,1175 refSeqComposite,1386 refSeqComposite,1397 refSeqComposite,1662 uniprot,884 uniprot,1511 uniprot,1614 uniprot,1737 uniprot,1756 windowmaskerSdust,77 filenames uniprot,1748 uniprot,1894 files ensGene,78 refSeqComposite,1168 refSeqComposite,1487 transMapEnsemblV5,550 transMapEnsemblV5,584 transMapEstV5,519 transMapEstV5,553 transMapRefSeqV5,519 transMapRefSeqV5,553 transMapRnaV5,519 transMapRnaV5,553 transMapV5,625 transMapV5,659 uniprot,1863 fill chainHg38,857 chainHg38,890 chainNetHg38,860 chainNetHg38,893 chainNetTarSyr2,860 chainNetTarSyr2,893 chainTarSyr2,857 chainTarSyr2,890 netHg38,857 netHg38,890 netTarSyr2,857 netTarSyr2,890 filled chainHg38,421 chainHg38,440 chainHg38,839 chainHg38,912 chainNetHg38,424 chainNetHg38,443 chainNetHg38,842 chainNetHg38,915 chainNetTarSyr2,424 chainNetTarSyr2,443 chainNetTarSyr2,842 chainNetTarSyr2,915 chainTarSyr2,421 chainTarSyr2,440 chainTarSyr2,839 chainTarSyr2,912 netHg38,421 netHg38,440 netHg38,839 netHg38,912 netTarSyr2,421 netTarSyr2,440 netTarSyr2,839 netTarSyr2,912 filter chainHg38,385 chainNetHg38,388 chainNetTarSyr2,388 chainTarSyr2,385 genscan,82 netHg38,385 netTarSyr2,385 uniprot,187 uniprot,664 filtered transMapEnsemblV5,77 transMapEnsemblV5,355 transMapEstV5,46 transMapEstV5,324 transMapRefSeqV5,46 transMapRefSeqV5,324 transMapRnaV5,46 transMapRnaV5,324 transMapV5,45 transMapV5,430 uniprot,1480 uniprot,1499 filtering transMapEnsemblV5,240 transMapEnsemblV5,308 transMapEstV5,209 transMapEstV5,277 transMapRefSeqV5,209 transMapRefSeqV5,277 transMapRnaV5,209 transMapRnaV5,277 transMapV5,315 transMapV5,383 uniprot,693 uniprot,912 uniprot,1154 final cpgIslandExt,89 cpgIslandExtUnmasked,92 cpgIslandSuper,89 uniprot,1153 find chainHg38,669 chainNetHg38,672 chainNetTarSyr2,672 chainTarSyr2,669 netHg38,669 netTarSyr2,669 rmsk,117 finder microsat,94 microsat,107 microsat,118 simpleRepeat,25 simpleRepeat,78 finding augustusGene,306 chainHg38,292 chainNetHg38,295 chainNetTarSyr2,295 chainTarSyr2,292 netHg38,292 netTarSyr2,292 transMapEnsemblV5,780 transMapEstV5,749 transMapRefSeqV5,749 transMapRnaV5,749 transMapV5,855 finds transMapV5,160 finger uniprot,327 finished gold,158 transMapEnsemblV5,366 transMapEstV5,335 transMapRefSeqV5,335 transMapRnaV5,335 transMapV5,441 first chainHg38,797 chainNetHg38,800 chainNetTarSyr2,800 chainTarSyr2,797 netHg38,797 netTarSyr2,797 refSeqComposite,1432 uniprot,70 fish augustusGene,201 fit chainHg38,817 chainNetHg38,820 chainNetTarSyr2,820 chainTarSyr2,817 nestedRepeats,175 netHg38,817 netTarSyr2,817 refSeqComposite,393 five refSeqComposite,877 refSeqComposite,893 fix uniprot,851 flag nestedRepeats,287 rmsk,294 flags nestedRepeats,289 rmsk,296 fly augustusGene,214 follow refSeqComposite,602 followed cpgIslandExt,47 cpgIslandExtUnmasked,50 cpgIslandSuper,47 following chainHg38,678 chainNetHg38,681 chainNetTarSyr2,681 chainTarSyr2,678 cpgIslandExt,260 cpgIslandExt,408 cpgIslandExtUnmasked,263 cpgIslandExtUnmasked,411 cpgIslandSuper,260 cpgIslandSuper,408 gap,121 genscan,81 netHg38,678 netTarSyr2,678 refSeqComposite,452 refSeqComposite,1553 transMapEnsemblV5,592 transMapEstV5,561 transMapRefSeqV5,561 transMapRnaV5,561 transMapV5,667 windowmaskerSdust,56 follows genscan,67 refSeqComposite,899 refSeqComposite,1411 transMapEnsemblV5,99 transMapEnsemblV5,218 transMapEstV5,68 transMapEstV5,187 transMapRefSeqV5,68 transMapRefSeqV5,187 transMapRnaV5,68 transMapRnaV5,187 transMapV5,174 transMapV5,293 xenoRefGene,51 for augustusGene,34 augustusGene,52 augustusGene,68 augustusGene,80 augustusGene,175 augustusGene,184 augustusGene,192 augustusGene,232 augustusGene,253 augustusGene,260 augustusGene,274 chainHg38,262 chainHg38,279 chainHg38,291 chainHg38,298 chainHg38,498 chainNetHg38,265 chainNetHg38,282 chainNetHg38,294 chainNetHg38,301 chainNetHg38,501 chainNetTarSyr2,265 chainNetTarSyr2,282 chainNetTarSyr2,294 chainNetTarSyr2,301 chainNetTarSyr2,501 chainTarSyr2,262 chainTarSyr2,279 chainTarSyr2,291 chainTarSyr2,298 chainTarSyr2,498 cpgIslandExt,133 cpgIslandExt,162 cpgIslandExt,242 cpgIslandExt,246 cpgIslandExt,258 cpgIslandExt,309 cpgIslandExt,500 cpgIslandExt,556 cpgIslandExtUnmasked,136 cpgIslandExtUnmasked,165 cpgIslandExtUnmasked,245 cpgIslandExtUnmasked,249 cpgIslandExtUnmasked,261 cpgIslandExtUnmasked,312 cpgIslandExtUnmasked,503 cpgIslandExtUnmasked,559 cpgIslandSuper,133 cpgIslandSuper,162 cpgIslandSuper,242 cpgIslandSuper,246 cpgIslandSuper,258 cpgIslandSuper,309 cpgIslandSuper,500 cpgIslandSuper,556 cytoBandIdeo,5 ensGene,17 ensGene,30 ensGene,72 ensGene,79 ensGene,98 ensGene,152 ensGene,157 gc5BaseBw,64 genscan,49 genscan,71 genscan,124 genscan,131 genscan,174 microsat,95 nestedRepeats,35 nestedRepeats,239 nestedRepeats,293 nestedRepeats,299 nestedRepeats,311 nestedRepeats,362 netHg38,262 netHg38,279 netHg38,291 netHg38,298 netHg38,498 netTarSyr2,262 netTarSyr2,279 netTarSyr2,291 netTarSyr2,298 netTarSyr2,498 refSeqComposite,43 refSeqComposite,75 refSeqComposite,94 refSeqComposite,109 refSeqComposite,125 refSeqComposite,130 refSeqComposite,237 refSeqComposite,246 refSeqComposite,332 refSeqComposite,396 refSeqComposite,456 refSeqComposite,480 refSeqComposite,545 refSeqComposite,606 refSeqComposite,727 refSeqComposite,751 refSeqComposite,855 refSeqComposite,1186 refSeqComposite,1300 refSeqComposite,1341 refSeqComposite,1451 refSeqComposite,1530 refSeqComposite,1539 refSeqComposite,1670 refSeqComposite,1698 rmsk,25 rmsk,120 rmsk,255 rmsk,300 rmsk,322 rmsk,334 rmsk,385 simpleRepeat,30 simpleRepeat,56 transMapEnsemblV5,41 transMapEnsemblV5,45 transMapEnsemblV5,67 transMapEnsemblV5,103 transMapEnsemblV5,131 transMapEnsemblV5,148 transMapEnsemblV5,191 transMapEnsemblV5,219 transMapEnsemblV5,237 transMapEnsemblV5,268 transMapEnsemblV5,270 transMapEnsemblV5,288 transMapEnsemblV5,292 transMapEnsemblV5,391 transMapEnsemblV5,405 transMapEnsemblV5,414 transMapEnsemblV5,450 transMapEnsemblV5,526 transMapEnsemblV5,541 transMapEnsemblV5,570 transMapEnsemblV5,634 transMapEnsemblV5,638 transMapEnsemblV5,662 transMapEnsemblV5,805 transMapEstV5,36 transMapEstV5,72 transMapEstV5,100 transMapEstV5,117 transMapEstV5,160 transMapEstV5,188 transMapEstV5,206 transMapEstV5,237 transMapEstV5,239 transMapEstV5,257 transMapEstV5,261 transMapEstV5,360 transMapEstV5,374 transMapEstV5,383 transMapEstV5,419 transMapEstV5,495 transMapEstV5,510 transMapEstV5,539 transMapEstV5,603 transMapEstV5,607 transMapEstV5,631 transMapEstV5,774 transMapRefSeqV5,36 transMapRefSeqV5,72 transMapRefSeqV5,100 transMapRefSeqV5,117 transMapRefSeqV5,160 transMapRefSeqV5,188 transMapRefSeqV5,206 transMapRefSeqV5,237 transMapRefSeqV5,239 transMapRefSeqV5,257 transMapRefSeqV5,261 transMapRefSeqV5,360 transMapRefSeqV5,374 transMapRefSeqV5,383 transMapRefSeqV5,419 transMapRefSeqV5,495 transMapRefSeqV5,510 transMapRefSeqV5,539 transMapRefSeqV5,603 transMapRefSeqV5,607 transMapRefSeqV5,631 transMapRefSeqV5,774 transMapRnaV5,36 transMapRnaV5,72 transMapRnaV5,100 transMapRnaV5,117 transMapRnaV5,160 transMapRnaV5,188 transMapRnaV5,206 transMapRnaV5,237 transMapRnaV5,239 transMapRnaV5,257 transMapRnaV5,261 transMapRnaV5,360 transMapRnaV5,374 transMapRnaV5,383 transMapRnaV5,419 transMapRnaV5,495 transMapRnaV5,510 transMapRnaV5,539 transMapRnaV5,603 transMapRnaV5,607 transMapRnaV5,631 transMapRnaV5,774 transMapV5,35 transMapV5,63 transMapV5,97 transMapV5,99 transMapV5,152 transMapV5,178 transMapV5,206 transMapV5,223 transMapV5,266 transMapV5,294 transMapV5,312 transMapV5,343 transMapV5,345 transMapV5,363 transMapV5,367 transMapV5,466 transMapV5,480 transMapV5,489 transMapV5,525 transMapV5,601 transMapV5,616 transMapV5,645 transMapV5,709 transMapV5,713 transMapV5,737 transMapV5,880 ucscToINSDC,45 ucscToRefSeq,39 uniprot,75 uniprot,78 uniprot,401 uniprot,405 uniprot,462 uniprot,497 uniprot,532 uniprot,549 uniprot,697 uniprot,739 uniprot,743 uniprot,770 uniprot,842 uniprot,846 uniprot,861 uniprot,886 uniprot,964 uniprot,997 uniprot,1017 uniprot,1023 uniprot,1057 uniprot,1070 uniprot,1097 uniprot,1119 uniprot,1211 uniprot,1238 uniprot,1320 uniprot,1393 uniprot,1427 uniprot,1627 uniprot,1644 uniprot,1651 uniprot,1661 uniprot,1726 uniprot,1782 uniprot,1786 uniprot,1810 uniprot,1833 uniprot,1840 uniprot,1869 uniprot,1977 uniprot,1982 uniprot,2034 windowmaskerSdust,35 windowmaskerSdust,86 windowmaskerSdust,103 xenoRefGene,21 xenoRefGene,55 xenoRefGene,177 form uniprot,1665 format chainHg38,615 chainNetHg38,618 chainNetTarSyr2,618 chainTarSyr2,615 ensGene,77 ensGene,97 gap,64 gold,63 netHg38,615 netTarSyr2,615 refSeqComposite,1176 refSeqComposite,1367 refSeqComposite,1387 refSeqComposite,1413 refSeqComposite,1427 refSeqComposite,1574 refSeqComposite,1588 refSeqComposite,1596 refSeqComposite,1669 transMapEnsemblV5,423 transMapEstV5,392 transMapRefSeqV5,392 transMapRnaV5,392 transMapV5,498 formats refSeqComposite,1185 uniprot,885 uniprot,1865 formula cpgIslandExt,373 cpgIslandExtUnmasked,376 cpgIslandSuper,373 forth chainHg38,447 chainNetHg38,450 chainNetTarSyr2,450 chainTarSyr2,447 netHg38,447 netTarSyr2,447 found augustusGene,100 ensGene,139 gold,139 refSeqComposite,1200 refSeqComposite,1400 refSeqComposite,1685 refSeqComposite,1710 transMapEnsemblV5,646 transMapEstV5,615 transMapRefSeqV5,615 transMapRnaV5,615 transMapV5,721 uniprot,241 uniprot,1128 uniprot,1271 uniprot,1328 uniprot,1557 uniprot,1751 uniprot,1794 four chainHg38,515 chainNetHg38,518 chainNetTarSyr2,518 chainTarSyr2,515 netHg38,515 netTarSyr2,515 fragments gold,4 nestedRepeats,3 nestedRepeats,19 nestedRepeats,82 nestedRepeats,101 nestedRepeats,127 nestedRepeats,139 nestedRepeats,191 nestedRepeats,205 nestedRepeats,208 free uniprot,1435 from augustusGene,19 chainHg38,179 chainHg38,310 chainHg38,567 chainHg38,591 chainHg38,774 chainHg38,947 chainHg38,979 chainNetHg38,182 chainNetHg38,313 chainNetHg38,570 chainNetHg38,594 chainNetHg38,777 chainNetHg38,950 chainNetHg38,982 chainNetTarSyr2,182 chainNetTarSyr2,313 chainNetTarSyr2,570 chainNetTarSyr2,594 chainNetTarSyr2,777 chainNetTarSyr2,950 chainNetTarSyr2,982 chainTarSyr2,179 chainTarSyr2,310 chainTarSyr2,567 chainTarSyr2,591 chainTarSyr2,774 chainTarSyr2,947 chainTarSyr2,979 cpgIslandExt,81 cpgIslandExt,496 cpgIslandExt,535 cpgIslandExt,563 cpgIslandExt,574 cpgIslandExtUnmasked,84 cpgIslandExtUnmasked,499 cpgIslandExtUnmasked,538 cpgIslandExtUnmasked,566 cpgIslandExtUnmasked,577 cpgIslandSuper,81 cpgIslandSuper,496 cpgIslandSuper,535 cpgIslandSuper,563 cpgIslandSuper,574 ensGene,106 ensGene,112 gap,49 genscan,15 gold,3 gold,48 nestedRepeats,24 nestedRepeats,50 nestedRepeats,72 netHg38,179 netHg38,310 netHg38,567 netHg38,591 netHg38,774 netHg38,947 netHg38,979 netTarSyr2,179 netTarSyr2,310 netTarSyr2,567 netTarSyr2,591 netTarSyr2,774 netTarSyr2,947 netTarSyr2,979 refSeqComposite,5 refSeqComposite,27 refSeqComposite,290 refSeqComposite,296 refSeqComposite,424 refSeqComposite,488 refSeqComposite,847 refSeqComposite,1107 refSeqComposite,1162 refSeqComposite,1171 refSeqComposite,1337 refSeqComposite,1492 refSeqComposite,1520 refSeqComposite,1533 refSeqComposite,1581 refSeqComposite,1602 refSeqComposite,1616 refSeqComposite,1723 rmsk,86 transMapEnsemblV5,29 transMapEnsemblV5,159 transMapEnsemblV5,561 transMapEnsemblV5,624 transMapEnsemblV5,689 transMapEstV5,27 transMapEstV5,128 transMapEstV5,530 transMapEstV5,593 transMapEstV5,658 transMapRefSeqV5,27 transMapRefSeqV5,128 transMapRefSeqV5,530 transMapRefSeqV5,593 transMapRefSeqV5,658 transMapRnaV5,27 transMapRnaV5,128 transMapRnaV5,530 transMapRnaV5,593 transMapRnaV5,658 transMapV5,26 transMapV5,113 transMapV5,234 transMapV5,636 transMapV5,699 transMapV5,764 ucscToINSDC,25 ucscToINSDC,37 ucscToRefSeq,20 ucscToRefSeq,31 uniprot,21 uniprot,36 uniprot,115 uniprot,198 uniprot,250 uniprot,557 uniprot,747 uniprot,831 uniprot,890 uniprot,915 uniprot,1507 uniprot,1696 uniprot,1742 uniprot,1772 uniprot,1844 uniprot,1953 uniprot,1962 windowmaskerSdust,41 xenoRefGene,29 xenoRefGene,169 xenoRefGene,290 frommer cpgIslandExt,606 cpgIslandExtUnmasked,609 cpgIslandSuper,606 ftp windowmaskerSdust,44 full chainHg38,243 chainHg38,391 chainNetHg38,246 chainNetHg38,394 chainNetTarSyr2,246 chainNetTarSyr2,394 chainTarSyr2,243 chainTarSyr2,391 nestedRepeats,118 netHg38,243 netHg38,391 netTarSyr2,243 netTarSyr2,391 rmsk,140 transMapEnsemblV5,52 transMapEnsemblV5,282 transMapEstV5,251 transMapRefSeqV5,251 transMapRnaV5,251 transMapV5,357 uniprot,486 uniprot,528 uniprot,540 full-length refSeqComposite,267 furthermore augustusGene,64 future rmsk,272 g cpgIslandExt,51 cpgIslandExt,392 cpgIslandExt,597 cpgIslandExtUnmasked,54 cpgIslandExtUnmasked,395 cpgIslandExtUnmasked,600 cpgIslandSuper,51 cpgIslandSuper,392 cpgIslandSuper,597 ensGene,175 gc5BaseBw,20 microsat,115 refSeqComposite,908 refSeqComposite,960 refSeqComposite,1084 simpleRepeat,75 g-29-17098-172 chainNetTarSyr2,689 chainTarSyr2,686 netTarSyr2,686 g-31-125100-114 chainHg38,686 chainNetHg38,689 netHg38,686 gambiae augustusGene,219 gap chainHg38,78 chainHg38,88 chainHg38,191 chainHg38,484 chainHg38,496 chainHg38,519 chainHg38,537 chainHg38,552 chainHg38,569 chainHg38,710 chainHg38,841 chainNetHg38,81 chainNetHg38,91 chainNetHg38,194 chainNetHg38,487 chainNetHg38,499 chainNetHg38,522 chainNetHg38,540 chainNetHg38,555 chainNetHg38,572 chainNetHg38,713 chainNetHg38,844 chainNetTarSyr2,81 chainNetTarSyr2,91 chainNetTarSyr2,194 chainNetTarSyr2,487 chainNetTarSyr2,499 chainNetTarSyr2,522 chainNetTarSyr2,540 chainNetTarSyr2,555 chainNetTarSyr2,572 chainNetTarSyr2,713 chainNetTarSyr2,844 chainTarSyr2,78 chainTarSyr2,88 chainTarSyr2,191 chainTarSyr2,484 chainTarSyr2,496 chainTarSyr2,519 chainTarSyr2,537 chainTarSyr2,552 chainTarSyr2,569 chainTarSyr2,710 chainTarSyr2,841 gap,1 gap,2 gap,92 gap,103 gap,116 netHg38,78 netHg38,88 netHg38,191 netHg38,484 netHg38,496 netHg38,519 netHg38,537 netHg38,552 netHg38,569 netHg38,710 netHg38,841 netTarSyr2,78 netTarSyr2,88 netTarSyr2,191 netTarSyr2,484 netTarSyr2,496 netTarSyr2,519 netTarSyr2,537 netTarSyr2,552 netTarSyr2,569 netTarSyr2,710 netTarSyr2,841 refSeqComposite,934 refSeqComposite,967 refSeqComposite,1023 refSeqComposite,1025 transMapEnsemblV5,143 transMapEstV5,112 transMapRefSeqV5,112 transMapRnaV5,112 transMapV5,218 gapless chainHg38,653 chainNetHg38,656 chainNetTarSyr2,656 chainTarSyr2,653 netHg38,653 netTarSyr2,653 gaps chainHg38,84 chainHg38,95 chainHg38,108 chainHg38,142 chainHg38,168 chainHg38,215 chainHg38,226 chainHg38,411 chainHg38,433 chainHg38,460 chainHg38,896 chainHg38,902 chainNetHg38,87 chainNetHg38,98 chainNetHg38,111 chainNetHg38,145 chainNetHg38,171 chainNetHg38,218 chainNetHg38,229 chainNetHg38,414 chainNetHg38,436 chainNetHg38,463 chainNetHg38,899 chainNetHg38,905 chainNetTarSyr2,87 chainNetTarSyr2,98 chainNetTarSyr2,111 chainNetTarSyr2,145 chainNetTarSyr2,171 chainNetTarSyr2,218 chainNetTarSyr2,229 chainNetTarSyr2,414 chainNetTarSyr2,436 chainNetTarSyr2,463 chainNetTarSyr2,899 chainNetTarSyr2,905 chainTarSyr2,84 chainTarSyr2,95 chainTarSyr2,108 chainTarSyr2,142 chainTarSyr2,168 chainTarSyr2,215 chainTarSyr2,226 chainTarSyr2,411 chainTarSyr2,433 chainTarSyr2,460 chainTarSyr2,896 chainTarSyr2,902 gap,12 gap,44 gap,69 gap,125 gap,127 gold,97 netHg38,84 netHg38,95 netHg38,108 netHg38,142 netHg38,168 netHg38,215 netHg38,226 netHg38,411 netHg38,433 netHg38,460 netHg38,896 netHg38,902 netTarSyr2,84 netTarSyr2,95 netTarSyr2,108 netTarSyr2,142 netTarSyr2,168 netTarSyr2,215 netTarSyr2,226 netTarSyr2,411 netTarSyr2,433 netTarSyr2,460 netTarSyr2,896 netTarSyr2,902 refSeqComposite,937 refSeqComposite,1028 gardiner-garden cpgIslandExt,376 cpgIslandExt,604 cpgIslandExtUnmasked,379 cpgIslandExtUnmasked,607 cpgIslandSuper,376 cpgIslandSuper,604 gary microsat,111 simpleRepeat,71 gasteiger uniprot,2020 gattiker uniprot,2016 gbdb refSeqComposite,1558 transMapEnsemblV5,667 transMapEstV5,636 transMapRefSeqV5,636 transMapRnaV5,636 transMapV5,742 uniprot,1815 gc cpgIslandExt,262 cpgIslandExtUnmasked,265 cpgIslandSuper,262 gc5BaseBw,1 gc5BaseBw,3 gc5BaseBw,13 gc5BaseBw,30 genbank transMapEnsemblV5,173 transMapEnsemblV5,176 transMapEstV5,16 transMapEstV5,142 transMapEstV5,145 transMapRefSeqV5,142 transMapRefSeqV5,145 transMapRnaV5,4 transMapRnaV5,17 transMapRnaV5,142 transMapRnaV5,145 transMapV5,248 transMapV5,251 uniprot,376 gencode transMapEnsemblV5,6 transMapEnsemblV5,18 transMapEnsemblV5,38 transMapEnsemblV5,713 transMapEstV5,682 transMapRefSeqV5,682 transMapRnaV5,682 transMapV5,788 uniprot,730 gene augustusGene,5 augustusGene,10 augustusGene,40 augustusGene,112 augustusGene,157 augustusGene,163 augustusGene,305 augustusGene,320 cpgIslandExt,145 cpgIslandExtUnmasked,148 cpgIslandSuper,145 ensGene,7 ensGene,11 ensGene,23 ensGene,39 ensGene,58 ensGene,155 genscan,4 genscan,8 genscan,55 genscan,72 genscan,111 genscan,117 genscan,214 ncbiRefSeq,17 ncbiRefSeqGenomicDiff,14 ncbiRefSeqOther,17 ncbiRefSeqPredicted,13 ncbiRefSeqPsl,9 refSeqComposite,9 refSeqComposite,110 refSeqComposite,136 refSeqComposite,412 refSeqComposite,548 refSeqComposite,566 refSeqComposite,607 refSeqComposite,775 refSeqComposite,793 refSeqComposite,805 refSeqComposite,836 refSeqComposite,865 transMapEnsemblV5,12 transMapEnsemblV5,53 transMapEnsemblV5,59 transMapEnsemblV5,396 transMapEnsemblV5,779 transMapEstV5,10 transMapEstV5,365 transMapEstV5,748 transMapRefSeqV5,5 transMapRefSeqV5,11 transMapRefSeqV5,18 transMapRefSeqV5,365 transMapRefSeqV5,748 transMapRnaV5,11 transMapRnaV5,365 transMapRnaV5,748 transMapV5,9 transMapV5,17 transMapV5,471 transMapV5,854 unipAliSwissprot,20 unipAliTrembl,12 unipChain,10 unipConflict,8 unipDisulfBond,8 unipDomain,6 unipInterest,8 unipLocCytopl,7 unipLocExtra,7 unipLocSignal,8 unipLocTransMemb,7 unipModif,9 unipMut,8 unipOther,8 unipRepeat,6 unipStruct,10 uniprot,9 uniprot,732 uniprot,1025 uniprot,1050 uniprot,1059 uniprot,1080 uniprot,1281 uniprot,1394 xenoRefGene,10 xenoRefGene,56 xenoRefGene,110 xenoRefGene,125 xenoRefGene,130 xenoRefGene,158 xenoRefGene,187 gene-rich gc5BaseBw,36 genedx uniprot,1973 genepred ensGene,76 refSeqComposite,1181 refSeqComposite,1412 refSeqComposite,1587 genepredtogtf refSeqComposite,1599 refSeqComposite,1622 refSeqComposite,1629 generally rmsk,72 uniprot,248 generate nestedRepeats,261 nestedRepeats,320 rmsk,343 generated cpgIslandExt,588 cpgIslandExtUnmasked,591 cpgIslandSuper,588 ensGene,14 nestedRepeats,282 refSeqComposite,487 refSeqComposite,1207 refSeqComposite,1725 rmsk,289 xenoRefGene,294 generating augustusGene,189 genes augustusGene,8 augustusGene,44 cpgIslandExt,20 cpgIslandExt,23 cpgIslandExtUnmasked,23 cpgIslandExtUnmasked,26 cpgIslandSuper,20 cpgIslandSuper,23 ensGene,2 ensGene,4 ensGene,5 ensGene,27 ensGene,92 genscan,2 genscan,6 genscan,59 ncbiRefSeq,5 ncbiRefSeq,15 ncbiRefSeqGenomicDiff,12 ncbiRefSeqOther,15 ncbiRefSeqPredicted,5 ncbiRefSeqPredicted,11 ncbiRefSeqPsl,7 refSeqComposite,4 refSeqComposite,7 refSeqComposite,15 refSeqComposite,25 refSeqComposite,140 refSeqComposite,239 refSeqComposite,433 refSeqComposite,514 refSeqComposite,1219 refSeqComposite,1230 simpleRepeat,41 transMapEnsemblV5,10 transMapEnsemblV5,88 transMapEnsemblV5,172 transMapEnsemblV5,186 transMapEnsemblV5,294 transMapEnsemblV5,809 transMapEstV5,8 transMapEstV5,57 transMapEstV5,141 transMapEstV5,155 transMapEstV5,263 transMapEstV5,778 transMapRefSeqV5,9 transMapRefSeqV5,57 transMapRefSeqV5,141 transMapRefSeqV5,155 transMapRefSeqV5,263 transMapRefSeqV5,778 transMapRnaV5,9 transMapRnaV5,57 transMapRnaV5,141 transMapRnaV5,155 transMapRnaV5,263 transMapRnaV5,778 transMapV5,7 transMapV5,58 transMapV5,74 transMapV5,247 transMapV5,261 transMapV5,369 transMapV5,884 unipAliSwissprot,18 unipAliTrembl,10 unipChain,8 unipConflict,6 unipDisulfBond,6 unipDomain,4 unipInterest,6 unipLocCytopl,5 unipLocExtra,5 unipLocSignal,6 unipLocTransMemb,5 unipModif,7 unipMut,6 unipOther,6 unipRepeat,4 unipStruct,8 uniprot,7 uniprot,1300 xenoRefGene,7 xenoRefGene,8 xenoRefGene,20 xenoRefGene,196 xenoRefGene,204 xenoRefGene,215 genet nestedRepeats,354 nestedRepeats,386 nestedRepeats,408 rmsk,377 rmsk,409 rmsk,431 genetic nestedRepeats,52 rmsk,88 genome augustusGene,31 chainHg38,19 chainHg38,75 chainHg38,210 chainHg38,287 chainHg38,300 chainHg38,795 chainHg38,1116 chainNetHg38,22 chainNetHg38,78 chainNetHg38,213 chainNetHg38,290 chainNetHg38,303 chainNetHg38,798 chainNetHg38,1119 chainNetTarSyr2,22 chainNetTarSyr2,78 chainNetTarSyr2,213 chainNetTarSyr2,290 chainNetTarSyr2,303 chainNetTarSyr2,798 chainNetTarSyr2,1119 chainTarSyr2,19 chainTarSyr2,75 chainTarSyr2,210 chainTarSyr2,287 chainTarSyr2,300 chainTarSyr2,795 chainTarSyr2,1116 cpgIslandExt,164 cpgIslandExt,302 cpgIslandExtUnmasked,167 cpgIslandExtUnmasked,305 cpgIslandSuper,164 cpgIslandSuper,302 ensGene,164 ensGene,192 gap,20 gap,22 gold,22 gold,24 gold,152 ncbiRefSeqGenomicDiff,11 nestedRepeats,405 netHg38,19 netHg38,75 netHg38,210 netHg38,287 netHg38,300 netHg38,795 netHg38,1116 netTarSyr2,19 netTarSyr2,75 netTarSyr2,210 netTarSyr2,287 netTarSyr2,300 netTarSyr2,795 netTarSyr2,1116 refSeqComposite,58 refSeqComposite,292 refSeqComposite,300 refSeqComposite,309 refSeqComposite,327 refSeqComposite,371 refSeqComposite,446 refSeqComposite,470 refSeqComposite,504 refSeqComposite,885 refSeqComposite,932 refSeqComposite,982 refSeqComposite,1068 refSeqComposite,1081 refSeqComposite,1115 refSeqComposite,1128 refSeqComposite,1190 refSeqComposite,1241 refSeqComposite,1455 refSeqComposite,1744 rmsk,428 transMapEnsemblV5,36 transMapEnsemblV5,165 transMapEnsemblV5,182 transMapEnsemblV5,208 transMapEnsemblV5,339 transMapEnsemblV5,350 transMapEnsemblV5,411 transMapEnsemblV5,421 transMapEnsemblV5,455 transMapEnsemblV5,478 transMapEnsemblV5,611 transMapEnsemblV5,749 transMapEstV5,34 transMapEstV5,134 transMapEstV5,151 transMapEstV5,177 transMapEstV5,308 transMapEstV5,319 transMapEstV5,380 transMapEstV5,390 transMapEstV5,424 transMapEstV5,447 transMapEstV5,580 transMapEstV5,718 transMapRefSeqV5,34 transMapRefSeqV5,134 transMapRefSeqV5,151 transMapRefSeqV5,177 transMapRefSeqV5,308 transMapRefSeqV5,319 transMapRefSeqV5,380 transMapRefSeqV5,390 transMapRefSeqV5,424 transMapRefSeqV5,447 transMapRefSeqV5,580 transMapRefSeqV5,718 transMapRnaV5,34 transMapRnaV5,134 transMapRnaV5,151 transMapRnaV5,177 transMapRnaV5,308 transMapRnaV5,319 transMapRnaV5,380 transMapRnaV5,390 transMapRnaV5,424 transMapRnaV5,447 transMapRnaV5,580 transMapRnaV5,718 transMapV5,33 transMapV5,86 transMapV5,240 transMapV5,257 transMapV5,283 transMapV5,414 transMapV5,425 transMapV5,486 transMapV5,496 transMapV5,530 transMapV5,553 transMapV5,686 transMapV5,824 ucscToINSDC,18 ucscToRefSeq,13 unipAliSwissprot,9 unipAliTrembl,9 uniprot,88 uniprot,103 uniprot,120 uniprot,203 uniprot,216 uniprot,609 uniprot,642 uniprot,717 uniprot,749 uniprot,803 uniprot,811 uniprot,910 uniprot,1141 uniprot,1377 uniprot,1494 uniprot,1520 uniprot,1543 uniprot,1730 uniprot,1847 uniprot,1858 uniprot,1891 xenoRefGene,229 xenoRefGene,312 genome-wide refSeqComposite,1507 genome.bed uniprot,1935 uniprot,1937 genomes chainHg38,25 chainHg38,596 chainHg38,1078 chainNetHg38,28 chainNetHg38,599 chainNetHg38,1081 chainNetTarSyr2,28 chainNetTarSyr2,599 chainNetTarSyr2,1081 chainTarSyr2,25 chainTarSyr2,596 chainTarSyr2,1078 cpgIslandExt,612 cpgIslandExtUnmasked,615 cpgIslandSuper,612 nestedRepeats,369 nestedRepeats,383 netHg38,25 netHg38,596 netHg38,1078 netTarSyr2,25 netTarSyr2,596 netTarSyr2,1078 refSeqComposite,577 refSeqComposite,1813 rmsk,392 rmsk,406 transMapEnsemblV5,367 transMapEnsemblV5,375 transMapEstV5,336 transMapEstV5,344 transMapRefSeqV5,336 transMapRefSeqV5,344 transMapRnaV5,336 transMapRnaV5,344 transMapV5,442 transMapV5,450 uniprot,863 uniprot,941 windowmaskerSdust,105 xenoRefGene,381 genomic chainHg38,503 chainHg38,1030 chainHg38,1046 chainNetHg38,506 chainNetHg38,1033 chainNetHg38,1049 chainNetTarSyr2,506 chainNetTarSyr2,1033 chainNetTarSyr2,1049 chainTarSyr2,503 chainTarSyr2,1030 chainTarSyr2,1046 genscan,92 genscan,218 netHg38,503 netHg38,1030 netHg38,1046 netTarSyr2,503 netTarSyr2,1030 netTarSyr2,1046 refSeqComposite,844 refSeqComposite,912 refSeqComposite,936 refSeqComposite,1027 refSeqComposite,1085 refSeqComposite,1291 transMapEnsemblV5,129 transMapEstV5,98 transMapRefSeqV5,98 transMapRnaV5,98 transMapV5,204 uniprot,28 uniprot,450 windowmaskerSdust,3 xenoRefGene,166 xenoRefGene,279 genomics chainHg38,11 chainNetHg38,14 chainNetHg38Viewchain,12 chainNetHg38Viewnet,12 chainNetTarSyr2,14 chainNetTarSyr2Viewchain,12 chainNetTarSyr2Viewnet,12 chainTarSyr2,11 netHg38,11 netTarSyr2,11 transMapEnsemblV5,748 transMapEnsemblV5,803 transMapEstV5,717 transMapEstV5,772 transMapRefSeqV5,717 transMapRefSeqV5,772 transMapRnaV5,717 transMapRnaV5,772 transMapV5,823 transMapV5,878 genscan genscan,1 genscan,3 genscan,17 genscan,136 genscan,177 gertz windowmaskerSdust,92 gff refSeqComposite,1174 giri nestedRepeats,56 nestedRepeats,310 rmsk,92 rmsk,333 github uniprot,1559 give transMapEnsemblV5,443 transMapEstV5,412 transMapRefSeqV5,412 transMapRnaV5,412 transMapV5,518 given refSeqComposite,1547 transMapEnsemblV5,487 transMapEnsemblV5,660 transMapEstV5,456 transMapEstV5,629 transMapRefSeqV5,456 transMapRefSeqV5,629 transMapRnaV5,456 transMapRnaV5,629 transMapV5,562 transMapV5,735 uniprot,741 uniprot,1235 uniprot,1240 uniprot,1808 global transMapEnsemblV5,360 transMapEstV5,329 transMapRefSeqV5,329 transMapRnaV5,329 transMapV5,435 glyco uniprot,469 glycosylation uniprot,341 uniprot,584 gnomon refSeqComposite,376 go genscan,113 refSeqComposite,861 uniprot,1412 xenoRefGene,183 gold gold,92 gold,106 golden chainHg38,72 chainHg38,100 chainHg38,159 chainHg38,207 chainHg38,275 chainHg38,284 chainHg38,585 chainHg38,639 chainNetHg38,75 chainNetHg38,103 chainNetHg38,162 chainNetHg38,210 chainNetHg38,278 chainNetHg38,287 chainNetHg38,588 chainNetHg38,642 chainNetTarSyr2,75 chainNetTarSyr2,103 chainNetTarSyr2,162 chainNetTarSyr2,210 chainNetTarSyr2,278 chainNetTarSyr2,287 chainNetTarSyr2,588 chainNetTarSyr2,642 chainTarSyr2,72 chainTarSyr2,100 chainTarSyr2,159 chainTarSyr2,207 chainTarSyr2,275 chainTarSyr2,284 chainTarSyr2,585 chainTarSyr2,639 gap,17 gold,19 netHg38,72 netHg38,100 netHg38,159 netHg38,207 netHg38,275 netHg38,284 netHg38,585 netHg38,639 netTarSyr2,72 netTarSyr2,100 netTarSyr2,159 netTarSyr2,207 netTarSyr2,275 netTarSyr2,284 netTarSyr2,585 netTarSyr2,639 refSeqComposite,19 refSeqComposite,443 refSeqComposite,466 refSeqComposite,501 refSeqComposite,1238 transMapEnsemblV5,90 transMapEnsemblV5,204 transMapEnsemblV5,336 transMapEstV5,59 transMapEstV5,173 transMapEstV5,305 transMapRefSeqV5,59 transMapRefSeqV5,173 transMapRefSeqV5,305 transMapRnaV5,59 transMapRnaV5,173 transMapRnaV5,305 transMapV5,60 transMapV5,279 transMapV5,411 xenoRefGene,25 xenoRefGene,226 goldenpath uniprot,1907 gr refSeqComposite,1758 xenoRefGene,326 graph gc5BaseBw,59 gc5BaseBw,78 graphical chainHg38,450 chainNetHg38,453 chainNetTarSyr2,453 chainTarSyr2,450 gold,131 netHg38,450 netTarSyr2,450 rmsk,211 grch38 chainHg38,6 chainHg38,68 chainHg38,314 chainNetHg38,7 chainNetHg38,71 chainNetHg38,317 chainNetHg38Viewchain,5 chainNetHg38Viewnet,5 netHg38,6 netHg38,68 netHg38,314 greater cpgIslandExt,267 cpgIslandExt,269 cpgIslandExt,274 cpgIslandExtUnmasked,270 cpgIslandExtUnmasked,272 cpgIslandExtUnmasked,277 cpgIslandSuper,267 cpgIslandSuper,269 cpgIslandSuper,274 green cpgIslandExt,10 cpgIslandExtUnmasked,13 cpgIslandSuper,10 nestedRepeats,328 rmsk,351 uniprot,588 uniprot,593 group augustusGene,198 augustusGene,235 chainHg38,645 chainNetHg38,648 chainNetTarSyr2,648 chainTarSyr2,645 netHg38,645 netTarSyr2,645 refSeqComposite,389 refSeqComposite,451 uniprot,430 groups augustusGene,194 gs cpgIslandExt,294 cpgIslandExtUnmasked,297 cpgIslandSuper,294 gt cpgIslandExt,422 cpgIslandExt,488 cpgIslandExtUnmasked,425 cpgIslandExtUnmasked,491 cpgIslandSuper,422 cpgIslandSuper,488 uniprot,907 uniprot,909 uniprot,1930 gtf ensGene,96 refSeqComposite,1573 refSeqComposite,1583 refSeqComposite,1595 guanine cpgIslandExt,52 cpgIslandExtUnmasked,55 cpgIslandSuper,52 gc5BaseBw,21 h uniprot,2013 had transMapEnsemblV5,196 transMapEstV5,165 transMapRefSeqV5,165 transMapRnaV5,165 transMapV5,271 haeussler uniprot,1945 handful uniprot,1180 haplotype uniprot,852 hard cpgIslandExt,416 cpgIslandExtUnmasked,419 cpgIslandSuper,416 hardison chainHg38,949 chainHg38,1106 chainNetHg38,952 chainNetHg38,1109 chainNetTarSyr2,952 chainNetTarSyr2,1109 chainTarSyr2,949 chainTarSyr2,1106 netHg38,949 netHg38,1106 netTarSyr2,949 netTarSyr2,1106 harris chainHg38,1023 chainNetHg38,1026 chainNetTarSyr2,1026 chainTarSyr2,1023 netHg38,1023 netTarSyr2,1023 hart refSeqComposite,1769 xenoRefGene,337 has nestedRepeats,246 refSeqComposite,621 refSeqComposite,642 refSeqComposite,678 refSeqComposite,690 refSeqComposite,703 refSeqComposite,822 transMapV5,147 uniprot,33 uniprot,46 uniprot,154 uniprot,606 uniprot,1195 uniprot,1232 uniprot,1381 xenoRefGene,70 haussler augustusGene,292 chainHg38,984 chainHg38,1064 chainHg38,1108 chainNetHg38,987 chainNetHg38,1067 chainNetHg38,1111 chainNetTarSyr2,987 chainNetTarSyr2,1067 chainNetTarSyr2,1111 chainTarSyr2,984 chainTarSyr2,1064 chainTarSyr2,1108 netHg38,984 netHg38,1064 netHg38,1108 netTarSyr2,984 netTarSyr2,1064 netTarSyr2,1108 transMapEnsemblV5,766 transMapEnsemblV5,800 transMapEstV5,735 transMapEstV5,769 transMapRefSeqV5,735 transMapRefSeqV5,769 transMapRnaV5,735 transMapRnaV5,769 transMapV5,841 transMapV5,875 have chainHg38,579 chainNetHg38,582 chainNetTarSyr2,582 chainTarSyr2,579 nestedRepeats,88 netHg38,579 netTarSyr2,579 rmsk,69 rmsk,108 uniprot,170 uniprot,302 uniprot,942 uniprot,1000 uniprot,1042 uniprot,1444 having cpgIslandExt,138 cpgIslandExtUnmasked,141 cpgIslandSuper,138 refSeqComposite,1264 refSeqComposite,1273 xenoRefGene,252 xenoRefGene,261 heavily uniprot,1533 helices uniprot,366 help cpgIslandExt,546 cpgIslandExtUnmasked,549 cpgIslandSuper,546 ensGene,126 gc5BaseBw,61 refSeqComposite,126 helps cpgIslandExt,74 cpgIslandExtUnmasked,77 cpgIslandSuper,74 here refSeqComposite,998 refSeqComposite,1201 refSeqComposite,1474 refSeqComposite,1496 refSeqComposite,1690 rmsk,127 transMapEnsemblV5,138 transMapEnsemblV5,152 transMapEnsemblV5,647 transMapEstV5,107 transMapEstV5,121 transMapEstV5,616 transMapRefSeqV5,107 transMapRefSeqV5,121 transMapRefSeqV5,616 transMapRnaV5,107 transMapRnaV5,121 transMapRnaV5,616 transMapV5,213 transMapV5,227 transMapV5,722 uniprot,1795 hg.conf refSeqComposite,1645 hg19 refSeqComposite,578 uniprot,847 uniprot,860 hg38 chainHg38,7 chainHg38,69 chainHg38,315 chainNetHg38,8 chainNetHg38,72 chainNetHg38,318 chainNetHg38Viewchain,6 chainNetHg38Viewnet,6 netHg38,7 netHg38,69 netHg38,315 refSeqComposite,522 refSeqComposite,580 uniprot,700 uniprot,843 uniprot,1177 uniprot,1367 uniprot,1909 hgdownload.soe.ucsc.edu cpgIslandExt,576 cpgIslandExtUnmasked,579 cpgIslandSuper,576 refSeqComposite,1557 transMapEnsemblV5,666 transMapEstV5,635 transMapRefSeqV5,635 transMapRnaV5,635 transMapV5,741 uniprot,1814 uniprot,1906 uniprot,1916 hgmd refSeqComposite,554 hgvs refSeqComposite,907 refSeqComposite,920 refSeqComposite,959 refSeqComposite,988 refSeqComposite,1047 refSeqComposite,1074 refSeqComposite,1078 refSeqComposite,1098 hiatt refSeqComposite,1759 xenoRefGene,327 hidden augustusGene,324 uniprot,182 uniprot,223 hide refSeqComposite,176 uniprot,659 uniprot,667 xenoRefGene,194 hierarchy chainHg38,832 chainNetHg38,835 chainNetTarSyr2,835 chainTarSyr2,832 netHg38,832 netTarSyr2,832 high gc5BaseBw,29 transMapV5,120 higher chainHg38,864 chainNetHg38,867 chainNetTarSyr2,867 chainTarSyr2,864 cpgIslandExt,157 cpgIslandExtUnmasked,160 cpgIslandSuper,157 netHg38,864 netTarSyr2,864 rmsk,230 transMapV5,148 higher-level chainHg38,881 chainNetHg38,884 chainNetTarSyr2,884 chainTarSyr2,881 netHg38,881 netTarSyr2,881 higher-scoring chainHg38,825 chainHg38,844 chainNetHg38,828 chainNetHg38,847 chainNetTarSyr2,828 chainNetTarSyr2,847 chainTarSyr2,825 chainTarSyr2,844 netHg38,825 netHg38,844 netTarSyr2,825 netTarSyr2,844 highest refSeqComposite,1266 uniprot,948 uniprot,1113 xenoRefGene,254 highest-scoring chainHg38,402 chainHg38,791 chainNetHg38,405 chainNetHg38,794 chainNetTarSyr2,405 chainNetTarSyr2,794 chainTarSyr2,402 chainTarSyr2,791 netHg38,402 netHg38,791 netTarSyr2,402 netTarSyr2,791 highlight gc5BaseBw,49 highlighted uniprot,580 highly microsat,40 hillier cpgIslandExt,601 cpgIslandExtUnmasked,604 cpgIslandSuper,601 hinrichs chainHg38,1060 chainNetHg38,1063 chainNetTarSyr2,1063 chainTarSyr2,1060 netHg38,1060 netTarSyr2,1060 hiram gc5BaseBw,82 ucscToINSDC,51 ucscToRefSeq,45 his chainHg38,958 chainNetHg38,961 chainNetTarSyr2,961 chainTarSyr2,958 netHg38,958 netTarSyr2,958 honeybee1 augustusGene,217 horizontal nestedRepeats,130 nestedRepeats,150 hou chainHg38,937 chainNetHg38,940 chainNetTarSyr2,940 chainTarSyr2,937 netHg38,937 netTarSyr2,937 housekeeping cpgIslandExt,22 cpgIslandExtUnmasked,25 cpgIslandSuper,22 how chainHg38,892 chainHg38,909 chainNetHg38,895 chainNetHg38,912 chainNetTarSyr2,895 chainNetTarSyr2,912 chainTarSyr2,892 chainTarSyr2,909 netHg38,892 netHg38,909 netTarSyr2,892 netTarSyr2,909 refSeqComposite,98 rmsk,121 however cpgIslandExt,96 cpgIslandExtUnmasked,99 cpgIslandSuper,96 transMapEnsemblV5,491 transMapEstV5,460 transMapRefSeqV5,460 transMapRnaV5,460 transMapV5,566 hox refSeqComposite,416 http cpgIslandExt,575 cpgIslandExtUnmasked,578 cpgIslandSuper,575 nestedRepeats,332 refSeqComposite,1556 rmsk,355 transMapEnsemblV5,665 transMapEstV5,634 transMapRefSeqV5,634 transMapRnaV5,634 transMapV5,740 uniprot,1813 https uniprot,1905 uniprot,1915 hub uniprot,711 uniprot,1672 uniprot,1679 hubbard ensGene,44 ensGene,168 hubley nestedRepeats,308 nestedRepeats,326 rmsk,331 rmsk,349 hum uniprot,2043 human augustusGene,205 augustusGene,210 augustusGene,276 chainHg38,1 chainHg38,3 chainHg38,65 chainHg38,98 chainHg38,152 chainHg38,274 chainHg38,303 chainHg38,584 chainHg38,634 chainHg38,1077 chainNetHg38,1 chainNetHg38,4 chainNetHg38,68 chainNetHg38,101 chainNetHg38,155 chainNetHg38,277 chainNetHg38,306 chainNetHg38,587 chainNetHg38,637 chainNetHg38,1080 chainNetHg38Viewchain,2 chainNetHg38Viewnet,2 chainNetTarSyr2,1080 chainTarSyr2,1077 genscan,217 nestedRepeats,404 netHg38,1 netHg38,3 netHg38,65 netHg38,98 netHg38,152 netHg38,274 netHg38,303 netHg38,584 netHg38,634 netHg38,1077 netTarSyr2,1077 refSeqComposite,247 refSeqComposite,299 refSeqComposite,565 refSeqComposite,576 refSeqComposite,1080 rmsk,427 transMapEnsemblV5,42 transMapEnsemblV5,368 transMapEnsemblV5,477 transMapEnsemblV5,744 transMapEnsemblV5,812 transMapEstV5,337 transMapEstV5,446 transMapEstV5,713 transMapEstV5,781 transMapRefSeqV5,337 transMapRefSeqV5,446 transMapRefSeqV5,713 transMapRefSeqV5,781 transMapRnaV5,337 transMapRnaV5,446 transMapRnaV5,713 transMapRnaV5,781 transMapV5,106 transMapV5,135 transMapV5,443 transMapV5,552 transMapV5,819 transMapV5,887 uniprot,699 uniprot,940 uniprot,2040 human-mouse chainHg38,1112 chainNetHg38,1115 chainNetTarSyr2,1115 chainTarSyr2,1112 netHg38,1112 netTarSyr2,1112 icon refSeqComposite,758 id nestedRepeats,10 nestedRepeats,106 refSeqComposite,1137 uniprot,1026 uniprot,1051 uniprot,1060 uniprot,1282 identical uniprot,1106 uniprot,1144 uniprot,1147 identified chainHg38,953 chainNetHg38,956 chainNetTarSyr2,956 chainTarSyr2,953 netHg38,953 netTarSyr2,953 refSeqComposite,1270 transMapEnsemblV5,518 transMapEstV5,487 transMapRefSeqV5,487 transMapRnaV5,487 transMapV5,593 xenoRefGene,258 identifier refSeqComposite,789 refSeqComposite,808 transMapEnsemblV5,489 transMapEstV5,458 transMapRefSeqV5,458 transMapRnaV5,458 transMapV5,564 identifiers transMapEnsemblV5,390 transMapEnsemblV5,449 transMapEnsemblV5,467 transMapEstV5,359 transMapEstV5,418 transMapEstV5,436 transMapRefSeqV5,359 transMapRefSeqV5,418 transMapRefSeqV5,436 transMapRnaV5,359 transMapRnaV5,418 transMapRnaV5,436 transMapV5,465 transMapV5,524 transMapV5,542 ucscToRefSeq,19 identifying cpgIslandExt,249 cpgIslandExtUnmasked,252 cpgIslandSuper,249 identity microsat,71 nestedRepeats,187 nestedRepeats,222 refSeqComposite,1268 refSeqComposite,1276 refSeqComposite,1288 xenoRefGene,256 xenoRefGene,264 xenoRefGene,276 ideogram cytoBandIdeo,3 cytoBandIdeo,4 ids uniprot,1292 if gap,78 nestedRepeats,137 transMapEnsemblV5,248 transMapEstV5,217 transMapRefSeqV5,217 transMapRnaV5,217 transMapV5,323 uniprot,602 uniprot,688 uniprot,1030 uniprot,1077 uniprot,1230 uniprot,1261 uniprot,1323 uniprot,1442 xenoRefGene,207 ignored refSeqComposite,1461 uniprot,1426 ii215-25 augustusGene,338 immediately cpgIslandExt,48 cpgIslandExtUnmasked,51 cpgIslandSuper,48 imperfect simpleRepeat,19 important uniprot,900 improve augustusGene,302 transMapEnsemblV5,776 transMapEstV5,745 transMapRefSeqV5,745 transMapRnaV5,745 transMapV5,851 improved chainHg38,1026 chainNetHg38,1029 chainNetTarSyr2,1029 chainTarSyr2,1026 netHg38,1026 netTarSyr2,1026 in augustusGene,101 chainHg38,31 chainHg38,96 chainHg38,118 chainHg38,150 chainHg38,157 chainHg38,173 chainHg38,192 chainHg38,195 chainHg38,236 chainHg38,257 chainHg38,306 chainHg38,339 chainHg38,369 chainHg38,381 chainHg38,390 chainHg38,408 chainHg38,413 chainHg38,422 chainHg38,434 chainHg38,448 chainHg38,490 chainHg38,507 chainHg38,538 chainHg38,556 chainHg38,570 chainHg38,607 chainHg38,705 chainHg38,793 chainHg38,834 chainHg38,842 chainHg38,858 chainHg38,891 chainHg38,903 chainHg38,1073 chainNetHg38,34 chainNetHg38,99 chainNetHg38,121 chainNetHg38,153 chainNetHg38,160 chainNetHg38,176 chainNetHg38,195 chainNetHg38,198 chainNetHg38,239 chainNetHg38,260 chainNetHg38,309 chainNetHg38,342 chainNetHg38,372 chainNetHg38,384 chainNetHg38,393 chainNetHg38,411 chainNetHg38,416 chainNetHg38,425 chainNetHg38,437 chainNetHg38,451 chainNetHg38,493 chainNetHg38,510 chainNetHg38,541 chainNetHg38,559 chainNetHg38,573 chainNetHg38,610 chainNetHg38,708 chainNetHg38,796 chainNetHg38,837 chainNetHg38,845 chainNetHg38,861 chainNetHg38,894 chainNetHg38,906 chainNetHg38,1076 chainNetTarSyr2,34 chainNetTarSyr2,99 chainNetTarSyr2,121 chainNetTarSyr2,153 chainNetTarSyr2,160 chainNetTarSyr2,176 chainNetTarSyr2,195 chainNetTarSyr2,198 chainNetTarSyr2,239 chainNetTarSyr2,260 chainNetTarSyr2,309 chainNetTarSyr2,342 chainNetTarSyr2,372 chainNetTarSyr2,384 chainNetTarSyr2,393 chainNetTarSyr2,411 chainNetTarSyr2,416 chainNetTarSyr2,425 chainNetTarSyr2,437 chainNetTarSyr2,451 chainNetTarSyr2,493 chainNetTarSyr2,510 chainNetTarSyr2,541 chainNetTarSyr2,559 chainNetTarSyr2,573 chainNetTarSyr2,610 chainNetTarSyr2,708 chainNetTarSyr2,796 chainNetTarSyr2,837 chainNetTarSyr2,845 chainNetTarSyr2,861 chainNetTarSyr2,894 chainNetTarSyr2,906 chainNetTarSyr2,1076 chainTarSyr2,31 chainTarSyr2,96 chainTarSyr2,118 chainTarSyr2,150 chainTarSyr2,157 chainTarSyr2,173 chainTarSyr2,192 chainTarSyr2,195 chainTarSyr2,236 chainTarSyr2,257 chainTarSyr2,306 chainTarSyr2,339 chainTarSyr2,369 chainTarSyr2,381 chainTarSyr2,390 chainTarSyr2,408 chainTarSyr2,413 chainTarSyr2,422 chainTarSyr2,434 chainTarSyr2,448 chainTarSyr2,490 chainTarSyr2,507 chainTarSyr2,538 chainTarSyr2,556 chainTarSyr2,570 chainTarSyr2,607 chainTarSyr2,705 chainTarSyr2,793 chainTarSyr2,834 chainTarSyr2,842 chainTarSyr2,858 chainTarSyr2,891 chainTarSyr2,903 chainTarSyr2,1073 cpgIslandExt,24 cpgIslandExt,58 cpgIslandExt,64 cpgIslandExt,87 cpgIslandExt,180 cpgIslandExt,189 cpgIslandExt,214 cpgIslandExt,297 cpgIslandExt,341 cpgIslandExt,375 cpgIslandExt,610 cpgIslandExtUnmasked,27 cpgIslandExtUnmasked,61 cpgIslandExtUnmasked,67 cpgIslandExtUnmasked,90 cpgIslandExtUnmasked,183 cpgIslandExtUnmasked,192 cpgIslandExtUnmasked,217 cpgIslandExtUnmasked,300 cpgIslandExtUnmasked,344 cpgIslandExtUnmasked,378 cpgIslandExtUnmasked,613 cpgIslandSuper,24 cpgIslandSuper,58 cpgIslandSuper,64 cpgIslandSuper,87 cpgIslandSuper,180 cpgIslandSuper,189 cpgIslandSuper,214 cpgIslandSuper,297 cpgIslandSuper,341 cpgIslandSuper,375 cpgIslandSuper,610 ensGene,37 ensGene,50 ensGene,83 ensGene,90 ensGene,95 gap,13 gap,27 gap,45 gap,75 gap,130 gc5BaseBw,5 gc5BaseBw,26 gc5BaseBw,43 genscan,101 genscan,150 genscan,162 genscan,165 genscan,184 genscan,188 genscan,198 genscan,216 gold,15 gold,29 gold,68 gold,129 gold,140 gold,148 microsat,42 microsat,49 nestedRepeats,61 nestedRepeats,64 nestedRepeats,75 nestedRepeats,115 nestedRepeats,156 nestedRepeats,167 nestedRepeats,241 nestedRepeats,339 nestedRepeats,367 nestedRepeats,381 nestedRepeats,402 netHg38,31 netHg38,96 netHg38,118 netHg38,150 netHg38,157 netHg38,173 netHg38,192 netHg38,195 netHg38,236 netHg38,257 netHg38,306 netHg38,339 netHg38,369 netHg38,381 netHg38,390 netHg38,408 netHg38,413 netHg38,422 netHg38,434 netHg38,448 netHg38,490 netHg38,507 netHg38,538 netHg38,556 netHg38,570 netHg38,607 netHg38,705 netHg38,793 netHg38,834 netHg38,842 netHg38,858 netHg38,891 netHg38,903 netHg38,1073 netTarSyr2,31 netTarSyr2,96 netTarSyr2,118 netTarSyr2,150 netTarSyr2,157 netTarSyr2,173 netTarSyr2,192 netTarSyr2,195 netTarSyr2,236 netTarSyr2,257 netTarSyr2,306 netTarSyr2,339 netTarSyr2,369 netTarSyr2,381 netTarSyr2,390 netTarSyr2,408 netTarSyr2,413 netTarSyr2,422 netTarSyr2,434 netTarSyr2,448 netTarSyr2,490 netTarSyr2,507 netTarSyr2,538 netTarSyr2,556 netTarSyr2,570 netTarSyr2,607 netTarSyr2,705 netTarSyr2,793 netTarSyr2,834 netTarSyr2,842 netTarSyr2,858 netTarSyr2,891 netTarSyr2,903 netTarSyr2,1073 refSeqComposite,63 refSeqComposite,279 refSeqComposite,398 refSeqComposite,764 refSeqComposite,996 refSeqComposite,1043 refSeqComposite,1070 refSeqComposite,1147 refSeqComposite,1173 refSeqComposite,1188 refSeqComposite,1259 refSeqComposite,1306 refSeqComposite,1350 refSeqComposite,1365 refSeqComposite,1374 refSeqComposite,1384 refSeqComposite,1394 refSeqComposite,1453 refSeqComposite,1462 refSeqComposite,1477 refSeqComposite,1485 refSeqComposite,1545 refSeqComposite,1630 refSeqComposite,1667 refSeqComposite,1673 rmsk,45 rmsk,63 rmsk,97 rmsk,100 rmsk,128 rmsk,139 rmsk,209 rmsk,270 rmsk,317 rmsk,362 rmsk,390 rmsk,404 rmsk,425 transMapEnsemblV5,33 transMapEnsemblV5,82 transMapEnsemblV5,89 transMapEnsemblV5,162 transMapEnsemblV5,341 transMapEnsemblV5,365 transMapEnsemblV5,373 transMapEnsemblV5,408 transMapEnsemblV5,418 transMapEnsemblV5,452 transMapEnsemblV5,498 transMapEnsemblV5,548 transMapEnsemblV5,590 transMapEstV5,31 transMapEstV5,51 transMapEstV5,58 transMapEstV5,131 transMapEstV5,310 transMapEstV5,334 transMapEstV5,342 transMapEstV5,377 transMapEstV5,387 transMapEstV5,421 transMapEstV5,467 transMapEstV5,517 transMapEstV5,559 transMapRefSeqV5,31 transMapRefSeqV5,51 transMapRefSeqV5,58 transMapRefSeqV5,131 transMapRefSeqV5,310 transMapRefSeqV5,334 transMapRefSeqV5,342 transMapRefSeqV5,377 transMapRefSeqV5,387 transMapRefSeqV5,421 transMapRefSeqV5,467 transMapRefSeqV5,517 transMapRefSeqV5,559 transMapRnaV5,31 transMapRnaV5,51 transMapRnaV5,58 transMapRnaV5,131 transMapRnaV5,310 transMapRnaV5,334 transMapRnaV5,342 transMapRnaV5,377 transMapRnaV5,387 transMapRnaV5,421 transMapRnaV5,467 transMapRnaV5,517 transMapRnaV5,559 transMapV5,30 transMapV5,52 transMapV5,59 transMapV5,78 transMapV5,237 transMapV5,416 transMapV5,440 transMapV5,448 transMapV5,483 transMapV5,493 transMapV5,527 transMapV5,573 transMapV5,623 transMapV5,665 uniprot,67 uniprot,148 uniprot,161 uniprot,177 uniprot,242 uniprot,291 uniprot,313 uniprot,427 uniprot,505 uniprot,509 uniprot,570 uniprot,581 uniprot,586 uniprot,591 uniprot,737 uniprot,755 uniprot,854 uniprot,870 uniprot,882 uniprot,1066 uniprot,1132 uniprot,1151 uniprot,1171 uniprot,1190 uniprot,1199 uniprot,1252 uniprot,1258 uniprot,1272 uniprot,1466 uniprot,1637 uniprot,1663 uniprot,1734 uniprot,1752 uniprot,1849 uniprot,1864 windowmaskerSdust,27 xenoRefGene,247 include refSeqComposite,189 rmsk,159 rmsk,172 included augustusGene,160 cpgIslandExt,306 cpgIslandExtUnmasked,309 cpgIslandSuper,306 windowmaskerSdust,26 includes refSeqComposite,218 refSeqComposite,264 refSeqComposite,348 refSeqComposite,656 rmsk,198 uniprot,1587 including refSeqComposite,803 rmsk,188 uniprot,1700 inclusion refSeqComposite,397 inconsistency refSeqComposite,881 incorporate refSeqComposite,668 incorrect uniprot,1361 indels microsat,74 independently refSeqComposite,295 indexing refSeqComposite,1472 indicate chainHg38,141 chainHg38,251 chainNetHg38,144 chainNetHg38,254 chainNetTarSyr2,144 chainNetTarSyr2,254 chainTarSyr2,141 chainTarSyr2,251 nestedRepeats,153 netHg38,141 netHg38,251 netTarSyr2,141 netTarSyr2,251 indicates refSeqComposite,613 xenoRefGene,62 individual chainHg38,248 chainHg38,505 chainNetHg38,251 chainNetHg38,508 chainNetTarSyr2,251 chainNetTarSyr2,508 chainTarSyr2,248 chainTarSyr2,505 netHg38,248 netHg38,505 netTarSyr2,248 netTarSyr2,505 refSeqComposite,684 refSeqComposite,709 refSeqComposite,753 refSeqComposite,1500 transMapEnsemblV5,606 transMapEstV5,575 transMapRefSeqV5,575 transMapRnaV5,575 transMapV5,681 information augustusGene,36 chainHg38,468 chainHg38,481 chainHg38,487 chainHg38,859 chainNetHg38,471 chainNetHg38,484 chainNetHg38,490 chainNetHg38,862 chainNetTarSyr2,471 chainNetTarSyr2,484 chainNetTarSyr2,490 chainNetTarSyr2,862 chainTarSyr2,468 chainTarSyr2,481 chainTarSyr2,487 chainTarSyr2,859 cpgIslandExt,542 cpgIslandExtUnmasked,545 cpgIslandSuper,542 ensGene,19 ensGene,159 gap,36 gc5BaseBw,55 genscan,51 genscan,126 gold,38 microsat,97 nestedRepeats,53 nestedRepeats,301 netHg38,468 netHg38,481 netHg38,487 netHg38,859 netTarSyr2,468 netTarSyr2,481 netTarSyr2,487 netTarSyr2,859 refSeqComposite,132 refSeqComposite,673 refSeqComposite,857 refSeqComposite,1192 refSeqComposite,1389 refSeqComposite,1393 rmsk,89 rmsk,324 simpleRepeat,58 transMapEnsemblV5,133 transMapEnsemblV5,150 transMapEnsemblV5,572 transMapEstV5,102 transMapEstV5,119 transMapEstV5,541 transMapRefSeqV5,102 transMapRefSeqV5,119 transMapRefSeqV5,541 transMapRnaV5,102 transMapRnaV5,119 transMapRnaV5,541 transMapV5,208 transMapV5,225 transMapV5,647 uniprot,678 uniprot,1842 uniprot,2038 xenoRefGene,179 initial refSeqComposite,687 initiate rmsk,316 initio augustusGene,4 augustusGene,17 input uniprot,1952 windowmaskerSdust,61 windowmaskerSdust,70 insdc ucscToINSDC,1 ucscToINSDC,4 ucscToINSDC,32 inserted chainHg38,581 chainHg38,915 chainNetHg38,584 chainNetHg38,918 chainNetTarSyr2,584 chainNetTarSyr2,918 chainTarSyr2,581 chainTarSyr2,915 netHg38,581 netHg38,915 netTarSyr2,581 netTarSyr2,915 insertion chainHg38,156 chainNetHg38,159 chainNetTarSyr2,159 chainTarSyr2,156 netHg38,156 netTarSyr2,156 rmsk,223 insertions nestedRepeats,86 nestedRepeats,92 refSeqComposite,953 inside uniprot,560 inspection uniprot,1653 instead refSeqComposite,790 xenoRefGene,122 institute nestedRepeats,55 rmsk,91 instructions ensGene,117 transMapEnsemblV5,637 transMapEstV5,606 transMapRefSeqV5,606 transMapRnaV5,606 transMapV5,712 uniprot,1785 integrator cpgIslandExt,526 cpgIslandExtUnmasked,529 cpgIslandSuper,526 ensGene,71 refSeqComposite,1322 transMapEnsemblV5,540 transMapEstV5,509 transMapRefSeqV5,509 transMapRnaV5,509 transMapV5,615 uniprot,1725 interactions uniprot,316 interactively cpgIslandExt,515 cpgIslandExtUnmasked,518 cpgIslandSuper,515 ensGene,63 refSeqComposite,1313 transMapEnsemblV5,532 transMapEstV5,501 transMapRefSeqV5,501 transMapRnaV5,501 transMapV5,607 uniprot,1717 interest unipInterest,1 unipInterest,5 uniprot,299 intergenic genscan,47 international transMapEnsemblV5,698 transMapEstV5,667 transMapRefSeqV5,667 transMapRnaV5,667 transMapV5,773 ucscToINSDC,5 ucscToINSDC,27 internet nestedRepeats,279 interrupted nestedRepeats,1 nestedRepeats,5 nestedRepeats,21 nestedRepeats,90 nestedRepeats,121 interspersed nestedRepeats,36 nestedRepeats,373 nestedRepeats,400 rmsk,26 rmsk,154 rmsk,162 rmsk,396 rmsk,423 intervals windowmaskerSdust,4 into chainHg38,613 chainHg38,625 chainHg38,643 chainHg38,818 chainNetHg38,616 chainNetHg38,628 chainNetHg38,646 chainNetHg38,821 chainNetTarSyr2,616 chainNetTarSyr2,628 chainNetTarSyr2,646 chainNetTarSyr2,821 chainTarSyr2,613 chainTarSyr2,625 chainTarSyr2,643 chainTarSyr2,818 cpgIslandExt,105 cpgIslandExtUnmasked,108 cpgIslandSuper,105 netHg38,613 netHg38,625 netHg38,643 netHg38,818 netTarSyr2,613 netTarSyr2,625 netTarSyr2,643 netTarSyr2,818 uniprot,57 windowmaskerSdust,80 intron augustusGene,88 augustusGene,330 introns chainHg38,56 chainNetHg38,59 chainNetTarSyr2,59 chainTarSyr2,56 genscan,45 netHg38,56 netTarSyr2,56 refSeqComposite,944 refSeqComposite,1035 inv chainHg38,543 chainNetHg38,546 chainNetTarSyr2,546 chainTarSyr2,543 netHg38,543 netTarSyr2,543 inversions chainHg38,114 chainHg38,180 chainNetHg38,117 chainNetHg38,183 chainNetTarSyr2,117 chainNetTarSyr2,183 chainTarSyr2,114 chainTarSyr2,180 netHg38,114 netHg38,180 netTarSyr2,114 netTarSyr2,180 inverted chainHg38,877 chainNetHg38,880 chainNetTarSyr2,880 chainTarSyr2,877 netHg38,877 netTarSyr2,877 invisible refSeqComposite,1042 refSeqComposite,1069 involve chainHg38,170 chainNetHg38,173 chainNetTarSyr2,173 chainTarSyr2,170 netHg38,170 netTarSyr2,170 is chainHg38,289 chainHg38,309 chainHg38,488 chainNetHg38,292 chainNetHg38,312 chainNetHg38,491 chainNetTarSyr2,292 chainNetTarSyr2,312 chainNetTarSyr2,491 chainTarSyr2,289 chainTarSyr2,309 chainTarSyr2,488 cpgIslandExt,56 cpgIslandExt,113 cpgIslandExt,121 cpgIslandExt,130 cpgIslandExt,160 cpgIslandExt,203 cpgIslandExt,321 cpgIslandExt,330 cpgIslandExt,335 cpgIslandExt,347 cpgIslandExt,368 cpgIslandExt,404 cpgIslandExt,494 cpgIslandExtUnmasked,59 cpgIslandExtUnmasked,116 cpgIslandExtUnmasked,124 cpgIslandExtUnmasked,133 cpgIslandExtUnmasked,163 cpgIslandExtUnmasked,206 cpgIslandExtUnmasked,324 cpgIslandExtUnmasked,333 cpgIslandExtUnmasked,338 cpgIslandExtUnmasked,350 cpgIslandExtUnmasked,371 cpgIslandExtUnmasked,407 cpgIslandExtUnmasked,497 cpgIslandSuper,56 cpgIslandSuper,113 cpgIslandSuper,121 cpgIslandSuper,130 cpgIslandSuper,160 cpgIslandSuper,203 cpgIslandSuper,321 cpgIslandSuper,330 cpgIslandSuper,335 cpgIslandSuper,347 cpgIslandSuper,368 cpgIslandSuper,404 cpgIslandSuper,494 gap,48 gap,93 gap,100 gap,108 gc5BaseBw,32 gold,47 gold,121 gold,127 microsat,88 nestedRepeats,59 nestedRepeats,123 nestedRepeats,198 nestedRepeats,219 nestedRepeats,337 netHg38,289 netHg38,309 netHg38,488 netTarSyr2,289 netTarSyr2,309 netTarSyr2,488 refSeqComposite,148 refSeqComposite,244 refSeqComposite,318 refSeqComposite,541 refSeqComposite,571 refSeqComposite,582 refSeqComposite,718 refSeqComposite,1063 refSeqComposite,1206 refSeqComposite,1221 refSeqComposite,1439 refSeqComposite,1445 rmsk,95 rmsk,360 simpleRepeat,28 transMapEnsemblV5,39 transMapEnsemblV5,279 transMapEnsemblV5,424 transMapEnsemblV5,428 transMapEnsemblV5,440 transMapEnsemblV5,486 transMapEstV5,248 transMapEstV5,393 transMapEstV5,397 transMapEstV5,409 transMapEstV5,455 transMapRefSeqV5,248 transMapRefSeqV5,393 transMapRefSeqV5,397 transMapRefSeqV5,409 transMapRefSeqV5,455 transMapRnaV5,248 transMapRnaV5,393 transMapRnaV5,397 transMapRnaV5,409 transMapRnaV5,455 transMapV5,354 transMapV5,499 transMapV5,503 transMapV5,515 transMapV5,561 uniprot,159 uniprot,222 uniprot,417 uniprot,626 uniprot,707 uniprot,839 uniprot,911 uniprot,958 uniprot,972 uniprot,1052 uniprot,1081 uniprot,1209 uniprot,1245 uniprot,1256 uniprot,1264 uniprot,1283 uniprot,1334 uniprot,1390 uniprot,1564 uniprot,1578 uniprot,1603 uniprot,1630 uniprot,1732 windowmaskerSdust,25 windowmaskerSdust,39 island cpgIslandExt,343 cpgIslandExtUnmasked,346 cpgIslandSuper,343 islands cpgIslandExt,2 cpgIslandExt,4 cpgIslandExt,5 cpgIslandExt,16 cpgIslandExt,27 cpgIslandExt,148 cpgIslandExt,177 cpgIslandExt,226 cpgIslandExt,320 cpgIslandExt,507 cpgIslandExt,609 cpgIslandExtUnmasked,4 cpgIslandExtUnmasked,8 cpgIslandExtUnmasked,19 cpgIslandExtUnmasked,30 cpgIslandExtUnmasked,151 cpgIslandExtUnmasked,180 cpgIslandExtUnmasked,229 cpgIslandExtUnmasked,323 cpgIslandExtUnmasked,510 cpgIslandExtUnmasked,612 cpgIslandSuper,2 cpgIslandSuper,4 cpgIslandSuper,5 cpgIslandSuper,16 cpgIslandSuper,27 cpgIslandSuper,148 cpgIslandSuper,177 cpgIslandSuper,226 cpgIslandSuper,320 cpgIslandSuper,507 cpgIslandSuper,609 isoform unipAliSwissprot,13 uniprot,157 uniprot,186 uniprot,671 isoforms unipAliSwissprot,17 uniprot,145 uniprot,164 issue refSeqComposite,1791 refSeqComposite,1825 uniprot,2004 xenoRefGene,359 xenoRefGene,393 it chainHg38,91 chainHg38,288 chainHg38,542 chainHg38,554 chainNetHg38,94 chainNetHg38,291 chainNetHg38,545 chainNetHg38,557 chainNetTarSyr2,94 chainNetTarSyr2,291 chainNetTarSyr2,545 chainNetTarSyr2,557 chainTarSyr2,91 chainTarSyr2,288 chainTarSyr2,542 chainTarSyr2,554 gap,99 genscan,143 netHg38,91 netHg38,288 netHg38,542 netHg38,554 netTarSyr2,91 netTarSyr2,288 netTarSyr2,542 netTarSyr2,554 refSeqComposite,581 refSeqComposite,1309 uniprot,228 uniprot,625 uniprot,1586 item nestedRepeats,197 refSeqComposite,721 xenoRefGene,79 items chainHg38,506 chainNetHg38,509 chainNetTarSyr2,509 chainTarSyr2,506 nestedRepeats,171 nestedRepeats,180 netHg38,506 netTarSyr2,506 refSeqComposite,771 refSeqComposite,970 refSeqComposite,1672 xenoRefGene,106 its cpgIslandExt,509 cpgIslandExtUnmasked,512 cpgIslandSuper,509 nestedRepeats,204 uniprot,230 uniprot,762 uniprot,1316 uniprot,1348 itself uniprot,715 j cpgIslandExt,613 cpgIslandExtUnmasked,616 cpgIslandSuper,613 ensGene,183 genscan,220 nestedRepeats,341 refSeqComposite,1770 rmsk,364 transMapEnsemblV5,791 transMapEstV5,760 transMapRefSeqV5,760 transMapRnaV5,760 transMapV5,866 xenoRefGene,338 jan chainHg38,1119 chainNetHg38,1122 chainNetTarSyr2,1122 chainTarSyr2,1119 ensGene,199 microsat,129 netHg38,1119 netTarSyr2,1119 refSeqComposite,1788 refSeqComposite,1821 simpleRepeat,89 uniprot,2001 windowmaskerSdust,108 xenoRefGene,356 xenoRefGene,389 jim chainHg38,975 chainHg38,1002 chainHg38,1020 chainNetHg38,978 chainNetHg38,1005 chainNetHg38,1023 chainNetTarSyr2,978 chainNetTarSyr2,1005 chainNetTarSyr2,1023 chainTarSyr2,975 chainTarSyr2,1002 chainTarSyr2,1020 netHg38,975 netHg38,1002 netHg38,1020 netTarSyr2,975 netTarSyr2,1002 netTarSyr2,1020 joined chainHg38,126 chainNetHg38,129 chainNetTarSyr2,129 chainTarSyr2,126 nestedRepeats,7 nestedRepeats,18 nestedRepeats,103 nestedRepeats,128 netHg38,126 netTarSyr2,126 journal nestedRepeats,349 rmsk,372 json refSeqComposite,1366 refSeqComposite,1370 jul cpgIslandExt,617 cpgIslandExtUnmasked,620 cpgIslandSuper,617 jurka nestedRepeats,62 nestedRepeats,340 rmsk,98 rmsk,363 jz transMapEnsemblV5,793 transMapEstV5,762 transMapRefSeqV5,762 transMapRnaV5,762 transMapV5,868 k augustusGene,268 k1 cpgIslandExt,484 cpgIslandExtUnmasked,487 cpgIslandSuper,484 k2 cpgIslandExt,486 cpgIslandExtUnmasked,489 cpgIslandSuper,486 karlin genscan,148 genscan,209 kasif genscan,193 kd refSeqComposite,1756 refSeqComposite,1798 xenoRefGene,324 xenoRefGene,366 kd-tree chainHg38,649 chainNetHg38,652 chainNetTarSyr2,652 chainTarSyr2,649 netHg38,649 netTarSyr2,649 kd-trees chainHg38,667 chainNetHg38,670 chainNetTarSyr2,670 chainTarSyr2,667 netHg38,667 netTarSyr2,667 keep cpgIslandExt,125 cpgIslandExtUnmasked,128 cpgIslandSuper,125 uniprot,1486 kent chainHg38,976 chainHg38,1003 chainHg38,1021 chainHg38,1056 chainHg38,1098 chainNetHg38,979 chainNetHg38,1006 chainNetHg38,1024 chainNetHg38,1059 chainNetHg38,1101 chainNetTarSyr2,979 chainNetTarSyr2,1006 chainNetTarSyr2,1024 chainNetTarSyr2,1059 chainNetTarSyr2,1101 chainTarSyr2,976 chainTarSyr2,1003 chainTarSyr2,1021 chainTarSyr2,1056 chainTarSyr2,1098 netHg38,976 netHg38,1003 netHg38,1021 netHg38,1056 netHg38,1098 netTarSyr2,976 netTarSyr2,1003 netTarSyr2,1021 netTarSyr2,1056 netTarSyr2,1098 refSeqComposite,1737 xenoRefGene,306 kept refSeqComposite,1294 xenoRefGene,282 km refSeqComposite,1774 xenoRefGene,342 known chainHg38,926 chainNetHg38,929 chainNetTarSyr2,929 chainTarSyr2,926 gold,123 netHg38,926 netTarSyr2,926 refSeqComposite,509 xenoRefGene,16 l cpgIslandExt,600 cpgIslandExtUnmasked,603 cpgIslandSuper,600 ensGene,179 transMapEnsemblV5,725 transMapEstV5,694 transMapRefSeqV5,694 transMapRnaV5,694 transMapV5,800 lab augustusGene,252 label genscan,98 refSeqComposite,768 refSeqComposite,780 refSeqComposite,816 xenoRefGene,103 xenoRefGene,115 xenoRefGene,138 labeled nestedRepeats,132 refSeqComposite,773 uniprot,457 xenoRefGene,108 labels nestedRepeats,161 refSeqComposite,722 refSeqComposite,802 xenoRefGene,80 landrum refSeqComposite,1771 xenoRefGene,339 langton transMapEnsemblV5,724 transMapEstV5,693 transMapRefSeqV5,693 transMapRnaV5,693 transMapV5,799 largely chainHg38,145 chainNetHg38,148 chainNetTarSyr2,148 chainTarSyr2,145 netHg38,145 netTarSyr2,145 largest chainHg38,401 chainNetHg38,404 chainNetTarSyr2,404 chainTarSyr2,401 netHg38,401 netTarSyr2,401 lastz chainHg38,600 chainHg38,775 chainHg38,924 chainNetHg38,603 chainNetHg38,778 chainNetHg38,927 chainNetTarSyr2,603 chainNetTarSyr2,778 chainNetTarSyr2,927 chainTarSyr2,600 chainTarSyr2,775 chainTarSyr2,924 netHg38,600 netHg38,775 netHg38,924 netTarSyr2,600 netTarSyr2,775 netTarSyr2,924 transMapV5,46 lau transMapEnsemblV5,736 transMapEstV5,705 transMapRefSeqV5,705 transMapRnaV5,705 transMapV5,811 lavtoaxt chainHg38,618 chainNetHg38,621 chainNetTarSyr2,621 chainTarSyr2,618 netHg38,618 netTarSyr2,618 least microsat,29 microsat,78 refSeqComposite,1285 xenoRefGene,273 lee uniprot,1955 left refSeqComposite,976 length augustusGene,82 cpgIslandExt,268 cpgIslandExt,360 cpgIslandExt,395 cpgIslandExtUnmasked,271 cpgIslandExtUnmasked,363 cpgIslandExtUnmasked,398 cpgIslandSuper,268 cpgIslandSuper,360 cpgIslandSuper,395 genscan,39 less refSeqComposite,1249 transMapEnsemblV5,378 transMapEstV5,347 transMapRefSeqV5,347 transMapRnaV5,347 transMapV5,453 uniprot,680 xenoRefGene,237 level chainHg38,396 chainHg38,430 chainHg38,435 chainHg38,442 chainHg38,500 chainHg38,527 chainHg38,540 chainHg38,572 chainNetHg38,399 chainNetHg38,433 chainNetHg38,438 chainNetHg38,445 chainNetHg38,503 chainNetHg38,530 chainNetHg38,543 chainNetHg38,575 chainNetTarSyr2,399 chainNetTarSyr2,433 chainNetTarSyr2,438 chainNetTarSyr2,445 chainNetTarSyr2,503 chainNetTarSyr2,530 chainNetTarSyr2,543 chainNetTarSyr2,575 chainTarSyr2,396 chainTarSyr2,430 chainTarSyr2,435 chainTarSyr2,442 chainTarSyr2,500 chainTarSyr2,527 chainTarSyr2,540 chainTarSyr2,572 netHg38,396 netHg38,430 netHg38,435 netHg38,442 netHg38,500 netHg38,527 netHg38,540 netHg38,572 netTarSyr2,396 netTarSyr2,430 netTarSyr2,435 netTarSyr2,442 netTarSyr2,500 netTarSyr2,527 netTarSyr2,540 netTarSyr2,572 refSeqComposite,615 refSeqComposite,635 refSeqComposite,1277 rmsk,205 xenoRefGene,64 xenoRefGene,265 levels cpgIslandExt,158 cpgIslandExtUnmasked,161 cpgIslandSuper,158 libraries nestedRepeats,258 nestedRepeats,317 rmsk,340 library nestedRepeats,47 rmsk,83 lifted uniprot,1492 lifting uniprot,1843 liftover uniprot,887 uniprot,1878 uniprot,1897 uniprot,1920 uniprot,1924 uniprot,1932 light cpgIslandExt,9 cpgIslandExtUnmasked,12 cpgIslandSuper,9 refSeqComposite,624 unipAliSwissprot,14 uniprot,506 uniprot,592 xenoRefGene,73 light-blue uniprot,178 lighter rmsk,237 like chainHg38,47 chainHg38,55 chainNetHg38,50 chainNetHg38,58 chainNetTarSyr2,50 chainNetTarSyr2,58 chainTarSyr2,47 chainTarSyr2,55 ensGene,148 netHg38,47 netHg38,55 netTarSyr2,47 netTarSyr2,55 refSeqComposite,84 refSeqComposite,1620 uniprot,1541 likely augustusGene,111 microsat,17 refSeqComposite,952 transMapV5,95 line chainHg38,478 chainNetHg38,481 chainNetTarSyr2,481 chainTarSyr2,478 gap,107 gold,126 nestedRepeats,151 netHg38,478 netTarSyr2,478 refSeqComposite,1007 refSeqComposite,1018 refSeqComposite,1619 rmsk,165 uniprot,1872 uniprot,1876 line-up chainHg38,545 chainNetHg38,548 chainNetTarSyr2,548 chainTarSyr2,545 netHg38,545 netTarSyr2,545 line-ups chainHg38,530 chainNetHg38,533 chainNetTarSyr2,533 chainTarSyr2,530 netHg38,530 netTarSyr2,530 lineage transMapEnsemblV5,813 transMapEstV5,782 transMapRefSeqV5,782 transMapRnaV5,782 transMapV5,888 lineage-specific chainHg38,950 chainNetHg38,953 chainNetTarSyr2,953 chainTarSyr2,950 netHg38,950 netTarSyr2,950 linear chainHg38,709 chainNetHg38,712 chainNetTarSyr2,712 chainTarSyr2,709 netHg38,709 netTarSyr2,709 lineargap chainHg38,715 chainNetHg38,718 chainNetTarSyr2,718 chainTarSyr2,715 netHg38,715 netTarSyr2,715 lines chainHg38,133 chainHg38,140 chainHg38,164 chainHg38,458 chainNetHg38,136 chainNetHg38,143 chainNetHg38,167 chainNetHg38,461 chainNetTarSyr2,136 chainNetTarSyr2,143 chainNetTarSyr2,167 chainNetTarSyr2,461 chainTarSyr2,133 chainTarSyr2,140 chainTarSyr2,164 chainTarSyr2,458 nestedRepeats,131 netHg38,133 netHg38,140 netHg38,164 netHg38,458 netTarSyr2,133 netTarSyr2,140 netTarSyr2,164 netTarSyr2,458 refSeqComposite,1002 link gc5BaseBw,63 uniprot,491 uniprot,1675 linked refSeqComposite,1537 refSeqComposite,1652 linux.x86_64 cpgIslandExt,579 cpgIslandExtUnmasked,582 cpgIslandSuper,579 uniprot,1919 lipid uniprot,346 lipoification uniprot,577 list refSeqComposite,767 refSeqComposite,1696 uniprot,979 uniprot,1165 uniprot,1831 listed ensGene,49 literature refSeqComposite,284 refSeqComposite,663 uniprot,434 lm uniprot,2019 loaded windowmaskerSdust,79 local chainHg38,113 chainHg38,186 chainNetHg38,116 chainNetHg38,189 chainNetTarSyr2,116 chainNetTarSyr2,189 chainTarSyr2,113 chainTarSyr2,186 ensGene,73 nestedRepeats,98 netHg38,113 netHg38,186 netTarSyr2,113 netTarSyr2,186 refSeqComposite,1342 located simpleRepeat,21 location chainHg38,256 chainNetHg38,259 chainNetTarSyr2,259 chainTarSyr2,256 netHg38,256 netTarSyr2,256 transMapEnsemblV5,407 transMapEnsemblV5,417 transMapEnsemblV5,484 transMapEstV5,376 transMapEstV5,386 transMapEstV5,453 transMapRefSeqV5,376 transMapRefSeqV5,386 transMapRefSeqV5,453 transMapRnaV5,376 transMapRnaV5,386 transMapRnaV5,453 transMapV5,482 transMapV5,492 transMapV5,559 uniprot,554 uniprot,767 uniprot,1417 locations gap,3 transMapEnsemblV5,496 transMapEstV5,465 transMapRefSeqV5,465 transMapRnaV5,465 transMapV5,571 uniprot,451 long refSeqComposite,1031 rmsk,161 rmsk,166 long-established transMapEnsemblV5,808 transMapEstV5,777 transMapRefSeqV5,777 transMapRnaV5,777 transMapV5,883 longer chainHg38,83 chainNetHg38,86 chainNetTarSyr2,86 chainTarSyr2,83 netHg38,83 netTarSyr2,83 longest chainHg38,523 chainNetHg38,526 chainNetTarSyr2,526 chainTarSyr2,523 netHg38,523 netTarSyr2,523 look chainHg38,46 chainNetHg38,49 chainNetTarSyr2,49 chainTarSyr2,46 netHg38,46 netTarSyr2,46 losses transMapEnsemblV5,806 transMapEstV5,775 transMapRefSeqV5,775 transMapRnaV5,775 transMapV5,881 lot uniprot,1950 low nestedRepeats,39 rmsk,29 rmsk,181 lowe transMapEnsemblV5,796 transMapEstV5,765 transMapRefSeqV5,765 transMapRnaV5,765 transMapV5,871 lower chainHg38,499 chainNetHg38,502 chainNetTarSyr2,502 chainTarSyr2,499 netHg38,499 netTarSyr2,499 lower-level chainHg38,866 chainHg38,872 chainNetHg38,869 chainNetHg38,875 chainNetTarSyr2,869 chainNetTarSyr2,875 chainTarSyr2,866 chainTarSyr2,872 netHg38,866 netHg38,872 netTarSyr2,866 netTarSyr2,872 ls-snp uniprot,1536 lt refSeqComposite,948 ltr rmsk,170 m augustusGene,287 augustusGene,289 augustusGene,317 cpgIslandExt,605 cpgIslandExt,607 cpgIslandExtUnmasked,608 cpgIslandExtUnmasked,610 cpgIslandSuper,605 cpgIslandSuper,607 transMapEnsemblV5,720 transMapEnsemblV5,727 transMapEnsemblV5,761 transMapEnsemblV5,763 transMapEnsemblV5,795 transMapEstV5,689 transMapEstV5,696 transMapEstV5,730 transMapEstV5,732 transMapEstV5,764 transMapRefSeqV5,689 transMapRefSeqV5,696 transMapRefSeqV5,730 transMapRefSeqV5,732 transMapRefSeqV5,764 transMapRnaV5,689 transMapRnaV5,696 transMapRnaV5,730 transMapRnaV5,732 transMapRnaV5,764 transMapV5,795 transMapV5,802 transMapV5,836 transMapV5,838 transMapV5,870 made rmsk,110 transMapEnsemblV5,399 transMapEstV5,368 transMapRefSeqV5,368 transMapRnaV5,368 transMapV5,474 uniprot,931 uniprot,938 maglott refSeqComposite,1801 xenoRefGene,369 mailing refSeqComposite,1695 uniprot,1830 main unipAliSwissprot,12 uniprot,156 uniprot,1548 maintained uniprot,719 make gold,77 refSeqComposite,117 refSeqComposite,1103 rmsk,123 transMapEnsemblV5,433 transMapEstV5,402 transMapRefSeqV5,402 transMapRnaV5,402 transMapV5,508 uniprot,1406 makedb rmsk,131 making uniprot,1978 mammalian nestedRepeats,368 nestedRepeats,382 refSeqComposite,1781 rmsk,391 rmsk,405 xenoRefGene,349 manner refSeqComposite,1632 uniprot,1469 manual refSeqComposite,259 uniprot,1652 manually refSeqComposite,251 refSeqComposite,422 many chainHg38,409 chainNetHg38,412 chainNetTarSyr2,412 chainTarSyr2,409 netHg38,409 netTarSyr2,409 uniprot,932 uniprot,1124 map chainHg38,337 chainNetHg38,340 chainNetTarSyr2,340 chainTarSyr2,337 netHg38,337 netTarSyr2,337 transMapEnsemblV5,296 transMapEstV5,265 transMapRefSeqV5,265 transMapRnaV5,265 transMapV5,371 uniprot,758 uniprot,1885 mapped augustusGene,298 nestedRepeats,233 refSeqComposite,1112 transMapEnsemblV5,384 transMapEnsemblV5,416 transMapEnsemblV5,474 transMapEnsemblV5,772 transMapEstV5,353 transMapEstV5,385 transMapEstV5,443 transMapEstV5,741 transMapRefSeqV5,353 transMapRefSeqV5,385 transMapRefSeqV5,443 transMapRefSeqV5,741 transMapRnaV5,353 transMapRnaV5,385 transMapRnaV5,443 transMapRnaV5,741 transMapV5,132 transMapV5,459 transMapV5,491 transMapV5,549 transMapV5,847 uniprot,26 uniprot,97 uniprot,117 uniprot,132 uniprot,200 uniprot,213 uniprot,632 uniprot,1517 mapping cytoBandIdeo,7 gap,4 gc5BaseBw,8 gold,5 refSeqComposite,321 transMapEnsemblV5,269 transMapEnsemblV5,289 transMapEnsemblV5,302 transMapEstV5,238 transMapEstV5,258 transMapEstV5,271 transMapRefSeqV5,238 transMapRefSeqV5,258 transMapRefSeqV5,271 transMapRnaV5,238 transMapRnaV5,258 transMapRnaV5,271 transMapV5,344 transMapV5,364 transMapV5,377 ucscToINSDC,10 ucscToRefSeq,5 uniprot,725 uniprot,752 uniprot,775 uniprot,904 uniprot,1213 uniprot,1322 uniprot,1613 uniprot,1853 mappings transMapEnsemblV5,7 transMapEnsemblV5,506 transMapEstV5,5 transMapEstV5,475 transMapRefSeqV5,6 transMapRefSeqV5,475 transMapRnaV5,6 transMapRnaV5,475 transMapV5,581 uniprot,1362 maps transMapEnsemblV5,480 transMapEnsemblV5,493 transMapEstV5,449 transMapEstV5,462 transMapRefSeqV5,449 transMapRefSeqV5,462 transMapRnaV5,449 transMapRnaV5,462 transMapV5,73 transMapV5,555 transMapV5,568 mar augustusGene,309 transMapEnsemblV5,783 transMapEstV5,752 transMapRefSeqV5,752 transMapRnaV5,752 transMapV5,858 mario augustusGene,102 augustusGene,283 mark transMapEnsemblV5,685 transMapEstV5,654 transMapRefSeqV5,654 transMapRnaV5,654 transMapV5,760 uniprot,1539 uniprot,1956 marked refSeqComposite,529 markers microsat,23 markov augustusGene,325 masked cpgIslandExt,192 cpgIslandExt,198 cpgIslandExt,328 cpgIslandExtUnmasked,195 cpgIslandExtUnmasked,201 cpgIslandExtUnmasked,331 cpgIslandSuper,192 cpgIslandSuper,198 cpgIslandSuper,328 rmsk,71 windowmaskerSdust,5 windowmaskerSdust,16 masker windowmaskerSdust,102 masking cpgIslandExt,304 cpgIslandExtUnmasked,307 cpgIslandSuper,304 maskoutfa cpgIslandExt,414 cpgIslandExtUnmasked,417 cpgIslandSuper,414 match chainHg38,261 chainHg38,524 chainHg38,562 chainNetHg38,264 chainNetHg38,527 chainNetHg38,565 chainNetTarSyr2,264 chainNetTarSyr2,527 chainNetTarSyr2,565 chainTarSyr2,261 chainTarSyr2,524 chainTarSyr2,562 netHg38,261 netHg38,524 netHg38,562 netTarSyr2,261 netTarSyr2,524 netTarSyr2,562 refSeqComposite,916 refSeqComposite,930 uniprot,1305 uniprot,1341 matching chainHg38,264 chainNetHg38,267 chainNetTarSyr2,267 chainTarSyr2,264 netHg38,264 netTarSyr2,264 uniprot,1068 uniprot,1075 matrix chainHg38,679 chainHg38,711 chainNetHg38,682 chainNetHg38,714 chainNetTarSyr2,682 chainNetTarSyr2,714 chainTarSyr2,679 chainTarSyr2,711 netHg38,679 netHg38,711 netTarSyr2,679 netTarSyr2,711 mature unipChain,3 uniprot,251 uniprot,292 maximally chainHg38,671 chainNetHg38,674 chainNetTarSyr2,674 chainTarSyr2,671 cpgIslandExt,250 cpgIslandExtUnmasked,253 cpgIslandSuper,250 netHg38,671 netTarSyr2,671 maximilian uniprot,1944 maxtracks augustusGene,139 may chainHg38,177 chainHg38,438 chainNetHg38,180 chainNetHg38,441 chainNetTarSyr2,180 chainNetTarSyr2,441 chainTarSyr2,177 chainTarSyr2,438 cpgIslandExt,36 cpgIslandExtUnmasked,39 cpgIslandSuper,36 gc5BaseBw,40 nestedRepeats,268 nestedRepeats,290 netHg38,177 netHg38,438 netTarSyr2,177 netTarSyr2,438 refSeqComposite,61 refSeqComposite,667 rmsk,297 rmsk,307 simpleRepeat,43 transMapEnsemblV5,109 transMapEnsemblV5,144 transMapEstV5,78 transMapEstV5,113 transMapRefSeqV5,78 transMapRefSeqV5,113 transMapRnaV5,78 transMapRnaV5,113 transMapV5,184 transMapV5,219 uniprot,2046 mcgarvey refSeqComposite,1773 xenoRefGene,341 md5 uniprot,1601 mediating uniprot,314 medium chainHg38,716 chainNetHg38,719 chainNetTarSyr2,719 chainTarSyr2,716 netHg38,716 netTarSyr2,716 refSeqComposite,626 xenoRefGene,75 mellifera augustusGene,216 mementos nestedRepeats,377 rmsk,400 menu refSeqComposite,854 xenoRefGene,176 method ensGene,120 uniprot,726 uniprot,753 uniprot,776 methods augustusGene,46 chainHg38,574 chainHg38,779 chainNetHg38,577 chainNetHg38,782 chainNetTarSyr2,577 chainNetTarSyr2,782 chainTarSyr2,574 chainTarSyr2,779 cpgIslandExt,224 cpgIslandExtUnmasked,227 cpgIslandSuper,224 ensGene,29 ensGene,35 genscan,130 genscan,197 microsat,45 nestedRepeats,244 netHg38,574 netHg38,779 netTarSyr2,574 netTarSyr2,779 refSeqComposite,92 refSeqComposite,1144 refSeqComposite,1226 rmsk,286 simpleRepeat,55 transMapEnsemblV5,153 transMapEstV5,122 transMapRefSeqV5,122 transMapRnaV5,122 transMapV5,228 uniprot,777 windowmaskerSdust,46 xenoRefGene,219 methylated cpgIslandExt,71 cpgIslandExt,100 cpgIslandExt,132 cpgIslandExtUnmasked,74 cpgIslandExtUnmasked,103 cpgIslandExtUnmasked,135 cpgIslandSuper,71 cpgIslandSuper,100 cpgIslandSuper,132 methylation cpgIslandExt,73 cpgIslandExtUnmasked,76 cpgIslandSuper,73 micro-satellites rmsk,180 microsatellite microsat,1 microsat,22 microsatellites microsat,2 miklem cpgIslandExt,598 cpgIslandExtUnmasked,601 cpgIslandSuper,598 miller chainHg38,944 chainHg38,981 chainHg38,1042 chainHg38,1062 chainHg38,1110 chainNetHg38,947 chainNetHg38,984 chainNetHg38,1045 chainNetHg38,1065 chainNetHg38,1113 chainNetTarSyr2,947 chainNetTarSyr2,984 chainNetTarSyr2,1045 chainNetTarSyr2,1065 chainNetTarSyr2,1113 chainTarSyr2,944 chainTarSyr2,981 chainTarSyr2,1042 chainTarSyr2,1062 chainTarSyr2,1110 netHg38,944 netHg38,981 netHg38,1042 netHg38,1062 netHg38,1110 netTarSyr2,944 netTarSyr2,981 netTarSyr2,1042 netTarSyr2,1062 netTarSyr2,1110 minexonintronprob augustusGene,135 minimum chainHg38,692 chainNetHg38,695 chainNetTarSyr2,695 chainTarSyr2,692 netHg38,692 netTarSyr2,692 minmeanexonintronprob augustusGene,137 minmei chainHg38,936 chainNetHg38,939 chainNetTarSyr2,939 chainTarSyr2,936 netHg38,936 netTarSyr2,936 mismatch refSeqComposite,900 rmsk,218 mismatching refSeqComposite,904 misplacements uniprot,853 mitochondrion refSeqComposite,242 mj refSeqComposite,1772 xenoRefGene,340 mk_counts windowmaskerSdust,59 mode chainHg38,393 chainNetHg38,396 chainNetTarSyr2,396 chainTarSyr2,393 gold,70 nestedRepeats,119 nestedRepeats,160 nestedRepeats,169 netHg38,393 netTarSyr2,393 rmsk,142 model augustusGene,121 augustusGene,326 genscan,140 modeling genscan,182 models augustusGene,49 augustusGene,65 augustusGene,97 augustusGene,145 augustusGene,178 genscan,158 uniprot,733 modes chainHg38,246 chainNetHg38,249 chainNetTarSyr2,249 chainTarSyr2,246 netHg38,246 netTarSyr2,246 modification cpgIslandExt,591 cpgIslandExtUnmasked,594 cpgIslandSuper,591 modifications unipModif,2 unipModif,6 uniprot,340 uniprot,574 modified rmsk,57 uniprot,343 modsnp uniprot,2030 moiety-binding uniprot,347 mol cpgIslandExt,614 cpgIslandExtUnmasked,617 cpgIslandSuper,614 genscan,221 molecular genscan,199 monkey chainHg38,74 chainHg38,102 chainHg38,161 chainHg38,209 chainHg38,277 chainHg38,286 chainHg38,587 chainHg38,641 chainNetHg38,77 chainNetHg38,105 chainNetHg38,164 chainNetHg38,212 chainNetHg38,280 chainNetHg38,289 chainNetHg38,590 chainNetHg38,644 chainNetTarSyr2,77 chainNetTarSyr2,105 chainNetTarSyr2,164 chainNetTarSyr2,212 chainNetTarSyr2,280 chainNetTarSyr2,289 chainNetTarSyr2,590 chainNetTarSyr2,644 chainTarSyr2,74 chainTarSyr2,102 chainTarSyr2,161 chainTarSyr2,209 chainTarSyr2,277 chainTarSyr2,286 chainTarSyr2,587 chainTarSyr2,641 gap,19 gold,21 netHg38,74 netHg38,102 netHg38,161 netHg38,209 netHg38,277 netHg38,286 netHg38,587 netHg38,641 netTarSyr2,74 netTarSyr2,102 netTarSyr2,161 netTarSyr2,209 netTarSyr2,277 netTarSyr2,286 netTarSyr2,587 netTarSyr2,641 refSeqComposite,21 refSeqComposite,445 refSeqComposite,468 refSeqComposite,503 refSeqComposite,1240 transMapEnsemblV5,92 transMapEnsemblV5,206 transMapEnsemblV5,338 transMapEstV5,61 transMapEstV5,175 transMapEstV5,307 transMapRefSeqV5,61 transMapRefSeqV5,175 transMapRefSeqV5,307 transMapRnaV5,61 transMapRnaV5,175 transMapRnaV5,307 transMapV5,62 transMapV5,281 transMapV5,413 xenoRefGene,5 xenoRefGene,27 xenoRefGene,228 months uniprot,1573 more augustusGene,35 chainHg38,166 chainHg38,228 chainNetHg38,169 chainNetHg38,231 chainNetTarSyr2,169 chainNetTarSyr2,231 chainTarSyr2,166 chainTarSyr2,228 cpgIslandExt,541 cpgIslandExtUnmasked,544 cpgIslandSuper,541 ensGene,18 ensGene,158 genscan,50 genscan,125 genscan,163 microsat,96 nestedRepeats,211 nestedRepeats,300 netHg38,166 netHg38,228 netTarSyr2,166 netTarSyr2,228 refSeqComposite,95 refSeqComposite,131 refSeqComposite,856 refSeqComposite,1388 refSeqComposite,1468 rmsk,323 simpleRepeat,57 transMapEnsemblV5,132 transMapEnsemblV5,149 transMapEnsemblV5,226 transMapEnsemblV5,271 transMapEnsemblV5,293 transMapEnsemblV5,571 transMapEstV5,101 transMapEstV5,118 transMapEstV5,195 transMapEstV5,240 transMapEstV5,262 transMapEstV5,540 transMapRefSeqV5,101 transMapRefSeqV5,118 transMapRefSeqV5,195 transMapRefSeqV5,240 transMapRefSeqV5,262 transMapRefSeqV5,540 transMapRnaV5,101 transMapRnaV5,118 transMapRnaV5,195 transMapRnaV5,240 transMapRnaV5,262 transMapRnaV5,540 transMapV5,64 transMapV5,108 transMapV5,165 transMapV5,207 transMapV5,224 transMapV5,301 transMapV5,346 transMapV5,368 transMapV5,646 uniprot,498 uniprot,691 uniprot,984 uniprot,1841 xenoRefGene,178 morgulis windowmaskerSdust,90 most augustusGene,93 augustusGene,110 nestedRepeats,249 refSeqComposite,584 refSeqComposite,951 transMapV5,94 uniprot,683 uniprot,756 uniprot,1295 uniprot,1391 mostly uniprot,1365 motifs uniprot,388 mouse chainHg38,1075 chainNetHg38,1078 chainNetTarSyr2,1078 chainTarSyr2,1075 netHg38,1075 netTarSyr2,1075 transMapEnsemblV5,44 transMapEnsemblV5,370 transMapEstV5,339 transMapRefSeqV5,339 transMapRnaV5,339 transMapV5,445 uniprot,521 uniprot,535 mrna transMapEnsemblV5,461 transMapEstV5,430 transMapRefSeqV5,430 transMapRnaV5,18 transMapRnaV5,430 transMapV5,101 transMapV5,536 mrnas transMapEnsemblV5,174 transMapEstV5,143 transMapRefSeqV5,143 transMapRnaV5,143 transMapV5,112 transMapV5,249 much chainHg38,893 chainHg38,910 chainNetHg38,896 chainNetHg38,913 chainNetTarSyr2,896 chainNetTarSyr2,913 chainTarSyr2,893 chainTarSyr2,910 nestedRepeats,210 netHg38,893 netHg38,910 netTarSyr2,893 netTarSyr2,910 mujica uniprot,1967 multiple chainHg38,198 chainNetHg38,201 chainNetTarSyr2,201 chainTarSyr2,198 netHg38,198 netTarSyr2,198 refSeqComposite,1260 refSeqComposite,1307 transMapEnsemblV5,504 transMapEstV5,473 transMapRefSeqV5,473 transMapRnaV5,473 transMapV5,579 uniprot,58 uniprot,1067 uniprot,1095 xenoRefGene,248 must refSeqComposite,304 refSeqComposite,1641 mutagenesis uniprot,353 mutat uniprot,2044 mutated uniprot,618 mutation chainHg38,187 chainNetHg38,190 chainNetTarSyr2,190 chainTarSyr2,187 netHg38,187 netTarSyr2,187 refSeqComposite,567 mutation-related uniprot,408 mutations unipMut,1 unipMut,5 uniprot,352 mysql cpgIslandExt,538 cpgIslandExtUnmasked,541 cpgIslandSuper,538 ensGene,115 ensGene,125 refSeqComposite,1333 refSeqComposite,1636 refSeqComposite,1650 n cpgIslandExt,386 cpgIslandExt,394 cpgIslandExt,456 cpgIslandExtUnmasked,389 cpgIslandExtUnmasked,397 cpgIslandExtUnmasked,459 cpgIslandSuper,386 cpgIslandSuper,394 cpgIslandSuper,456 refSeqComposite,922 refSeqComposite,963 refSeqComposite,990 refSeqComposite,1049 refSeqComposite,1076 refSeqComposite,1091 name chainHg38,375 chainNetHg38,378 chainNetTarSyr2,378 chainTarSyr2,375 nestedRepeats,136 netHg38,375 netTarSyr2,375 refSeqComposite,763 refSeqComposite,776 refSeqComposite,786 refSeqComposite,794 refSeqComposite,806 uniprot,105 uniprot,461 uniprot,541 uniprot,1577 xenoRefGene,111 xenoRefGene,121 xenoRefGene,126 names chainHg38,250 chainNetHg38,253 chainNetTarSyr2,253 chainTarSyr2,250 netHg38,250 netTarSyr2,250 refSeqComposite,811 ucscToINSDC,21 ucscToINSDC,24 ucscToRefSeq,16 xenoRefGene,133 native augustusGene,295 transMapEnsemblV5,769 transMapEstV5,738 transMapRefSeqV5,738 transMapRnaV5,738 transMapV5,124 transMapV5,844 natl chainHg38,1080 chainNetHg38,1083 chainNetTarSyr2,1083 chainTarSyr2,1080 netHg38,1080 netTarSyr2,1080 natural chainHg38,831 chainNetHg38,834 chainNetTarSyr2,834 chainTarSyr2,831 netHg38,831 netTarSyr2,831 nbci uniprot,822 nbsp chainHg38,682 chainNetHg38,685 chainNetTarSyr2,685 chainTarSyr2,682 netHg38,682 netTarSyr2,682 nc_008218.1 gold,161 ncbi gap,29 gap,32 gap,58 gold,31 gold,34 gold,57 ncbiRefSeq,3 ncbiRefSeqGenomicDiff,5 ncbiRefSeqOther,3 ncbiRefSeqPredicted,3 refSeqComposite,1 refSeqComposite,6 refSeqComposite,13 refSeqComposite,29 refSeqComposite,74 refSeqComposite,81 refSeqComposite,106 refSeqComposite,319 refSeqComposite,375 refSeqComposite,550 refSeqComposite,646 refSeqComposite,653 refSeqComposite,697 refSeqComposite,1164 refSeqComposite,1195 refSeqComposite,1211 refSeqComposite,1733 refSeqComposite,1803 ucscToINSDC,39 ucscToRefSeq,22 ucscToRefSeq,33 uniprot,840 uniprot,856 uniprot,1024 uniprot,1046 uniprot,1049 uniprot,1079 uniprot,1204 uniprot,1274 uniprot,1280 uniprot,1289 uniprot,1299 windowmaskerSdust,29 windowmaskerSdust,43 xenoRefGene,31 xenoRefGene,302 xenoRefGene,371 ncbirefseq refSeqComposite,1416 refSeqComposite,1560 refSeqComposite,1704 ncbirefseqcurated refSeqComposite,1419 ncbirefseqdiffs.bb refSeqComposite,1499 ncbirefseqother.bb refSeqComposite,1497 refSeqComposite,1561 ncbirefseqpredicted refSeqComposite,1422 refSeqComposite,1624 ncbirefseqpredicted.gtf refSeqComposite,1625 ncbirefseqpsl refSeqComposite,1430 ndash refSeqComposite,201 refSeqComposite,212 refSeqComposite,342 refSeqComposite,381 refSeqComposite,436 refSeqComposite,461 refSeqComposite,485 refSeqComposite,523 refSeqComposite,556 refSeqComposite,901 refSeqComposite,935 refSeqComposite,968 refSeqComposite,1026 refSeqComposite,1052 near cpgIslandExt,31 cpgIslandExtUnmasked,34 cpgIslandSuper,31 refSeqComposite,1653 near-best transMapEnsemblV5,361 transMapEstV5,330 transMapRefSeqV5,330 transMapRnaV5,330 transMapV5,436 necessary chainHg38,815 chainNetHg38,818 chainNetTarSyr2,818 chainTarSyr2,815 netHg38,815 netTarSyr2,815 nematodes augustusGene,211 net chainHg38,34 chainHg38,266 chainHg38,269 chainHg38,388 chainHg38,769 chainNetHg38,3 chainNetHg38,11 chainNetHg38,37 chainNetHg38,269 chainNetHg38,272 chainNetHg38,391 chainNetHg38,772 chainNetHg38Viewchain,9 chainNetHg38Viewnet,1 chainNetHg38Viewnet,9 chainNetTarSyr2,3 chainNetTarSyr2,11 chainNetTarSyr2,37 chainNetTarSyr2,269 chainNetTarSyr2,272 chainNetTarSyr2,391 chainNetTarSyr2,772 chainNetTarSyr2Viewchain,9 chainNetTarSyr2Viewnet,1 chainNetTarSyr2Viewnet,9 chainTarSyr2,34 chainTarSyr2,266 chainTarSyr2,269 chainTarSyr2,388 chainTarSyr2,769 netHg38,2 netHg38,9 netHg38,34 netHg38,266 netHg38,269 netHg38,388 netHg38,769 netTarSyr2,2 netTarSyr2,9 netTarSyr2,34 netTarSyr2,266 netTarSyr2,269 netTarSyr2,388 netTarSyr2,769 transMapV5,141 netclass chainHg38,885 chainHg38,1008 chainNetHg38,888 chainNetHg38,1011 chainNetTarSyr2,888 chainNetTarSyr2,1011 chainTarSyr2,885 chainTarSyr2,1008 netHg38,885 netHg38,1008 netTarSyr2,885 netTarSyr2,1008 netfilter transMapEnsemblV5,256 transMapEstV5,225 transMapRefSeqV5,225 transMapRnaV5,225 transMapV5,331 nets chainHg38,995 chainNetHg38,998 chainNetTarSyr2,998 chainTarSyr2,995 netHg38,995 netTarSyr2,995 transMapEnsemblV5,201 transMapEnsemblV5,245 transMapEnsemblV5,251 transMapEnsemblV5,265 transMapEstV5,170 transMapEstV5,214 transMapEstV5,220 transMapEstV5,234 transMapRefSeqV5,170 transMapRefSeqV5,214 transMapRefSeqV5,220 transMapRefSeqV5,234 transMapRnaV5,170 transMapRnaV5,214 transMapRnaV5,220 transMapRnaV5,234 transMapV5,90 transMapV5,276 transMapV5,320 transMapV5,326 transMapV5,340 netsyntenic chainHg38,853 chainHg38,1006 chainNetHg38,856 chainNetHg38,1009 chainNetTarSyr2,856 chainNetTarSyr2,1009 chainTarSyr2,853 chainTarSyr2,1006 netHg38,853 netHg38,1006 netTarSyr2,853 netTarSyr2,1006 new augustusGene,329 newer nestedRepeats,270 rmsk,106 newly cpgIslandExt,77 cpgIslandExtUnmasked,80 cpgIslandSuper,77 next chainHg38,354 chainHg38,383 chainNetHg38,357 chainNetHg38,386 chainNetTarSyr2,357 chainNetTarSyr2,386 chainTarSyr2,354 chainTarSyr2,383 netHg38,354 netHg38,383 netTarSyr2,354 netTarSyr2,383 refSeqComposite,168 refSeqComposite,759 nig augustusGene,270 nm refSeqComposite,226 refSeqComposite,495 nm_ ncbiRefSeq,9 ncbiRefSeqOther,8 nm_012309 refSeqComposite,1143 nm_012309.4 refSeqComposite,1141 no microsat,73 transMapEnsemblV5,225 transMapEstV5,194 transMapRefSeqV5,194 transMapRnaV5,194 transMapV5,300 uniprot,1031 uniprot,1078 uniprot,1262 uniprot,1324 nomask cpgIslandExt,498 cpgIslandExtUnmasked,501 cpgIslandSuper,498 non-alignable chainHg38,49 chainNetHg38,52 chainNetTarSyr2,52 chainTarSyr2,49 netHg38,49 netTarSyr2,49 non-coding augustusGene,75 refSeqComposite,1092 xenoRefGene,195 non-golden xenoRefGene,3 non-protein-coding refSeqComposite,24 xenoRefGene,19 xenoRefGene,203 non-redundant refSeqComposite,1809 xenoRefGene,377 nonsyn chainHg38,560 chainNetHg38,563 chainNetTarSyr2,563 chainTarSyr2,560 netHg38,560 netTarSyr2,560 normally cpgIslandExt,42 cpgIslandExtUnmasked,45 cpgIslandSuper,42 not chainHg38,820 chainNetHg38,823 chainNetTarSyr2,823 chainTarSyr2,820 cpgIslandExt,131 cpgIslandExt,186 cpgIslandExtUnmasked,134 cpgIslandExtUnmasked,189 cpgIslandSuper,131 cpgIslandSuper,186 ncbiRefSeqOther,7 netHg38,820 netTarSyr2,820 refSeqComposite,178 refSeqComposite,392 refSeqComposite,430 refSeqComposite,477 refSeqComposite,679 refSeqComposite,704 refSeqComposite,1064 refSeqComposite,1142 rmsk,113 rmsk,313 transMapEnsemblV5,62 uniprot,169 uniprot,627 uniprot,959 uniprot,1130 uniprot,1455 note nestedRepeats,264 refSeqComposite,177 refSeqComposite,1626 transMapEnsemblV5,502 transMapEstV5,471 transMapRefSeqV5,471 transMapRnaV5,471 transMapV5,577 uniprot,695 novel transMapEnsemblV5,743 transMapEstV5,712 transMapRefSeqV5,712 transMapRnaV5,712 transMapV5,818 novo augustusGene,304 transMapEnsemblV5,778 transMapEstV5,747 transMapRefSeqV5,747 transMapRnaV5,747 transMapV5,853 now uniprot,1680 np refSeqComposite,228 refSeqComposite,231 np_ ncbiRefSeq,13 ncbiRefSeqOther,12 nr refSeqComposite,227 refSeqComposite,497 nr_ ncbiRefSeq,11 ncbiRefSeqOther,9 ns chainHg38,900 chainNetHg38,903 chainNetTarSyr2,903 chainTarSyr2,900 netHg38,900 netTarSyr2,900 nuclear rmsk,155 rmsk,163 nucleic ensGene,195 microsat,125 refSeqComposite,1784 refSeqComposite,1817 simpleRepeat,85 uniprot,1997 xenoRefGene,352 xenoRefGene,385 nucleotide cpgIslandExt,352 cpgIslandExtUnmasked,355 cpgIslandSuper,352 ucscToINSDC,6 ucscToINSDC,28 number augustusGene,153 cpgIslandExt,279 cpgIslandExt,286 cpgIslandExt,292 cpgIslandExt,337 cpgIslandExt,383 cpgIslandExt,387 cpgIslandExt,390 cpgIslandExtUnmasked,282 cpgIslandExtUnmasked,289 cpgIslandExtUnmasked,295 cpgIslandExtUnmasked,340 cpgIslandExtUnmasked,386 cpgIslandExtUnmasked,390 cpgIslandExtUnmasked,393 cpgIslandSuper,279 cpgIslandSuper,286 cpgIslandSuper,292 cpgIslandSuper,337 cpgIslandSuper,383 cpgIslandSuper,387 cpgIslandSuper,390 rmsk,233 transMapEnsemblV5,430 transMapEnsemblV5,553 transMapEstV5,399 transMapEstV5,522 transMapRefSeqV5,399 transMapRefSeqV5,522 transMapRnaV5,399 transMapRnaV5,522 transMapV5,505 transMapV5,628 o refSeqComposite,1766 xenoRefGene,334 obs cpgIslandExt,380 cpgIslandExtUnmasked,383 cpgIslandSuper,380 observed cpgIslandExt,278 cpgIslandExt,364 cpgIslandExtUnmasked,281 cpgIslandExtUnmasked,367 cpgIslandSuper,278 cpgIslandSuper,364 uniprot,1114 obtain transMapEnsemblV5,655 transMapEstV5,624 transMapRefSeqV5,624 transMapRnaV5,624 transMapV5,730 uniprot,1803 obtained augustusGene,126 cpgIslandExt,562 cpgIslandExt,573 cpgIslandExtUnmasked,565 cpgIslandExtUnmasked,576 cpgIslandSuper,562 cpgIslandSuper,573 refSeqComposite,1491 refSeqComposite,1511 transMapEnsemblV5,158 transMapEnsemblV5,615 transMapEstV5,127 transMapEstV5,584 transMapRefSeqV5,127 transMapRefSeqV5,584 transMapRnaV5,127 transMapRnaV5,584 transMapV5,233 transMapV5,690 uniprot,1506 uniprot,1695 occasional refSeqComposite,64 occur simpleRepeat,36 oct augustusGene,334 gap,15 gold,17 of augustusGene,72 augustusGene,84 augustusGene,92 augustusGene,94 augustusGene,154 augustusGene,195 augustusGene,236 chainHg38,17 chainHg38,64 chainHg38,185 chainHg38,205 chainHg38,259 chainHg38,282 chainHg38,366 chainHg38,376 chainHg38,494 chainHg38,514 chainHg38,651 chainHg38,656 chainHg38,674 chainHg38,694 chainHg38,894 chainHg38,969 chainHg38,991 chainHg38,1015 chainHg38,1029 chainNetHg38,20 chainNetHg38,67 chainNetHg38,188 chainNetHg38,208 chainNetHg38,262 chainNetHg38,285 chainNetHg38,369 chainNetHg38,379 chainNetHg38,497 chainNetHg38,517 chainNetHg38,654 chainNetHg38,659 chainNetHg38,677 chainNetHg38,697 chainNetHg38,897 chainNetHg38,972 chainNetHg38,994 chainNetHg38,1018 chainNetHg38,1032 chainNetTarSyr2,20 chainNetTarSyr2,67 chainNetTarSyr2,188 chainNetTarSyr2,208 chainNetTarSyr2,262 chainNetTarSyr2,285 chainNetTarSyr2,369 chainNetTarSyr2,379 chainNetTarSyr2,497 chainNetTarSyr2,517 chainNetTarSyr2,654 chainNetTarSyr2,659 chainNetTarSyr2,677 chainNetTarSyr2,697 chainNetTarSyr2,897 chainNetTarSyr2,972 chainNetTarSyr2,994 chainNetTarSyr2,1018 chainNetTarSyr2,1032 chainTarSyr2,17 chainTarSyr2,64 chainTarSyr2,185 chainTarSyr2,205 chainTarSyr2,259 chainTarSyr2,282 chainTarSyr2,366 chainTarSyr2,376 chainTarSyr2,494 chainTarSyr2,514 chainTarSyr2,651 chainTarSyr2,656 chainTarSyr2,674 chainTarSyr2,694 chainTarSyr2,894 chainTarSyr2,969 chainTarSyr2,991 chainTarSyr2,1015 chainTarSyr2,1029 cpgIslandExt,91 cpgIslandExt,108 cpgIslandExt,144 cpgIslandExt,171 cpgIslandExt,200 cpgIslandExt,221 cpgIslandExt,264 cpgIslandExt,277 cpgIslandExt,280 cpgIslandExt,290 cpgIslandExt,293 cpgIslandExt,312 cpgIslandExt,338 cpgIslandExt,350 cpgIslandExt,363 cpgIslandExt,384 cpgIslandExt,388 cpgIslandExt,391 cpgIslandExt,396 cpgIslandExt,400 cpgIslandExt,592 cpgIslandExtUnmasked,94 cpgIslandExtUnmasked,111 cpgIslandExtUnmasked,147 cpgIslandExtUnmasked,174 cpgIslandExtUnmasked,203 cpgIslandExtUnmasked,224 cpgIslandExtUnmasked,267 cpgIslandExtUnmasked,280 cpgIslandExtUnmasked,283 cpgIslandExtUnmasked,293 cpgIslandExtUnmasked,296 cpgIslandExtUnmasked,315 cpgIslandExtUnmasked,341 cpgIslandExtUnmasked,353 cpgIslandExtUnmasked,366 cpgIslandExtUnmasked,387 cpgIslandExtUnmasked,391 cpgIslandExtUnmasked,394 cpgIslandExtUnmasked,399 cpgIslandExtUnmasked,403 cpgIslandExtUnmasked,595 cpgIslandSuper,91 cpgIslandSuper,108 cpgIslandSuper,144 cpgIslandSuper,171 cpgIslandSuper,200 cpgIslandSuper,221 cpgIslandSuper,264 cpgIslandSuper,277 cpgIslandSuper,280 cpgIslandSuper,290 cpgIslandSuper,293 cpgIslandSuper,312 cpgIslandSuper,338 cpgIslandSuper,350 cpgIslandSuper,363 cpgIslandSuper,384 cpgIslandSuper,388 cpgIslandSuper,391 cpgIslandSuper,396 cpgIslandSuper,400 cpgIslandSuper,592 ensGene,33 ensGene,134 gap,42 gap,65 gap,84 gap,90 gap,124 gc5BaseBw,19 gc5BaseBw,46 gc5BaseBw,52 gc5BaseBw,67 gc5BaseBw,76 genscan,43 genscan,110 genscan,134 genscan,212 gold,44 gold,64 gold,90 gold,115 gold,145 microsat,27 microsat,55 microsat,64 microsat,81 ncbiRefSeqPsl,5 nestedRepeats,4 nestedRepeats,20 nestedRepeats,27 nestedRepeats,48 nestedRepeats,83 nestedRepeats,93 nestedRepeats,108 nestedRepeats,189 nestedRepeats,195 nestedRepeats,203 nestedRepeats,228 nestedRepeats,252 nestedRepeats,350 nestedRepeats,365 nestedRepeats,378 nestedRepeats,399 netHg38,17 netHg38,64 netHg38,185 netHg38,205 netHg38,259 netHg38,282 netHg38,366 netHg38,376 netHg38,494 netHg38,514 netHg38,651 netHg38,656 netHg38,674 netHg38,694 netHg38,894 netHg38,969 netHg38,991 netHg38,1015 netHg38,1029 netTarSyr2,17 netTarSyr2,64 netTarSyr2,185 netTarSyr2,205 netTarSyr2,259 netTarSyr2,282 netTarSyr2,366 netTarSyr2,376 netTarSyr2,494 netTarSyr2,514 netTarSyr2,651 netTarSyr2,656 netTarSyr2,674 netTarSyr2,694 netTarSyr2,894 netTarSyr2,969 netTarSyr2,991 netTarSyr2,1015 netTarSyr2,1029 refSeqComposite,163 refSeqComposite,196 refSeqComposite,214 refSeqComposite,261 refSeqComposite,322 refSeqComposite,344 refSeqComposite,438 refSeqComposite,492 refSeqComposite,525 refSeqComposite,532 refSeqComposite,558 refSeqComposite,616 refSeqComposite,636 refSeqComposite,714 refSeqComposite,742 refSeqComposite,791 refSeqComposite,800 refSeqComposite,880 refSeqComposite,895 refSeqComposite,947 refSeqComposite,993 refSeqComposite,1011 refSeqComposite,1059 refSeqComposite,1248 refSeqComposite,1280 refSeqComposite,1353 refSeqComposite,1434 refSeqComposite,1436 refSeqComposite,1506 refSeqComposite,1576 refSeqComposite,1656 refSeqComposite,1702 refSeqComposite,1706 refSeqComposite,1812 rmsk,39 rmsk,59 rmsk,84 rmsk,151 rmsk,206 rmsk,216 rmsk,234 rmsk,246 rmsk,264 rmsk,373 rmsk,388 rmsk,401 rmsk,422 simpleRepeat,40 transMapEnsemblV5,85 transMapEnsemblV5,141 transMapEnsemblV5,170 transMapEnsemblV5,211 transMapEnsemblV5,277 transMapEnsemblV5,284 transMapEnsemblV5,300 transMapEnsemblV5,312 transMapEnsemblV5,325 transMapEnsemblV5,344 transMapEnsemblV5,363 transMapEnsemblV5,381 transMapEnsemblV5,460 transMapEnsemblV5,511 transMapEnsemblV5,554 transMapEnsemblV5,742 transMapEnsemblV5,807 transMapEstV5,54 transMapEstV5,110 transMapEstV5,139 transMapEstV5,180 transMapEstV5,246 transMapEstV5,253 transMapEstV5,269 transMapEstV5,281 transMapEstV5,294 transMapEstV5,313 transMapEstV5,332 transMapEstV5,350 transMapEstV5,429 transMapEstV5,480 transMapEstV5,523 transMapEstV5,711 transMapEstV5,776 transMapRefSeqV5,54 transMapRefSeqV5,110 transMapRefSeqV5,139 transMapRefSeqV5,180 transMapRefSeqV5,246 transMapRefSeqV5,253 transMapRefSeqV5,269 transMapRefSeqV5,281 transMapRefSeqV5,294 transMapRefSeqV5,313 transMapRefSeqV5,332 transMapRefSeqV5,350 transMapRefSeqV5,429 transMapRefSeqV5,480 transMapRefSeqV5,523 transMapRefSeqV5,711 transMapRefSeqV5,776 transMapRnaV5,54 transMapRnaV5,110 transMapRnaV5,139 transMapRnaV5,180 transMapRnaV5,246 transMapRnaV5,253 transMapRnaV5,269 transMapRnaV5,281 transMapRnaV5,294 transMapRnaV5,313 transMapRnaV5,332 transMapRnaV5,350 transMapRnaV5,429 transMapRnaV5,480 transMapRnaV5,523 transMapRnaV5,711 transMapRnaV5,776 transMapV5,55 transMapV5,216 transMapV5,245 transMapV5,286 transMapV5,352 transMapV5,359 transMapV5,375 transMapV5,387 transMapV5,400 transMapV5,419 transMapV5,438 transMapV5,456 transMapV5,535 transMapV5,586 transMapV5,629 transMapV5,817 transMapV5,882 unipAliSwissprot,5 unipAliTrembl,5 unipInterest,4 uniprot,83 uniprot,269 uniprot,298 uniprot,310 uniprot,385 uniprot,407 uniprot,420 uniprot,452 uniprot,465 uniprot,542 uniprot,561 uniprot,652 uniprot,677 uniprot,877 uniprot,902 uniprot,980 uniprot,1111 uniprot,1125 uniprot,1159 uniprot,1166 uniprot,1181 uniprot,1288 uniprot,1298 uniprot,1306 uniprot,1315 uniprot,1347 uniprot,1360 uniprot,1363 uniprot,1397 uniprot,1436 uniprot,1457 uniprot,1590 uniprot,1594 uniprot,1639 uniprot,1646 uniprot,1656 uniprot,1666 uniprot,1684 uniprot,1687 uniprot,1710 uniprot,1951 xenoRefGene,65 xenoRefGene,84 xenoRefGene,98 xenoRefGene,123 xenoRefGene,236 xenoRefGene,268 xenoRefGene,380 off chainHg38,345 chainHg38,351 chainNetHg38,348 chainNetHg38,354 chainNetTarSyr2,348 chainNetTarSyr2,354 chainTarSyr2,345 chainTarSyr2,351 netHg38,345 netHg38,351 netTarSyr2,345 netTarSyr2,351 refSeqComposite,814 xenoRefGene,136 offers genscan,79 often chainHg38,217 chainHg38,229 chainNetHg38,220 chainNetHg38,232 chainNetTarSyr2,220 chainNetTarSyr2,232 chainTarSyr2,217 chainTarSyr2,229 netHg38,217 netHg38,229 netTarSyr2,217 netTarSyr2,229 older uniprot,1560 uniprot,1647 omim refSeqComposite,788 refSeqComposite,807 omitted nestedRepeats,165 on augustusGene,29 augustusGene,37 augustusGene,151 chainHg38,333 chainHg38,359 chainHg38,462 chainHg38,476 chainHg38,526 chainHg38,531 chainHg38,546 chainHg38,781 chainNetHg38,336 chainNetHg38,362 chainNetHg38,465 chainNetHg38,479 chainNetHg38,529 chainNetHg38,534 chainNetHg38,549 chainNetHg38,784 chainNetTarSyr2,336 chainNetTarSyr2,362 chainNetTarSyr2,465 chainNetTarSyr2,479 chainNetTarSyr2,529 chainNetTarSyr2,534 chainNetTarSyr2,549 chainNetTarSyr2,784 chainTarSyr2,333 chainTarSyr2,359 chainTarSyr2,462 chainTarSyr2,476 chainTarSyr2,526 chainTarSyr2,531 chainTarSyr2,546 chainTarSyr2,781 cpgIslandExt,287 cpgIslandExt,323 cpgIslandExt,544 cpgIslandExt,551 cpgIslandExtUnmasked,5 cpgIslandExtUnmasked,290 cpgIslandExtUnmasked,326 cpgIslandExtUnmasked,547 cpgIslandExtUnmasked,554 cpgIslandSuper,287 cpgIslandSuper,323 cpgIslandSuper,544 cpgIslandSuper,551 ensGene,20 ensGene,118 ensGene,123 ensGene,129 ensGene,140 gap,87 genscan,27 genscan,52 nestedRepeats,141 nestedRepeats,176 nestedRepeats,277 netHg38,333 netHg38,359 netHg38,462 netHg38,476 netHg38,526 netHg38,531 netHg38,546 netHg38,781 netTarSyr2,333 netTarSyr2,359 netTarSyr2,462 netTarSyr2,476 netTarSyr2,526 netTarSyr2,531 netTarSyr2,546 netTarSyr2,781 refSeqComposite,133 refSeqComposite,183 refSeqComposite,240 refSeqComposite,254 refSeqComposite,362 refSeqComposite,521 refSeqComposite,574 refSeqComposite,980 refSeqComposite,1124 refSeqComposite,1606 refSeqComposite,1648 refSeqComposite,1686 refSeqComposite,1711 refSeqComposite,1780 rmsk,74 transMapEnsemblV5,573 transMapEnsemblV5,810 transMapEstV5,542 transMapEstV5,779 transMapRefSeqV5,542 transMapRefSeqV5,779 transMapRnaV5,542 transMapRnaV5,779 transMapV5,104 transMapV5,648 transMapV5,885 uniprot,19 uniprot,61 uniprot,129 uniprot,172 uniprot,232 uniprot,443 uniprot,482 uniprot,648 uniprot,728 uniprot,772 uniprot,809 uniprot,859 uniprot,1035 uniprot,1139 uniprot,1176 uniprot,1366 uniprot,1446 uniprot,1534 uniprot,1558 uniprot,1567 uniprot,1581 uniprot,1605 uniprot,1887 uniprot,2039 xenoRefGene,348 once uniprot,647 one augustusGene,169 chainHg38,193 chainHg38,367 chainHg38,513 chainHg38,808 chainHg38,904 chainNetHg38,196 chainNetHg38,370 chainNetHg38,516 chainNetHg38,811 chainNetHg38,907 chainNetTarSyr2,196 chainNetTarSyr2,370 chainNetTarSyr2,516 chainNetTarSyr2,811 chainNetTarSyr2,907 chainTarSyr2,193 chainTarSyr2,367 chainTarSyr2,513 chainTarSyr2,808 chainTarSyr2,904 cpgIslandExt,233 cpgIslandExtUnmasked,236 cpgIslandSuper,233 gold,157 netHg38,193 netHg38,367 netHg38,513 netHg38,808 netHg38,904 netTarSyr2,193 netTarSyr2,367 netTarSyr2,513 netTarSyr2,808 netTarSyr2,904 transMapV5,79 uniprot,74 uniprot,77 uniprot,155 uniprot,981 uniprot,1098 uniprot,1638 ones transMapEnsemblV5,50 uniprot,1041 ongoing uniprot,1569 only chainHg38,363 chainNetHg38,366 chainNetTarSyr2,366 chainTarSyr2,363 cpgIslandExt,196 cpgIslandExtUnmasked,199 cpgIslandSuper,196 microsat,61 netHg38,363 netTarSyr2,363 refSeqComposite,159 refSeqComposite,219 refSeqComposite,236 refSeqComposite,248 refSeqComposite,520 refSeqComposite,572 refSeqComposite,1271 refSeqComposite,1543 transMapEnsemblV5,49 transMapEnsemblV5,656 transMapEstV5,625 transMapRefSeqV5,625 transMapRnaV5,625 transMapV5,731 uniprot,645 uniprot,975 uniprot,1178 uniprot,1302 uniprot,1804 xenoRefGene,212 xenoRefGene,259 oommen transMapEnsemblV5,734 transMapEstV5,703 transMapRefSeqV5,703 transMapRnaV5,703 transMapV5,809 open-3.0 nestedRepeats,331 rmsk,354 opin nestedRepeats,385 nestedRepeats,407 rmsk,408 rmsk,430 opposite chainHg38,558 chainNetHg38,561 chainNetTarSyr2,561 chainTarSyr2,558 netHg38,558 netTarSyr2,558 option augustusGene,167 augustusGene,187 genscan,94 refSeqComposite,781 refSeqComposite,846 transMapEnsemblV5,136 transMapEstV5,105 transMapRefSeqV5,105 transMapRnaV5,105 transMapV5,211 xenoRefGene,116 xenoRefGene,168 optional refSeqComposite,824 xenoRefGene,146 options gc5BaseBw,70 genscan,85 or chainHg38,30 chainHg38,131 chainHg38,154 chainHg38,188 chainHg38,497 chainHg38,876 chainHg38,905 chainNetHg38,33 chainNetHg38,134 chainNetHg38,157 chainNetHg38,191 chainNetHg38,500 chainNetHg38,879 chainNetHg38,908 chainNetTarSyr2,33 chainNetTarSyr2,134 chainNetTarSyr2,157 chainNetTarSyr2,191 chainNetTarSyr2,500 chainNetTarSyr2,879 chainNetTarSyr2,908 chainTarSyr2,30 chainTarSyr2,131 chainTarSyr2,154 chainTarSyr2,188 chainTarSyr2,497 chainTarSyr2,876 chainTarSyr2,905 cpgIslandExt,127 cpgIslandExt,266 cpgIslandExt,523 cpgIslandExtUnmasked,130 cpgIslandExtUnmasked,269 cpgIslandExtUnmasked,526 cpgIslandSuper,127 cpgIslandSuper,266 cpgIslandSuper,523 ensGene,68 ensGene,89 ensGene,110 ncbiRefSeqOther,13 ncbiRefSeqPredicted,9 nestedRepeats,96 nestedRepeats,117 nestedRepeats,158 netHg38,30 netHg38,131 netHg38,154 netHg38,188 netHg38,497 netHg38,876 netHg38,905 netTarSyr2,30 netTarSyr2,131 netTarSyr2,154 netTarSyr2,188 netTarSyr2,497 netTarSyr2,876 netTarSyr2,905 refSeqComposite,87 refSeqComposite,123 refSeqComposite,229 refSeqComposite,281 refSeqComposite,356 refSeqComposite,402 refSeqComposite,411 refSeqComposite,417 refSeqComposite,426 refSeqComposite,627 refSeqComposite,648 refSeqComposite,696 refSeqComposite,787 refSeqComposite,797 refSeqComposite,812 refSeqComposite,956 refSeqComposite,978 refSeqComposite,1057 refSeqComposite,1320 refSeqComposite,1335 refSeqComposite,1502 refSeqComposite,1524 rmsk,251 rmsk,280 transMapEnsemblV5,19 transMapEnsemblV5,537 transMapEnsemblV5,565 transMapEnsemblV5,608 transMapEnsemblV5,628 transMapEstV5,506 transMapEstV5,534 transMapEstV5,577 transMapEstV5,597 transMapRefSeqV5,506 transMapRefSeqV5,534 transMapRefSeqV5,577 transMapRefSeqV5,597 transMapRnaV5,506 transMapRnaV5,534 transMapRnaV5,577 transMapRnaV5,597 transMapV5,47 transMapV5,612 transMapV5,640 transMapV5,683 transMapV5,703 uniprot,317 uniprot,389 uniprot,436 uniprot,829 uniprot,888 uniprot,982 uniprot,1038 uniprot,1205 uniprot,1266 uniprot,1401 uniprot,1449 uniprot,1722 uniprot,1776 uniprot,1835 uniprot,1879 xenoRefGene,134 order gap,81 gold,112 uniprot,872 organism chainHg38,342 chainHg38,372 chainNetHg38,345 chainNetHg38,375 chainNetTarSyr2,345 chainNetTarSyr2,375 chainTarSyr2,342 chainTarSyr2,372 netHg38,342 netHg38,372 netTarSyr2,342 netTarSyr2,372 organisms chainHg38,921 chainNetHg38,924 chainNetTarSyr2,924 chainTarSyr2,921 nestedRepeats,295 netHg38,921 netTarSyr2,921 rmsk,302 transMapEnsemblV5,161 transMapEnsemblV5,220 transMapEstV5,130 transMapEstV5,189 transMapRefSeqV5,130 transMapRefSeqV5,189 transMapRnaV5,130 transMapRnaV5,189 transMapV5,66 transMapV5,154 transMapV5,236 transMapV5,295 uniprot,998 xenoRefGene,22 organized refSeqComposite,1383 organizes chainHg38,628 chainNetHg38,631 chainNetTarSyr2,631 chainTarSyr2,628 netHg38,628 netTarSyr2,628 orientation chainHg38,559 chainNetHg38,562 chainNetTarSyr2,562 chainTarSyr2,559 cytoBandIdeo,6 gap,83 gold,114 netHg38,559 netTarSyr2,559 origin nestedRepeats,398 rmsk,421 original nestedRepeats,84 orthologous transMapEnsemblV5,87 transMapEstV5,56 transMapRefSeqV5,56 transMapRnaV5,56 transMapV5,57 orthologs chainHg38,296 chainNetHg38,299 chainNetTarSyr2,299 chainTarSyr2,296 netHg38,296 netTarSyr2,296 transMapV5,96 other augustusGene,208 chainHg38,24 chainHg38,424 chainHg38,517 chainNetHg38,27 chainNetHg38,427 chainNetHg38,520 chainNetTarSyr2,27 chainNetTarSyr2,427 chainNetTarSyr2,520 chainTarSyr2,24 chainTarSyr2,424 chainTarSyr2,517 cpgIslandExt,135 cpgIslandExtUnmasked,138 cpgIslandSuper,135 ncbiRefSeqOther,2 ncbiRefSeqOther,5 nestedRepeats,376 netHg38,24 netHg38,424 netHg38,517 netTarSyr2,24 netTarSyr2,424 netTarSyr2,517 refSeqComposite,276 refSeqComposite,380 refSeqComposite,383 refSeqComposite,1377 refSeqComposite,1403 rmsk,195 rmsk,399 transMapEnsemblV5,30 transMapEnsemblV5,46 transMapEnsemblV5,374 transMapEstV5,28 transMapEstV5,343 transMapRefSeqV5,28 transMapRefSeqV5,343 transMapRnaV5,28 transMapRnaV5,343 transMapV5,27 transMapV5,449 unipOther,1 unipOther,4 uniprot,90 uniprot,122 uniprot,205 uniprot,319 uniprot,393 uniprot,396 uniprot,862 uniprot,1200 xenoRefGene,1 xenoRefGene,23 others cpgIslandExt,247 cpgIslandExtUnmasked,250 cpgIslandSuper,247 nestedRepeats,214 uniprot,1312 uniprot,1344 otherwise cpgIslandExt,185 cpgIslandExtUnmasked,188 cpgIslandSuper,185 transMapEnsemblV5,250 transMapEstV5,219 transMapRefSeqV5,219 transMapRnaV5,219 transMapV5,325 ouml augustusGene,269 our augustusGene,43 cpgIslandExt,536 cpgIslandExt,545 cpgIslandExt,552 cpgIslandExtUnmasked,539 cpgIslandExtUnmasked,548 cpgIslandExtUnmasked,555 cpgIslandSuper,536 cpgIslandSuper,545 cpgIslandSuper,552 ensGene,26 ensGene,84 ensGene,91 ensGene,113 ensGene,124 ensGene,130 ensGene,141 genscan,58 refSeqComposite,139 refSeqComposite,1331 refSeqComposite,1338 refSeqComposite,1354 refSeqComposite,1369 refSeqComposite,1493 refSeqComposite,1513 refSeqComposite,1634 refSeqComposite,1687 refSeqComposite,1694 refSeqComposite,1712 rmsk,124 rmsk,129 transMapEnsemblV5,562 transMapEnsemblV5,568 transMapEnsemblV5,578 transMapEnsemblV5,617 transMapEstV5,531 transMapEstV5,537 transMapEstV5,547 transMapEstV5,586 transMapRefSeqV5,531 transMapRefSeqV5,537 transMapRefSeqV5,547 transMapRefSeqV5,586 transMapRnaV5,531 transMapRnaV5,537 transMapRnaV5,547 transMapRnaV5,586 transMapV5,637 transMapV5,643 transMapV5,653 transMapV5,692 uniprot,891 uniprot,1697 uniprot,1765 uniprot,1829 uniprot,1836 uniprot,1870 uniprot,1874 out chainHg38,650 chainNetHg38,653 chainNetTarSyr2,653 chainTarSyr2,650 netHg38,650 netTarSyr2,650 output cpgIslandExt,499 cpgIslandExtUnmasked,502 cpgIslandSuper,499 nestedRepeats,26 nestedRepeats,110 windowmaskerSdust,63 windowmaskerSdust,72 outputs rmsk,35 outside refSeqComposite,694 uniprot,558 over chainHg38,201 chainHg38,665 chainNetHg38,204 chainNetHg38,668 chainNetTarSyr2,204 chainNetTarSyr2,668 chainTarSyr2,201 chainTarSyr2,665 cpgIslandExt,97 cpgIslandExtUnmasked,100 cpgIslandSuper,97 netHg38,201 netHg38,665 netTarSyr2,201 netTarSyr2,665 refSeqComposite,1039 uniprot,522 uniprot,536 overlapping chainHg38,116 chainHg38,181 chainNetHg38,119 chainNetHg38,184 chainNetTarSyr2,119 chainNetTarSyr2,184 chainTarSyr2,116 chainTarSyr2,181 netHg38,116 netHg38,181 netTarSyr2,116 netTarSyr2,181 own uniprot,724 p genscan,205 nestedRepeats,329 rmsk,352 pac chainHg38,1049 chainNetHg38,1052 chainNetTarSyr2,1052 chainTarSyr2,1049 netHg38,1049 netTarSyr2,1049 pack chainHg38,239 chainNetHg38,242 chainNetTarSyr2,242 chainTarSyr2,239 nestedRepeats,116 netHg38,239 netTarSyr2,239 page cpgIslandExt,223 cpgIslandExt,547 cpgIslandExtUnmasked,226 cpgIslandExtUnmasked,550 cpgIslandSuper,223 cpgIslandSuper,547 ensGene,127 ensGene,166 genscan,78 genscan,123 refSeqComposite,115 refSeqComposite,746 refSeqComposite,871 refSeqComposite,1131 refSeqComposite,1651 rmsk,77 uniprot,236 uniprot,651 uniprot,1158 uniprot,1585 uniprot,2027 xenoRefGene,102 xenoRefGene,193 pages chainHg38,786 chainNetHg38,789 chainNetTarSyr2,789 chainTarSyr2,786 netHg38,786 netTarSyr2,786 pair gap,97 pairwise chainHg38,1027 chainHg38,1045 chainNetHg38,1030 chainNetHg38,1048 chainNetTarSyr2,1030 chainNetTarSyr2,1048 chainTarSyr2,1027 chainTarSyr2,1045 netHg38,1027 netHg38,1045 netTarSyr2,1027 netTarSyr2,1045 transMapEnsemblV5,342 transMapEstV5,311 transMapRefSeqV5,311 transMapRnaV5,311 transMapV5,85 transMapV5,417 paralogous transMapEnsemblV5,304 transMapEstV5,273 transMapRefSeqV5,273 transMapRnaV5,273 transMapV5,379 paralogs chainHg38,232 chainNetHg38,235 chainNetTarSyr2,235 chainTarSyr2,232 netHg38,232 netTarSyr2,232 transMapV5,162 parameters windowmaskerSdust,57 parent cpgIslandExt,83 cpgIslandExtUnmasked,86 cpgIslandSuper,83 parentheses gold,149 part chainHg38,281 chainNetHg38,284 chainNetTarSyr2,284 chainTarSyr2,281 netHg38,281 netTarSyr2,281 refSeqComposite,531 particular augustusGene,234 chainHg38,203 chainNetHg38,206 chainNetTarSyr2,206 chainTarSyr2,203 netHg38,203 netTarSyr2,203 refSeqComposite,298 uniprot,1019 particularly cpgIslandExt,21 cpgIslandExtUnmasked,24 cpgIslandSuper,21 parts chainHg38,39 chainHg38,50 chainNetHg38,42 chainNetHg38,53 chainNetTarSyr2,42 chainNetTarSyr2,53 chainTarSyr2,39 chainTarSyr2,50 netHg38,39 netHg38,50 netTarSyr2,39 netTarSyr2,50 past uniprot,1690 patch uniprot,1423 patches uniprot,1432 patterns augustusGene,56 pennsylvania chainHg38,932 chainHg38,1035 chainNetHg38,935 chainNetHg38,1038 chainNetTarSyr2,935 chainNetTarSyr2,1038 chainTarSyr2,932 chainTarSyr2,1035 netHg38,932 netHg38,1035 netTarSyr2,932 netTarSyr2,1035 peptide unipLocSignal,2 uniprot,477 uniprot,565 peptides unipLocSignal,5 uniprot,239 uniprot,512 percent gc5BaseBw,2 gc5BaseBw,4 gc5BaseBw,14 percentage cpgIslandExt,345 cpgIslandExtUnmasked,348 cpgIslandSuper,345 gc5BaseBw,18 perfect microsat,31 performed cpgIslandExt,405 cpgIslandExtUnmasked,408 cpgIslandSuper,405 perhaps cpgIslandExt,137 cpgIslandExtUnmasked,140 cpgIslandSuper,137 period microsat,65 permitted rmsk,314 ph.d chainHg38,1032 chainNetHg38,1035 chainNetTarSyr2,1035 chainTarSyr2,1032 netHg38,1032 netTarSyr2,1032 pharmaceuticals uniprot,1969 phenotype uniprot,432 phosphorylation uniprot,590 phylofit transMapEnsemblV5,232 transMapEstV5,201 transMapRefSeqV5,201 transMapRnaV5,201 transMapV5,307 pia uniprot,1971 pick uniprot,1089 pipeline refSeqComposite,1197 uniprot,1537 pipelines uniprot,1850 place chainHg38,805 chainNetHg38,808 chainNetTarSyr2,808 chainTarSyr2,805 netHg38,805 netTarSyr2,805 placed chainHg38,847 chainNetHg38,850 chainNetTarSyr2,850 chainTarSyr2,847 netHg38,847 netTarSyr2,847 placement refSeqComposite,972 places refSeqComposite,1261 xenoRefGene,249 please ensGene,41 ensGene,160 refSeqComposite,104 refSeqComposite,1117 refSeqComposite,1691 uniprot,685 uniprot,1439 uniprot,1826 plos transMapEnsemblV5,814 transMapEstV5,783 transMapRefSeqV5,783 transMapRnaV5,783 transMapV5,889 plus refSeqComposite,906 pmc chainHg38,1094 chainHg38,1125 chainNetHg38,1097 chainNetHg38,1128 chainNetTarSyr2,1097 chainNetTarSyr2,1128 chainTarSyr2,1094 chainTarSyr2,1125 ensGene,206 microsat,136 netHg38,1094 netHg38,1125 netTarSyr2,1094 netTarSyr2,1125 refSeqComposite,1753 refSeqComposite,1795 refSeqComposite,1829 simpleRepeat,96 transMapEnsemblV5,758 transMapEnsemblV5,824 transMapEstV5,727 transMapEstV5,793 transMapRefSeqV5,727 transMapRefSeqV5,793 transMapRnaV5,727 transMapRnaV5,793 transMapV5,833 transMapV5,899 uniprot,2008 xenoRefGene,321 xenoRefGene,363 xenoRefGene,397 pmc148217 microsat,137 simpleRepeat,97 pmc187518 refSeqComposite,1754 xenoRefGene,322 pmc208784 chainHg38,1095 chainNetHg38,1098 chainNetTarSyr2,1098 chainTarSyr2,1095 netHg38,1095 netTarSyr2,1095 pmc2099585 transMapEnsemblV5,759 transMapEstV5,728 transMapRefSeqV5,728 transMapRnaV5,728 transMapV5,834 pmc2134963 transMapEnsemblV5,825 transMapEstV5,794 transMapRefSeqV5,794 transMapRnaV5,794 transMapV5,900 pmc3245120 uniprot,2009 pmc3965018 refSeqComposite,1796 xenoRefGene,364 pmc430961 chainHg38,1126 chainNetHg38,1129 chainNetTarSyr2,1129 chainTarSyr2,1126 netHg38,1126 netTarSyr2,1126 pmc539979 refSeqComposite,1830 xenoRefGene,398 pmc99161 ensGene,207 pmid augustusGene,314 augustusGene,339 chainHg38,1054 chainHg38,1092 chainHg38,1123 chainNetHg38,1057 chainNetHg38,1095 chainNetHg38,1126 chainNetTarSyr2,1057 chainNetTarSyr2,1095 chainNetTarSyr2,1126 chainTarSyr2,1054 chainTarSyr2,1092 chainTarSyr2,1123 cpgIslandExt,622 cpgIslandExtUnmasked,625 cpgIslandSuper,622 ensGene,204 genscan,229 microsat,134 nestedRepeats,360 nestedRepeats,393 nestedRepeats,415 netHg38,1054 netHg38,1092 netHg38,1123 netTarSyr2,1054 netTarSyr2,1092 netTarSyr2,1123 refSeqComposite,1751 refSeqComposite,1793 refSeqComposite,1827 rmsk,383 rmsk,416 rmsk,438 simpleRepeat,94 transMapEnsemblV5,756 transMapEnsemblV5,788 transMapEnsemblV5,822 transMapEstV5,725 transMapEstV5,757 transMapEstV5,791 transMapRefSeqV5,725 transMapRefSeqV5,757 transMapRefSeqV5,791 transMapRnaV5,725 transMapRnaV5,757 transMapRnaV5,791 transMapV5,831 transMapV5,863 transMapV5,897 uniprot,2006 uniprot,2050 windowmaskerSdust,113 xenoRefGene,319 xenoRefGene,361 xenoRefGene,395 point rmsk,269 poly-a augustusGene,62 polymorphic microsat,41 simpleRepeat,46 polypeptide unipChain,6 uniprot,287 uniprot,289 population microsat,44 position chainHg38,721 chainNetHg38,724 chainNetTarSyr2,724 chainTarSyr2,721 netHg38,721 netTarSyr2,721 refSeqComposite,991 uniprot,610 positions uniprot,1495 possible chainHg38,418 chainNetHg38,421 chainNetTarSyr2,421 chainTarSyr2,418 netHg38,418 netTarSyr2,418 refSeqComposite,187 uniprot,601 possibly chainHg38,295 chainNetHg38,298 chainNetTarSyr2,298 chainTarSyr2,295 netHg38,295 netTarSyr2,295 simpleRepeat,18 post-alignment transMapEnsemblV5,307 transMapEstV5,276 transMapRefSeqV5,276 transMapRnaV5,276 transMapV5,382 post-processing uniprot,295 potential cpgIslandExt,175 cpgIslandExtUnmasked,178 cpgIslandSuper,175 pre-mrna genscan,185 precompiled refSeqComposite,1528 transMapEnsemblV5,632 transMapEstV5,601 transMapRefSeqV5,601 transMapRnaV5,601 transMapV5,707 uniprot,1780 predicted cpgIslandExt,228 cpgIslandExtUnmasked,231 cpgIslandSuper,228 ncbiRefSeq,8 ncbiRefSeqPredicted,2 ncbiRefSeqPredicted,6 refSeqComposite,205 refSeqComposite,341 refSeqComposite,360 refSeqComposite,405 refSeqComposite,597 refSeqComposite,623 refSeqComposite,699 refSeqComposite,719 refSeqComposite,1421 refSeqComposite,1681 uniprot,48 uniprot,193 xenoRefGene,72 prediction augustusGene,321 genscan,73 genscan,211 refSeqComposite,377 refSeqComposite,608 transMapEnsemblV5,84 transMapEstV5,53 transMapRefSeqV5,53 transMapRnaV5,53 transMapV5,54 xenoRefGene,57 predictions augustusGene,6 augustusGene,11 augustusGene,18 augustusGene,26 augustusGene,191 ensGene,8 ensGene,12 ensGene,40 genscan,5 genscan,9 genscan,14 genscan,24 genscan,112 genscan,118 ncbiRefSeq,18 ncbiRefSeqGenomicDiff,15 ncbiRefSeqOther,18 ncbiRefSeqPredicted,14 ncbiRefSeqPsl,10 refSeqComposite,10 refSeqComposite,837 refSeqComposite,866 transMapEnsemblV5,13 transMapEstV5,11 transMapRefSeqV5,12 transMapRnaV5,12 transMapV5,10 unipAliSwissprot,21 unipAliTrembl,13 unipChain,11 unipConflict,9 unipDisulfBond,9 unipDomain,7 unipInterest,9 unipLocCytopl,8 unipLocExtra,8 unipLocSignal,9 unipLocTransMemb,8 unipModif,10 unipMut,9 unipOther,9 unipRepeat,7 unipStruct,11 uniprot,10 xenoRefGene,11 xenoRefGene,159 xenoRefGene,188 prepared gc5BaseBw,80 ucscToINSDC,49 ucscToRefSeq,43 uniprot,712 present cpgIslandExt,154 cpgIslandExtUnmasked,157 cpgIslandSuper,154 rmsk,44 presentation gc5BaseBw,75 pressure cpgIslandExt,123 cpgIslandExtUnmasked,126 cpgIslandSuper,123 previous ensGene,132 refSeqComposite,1228 refSeqComposite,1345 refSeqComposite,1700 uniprot,1654 previously chainHg38,925 chainNetHg38,928 chainNetTarSyr2,928 chainTarSyr2,925 netHg38,925 netTarSyr2,925 refSeqComposite,508 primary unipStruct,4 uniprot,360 principal gap,122 pringle transMapEnsemblV5,798 transMapEstV5,767 transMapRefSeqV5,767 transMapRnaV5,767 transMapV5,873 printf cpgIslandExt,435 cpgIslandExtUnmasked,438 cpgIslandSuper,435 problem uniprot,1359 uniprot,1389 proc chainHg38,1079 chainNetHg38,1082 chainNetTarSyr2,1082 chainTarSyr2,1079 netHg38,1079 netTarSyr2,1079 procedure uniprot,990 procedures gap,24 gold,26 process chainHg38,829 chainNetHg38,832 chainNetTarSyr2,832 chainTarSyr2,829 netHg38,829 netTarSyr2,829 refSeqComposite,655 uniprot,321 uniprot,879 uniprot,905 uniprot,1229 uniprot,1448 processed chainHg38,220 chainNetHg38,223 chainNetTarSyr2,223 chainTarSyr2,220 netHg38,220 netTarSyr2,220 processing refSeqComposite,1343 produced refSeqComposite,385 refSeqComposite,1720 transMapEnsemblV5,22 transMapEnsemblV5,683 transMapEnsemblV5,707 transMapEstV5,20 transMapEstV5,652 transMapEstV5,676 transMapRefSeqV5,20 transMapRefSeqV5,652 transMapRefSeqV5,676 transMapRnaV5,20 transMapRnaV5,652 transMapRnaV5,676 transMapV5,19 transMapV5,143 transMapV5,758 transMapV5,782 xenoRefGene,287 produces refSeqComposite,50 products unipChain,5 program augustusGene,21 augustusGene,257 chainHg38,619 chainHg38,661 chainHg38,799 chainHg38,852 chainHg38,884 chainHg38,960 chainHg38,963 chainNetHg38,622 chainNetHg38,664 chainNetHg38,802 chainNetHg38,855 chainNetHg38,887 chainNetHg38,963 chainNetHg38,966 chainNetTarSyr2,622 chainNetTarSyr2,664 chainNetTarSyr2,802 chainNetTarSyr2,855 chainNetTarSyr2,887 chainNetTarSyr2,963 chainNetTarSyr2,966 chainTarSyr2,619 chainTarSyr2,661 chainTarSyr2,799 chainTarSyr2,852 chainTarSyr2,884 chainTarSyr2,960 chainTarSyr2,963 cpgIslandExt,559 cpgIslandExt,569 cpgIslandExt,594 cpgIslandExtUnmasked,562 cpgIslandExtUnmasked,572 cpgIslandExtUnmasked,597 cpgIslandSuper,559 cpgIslandSuper,569 cpgIslandSuper,594 genscan,18 genscan,137 genscan,178 microsat,100 microsat,120 nestedRepeats,30 netHg38,619 netHg38,661 netHg38,799 netHg38,852 netHg38,884 netHg38,960 netHg38,963 netTarSyr2,619 netTarSyr2,661 netTarSyr2,799 netTarSyr2,852 netTarSyr2,884 netTarSyr2,960 netTarSyr2,963 rmsk,20 rmsk,34 simpleRepeat,62 simpleRepeat,80 transMapEnsemblV5,317 transMapEstV5,286 transMapRefSeqV5,286 transMapRnaV5,286 transMapV5,392 uniprot,1529 programmatic ensGene,99 programmatically refSeqComposite,1329 programs chainHg38,1009 chainNetHg38,1012 chainNetTarSyr2,1012 chainTarSyr2,1009 netHg38,1009 netTarSyr2,1009 uniprot,1877 project ensGene,194 refSeqComposite,1166 refSeqComposite,1735 xenoRefGene,304 projected uniprot,800 projection transMapEnsemblV5,57 transMapEnsemblV5,324 transMapEstV5,293 transMapRefSeqV5,293 transMapRnaV5,293 transMapV5,399 projects transMapEnsemblV5,715 transMapEstV5,684 transMapRefSeqV5,684 transMapRnaV5,684 transMapV5,790 promoter cpgIslandExt,40 cpgIslandExtUnmasked,43 cpgIslandSuper,40 pronounced uniprot,1392 proofreading cpgIslandExt,93 cpgIslandExtUnmasked,96 cpgIslandSuper,93 properties refSeqComposite,726 prot.bed uniprot,1931 uniprot,1933 protein refSeqComposite,270 refSeqComposite,363 unipChain,4 unipStruct,3 uniprot,5 uniprot,15 uniprot,84 uniprot,95 uniprot,111 uniprot,113 uniprot,137 uniprot,153 uniprot,194 uniprot,196 uniprot,252 uniprot,256 uniprot,267 uniprot,278 uniprot,293 uniprot,324 uniprot,359 uniprot,635 uniprot,672 uniprot,742 uniprot,760 uniprot,780 uniprot,790 uniprot,906 uniprot,916 uniprot,954 uniprot,966 uniprot,970 uniprot,1020 uniprot,1037 uniprot,1072 uniprot,1099 uniprot,1218 uniprot,1241 uniprot,1244 uniprot,1333 uniprot,1607 uniprot,1635 uniprot,1854 uniprot,1888 uniprot,1989 uniprot,1994 uniprot,2041 protein-coding augustusGene,73 refSeqComposite,22 refSeqComposite,238 refSeqComposite,547 xenoRefGene,17 xenoRefGene,201 protein-genome uniprot,875 uniprot,1174 protein-protein uniprot,315 protein-to-genome uniprot,1703 proteins refSeqComposite,1816 unipAliSwissprot,7 unipAliTrembl,7 uniprot,243 uniprot,744 uniprot,925 uniprot,929 uniprot,1005 uniprot,1188 uniprot,1364 uniprot,1385 uniprot,1404 uniprot,1470 xenoRefGene,384 protocadherin refSeqComposite,418 provide uniprot,1860 provided refSeqComposite,39 refSeqComposite,70 refSeqComposite,207 refSeqComposite,447 uniprot,817 provides gap,34 gold,36 uniprot,489 providing augustusGene,254 ensGene,153 genscan,175 nestedRepeats,312 rmsk,335 provisional refSeqComposite,625 refSeqComposite,674 xenoRefGene,74 pruitt refSeqComposite,1755 refSeqComposite,1797 xenoRefGene,323 xenoRefGene,365 pseudogenes chainHg38,221 chainHg38,235 chainNetHg38,224 chainNetHg38,238 chainNetTarSyr2,224 chainNetTarSyr2,238 chainTarSyr2,221 chainTarSyr2,235 netHg38,221 netHg38,235 netTarSyr2,221 netTarSyr2,235 refSeqComposite,410 uniprot,1184 psl refSeqComposite,457 refSeqComposite,1183 refSeqComposite,1426 transMapEnsemblV5,104 transMapEstV5,73 transMapRefSeqV5,73 transMapRnaV5,73 transMapV5,179 uniprot,1479 pslcdnafilter transMapEnsemblV5,357 transMapEstV5,326 transMapRefSeqV5,326 transMapRnaV5,326 transMapV5,432 pslmap transMapEnsemblV5,316 transMapEstV5,285 transMapRefSeqV5,285 transMapRnaV5,285 transMapV5,391 uniprot,889 uniprot,1497 uniprot,1528 uniprot,1880 uniprot,1900 pslreps uniprot,1482 uniprot,1502 public cpgIslandExt,537 cpgIslandExtUnmasked,540 cpgIslandSuper,537 ensGene,114 refSeqComposite,1332 refSeqComposite,1635 transMapEnsemblV5,699 transMapEstV5,668 transMapRefSeqV5,668 transMapRnaV5,668 transMapV5,774 uniprot,709 publications refSeqComposite,255 refSeqComposite,425 uniprot,38 publicly nestedRepeats,275 pull-down refSeqComposite,853 xenoRefGene,175 purpose simpleRepeat,32 q uniprot,1904 uniprot,1914 q99697 uniprot,1926 qgap chainHg38,733 chainNetHg38,736 chainNetTarSyr2,736 chainTarSyr2,733 netHg38,733 netTarSyr2,733 queried cpgIslandExt,533 cpgIslandExtUnmasked,536 cpgIslandSuper,533 ensGene,105 transMapEnsemblV5,566 transMapEstV5,535 transMapRefSeqV5,535 transMapRnaV5,535 transMapV5,641 query rmsk,47 rmsk,61 uniprot,1484 questions refSeqComposite,1699 uniprot,1834 quickly refSeqComposite,832 transMapEnsemblV5,124 transMapEstV5,93 transMapRefSeqV5,93 transMapRnaV5,93 transMapV5,199 xenoRefGene,154 quite simpleRepeat,45 quot chainHg38,26 chainHg38,28 chainHg38,33 chainHg38,35 chainHg38,105 chainHg38,107 chainHg38,238 chainHg38,240 chainHg38,242 chainHg38,244 chainHg38,350 chainHg38,352 chainHg38,695 chainHg38,697 chainNetHg38,29 chainNetHg38,31 chainNetHg38,36 chainNetHg38,38 chainNetHg38,108 chainNetHg38,110 chainNetHg38,241 chainNetHg38,243 chainNetHg38,245 chainNetHg38,247 chainNetHg38,353 chainNetHg38,355 chainNetHg38,698 chainNetHg38,700 chainNetTarSyr2,29 chainNetTarSyr2,31 chainNetTarSyr2,36 chainNetTarSyr2,38 chainNetTarSyr2,108 chainNetTarSyr2,110 chainNetTarSyr2,241 chainNetTarSyr2,243 chainNetTarSyr2,245 chainNetTarSyr2,247 chainNetTarSyr2,353 chainNetTarSyr2,355 chainNetTarSyr2,698 chainNetTarSyr2,700 chainTarSyr2,26 chainTarSyr2,28 chainTarSyr2,33 chainTarSyr2,35 chainTarSyr2,105 chainTarSyr2,107 chainTarSyr2,238 chainTarSyr2,240 chainTarSyr2,242 chainTarSyr2,244 chainTarSyr2,350 chainTarSyr2,352 chainTarSyr2,695 chainTarSyr2,697 gc5BaseBw,58 gc5BaseBw,62 netHg38,26 netHg38,28 netHg38,33 netHg38,35 netHg38,105 netHg38,107 netHg38,238 netHg38,240 netHg38,242 netHg38,244 netHg38,350 netHg38,352 netHg38,695 netHg38,697 netTarSyr2,26 netTarSyr2,28 netTarSyr2,33 netTarSyr2,35 netTarSyr2,105 netTarSyr2,107 netTarSyr2,238 netTarSyr2,240 netTarSyr2,242 netTarSyr2,244 netTarSyr2,350 netTarSyr2,352 netTarSyr2,695 netTarSyr2,697 refSeqComposite,512 refSeqComposite,515 refSeqComposite,1440 refSeqComposite,1442 rmsk,130 rmsk,133 rmsk,241 rmsk,242 rmsk,248 rmsk,250 rmsk,252 rmsk,254 rmsk,275 rmsk,276 uniprot,63 uniprot,66 uniprot,261 uniprot,263 uniprot,272 uniprot,274 uniprot,283 uniprot,285 uniprot,412 uniprot,416 uniprot,423 uniprot,426 uniprot,431 uniprot,435 uniprot,437 uniprot,441 uniprot,468 uniprot,470 uniprot,471 uniprot,474 uniprot,475 uniprot,478 uniprot,572 uniprot,575 windowmaskerSdust,82 windowmaskerSdust,84 r augustusGene,291 chainHg38,1059 chainHg38,1105 chainNetHg38,1062 chainNetHg38,1108 chainNetTarSyr2,1062 chainNetTarSyr2,1108 chainTarSyr2,1059 chainTarSyr2,1105 nestedRepeats,327 netHg38,1059 netHg38,1105 netTarSyr2,1059 netTarSyr2,1105 rmsk,350 transMapEnsemblV5,765 transMapEstV5,734 transMapRefSeqV5,734 transMapRnaV5,734 transMapV5,840 windowmaskerSdust,99 r.s chainHg38,1024 chainNetHg38,1027 chainNetTarSyr2,1027 chainTarSyr2,1024 netHg38,1024 netTarSyr2,1024 random augustusGene,119 raney uniprot,1960 range gap,136 nestedRepeats,227 nestedRepeats,236 refSeqComposite,992 transMapEnsemblV5,661 transMapEstV5,630 transMapRefSeqV5,630 transMapRnaV5,630 transMapV5,736 uniprot,1809 ranked chainHg38,796 chainNetHg38,799 chainNetTarSyr2,799 chainTarSyr2,796 netHg38,796 netTarSyr2,796 rare cpgIslandExt,57 cpgIslandExt,118 cpgIslandExtUnmasked,60 cpgIslandExtUnmasked,121 cpgIslandSuper,57 cpgIslandSuper,118 ratio cpgIslandExt,273 cpgIslandExt,349 cpgIslandExt,362 cpgIslandExtUnmasked,276 cpgIslandExtUnmasked,352 cpgIslandExtUnmasked,365 cpgIslandSuper,273 cpgIslandSuper,349 cpgIslandSuper,362 raw refSeqComposite,1298 transMapEnsemblV5,524 transMapEstV5,493 transMapRefSeqV5,493 transMapRnaV5,493 transMapV5,599 uniprot,1708 rc chainHg38,1107 chainNetHg38,1110 chainNetTarSyr2,1110 chainTarSyr2,1107 netHg38,1107 netTarSyr2,1107 rmsk,200 read gap,96 refSeqComposite,1467 realigning refSeqComposite,52 realignment refSeqComposite,60 refSeqComposite,491 rearrangement chainHg38,301 chainHg38,504 chainHg38,1072 chainNetHg38,304 chainNetHg38,507 chainNetHg38,1075 chainNetTarSyr2,304 chainNetTarSyr2,507 chainNetTarSyr2,1075 chainTarSyr2,301 chainTarSyr2,504 chainTarSyr2,1072 netHg38,301 netHg38,504 netHg38,1072 netTarSyr2,301 netTarSyr2,504 netTarSyr2,1072 rearrangements nestedRepeats,99 reason cpgIslandExt,136 cpgIslandExtUnmasked,139 cpgIslandSuper,136 recently uniprot,1186 reciprocal transMapEnsemblV5,243 transMapEstV5,212 transMapRefSeqV5,212 transMapRnaV5,212 transMapV5,67 transMapV5,318 record refSeqComposite,620 refSeqComposite,641 refSeqComposite,677 refSeqComposite,702 refSeqComposite,717 uniprot,496 xenoRefGene,69 records refSeqComposite,129 refSeqComposite,666 refer ensGene,42 genscan,144 refSeqComposite,1692 uniprot,1827 reference ncbiRefSeqGenomicDiff,10 refSeqComposite,31 refSeqComposite,112 refSeqComposite,469 refSeqComposite,884 refSeqComposite,1094 refSeqComposite,1782 refSeqComposite,1804 ucscToRefSeq,23 uniprot,1378 uniprot,1422 xenoRefGene,33 xenoRefGene,350 xenoRefGene,372 references augustusGene,285 chainHg38,1022 chainNetHg38,1025 chainNetTarSyr2,1025 chainTarSyr2,1022 cpgIslandExt,603 cpgIslandExtUnmasked,606 cpgIslandSuper,603 ensGene,52 ensGene,167 genscan,152 genscan,179 microsat,113 nestedRepeats,66 nestedRepeats,323 netHg38,1022 netTarSyr2,1022 refSeqComposite,1736 rmsk,102 rmsk,346 simpleRepeat,73 transMapEnsemblV5,716 transMapEstV5,685 transMapRefSeqV5,685 transMapRnaV5,685 transMapV5,791 uniprot,1984 windowmaskerSdust,89 xenoRefGene,305 refgene refSeqComposite,1425 transMapEnsemblV5,598 transMapEstV5,567 transMapRefSeqV5,2 transMapRefSeqV5,567 transMapRnaV5,567 transMapV5,673 reflects rmsk,213 refseq ncbiRefSeq,1 ncbiRefSeq,4 ncbiRefSeqGenomicDiff,1 ncbiRefSeqGenomicDiff,6 ncbiRefSeqOther,1 ncbiRefSeqOther,4 ncbiRefSeqPredicted,1 ncbiRefSeqPredicted,4 ncbiRefSeqPsl,1 ncbiRefSeqPsl,3 refSeqComposite,2 refSeqComposite,3 refSeqComposite,14 refSeqComposite,34 refSeqComposite,41 refSeqComposite,46 refSeqComposite,54 refSeqComposite,85 refSeqComposite,88 refSeqComposite,114 refSeqComposite,128 refSeqComposite,190 refSeqComposite,197 refSeqComposite,199 refSeqComposite,209 refSeqComposite,210 refSeqComposite,215 refSeqComposite,315 refSeqComposite,336 refSeqComposite,340 refSeqComposite,345 refSeqComposite,379 refSeqComposite,388 refSeqComposite,400 refSeqComposite,404 refSeqComposite,434 refSeqComposite,439 refSeqComposite,450 refSeqComposite,459 refSeqComposite,473 refSeqComposite,484 refSeqComposite,513 refSeqComposite,517 refSeqComposite,526 refSeqComposite,534 refSeqComposite,551 refSeqComposite,553 refSeqComposite,559 refSeqComposite,586 refSeqComposite,592 refSeqComposite,594 refSeqComposite,596 refSeqComposite,600 refSeqComposite,619 refSeqComposite,633 refSeqComposite,640 refSeqComposite,665 refSeqComposite,676 refSeqComposite,701 refSeqComposite,716 refSeqComposite,873 refSeqComposite,889 refSeqComposite,1100 refSeqComposite,1120 refSeqComposite,1135 refSeqComposite,1149 refSeqComposite,1152 refSeqComposite,1165 refSeqComposite,1172 refSeqComposite,1203 refSeqComposite,1213 refSeqComposite,1218 refSeqComposite,1229 refSeqComposite,1232 refSeqComposite,1362 refSeqComposite,1376 refSeqComposite,1379 refSeqComposite,1414 refSeqComposite,1417 refSeqComposite,1420 refSeqComposite,1424 refSeqComposite,1428 refSeqComposite,1578 refSeqComposite,1675 refSeqComposite,1677 refSeqComposite,1680 refSeqComposite,1734 refSeqComposite,1777 refSeqComposite,1806 transMapEnsemblV5,171 transMapEnsemblV5,710 transMapEstV5,140 transMapEstV5,679 transMapRefSeqV5,4 transMapRefSeqV5,17 transMapRefSeqV5,140 transMapRefSeqV5,679 transMapRnaV5,140 transMapRnaV5,679 transMapV5,246 transMapV5,785 ucscToRefSeq,1 ucscToRefSeq,3 ucscToRefSeq,26 uniprot,823 uniprot,828 uniprot,841 uniprot,845 uniprot,857 uniprot,864 uniprot,1002 uniprot,1010 uniprot,1055 uniprot,1207 uniprot,1236 uniprot,1276 uniprot,1290 xenoRefGene,2 xenoRefGene,6 xenoRefGene,36 xenoRefGene,68 xenoRefGene,303 xenoRefGene,345 xenoRefGene,374 refseqdiffs refSeqComposite,1481 refseqother refSeqComposite,1479 regeneron uniprot,1968 region chainHg38,204 chainHg38,407 chainNetHg38,207 chainNetHg38,410 chainNetTarSyr2,207 chainNetTarSyr2,410 chainTarSyr2,204 chainTarSyr2,407 cpgIslandExt,129 cpgIslandExtUnmasked,132 cpgIslandSuper,129 netHg38,204 netHg38,407 netTarSyr2,204 netTarSyr2,407 refSeqComposite,995 refSeqComposite,1548 uniprot,312 regions augustusGene,76 chainHg38,16 chainHg38,138 chainHg38,294 chainNetHg38,19 chainNetHg38,141 chainNetHg38,297 chainNetTarSyr2,19 chainNetTarSyr2,141 chainNetTarSyr2,297 chainTarSyr2,16 chainTarSyr2,138 chainTarSyr2,294 cpgIslandExt,41 cpgIslandExt,150 cpgIslandExt,182 cpgIslandExtUnmasked,44 cpgIslandExtUnmasked,153 cpgIslandExtUnmasked,185 cpgIslandSuper,41 cpgIslandSuper,150 cpgIslandSuper,182 genscan,48 microsat,14 netHg38,16 netHg38,138 netHg38,294 netTarSyr2,16 netTarSyr2,138 netTarSyr2,294 refSeqComposite,1501 simpleRepeat,39 transMapEnsemblV5,305 transMapEnsemblV5,607 transMapEstV5,274 transMapEstV5,576 transMapRefSeqV5,274 transMapRefSeqV5,576 transMapRnaV5,274 transMapRnaV5,576 transMapV5,380 transMapV5,682 unipInterest,3 uniprot,240 uniprot,297 uniprot,300 uniprot,328 uniprot,348 uniprot,368 uniprot,384 regulation cpgIslandExt,13 cpgIslandExt,143 cpgIslandExtUnmasked,16 cpgIslandExtUnmasked,146 cpgIslandSuper,13 cpgIslandSuper,143 related augustusGene,242 transMapV5,76 uniprot,551 relationship chainHg38,862 chainNetHg38,865 chainNetTarSyr2,865 chainTarSyr2,862 netHg38,862 netTarSyr2,862 relative chainHg38,878 chainNetHg38,881 chainNetTarSyr2,881 chainTarSyr2,878 gap,80 gold,111 netHg38,878 netTarSyr2,878 relatively cpgIslandExt,117 cpgIslandExtUnmasked,120 cpgIslandSuper,117 release refSeqComposite,1122 uniprot,1589 releases uniprot,1561 uniprot,1686 relevant uniprot,681 remain uniprot,1189 remaining chainHg38,701 chainNetHg38,704 chainNetTarSyr2,704 chainTarSyr2,701 netHg38,701 netTarSyr2,701 removed chainHg38,590 chainNetHg38,593 chainNetTarSyr2,593 chainTarSyr2,590 cpgIslandExt,331 cpgIslandExtUnmasked,334 cpgIslandSuper,331 netHg38,590 netTarSyr2,590 rmsk,279 uniprot,597 uniprot,1150 removes transMapEnsemblV5,310 transMapEstV5,279 transMapRefSeqV5,279 transMapRnaV5,279 transMapV5,385 reorganizing uniprot,1987 repbase nestedRepeats,45 nestedRepeats,57 nestedRepeats,335 nestedRepeats,342 rmsk,81 rmsk,93 rmsk,114 rmsk,358 rmsk,365 repeat cpgIslandExt,181 cpgIslandExt,191 cpgIslandExtUnmasked,184 cpgIslandExtUnmasked,194 cpgIslandSuper,181 cpgIslandSuper,191 microsat,83 nestedRepeats,85 nestedRepeats,122 nestedRepeats,135 nestedRepeats,257 nestedRepeats,316 rmsk,168 rmsk,175 rmsk,227 rmsk,339 simpleRepeat,47 repeated uniprot,386 uniprot,390 repeating rmsk,2 repeatmasker chainHg38,959 chainNetHg38,962 chainNetTarSyr2,962 chainTarSyr2,959 nestedRepeats,9 nestedRepeats,29 nestedRepeats,73 nestedRepeats,77 nestedRepeats,109 nestedRepeats,254 nestedRepeats,285 nestedRepeats,330 netHg38,959 netTarSyr2,959 rmsk,1 rmsk,5 rmsk,19 rmsk,78 rmsk,292 rmsk,353 repeats chainHg38,951 chainNetHg38,954 chainNetTarSyr2,954 chainTarSyr2,951 microsat,6 microsat,9 microsat,35 microsat,58 microsat,63 microsat,86 microsat,93 microsat,106 microsat,117 nestedRepeats,6 nestedRepeats,13 nestedRepeats,22 nestedRepeats,37 nestedRepeats,49 nestedRepeats,95 nestedRepeats,366 nestedRepeats,374 nestedRepeats,401 netHg38,951 netTarSyr2,951 rmsk,8 rmsk,27 rmsk,41 rmsk,68 rmsk,85 rmsk,152 rmsk,179 rmsk,183 rmsk,185 rmsk,187 rmsk,196 rmsk,303 rmsk,310 rmsk,389 rmsk,397 rmsk,424 simpleRepeat,2 simpleRepeat,5 simpleRepeat,10 simpleRepeat,17 simpleRepeat,20 simpleRepeat,24 simpleRepeat,34 simpleRepeat,77 unipRepeat,1 unipRepeat,3 uniprot,383 uniprot,440 windowmaskerSdust,11 repeats.bed windowmaskerSdust,73 windowmaskerSdust,75 repetitive nestedRepeats,351 refSeqComposite,985 refSeqComposite,1013 rmsk,374 uniprot,1400 reporting refSeqComposite,1097 represent chainHg38,136 chainHg38,165 chainHg38,454 chainHg38,459 chainNetHg38,139 chainNetHg38,168 chainNetHg38,457 chainNetHg38,462 chainNetTarSyr2,139 chainNetTarSyr2,168 chainNetTarSyr2,457 chainNetTarSyr2,462 chainTarSyr2,136 chainTarSyr2,165 chainTarSyr2,454 chainTarSyr2,459 netHg38,136 netHg38,165 netHg38,454 netHg38,459 netTarSyr2,136 netTarSyr2,165 netTarSyr2,454 netTarSyr2,459 representative refSeqComposite,544 represented gap,71 rmsk,49 representing gap,114 reproducibility uniprot,1645 required refSeqComposite,914 refSeqComposite,928 requirements refSeqComposite,395 res chainHg38,1117 chainNetHg38,1120 chainNetTarSyr2,1120 chainTarSyr2,1117 ensGene,197 microsat,127 netHg38,1117 netTarSyr2,1117 refSeqComposite,1745 refSeqComposite,1786 refSeqComposite,1819 simpleRepeat,87 transMapEnsemblV5,750 transMapEstV5,719 transMapRefSeqV5,719 transMapRnaV5,719 transMapV5,825 uniprot,1999 xenoRefGene,313 xenoRefGene,354 xenoRefGene,387 research nestedRepeats,54 refSeqComposite,1108 rmsk,90 residues uniprot,344 resolve uniprot,1357 resolved uniprot,1284 resource uniprot,1995 uniprot,2033 rest cpgIslandExt,518 cpgIslandExtUnmasked,521 cpgIslandSuper,518 ensGene,108 refSeqComposite,1316 restricted refSeqComposite,585 result chainHg38,178 chainNetHg38,181 chainNetTarSyr2,181 chainTarSyr2,178 cpgIslandExt,112 cpgIslandExtUnmasked,115 cpgIslandSuper,112 netHg38,178 netTarSyr2,178 refSeqComposite,62 transMapEnsemblV5,510 transMapEstV5,479 transMapRefSeqV5,479 transMapRnaV5,479 transMapV5,585 uniprot,798 uniprot,1065 uniprot,1170 resulting chainHg38,609 chainNetHg38,612 chainNetTarSyr2,612 chainTarSyr2,609 netHg38,609 netTarSyr2,609 refSeqComposite,286 transMapEnsemblV5,81 transMapEnsemblV5,340 transMapEnsemblV5,352 transMapEnsemblV5,497 transMapEstV5,50 transMapEstV5,309 transMapEstV5,321 transMapEstV5,466 transMapRefSeqV5,50 transMapRefSeqV5,309 transMapRefSeqV5,321 transMapRefSeqV5,466 transMapRnaV5,50 transMapRnaV5,309 transMapRnaV5,321 transMapRnaV5,466 transMapV5,51 transMapV5,415 transMapV5,427 transMapV5,572 uniprot,874 uniprot,1137 uniprot,1308 results refSeqComposite,1106 uniprot,1463 uniprot,1649 retained uniprot,795 retroposons rmsk,173 review refSeqComposite,617 refSeqComposite,637 refSeqComposite,654 refSeqComposite,685 refSeqComposite,710 xenoRefGene,66 reviewed refSeqComposite,628 refSeqComposite,638 refSeqComposite,644 xenoRefGene,76 reviews refSeqComposite,260 rhirox1 ensGene,80 refSeqComposite,1559 refSeqComposite,1623 transMapEnsemblV5,207 transMapEnsemblV5,668 transMapEstV5,176 transMapEstV5,637 transMapRefSeqV5,176 transMapRefSeqV5,637 transMapRnaV5,176 transMapRnaV5,637 transMapV5,282 transMapV5,743 uniprot,1816 rhirox1.ensembl.transmapv4.bigpsl transMapEnsemblV5,596 transMapEstV5,565 transMapRefSeqV5,565 transMapRnaV5,565 rhirox1.ensembl.transmapv5.bigpsl transMapV5,671 rhirox1.est.transmapv4.bigpsl transMapEnsemblV5,605 transMapEstV5,574 transMapRefSeqV5,574 transMapRnaV5,574 rhirox1.est.transmapv5.bigpsl transMapV5,680 rhirox1.fa windowmaskerSdust,62 windowmaskerSdust,71 rhirox1.refseq.transmapv4.bigpsl transMapEnsemblV5,599 transMapEnsemblV5,671 transMapEstV5,568 transMapEstV5,640 transMapRefSeqV5,568 transMapRefSeqV5,640 transMapRnaV5,568 transMapRnaV5,640 rhirox1.refseq.transmapv5.bigpsl transMapV5,674 transMapV5,746 rhirox1.rna.transmapv4.bigpsl transMapEnsemblV5,602 transMapEstV5,571 transMapRefSeqV5,571 transMapRnaV5,571 rhirox1.rna.transmapv5.bigpsl transMapV5,677 riestra uniprot,1972 right refSeqComposite,979 rightmost refSeqComposite,1021 rna refSeqComposite,30 refSeqComposite,1093 refSeqComposite,1153 refSeqComposite,1214 refSeqComposite,1257 refSeqComposite,1665 rmsk,186 rmsk,189 transMapEnsemblV5,601 transMapEstV5,570 transMapRefSeqV5,570 transMapRnaV5,2 transMapRnaV5,5 transMapRnaV5,570 transMapV5,676 xenoRefGene,32 xenoRefGene,245 xenoRefGene,291 rna-seq refSeqComposite,76 refSeqComposite,367 rnas ncbiRefSeqPsl,6 refSeqComposite,55 refSeqComposite,440 refSeqComposite,493 refSeqComposite,1233 xenoRefGene,221 robert chainHg38,999 chainNetHg38,1002 chainNetTarSyr2,1002 chainTarSyr2,999 nestedRepeats,307 netHg38,999 netTarSyr2,999 rmsk,330 role uniprot,309 rolling rmsk,201 ross chainHg38,948 chainNetHg38,951 chainNetTarSyr2,951 chainTarSyr2,948 netHg38,948 netTarSyr2,948 row nestedRepeats,179 rpts nestedRepeats,2 rrna rmsk,191 run chainHg38,664 chainNetHg38,667 chainNetTarSyr2,667 chainTarSyr2,664 netHg38,664 netTarSyr2,664 refSeqComposite,1615 windowmaskerSdust,53 s augustusGene,104 augustusGene,221 augustusGene,319 chainHg38,1067 chainHg38,1084 chainHg38,1097 chainNetHg38,1070 chainNetHg38,1087 chainNetHg38,1100 chainNetTarSyr2,1070 chainNetTarSyr2,1087 chainNetTarSyr2,1100 chainTarSyr2,1067 chainTarSyr2,1084 chainTarSyr2,1097 cpgIslandExt,436 cpgIslandExt,440 cpgIslandExt,442 cpgIslandExt,443 cpgIslandExt,445 cpgIslandExt,447 cpgIslandExt,453 cpgIslandExt,455 cpgIslandExtUnmasked,439 cpgIslandExtUnmasked,443 cpgIslandExtUnmasked,445 cpgIslandExtUnmasked,446 cpgIslandExtUnmasked,448 cpgIslandExtUnmasked,450 cpgIslandExtUnmasked,456 cpgIslandExtUnmasked,458 cpgIslandSuper,436 cpgIslandSuper,440 cpgIslandSuper,442 cpgIslandSuper,443 cpgIslandSuper,445 cpgIslandSuper,447 cpgIslandSuper,453 cpgIslandSuper,455 genscan,190 genscan,194 genscan,210 nestedRepeats,286 netHg38,1067 netHg38,1084 netHg38,1097 netTarSyr2,1067 netTarSyr2,1084 netTarSyr2,1097 refSeqComposite,107 refSeqComposite,320 refSeqComposite,471 refSeqComposite,490 refSeqComposite,1127 refSeqComposite,1212 rmsk,18 rmsk,293 transMapEnsemblV5,735 transMapEstV5,704 transMapRefSeqV5,704 transMapRnaV5,704 transMapV5,810 uniprot,751 uniprot,774 saccharomyces augustusGene,223 safely refSeqComposite,1460 salzberg genscan,189 same chainHg38,533 chainHg38,548 chainNetHg38,536 chainNetHg38,551 chainNetTarSyr2,536 chainNetTarSyr2,551 chainTarSyr2,533 chainTarSyr2,548 nestedRepeats,143 netHg38,533 netHg38,548 netTarSyr2,533 netTarSyr2,548 refSeqComposite,1225 uniprot,608 uniprot,612 uniprot,641 uniprot,1173 sample augustusGene,133 sampling augustusGene,129 sanborn transMapEnsemblV5,792 transMapEstV5,761 transMapRefSeqV5,761 transMapRnaV5,761 transMapV5,867 santa chainHg38,972 chainHg38,1017 chainNetHg38,975 chainNetHg38,1020 chainNetTarSyr2,975 chainNetTarSyr2,1020 chainTarSyr2,972 chainTarSyr2,1017 netHg38,972 netHg38,1017 netTarSyr2,972 netTarSyr2,1017 satellite rmsk,184 save cpgIslandExt,582 cpgIslandExtUnmasked,585 cpgIslandSuper,582 scaffold gold,82 gold,120 scaffolds gap,131 sch windowmaskerSdust,94 scheib uniprot,2012 schwartz chainHg38,939 chainHg38,1096 chainNetHg38,942 chainNetHg38,1099 chainNetTarSyr2,942 chainNetTarSyr2,1099 chainTarSyr2,939 chainTarSyr2,1096 netHg38,939 netHg38,1096 netTarSyr2,939 netTarSyr2,1096 sci chainHg38,1082 chainNetHg38,1085 chainNetTarSyr2,1085 chainTarSyr2,1082 netHg38,1082 netTarSyr2,1082 science genscan,203 scientific refSeqComposite,283 uniprot,37 scientists refSeqComposite,1727 transMapEnsemblV5,703 transMapEstV5,672 transMapRefSeqV5,672 transMapRnaV5,672 transMapV5,778 xenoRefGene,296 score chainHg38,693 chainNetHg38,696 chainNetTarSyr2,696 chainTarSyr2,693 nestedRepeats,188 nestedRepeats,216 nestedRepeats,223 netHg38,693 netTarSyr2,693 uniprot,950 uniprot,1116 uniprot,1317 uniprot,1349 uniprot,1491 scores uniprot,1085 scoring chainHg38,79 chainHg38,89 chainHg38,672 chainHg38,689 chainHg38,1044 chainNetHg38,82 chainNetHg38,92 chainNetHg38,675 chainNetHg38,692 chainNetHg38,1047 chainNetTarSyr2,82 chainNetTarSyr2,92 chainNetTarSyr2,675 chainNetTarSyr2,692 chainNetTarSyr2,1047 chainTarSyr2,79 chainTarSyr2,89 chainTarSyr2,672 chainTarSyr2,689 chainTarSyr2,1044 cpgIslandExt,238 cpgIslandExt,251 cpgIslandExtUnmasked,241 cpgIslandExtUnmasked,254 cpgIslandSuper,238 cpgIslandSuper,251 netHg38,79 netHg38,89 netHg38,672 netHg38,689 netHg38,1044 netTarSyr2,79 netTarSyr2,89 netTarSyr2,672 netTarSyr2,689 netTarSyr2,1044 scott chainHg38,938 chainNetHg38,941 chainNetTarSyr2,941 chainTarSyr2,938 netHg38,938 netTarSyr2,938 screens nestedRepeats,32 rmsk,22 script uniprot,1549 scrna rmsk,193 sdust windowmaskerSdust,2 windowmaskerSdust,8 windowmaskerSdust,68 search transMapEnsemblV5,804 transMapEstV5,773 transMapRefSeqV5,773 transMapRnaV5,773 transMapV5,879 searching cpgIslandExt,230 cpgIslandExtUnmasked,233 cpgIslandSuper,230 searls genscan,191 secondary unipStruct,5 uniprot,361 secreted uniprot,247 section ensGene,53 genscan,153 nestedRepeats,67 refSeqComposite,93 refSeqComposite,1660 rmsk,103 uniprot,897 sections chainHg38,819 chainNetHg38,822 chainNetTarSyr2,822 chainTarSyr2,819 netHg38,819 netTarSyr2,819 see augustusGene,42 ensGene,25 ensGene,161 genscan,57 microsat,101 nestedRepeats,296 nestedRepeats,370 refSeqComposite,90 refSeqComposite,138 refSeqComposite,338 refSeqComposite,549 rmsk,319 rmsk,393 simpleRepeat,63 transMapEnsemblV5,233 transMapEnsemblV5,577 transMapEstV5,202 transMapEstV5,546 transMapRefSeqV5,202 transMapRefSeqV5,546 transMapRnaV5,202 transMapRnaV5,546 transMapV5,308 transMapV5,652 uniprot,188 uniprot,526 uniprot,768 uniprot,894 xenoRefGene,211 segment cpgIslandExt,254 cpgIslandExt,299 cpgIslandExtUnmasked,257 cpgIslandExtUnmasked,302 cpgIslandSuper,254 cpgIslandSuper,299 segments cpgIslandExt,252 cpgIslandExtUnmasked,255 cpgIslandSuper,252 select genscan,90 refSeqComposite,518 refSeqComposite,535 refSeqComposite,539 refSeqComposite,552 refSeqComposite,842 xenoRefGene,164 selected refSeqComposite,161 transMapEnsemblV5,216 transMapEnsemblV5,253 transMapEnsemblV5,264 transMapEnsemblV5,332 transMapEstV5,185 transMapEstV5,222 transMapEstV5,233 transMapEstV5,301 transMapRefSeqV5,185 transMapRefSeqV5,222 transMapRefSeqV5,233 transMapRefSeqV5,301 transMapRnaV5,185 transMapRnaV5,222 transMapRnaV5,233 transMapRnaV5,301 transMapV5,291 transMapV5,328 transMapV5,339 transMapV5,407 uniprot,986 selecting microsat,60 selective cpgIslandExt,122 cpgIslandExtUnmasked,125 cpgIslandSuper,122 semi-markov augustusGene,117 sensitivity transMapV5,149 sep chainHg38,1087 chainNetHg38,1090 chainNetTarSyr2,5 chainNetTarSyr2,69 chainNetTarSyr2,315 chainNetTarSyr2,1090 chainNetTarSyr2Viewchain,3 chainNetTarSyr2Viewnet,3 chainTarSyr2,4 chainTarSyr2,66 chainTarSyr2,312 chainTarSyr2,1087 nestedRepeats,356 netHg38,1087 netTarSyr2,4 netTarSyr2,66 netTarSyr2,312 netTarSyr2,1087 rmsk,379 seq unipConflict,1 sequence augustusGene,32 augustusGene,70 chainHg38,172 chainHg38,304 chainHg38,1047 chainNetHg38,175 chainNetHg38,307 chainNetHg38,1050 chainNetTarSyr2,175 chainNetTarSyr2,307 chainNetTarSyr2,1050 chainTarSyr2,172 chainTarSyr2,304 chainTarSyr2,1047 cpgIslandExt,232 cpgIslandExt,303 cpgIslandExt,325 cpgIslandExt,329 cpgIslandExt,397 cpgIslandExt,410 cpgIslandExtUnmasked,7 cpgIslandExtUnmasked,235 cpgIslandExtUnmasked,306 cpgIslandExtUnmasked,328 cpgIslandExtUnmasked,332 cpgIslandExtUnmasked,400 cpgIslandExtUnmasked,413 cpgIslandSuper,232 cpgIslandSuper,303 cpgIslandSuper,325 cpgIslandSuper,329 cpgIslandSuper,397 cpgIslandSuper,410 gap,56 gold,55 gold,159 netHg38,172 netHg38,304 netHg38,1047 netTarSyr2,172 netTarSyr2,304 netTarSyr2,1047 refSeqComposite,659 refSeqComposite,670 refSeqComposite,886 refSeqComposite,986 refSeqComposite,1014 refSeqComposite,1041 refSeqComposite,1053 refSeqComposite,1086 refSeqComposite,1090 refSeqComposite,1095 refSeqComposite,1292 refSeqComposite,1805 refSeqComposite,1810 rmsk,48 rmsk,62 transMapEnsemblV5,130 transMapEnsemblV5,693 transMapEnsemblV5,700 transMapEstV5,99 transMapEstV5,662 transMapEstV5,669 transMapRefSeqV5,99 transMapRefSeqV5,662 transMapRefSeqV5,669 transMapRnaV5,99 transMapRnaV5,662 transMapRnaV5,669 transMapV5,205 transMapV5,768 transMapV5,775 ucscToINSDC,7 ucscToINSDC,29 ucscToRefSeq,24 unipConflict,4 uniprot,356 uniprot,372 uniprot,381 uniprot,387 uniprot,636 uniprot,967 uniprot,971 uniprot,1134 uniprot,1219 uniprot,1242 uniprot,1379 uniprot,2035 windowmaskerSdust,17 xenoRefGene,280 xenoRefGene,292 xenoRefGene,373 xenoRefGene,378 sequence-to-gene refSeqComposite,688 sequenced windowmaskerSdust,104 sequences gold,13 microsat,26 microsat,124 nestedRepeats,34 nestedRepeats,42 refSeqComposite,32 refSeqComposite,113 refSeqComposite,271 refSeqComposite,287 refSeqComposite,891 refSeqComposite,1101 refSeqComposite,1666 refSeqComposite,1783 rmsk,24 rmsk,32 simpleRepeat,84 uniprot,16 uniprot,85 uniprot,112 uniprot,114 uniprot,131 uniprot,138 uniprot,166 uniprot,195 uniprot,197 uniprot,377 uniprot,673 uniprot,781 uniprot,1103 uniprot,1374 uniprot,1424 uniprot,1608 uniprot,1611 uniprot,1889 xenoRefGene,34 xenoRefGene,351 sequencing chainHg38,901 chainNetHg38,904 chainNetTarSyr2,904 chainTarSyr2,901 cytoBandIdeo,9 gap,6 gc5BaseBw,10 gold,7 netHg38,901 netTarSyr2,901 ucscToINSDC,12 ucscToRefSeq,7 server ensGene,144 refSeqComposite,1334 refSeqComposite,1340 refSeqComposite,1356 refSeqComposite,1495 refSeqComposite,1610 refSeqComposite,1637 refSeqComposite,1689 refSeqComposite,1715 transMapEnsemblV5,564 transMapEstV5,533 transMapRefSeqV5,533 transMapRnaV5,533 transMapV5,639 uniprot,1699 uniprot,1745 servers cpgIslandExt,539 cpgIslandExtUnmasked,542 cpgIslandSuper,539 ensGene,116 set refSeqComposite,162 refSeqComposite,1505 refSeqComposite,1642 refSeqComposite,1705 transMapEnsemblV5,283 transMapEstV5,252 transMapRefSeqV5,252 transMapRnaV5,252 transMapV5,358 uniprot,838 uniprot,858 uniprot,1287 uniprot,1597 sets augustusGene,158 refSeqComposite,156 setting refSeqComposite,1045 refSeqComposite,1072 settings cpgIslandExt,213 cpgIslandExtUnmasked,216 cpgIslandSuper,213 refSeqComposite,750 several transMapEnsemblV5,139 transMapEstV5,108 transMapRefSeqV5,108 transMapRnaV5,108 transMapV5,214 shade nestedRepeats,194 shaded nestedRepeats,182 shades nestedRepeats,202 shading nestedRepeats,240 refSeqComposite,612 rmsk,208 rmsk,239 xenoRefGene,61 shift refSeqComposite,966 shifted refSeqComposite,975 refSeqComposite,1022 short refSeqComposite,933 rmsk,153 uniprot,460 uniprot,978 shortgap refSeqComposite,969 shotgun gold,153 show refSeqComposite,158 refSeqComposite,795 refSeqComposite,910 refSeqComposite,924 uniprot,80 uniprot,227 uniprot,538 xenoRefGene,127 showing refSeqComposite,964 shown chainHg38,41 chainHg38,54 chainNetHg38,44 chainNetHg38,57 chainNetTarSyr2,44 chainNetTarSyr2,57 chainTarSyr2,41 chainTarSyr2,54 gold,103 microsat,48 netHg38,41 netHg38,54 netTarSyr2,41 netTarSyr2,54 uniprot,504 uniprot,628 uniprot,646 uniprot,1580 uniprot,1631 shows augustusGene,15 augustusGene,108 chainHg38,15 chainHg38,62 chainHg38,271 chainNetHg38,18 chainNetHg38,65 chainNetHg38,274 chainNetTarSyr2,18 chainNetTarSyr2,65 chainNetTarSyr2,274 chainTarSyr2,15 chainTarSyr2,62 chainTarSyr2,271 gap,10 gc5BaseBw,16 genscan,13 gold,11 nestedRepeats,17 nestedRepeats,81 netHg38,15 netHg38,62 netHg38,271 netTarSyr2,15 netTarSyr2,62 netTarSyr2,271 refSeqComposite,18 refSeqComposite,1008 refSeqComposite,1019 uniprot,14 uniprot,484 xenoRefGene,15 side gap,89 siepel transMapEnsemblV5,717 transMapEstV5,686 transMapRefSeqV5,686 transMapRnaV5,686 transMapV5,792 signal augustusGene,48 augustusGene,63 unipLocSignal,1 unipLocSignal,4 uniprot,238 uniprot,476 uniprot,511 uniprot,564 signals genscan,34 genscan,187 significantly cpgIslandExt,156 cpgIslandExtUnmasked,159 cpgIslandSuper,156 signifies rmsk,258 similar nestedRepeats,199 uniprot,1403 simple microsat,57 microsat,85 rmsk,178 simpleRepeat,1 simpleRepeat,3 simpleRepeat,15 simultaneously chainHg38,103 chainNetHg38,106 chainNetTarSyr2,106 chainTarSyr2,103 netHg38,103 netTarSyr2,103 since chainHg38,582 chainNetHg38,585 chainNetTarSyr2,585 chainTarSyr2,582 netHg38,582 netTarSyr2,582 uniprot,1383 sine rmsk,157 single chainHg38,130 chainHg38,139 chainHg38,633 chainHg38,638 chainNetHg38,133 chainNetHg38,142 chainNetHg38,636 chainNetHg38,641 chainNetTarSyr2,133 chainNetTarSyr2,142 chainNetTarSyr2,636 chainNetTarSyr2,641 chainTarSyr2,130 chainTarSyr2,139 chainTarSyr2,633 chainTarSyr2,638 nestedRepeats,178 netHg38,130 netHg38,139 netHg38,633 netHg38,638 netTarSyr2,130 netTarSyr2,139 netTarSyr2,633 netTarSyr2,638 refSeqComposite,538 refSeqComposite,1256 transMapEnsemblV5,483 transMapEstV5,452 transMapRefSeqV5,452 transMapRnaV5,452 transMapV5,558 uniprot,141 xenoRefGene,244 single-lined chainHg38,214 chainNetHg38,217 chainNetTarSyr2,217 chainTarSyr2,214 netHg38,214 netTarSyr2,214 site genscan,157 windowmaskerSdust,45 sites augustusGene,54 augustusGene,59 cpgIslandExt,34 cpgIslandExtUnmasked,37 cpgIslandSuper,34 refSeqComposite,273 uniprot,342 uniprot,354 uniprot,578 uniprot,585 size gap,135 skip refSeqComposite,1038 skipped refSeqComposite,1051 sm refSeqComposite,1760 xenoRefGene,328 small refSeqComposite,941 smallsize chainHg38,719 chainNetHg38,722 chainNetTarSyr2,722 chainTarSyr2,719 netHg38,719 netTarSyr2,719 smit chainHg38,956 chainHg38,1100 chainNetHg38,959 chainNetHg38,1103 chainNetTarSyr2,959 chainNetTarSyr2,1103 chainTarSyr2,956 chainTarSyr2,1100 nestedRepeats,306 nestedRepeats,324 nestedRepeats,371 nestedRepeats,395 netHg38,956 netHg38,1100 netTarSyr2,956 netTarSyr2,1100 rmsk,17 rmsk,329 rmsk,347 rmsk,394 rmsk,418 snrna rmsk,192 snub-nosed chainHg38,73 chainHg38,101 chainHg38,160 chainHg38,208 chainHg38,276 chainHg38,285 chainHg38,586 chainHg38,640 chainNetHg38,76 chainNetHg38,104 chainNetHg38,163 chainNetHg38,211 chainNetHg38,279 chainNetHg38,288 chainNetHg38,589 chainNetHg38,643 chainNetTarSyr2,76 chainNetTarSyr2,104 chainNetTarSyr2,163 chainNetTarSyr2,211 chainNetTarSyr2,279 chainNetTarSyr2,288 chainNetTarSyr2,589 chainNetTarSyr2,643 chainTarSyr2,73 chainTarSyr2,101 chainTarSyr2,160 chainTarSyr2,208 chainTarSyr2,276 chainTarSyr2,285 chainTarSyr2,586 chainTarSyr2,640 gap,18 gold,20 netHg38,73 netHg38,101 netHg38,160 netHg38,208 netHg38,276 netHg38,285 netHg38,586 netHg38,640 netTarSyr2,73 netTarSyr2,101 netTarSyr2,160 netTarSyr2,208 netTarSyr2,276 netTarSyr2,285 netTarSyr2,586 netTarSyr2,640 refSeqComposite,20 refSeqComposite,444 refSeqComposite,467 refSeqComposite,502 refSeqComposite,1239 transMapEnsemblV5,91 transMapEnsemblV5,205 transMapEnsemblV5,337 transMapEstV5,60 transMapEstV5,174 transMapEstV5,306 transMapRefSeqV5,60 transMapRefSeqV5,174 transMapRefSeqV5,306 transMapRnaV5,60 transMapRnaV5,174 transMapRnaV5,306 transMapV5,61 transMapV5,280 transMapV5,412 xenoRefGene,4 xenoRefGene,26 xenoRefGene,227 so chainHg38,446 chainNetHg38,449 chainNetTarSyr2,449 chainTarSyr2,446 netHg38,446 netTarSyr2,446 refSeqComposite,303 refSeqComposite,1621 uniprot,1135 uniprot,1430 society refSeqComposite,1083 soft-masked rmsk,305 software nestedRepeats,255 refSeqComposite,378 some cpgIslandExt,134 cpgIslandExtUnmasked,137 cpgIslandSuper,134 nestedRepeats,207 refSeqComposite,664 refSeqComposite,712 rmsk,105 rmsk,268 transMapEnsemblV5,301 transMapEnsemblV5,311 transMapEstV5,270 transMapEstV5,280 transMapRefSeqV5,270 transMapRefSeqV5,280 transMapRnaV5,270 transMapRnaV5,280 transMapV5,376 transMapV5,386 uniprot,318 sometimes simpleRepeat,50 uniprot,983 sort cpgIslandExt,483 cpgIslandExtUnmasked,486 cpgIslandSuper,483 sorted chainHg38,788 chainNetHg38,791 chainNetTarSyr2,791 chainTarSyr2,788 netHg38,788 netTarSyr2,788 uniprot,556 source cpgIslandExt,555 cpgIslandExtUnmasked,558 cpgIslandSuper,555 refSeqComposite,1522 transMapEnsemblV5,154 transMapEnsemblV5,327 transMapEnsemblV5,346 transMapEnsemblV5,410 transMapEnsemblV5,435 transMapEnsemblV5,626 transMapEnsemblV5,640 transMapEstV5,123 transMapEstV5,296 transMapEstV5,315 transMapEstV5,379 transMapEstV5,404 transMapEstV5,595 transMapEstV5,609 transMapRefSeqV5,123 transMapRefSeqV5,296 transMapRefSeqV5,315 transMapRefSeqV5,379 transMapRefSeqV5,404 transMapRefSeqV5,595 transMapRefSeqV5,609 transMapRnaV5,123 transMapRnaV5,296 transMapRnaV5,315 transMapRnaV5,379 transMapRnaV5,404 transMapRnaV5,595 transMapRnaV5,609 transMapV5,229 transMapV5,402 transMapV5,421 transMapV5,485 transMapV5,510 transMapV5,701 transMapV5,715 uniprot,820 uniprot,1545 uniprot,1774 uniprot,1788 windowmaskerSdust,33 sources transMapEnsemblV5,48 transMapEnsemblV5,66 space uniprot,1990 spaces gold,101 span chainHg38,405 chainNetHg38,408 chainNetTarSyr2,408 chainTarSyr2,405 netHg38,405 netTarSyr2,405 refSeqComposite,1010 specialized simpleRepeat,29 species augustusGene,166 augustusGene,173 augustusGene,181 augustusGene,186 augustusGene,200 augustusGene,229 augustusGene,244 chainHg38,120 chainHg38,175 chainHg38,194 chainHg38,907 chainNetHg38,123 chainNetHg38,178 chainNetHg38,197 chainNetHg38,910 chainNetTarSyr2,123 chainNetTarSyr2,178 chainNetTarSyr2,197 chainNetTarSyr2,910 chainTarSyr2,120 chainTarSyr2,175 chainTarSyr2,194 chainTarSyr2,907 netHg38,120 netHg38,175 netHg38,194 netHg38,907 netTarSyr2,120 netTarSyr2,175 netTarSyr2,194 netTarSyr2,907 transMapEnsemblV5,32 transMapEnsemblV5,273 transMapEstV5,30 transMapEstV5,242 transMapRefSeqV5,30 transMapRefSeqV5,242 transMapRnaV5,30 transMapRnaV5,242 transMapV5,29 transMapV5,80 transMapV5,116 transMapV5,348 species-specific augustusGene,156 specific gap,35 gold,37 simpleRepeat,53 specification gap,61 gold,60 specify refSeqComposite,1118 speed refSeqComposite,1448 splice augustusGene,53 genscan,156 refSeqComposite,272 uniprot,144 spliced transMapEnsemblV5,177 transMapEstV5,17 transMapEstV5,146 transMapRefSeqV5,146 transMapRnaV5,146 transMapV5,252 splicing augustusGene,123 genscan,33 genscan,186 split chainHg38,588 chainNetHg38,591 chainNetTarSyr2,591 chainTarSyr2,588 netHg38,588 netTarSyr2,588 spontaneous cpgIslandExt,109 cpgIslandExtUnmasked,112 cpgIslandSuper,109 squish nestedRepeats,159 src cpgIslandExt,564 cpgIslandExtUnmasked,567 cpgIslandSuper,564 srcuniq transMapEnsemblV5,427 transMapEstV5,396 transMapRefSeqV5,396 transMapRnaV5,396 transMapV5,502 srprna rmsk,194 staff refSeqComposite,647 refSeqComposite,698 uniprot,42 uniprot,1965 stage uniprot,1228 stages cpgIslandExt,90 cpgIslandExtUnmasked,93 cpgIslandSuper,90 stanke augustusGene,103 augustusGene,251 augustusGene,284 augustusGene,286 augustusGene,316 transMapEnsemblV5,760 transMapEstV5,729 transMapRefSeqV5,729 transMapRnaV5,729 transMapV5,835 start augustusGene,58 cpgIslandExt,33 cpgIslandExtUnmasked,36 cpgIslandSuper,33 refSeqComposite,1564 transMapEnsemblV5,674 transMapEstV5,643 transMapRefSeqV5,643 transMapRnaV5,643 transMapV5,749 uniprot,125 uniprot,209 uniprot,1821 state chainHg38,933 chainHg38,1036 chainNetHg38,936 chainNetHg38,1039 chainNetTarSyr2,936 chainNetTarSyr2,1039 chainTarSyr2,933 chainTarSyr2,1036 netHg38,933 netHg38,1036 netTarSyr2,933 netTarSyr2,1036 statistical augustusGene,47 stdin cpgIslandExt,415 cpgIslandExt,420 cpgIslandExtUnmasked,418 cpgIslandExtUnmasked,423 cpgIslandSuper,415 cpgIslandSuper,420 stdout cpgIslandExt,413 cpgIslandExt,417 cpgIslandExtUnmasked,416 cpgIslandExtUnmasked,420 cpgIslandSuper,413 cpgIslandSuper,417 refSeqComposite,1568 transMapEnsemblV5,678 transMapEstV5,647 transMapRefSeqV5,647 transMapRnaV5,647 transMapV5,753 uniprot,1825 stefanie augustusGene,267 step transMapEnsemblV5,309 transMapEstV5,278 transMapRefSeqV5,278 transMapRnaV5,278 transMapV5,384 uniprot,901 uniprot,1155 uniprot,1330 stevens transMapEnsemblV5,726 transMapEstV5,695 transMapRefSeqV5,695 transMapRnaV5,695 transMapV5,801 storage chainHg38,990 chainNetHg38,993 chainNetTarSyr2,993 chainTarSyr2,990 netHg38,990 netTarSyr2,990 stored refSeqComposite,1484 transMapEnsemblV5,547 transMapEstV5,516 transMapRefSeqV5,516 transMapRnaV5,516 transMapV5,622 uniprot,1733 strand chainHg38,254 chainNetHg38,257 chainNetTarSyr2,257 chainTarSyr2,254 cpgIslandExt,80 cpgIslandExt,84 cpgIslandExtUnmasked,83 cpgIslandExtUnmasked,87 cpgIslandSuper,80 cpgIslandSuper,84 nestedRepeats,144 nestedRepeats,155 netHg38,254 netTarSyr2,254 strands uniprot,365 strategy uniprot,1120 uniprot,1193 stringency transMapV5,121 structure augustusGene,113 unipStruct,1 unipStruct,6 uniprot,362 uniprot,2037 structures augustusGene,164 genscan,215 studying chainHg38,299 chainNetHg38,302 chainNetTarSyr2,302 chainTarSyr2,299 netHg38,299 netTarSyr2,299 subcellular uniprot,553 subject refSeqComposite,682 refSeqComposite,707 submit refSeqComposite,119 submitted transMapEnsemblV5,695 transMapEstV5,664 transMapRefSeqV5,664 transMapRnaV5,664 transMapV5,770 submodel augustusGene,331 subsections chainHg38,654 chainNetHg38,657 chainNetTarSyr2,657 chainTarSyr2,654 netHg38,654 netTarSyr2,654 subsequent transMapEnsemblV5,445 transMapEstV5,414 transMapRefSeqV5,414 transMapRnaV5,414 transMapV5,520 subset microsat,54 ncbiRefSeqPredicted,7 refSeqComposite,213 refSeqComposite,343 refSeqComposite,519 refSeqComposite,524 refSeqComposite,555 refSeqComposite,557 refSeqComposite,587 refSeqComposite,799 transMapEnsemblV5,210 transMapEstV5,179 transMapRefSeqV5,179 transMapRnaV5,179 transMapV5,285 substantial chainHg38,171 chainNetHg38,174 chainNetTarSyr2,174 chainTarSyr2,171 netHg38,171 netTarSyr2,171 subtrack refSeqComposite,754 refSeqComposite,766 uniprot,411 subtracks chainHg38,29 chainHg38,36 chainNetHg38,32 chainNetHg38,39 chainNetTarSyr2,32 chainNetTarSyr2,39 chainTarSyr2,29 chainTarSyr2,36 netHg38,29 netHg38,36 netTarSyr2,29 netTarSyr2,36 refSeqComposite,36 refSeqComposite,164 refSeqComposite,188 refSeqComposite,1404 uniprot,59 uniprot,72 uniprot,520 uniprot,548 subtracts refSeqComposite,180 such chainHg38,868 chainNetHg38,871 chainNetTarSyr2,871 chainTarSyr2,868 cpgIslandExt,65 cpgIslandExtUnmasked,68 cpgIslandSuper,65 netHg38,868 netTarSyr2,868 refSeqComposite,414 uniprot,306 suffix transMapEnsemblV5,404 transMapEstV5,373 transMapRefSeqV5,373 transMapRnaV5,373 transMapV5,479 uniprot,1255 suggestions refSeqComposite,118 suitable uniprot,1868 suppl augustusGene,336 supported gap,94 sure refSeqComposite,1104 uniprot,1407 swiss-prot uniprot,2025 swissprot unipAliSwissprot,1 unipAliSwissprot,6 uniprot,3 uniprot,24 uniprot,31 uniprot,76 uniprot,109 uniprot,116 uniprot,127 uniprot,414 uniprot,454 uniprot,495 uniprot,623 uniprot,703 uniprot,1373 symp chainHg38,1050 chainNetHg38,1053 chainNetTarSyr2,1053 chainTarSyr2,1050 netHg38,1050 netTarSyr2,1050 syn chainHg38,529 chainNetHg38,532 chainNetTarSyr2,532 chainTarSyr2,529 netHg38,529 netTarSyr2,529 transMapEnsemblV5,257 transMapEstV5,226 transMapRefSeqV5,226 transMapRnaV5,226 transMapV5,332 syntenic chainHg38,293 chainHg38,875 chainNetHg38,296 chainNetHg38,878 chainNetTarSyr2,296 chainNetTarSyr2,878 chainTarSyr2,293 chainTarSyr2,875 netHg38,293 netHg38,875 netTarSyr2,293 netTarSyr2,875 transMapEnsemblV5,239 transMapEnsemblV5,520 transMapEstV5,208 transMapEstV5,489 transMapRefSeqV5,208 transMapRefSeqV5,489 transMapRnaV5,208 transMapRnaV5,489 transMapV5,314 transMapV5,595 syntenically augustusGene,297 transMapEnsemblV5,76 transMapEnsemblV5,771 transMapEstV5,45 transMapEstV5,740 transMapRefSeqV5,45 transMapRefSeqV5,740 transMapRnaV5,45 transMapRnaV5,740 transMapV5,44 transMapV5,846 synteny chainHg38,32 chainNetHg38,35 chainNetTarSyr2,35 chainTarSyr2,32 netHg38,32 netTarSyr2,32 transMapEnsemblV5,278 transMapEstV5,247 transMapRefSeqV5,247 transMapRnaV5,247 transMapV5,353 synteny-filtered transMapV5,84 synthesized cpgIslandExt,78 cpgIslandExtUnmasked,81 cpgIslandSuper,78 system chainHg38,80 chainNetHg38,83 chainNetTarSyr2,83 chainTarSyr2,80 netHg38,80 netTarSyr2,80 refSeqComposite,1473 refSeqComposite,1532 transMapEnsemblV5,636 transMapEstV5,605 transMapRefSeqV5,605 transMapRnaV5,605 transMapV5,711 uniprot,1353 uniprot,1784 systems chainHg38,90 chainNetHg38,93 chainNetTarSyr2,93 chainTarSyr2,90 netHg38,90 netTarSyr2,90 t cpgIslandExt,437 cpgIslandExt,439 cpgIslandExt,441 cpgIslandExt,444 cpgIslandExt,446 cpgIslandExt,448 cpgIslandExt,450 cpgIslandExt,452 cpgIslandExt,454 cpgIslandExtUnmasked,440 cpgIslandExtUnmasked,442 cpgIslandExtUnmasked,444 cpgIslandExtUnmasked,447 cpgIslandExtUnmasked,449 cpgIslandExtUnmasked,451 cpgIslandExtUnmasked,453 cpgIslandExtUnmasked,455 cpgIslandExtUnmasked,457 cpgIslandSuper,437 cpgIslandSuper,439 cpgIslandSuper,441 cpgIslandSuper,444 cpgIslandSuper,446 cpgIslandSuper,448 cpgIslandSuper,450 cpgIslandSuper,452 cpgIslandSuper,454 ensGene,169 ensGene,181 ensGene,187 refSeqComposite,1800 xenoRefGene,368 t-118-29-172100 chainNetTarSyr2,690 chainTarSyr2,687 netTarSyr2,687 t-123-31-11491 chainHg38,687 chainNetHg38,690 netHg38,687 table augustusGene,225 cpgIslandExt,521 cpgIslandExtUnmasked,524 cpgIslandSuper,521 ensGene,66 refSeqComposite,1184 refSeqComposite,1318 refSeqComposite,1363 refSeqComposite,1580 transMapEnsemblV5,535 transMapEstV5,504 transMapRefSeqV5,504 transMapRnaV5,504 transMapV5,610 uniprot,1720 windowmaskerSdust,85 tables cpgIslandExt,511 cpgIslandExt,529 cpgIslandExtUnmasked,514 cpgIslandExtUnmasked,532 cpgIslandSuper,511 cpgIslandSuper,529 refSeqComposite,83 refSeqComposite,1324 refSeqComposite,1409 refSeqComposite,1438 uniprot,1301 tablesize chainHg38,717 chainNetHg38,720 chainNetTarSyr2,720 chainTarSyr2,717 netHg38,717 netTarSyr2,717 taken refSeqComposite,26 xenoRefGene,28 tandem microsat,92 microsat,105 microsat,116 simpleRepeat,4 simpleRepeat,16 simpleRepeat,23 simpleRepeat,76 transMapEnsemblV5,512 transMapEstV5,481 transMapRefSeqV5,481 transMapRnaV5,481 transMapV5,587 targeted transMapEnsemblV5,740 transMapEstV5,709 transMapRefSeqV5,709 transMapRnaV5,709 transMapV5,815 targeting refSeqComposite,588 tarsier chainNetTarSyr2,1 chainNetTarSyr2,4 chainNetTarSyr2,68 chainNetTarSyr2,101 chainNetTarSyr2,155 chainNetTarSyr2,277 chainNetTarSyr2,306 chainNetTarSyr2,587 chainNetTarSyr2,637 chainNetTarSyr2Viewchain,2 chainNetTarSyr2Viewnet,2 chainTarSyr2,1 chainTarSyr2,3 chainTarSyr2,65 chainTarSyr2,98 chainTarSyr2,152 chainTarSyr2,274 chainTarSyr2,303 chainTarSyr2,584 chainTarSyr2,634 netTarSyr2,1 netTarSyr2,3 netTarSyr2,65 netTarSyr2,98 netTarSyr2,152 netTarSyr2,274 netTarSyr2,303 netTarSyr2,584 netTarSyr2,634 tarsius_syrichta-2.0.1 chainNetTarSyr2,7 chainNetTarSyr2,71 chainNetTarSyr2,317 chainNetTarSyr2Viewchain,5 chainNetTarSyr2Viewnet,5 chainTarSyr2,6 chainTarSyr2,68 chainTarSyr2,314 netTarSyr2,6 netTarSyr2,68 netTarSyr2,314 tarsyr2 chainNetTarSyr2,8 chainNetTarSyr2,72 chainNetTarSyr2,318 chainNetTarSyr2Viewchain,6 chainNetTarSyr2Viewnet,6 chainTarSyr2,7 chainTarSyr2,69 chainTarSyr2,315 netTarSyr2,7 netTarSyr2,69 netTarSyr2,315 tatusova refSeqComposite,1799 xenoRefGene,367 tblastn uniprot,1476 temperature augustusGene,141 ten rmsk,148 tend cpgIslandExt,68 cpgIslandExt,102 cpgIslandExtUnmasked,71 cpgIslandExtUnmasked,105 cpgIslandSuper,68 cpgIslandSuper,102 microsat,37 terminal rmsk,167 terminology refSeqComposite,1079 text uniprot,1763 tgap chainHg38,745 chainNetHg38,748 chainNetTarSyr2,748 chainTarSyr2,745 netHg38,745 netTarSyr2,745 th transMapEnsemblV5,799 transMapEstV5,768 transMapRefSeqV5,768 transMapRnaV5,768 transMapV5,874 than chainHg38,85 chainHg38,518 chainNetHg38,88 chainNetHg38,521 chainNetTarSyr2,88 chainNetTarSyr2,521 chainTarSyr2,85 chainTarSyr2,518 cpgIslandExt,159 cpgIslandExt,270 cpgIslandExt,275 cpgIslandExtUnmasked,162 cpgIslandExtUnmasked,273 cpgIslandExtUnmasked,278 cpgIslandSuper,159 cpgIslandSuper,270 cpgIslandSuper,275 nestedRepeats,213 nestedRepeats,271 netHg38,85 netHg38,518 netTarSyr2,85 netTarSyr2,518 refSeqComposite,1250 transMapEnsemblV5,227 transMapEnsemblV5,379 transMapEstV5,196 transMapEstV5,348 transMapRefSeqV5,196 transMapRefSeqV5,348 transMapRnaV5,196 transMapRnaV5,348 transMapV5,109 transMapV5,150 transMapV5,302 transMapV5,454 xenoRefGene,24 xenoRefGene,238 thank ensGene,150 thanks augustusGene,248 genscan,170 nestedRepeats,303 rmsk,326 uniprot,1974 that chainHg38,20 chainHg38,45 chainHg38,81 chainHg38,143 chainHg38,169 chainHg38,377 chainHg38,404 chainHg38,426 chainHg38,578 chainHg38,838 chainHg38,849 chainNetHg38,23 chainNetHg38,48 chainNetHg38,84 chainNetHg38,146 chainNetHg38,172 chainNetHg38,380 chainNetHg38,407 chainNetHg38,429 chainNetHg38,581 chainNetHg38,841 chainNetHg38,852 chainNetTarSyr2,23 chainNetTarSyr2,48 chainNetTarSyr2,84 chainNetTarSyr2,146 chainNetTarSyr2,172 chainNetTarSyr2,380 chainNetTarSyr2,407 chainNetTarSyr2,429 chainNetTarSyr2,581 chainNetTarSyr2,841 chainNetTarSyr2,852 chainTarSyr2,20 chainTarSyr2,45 chainTarSyr2,81 chainTarSyr2,143 chainTarSyr2,169 chainTarSyr2,377 chainTarSyr2,404 chainTarSyr2,426 chainTarSyr2,578 chainTarSyr2,838 chainTarSyr2,849 cpgIslandExt,114 cpgIslandExt,178 cpgIslandExtUnmasked,117 cpgIslandExtUnmasked,181 cpgIslandSuper,114 cpgIslandSuper,178 genscan,141 gold,76 gold,146 microsat,15 nestedRepeats,265 nestedRepeats,273 netHg38,20 netHg38,45 netHg38,81 netHg38,143 netHg38,169 netHg38,377 netHg38,404 netHg38,426 netHg38,578 netHg38,838 netHg38,849 netTarSyr2,20 netTarSyr2,45 netTarSyr2,81 netTarSyr2,143 netTarSyr2,169 netTarSyr2,377 netTarSyr2,404 netTarSyr2,426 netTarSyr2,578 netTarSyr2,838 netTarSyr2,849 refSeqComposite,152 refSeqComposite,172 refSeqComposite,217 refSeqComposite,347 refSeqComposite,390 refSeqComposite,828 refSeqComposite,938 refSeqComposite,1029 refSeqComposite,1037 refSeqComposite,1062 refSeqComposite,1105 refSeqComposite,1627 rmsk,42 rmsk,259 transMapEnsemblV5,119 transMapEnsemblV5,195 transMapEnsemblV5,503 transMapEstV5,88 transMapEstV5,164 transMapEstV5,472 transMapRefSeqV5,88 transMapRefSeqV5,164 transMapRefSeqV5,472 transMapRnaV5,88 transMapRnaV5,164 transMapRnaV5,472 transMapV5,194 transMapV5,270 transMapV5,578 uniprot,167 uniprot,301 uniprot,696 uniprot,734 uniprot,745 uniprot,999 uniprot,1012 uniprot,1169 uniprot,1408 uniprot,1602 uniprot,1624 uniprot,1738 uniprot,1866 xenoRefGene,150 the augustusGene,20 augustusGene,25 augustusGene,30 augustusGene,38 augustusGene,61 augustusGene,69 augustusGene,81 augustusGene,109 augustusGene,143 augustusGene,165 augustusGene,172 augustusGene,177 augustusGene,185 augustusGene,240 augustusGene,250 augustusGene,255 augustusGene,258 augustusGene,261 augustusGene,272 augustusGene,275 chainHg38,18 chainHg38,37 chainHg38,59 chainHg38,71 chainHg38,121 chainHg38,134 chainHg38,151 chainHg38,158 chainHg38,206 chainHg38,211 chainHg38,237 chainHg38,247 chainHg38,252 chainHg38,260 chainHg38,268 chainHg38,272 chainHg38,283 chainHg38,302 chainHg38,311 chainHg38,325 chainHg38,340 chainHg38,346 chainHg38,349 chainHg38,364 chainHg38,370 chainHg38,374 chainHg38,394 chainHg38,400 chainHg38,414 chainHg38,432 chainHg38,449 chainHg38,452 chainHg38,457 chainHg38,470 chainHg38,483 chainHg38,485 chainHg38,492 chainHg38,495 chainHg38,502 chainHg38,508 chainHg38,521 chainHg38,532 chainHg38,536 chainHg38,539 chainHg38,547 chainHg38,551 chainHg38,557 chainHg38,568 chainHg38,571 chainHg38,583 chainHg38,592 chainHg38,594 chainHg38,602 chainHg38,608 chainHg38,617 chainHg38,620 chainHg38,652 chainHg38,657 chainHg38,666 chainHg38,670 chainHg38,677 chainHg38,700 chainHg38,708 chainHg38,778 chainHg38,782 chainHg38,790 chainHg38,794 chainHg38,798 chainHg38,806 chainHg38,851 chainHg38,861 chainHg38,880 chainHg38,883 chainHg38,895 chainHg38,919 chainHg38,961 chainHg38,967 chainHg38,985 chainHg38,992 chainHg38,1004 chainHg38,1013 chainHg38,1034 chainHg38,1074 chainNetHg38,21 chainNetHg38,40 chainNetHg38,62 chainNetHg38,74 chainNetHg38,124 chainNetHg38,137 chainNetHg38,154 chainNetHg38,161 chainNetHg38,209 chainNetHg38,214 chainNetHg38,240 chainNetHg38,250 chainNetHg38,255 chainNetHg38,263 chainNetHg38,271 chainNetHg38,275 chainNetHg38,286 chainNetHg38,305 chainNetHg38,314 chainNetHg38,328 chainNetHg38,343 chainNetHg38,349 chainNetHg38,352 chainNetHg38,367 chainNetHg38,373 chainNetHg38,377 chainNetHg38,397 chainNetHg38,403 chainNetHg38,417 chainNetHg38,435 chainNetHg38,452 chainNetHg38,455 chainNetHg38,460 chainNetHg38,473 chainNetHg38,486 chainNetHg38,488 chainNetHg38,495 chainNetHg38,498 chainNetHg38,505 chainNetHg38,511 chainNetHg38,524 chainNetHg38,535 chainNetHg38,539 chainNetHg38,542 chainNetHg38,550 chainNetHg38,554 chainNetHg38,560 chainNetHg38,571 chainNetHg38,574 chainNetHg38,586 chainNetHg38,595 chainNetHg38,597 chainNetHg38,605 chainNetHg38,611 chainNetHg38,620 chainNetHg38,623 chainNetHg38,655 chainNetHg38,660 chainNetHg38,669 chainNetHg38,673 chainNetHg38,680 chainNetHg38,703 chainNetHg38,711 chainNetHg38,781 chainNetHg38,785 chainNetHg38,793 chainNetHg38,797 chainNetHg38,801 chainNetHg38,809 chainNetHg38,854 chainNetHg38,864 chainNetHg38,883 chainNetHg38,886 chainNetHg38,898 chainNetHg38,922 chainNetHg38,964 chainNetHg38,970 chainNetHg38,988 chainNetHg38,995 chainNetHg38,1007 chainNetHg38,1016 chainNetHg38,1037 chainNetHg38,1077 chainNetTarSyr2,21 chainNetTarSyr2,40 chainNetTarSyr2,62 chainNetTarSyr2,74 chainNetTarSyr2,124 chainNetTarSyr2,137 chainNetTarSyr2,154 chainNetTarSyr2,161 chainNetTarSyr2,209 chainNetTarSyr2,214 chainNetTarSyr2,240 chainNetTarSyr2,250 chainNetTarSyr2,255 chainNetTarSyr2,263 chainNetTarSyr2,271 chainNetTarSyr2,275 chainNetTarSyr2,286 chainNetTarSyr2,305 chainNetTarSyr2,314 chainNetTarSyr2,328 chainNetTarSyr2,343 chainNetTarSyr2,349 chainNetTarSyr2,352 chainNetTarSyr2,367 chainNetTarSyr2,373 chainNetTarSyr2,377 chainNetTarSyr2,397 chainNetTarSyr2,403 chainNetTarSyr2,417 chainNetTarSyr2,435 chainNetTarSyr2,452 chainNetTarSyr2,455 chainNetTarSyr2,460 chainNetTarSyr2,473 chainNetTarSyr2,486 chainNetTarSyr2,488 chainNetTarSyr2,495 chainNetTarSyr2,498 chainNetTarSyr2,505 chainNetTarSyr2,511 chainNetTarSyr2,524 chainNetTarSyr2,535 chainNetTarSyr2,539 chainNetTarSyr2,542 chainNetTarSyr2,550 chainNetTarSyr2,554 chainNetTarSyr2,560 chainNetTarSyr2,571 chainNetTarSyr2,574 chainNetTarSyr2,586 chainNetTarSyr2,595 chainNetTarSyr2,597 chainNetTarSyr2,605 chainNetTarSyr2,611 chainNetTarSyr2,620 chainNetTarSyr2,623 chainNetTarSyr2,655 chainNetTarSyr2,660 chainNetTarSyr2,669 chainNetTarSyr2,673 chainNetTarSyr2,680 chainNetTarSyr2,703 chainNetTarSyr2,711 chainNetTarSyr2,781 chainNetTarSyr2,785 chainNetTarSyr2,793 chainNetTarSyr2,797 chainNetTarSyr2,801 chainNetTarSyr2,809 chainNetTarSyr2,854 chainNetTarSyr2,864 chainNetTarSyr2,883 chainNetTarSyr2,886 chainNetTarSyr2,898 chainNetTarSyr2,922 chainNetTarSyr2,964 chainNetTarSyr2,970 chainNetTarSyr2,988 chainNetTarSyr2,995 chainNetTarSyr2,1007 chainNetTarSyr2,1016 chainNetTarSyr2,1037 chainNetTarSyr2,1077 chainTarSyr2,18 chainTarSyr2,37 chainTarSyr2,59 chainTarSyr2,71 chainTarSyr2,121 chainTarSyr2,134 chainTarSyr2,151 chainTarSyr2,158 chainTarSyr2,206 chainTarSyr2,211 chainTarSyr2,237 chainTarSyr2,247 chainTarSyr2,252 chainTarSyr2,260 chainTarSyr2,268 chainTarSyr2,272 chainTarSyr2,283 chainTarSyr2,302 chainTarSyr2,311 chainTarSyr2,325 chainTarSyr2,340 chainTarSyr2,346 chainTarSyr2,349 chainTarSyr2,364 chainTarSyr2,370 chainTarSyr2,374 chainTarSyr2,394 chainTarSyr2,400 chainTarSyr2,414 chainTarSyr2,432 chainTarSyr2,449 chainTarSyr2,452 chainTarSyr2,457 chainTarSyr2,470 chainTarSyr2,483 chainTarSyr2,485 chainTarSyr2,492 chainTarSyr2,495 chainTarSyr2,502 chainTarSyr2,508 chainTarSyr2,521 chainTarSyr2,532 chainTarSyr2,536 chainTarSyr2,539 chainTarSyr2,547 chainTarSyr2,551 chainTarSyr2,557 chainTarSyr2,568 chainTarSyr2,571 chainTarSyr2,583 chainTarSyr2,592 chainTarSyr2,594 chainTarSyr2,602 chainTarSyr2,608 chainTarSyr2,617 chainTarSyr2,620 chainTarSyr2,652 chainTarSyr2,657 chainTarSyr2,666 chainTarSyr2,670 chainTarSyr2,677 chainTarSyr2,700 chainTarSyr2,708 chainTarSyr2,778 chainTarSyr2,782 chainTarSyr2,790 chainTarSyr2,794 chainTarSyr2,798 chainTarSyr2,806 chainTarSyr2,851 chainTarSyr2,861 chainTarSyr2,880 chainTarSyr2,883 chainTarSyr2,895 chainTarSyr2,919 chainTarSyr2,961 chainTarSyr2,967 chainTarSyr2,985 chainTarSyr2,992 chainTarSyr2,1004 chainTarSyr2,1013 chainTarSyr2,1034 chainTarSyr2,1074 cpgIslandExt,62 cpgIslandExt,76 cpgIslandExt,82 cpgIslandExt,88 cpgIslandExt,111 cpgIslandExt,142 cpgIslandExt,163 cpgIslandExt,168 cpgIslandExt,172 cpgIslandExt,190 cpgIslandExt,197 cpgIslandExt,201 cpgIslandExt,207 cpgIslandExt,211 cpgIslandExt,215 cpgIslandExt,219 cpgIslandExt,231 cpgIslandExt,259 cpgIslandExt,284 cpgIslandExt,288 cpgIslandExt,291 cpgIslandExt,298 cpgIslandExt,300 cpgIslandExt,310 cpgIslandExt,313 cpgIslandExt,317 cpgIslandExt,324 cpgIslandExt,332 cpgIslandExt,336 cpgIslandExt,342 cpgIslandExt,344 cpgIslandExt,348 cpgIslandExt,355 cpgIslandExt,359 cpgIslandExt,361 cpgIslandExt,372 cpgIslandExt,398 cpgIslandExt,401 cpgIslandExt,407 cpgIslandExt,490 cpgIslandExt,501 cpgIslandExt,517 cpgIslandExt,520 cpgIslandExt,524 cpgIslandExt,528 cpgIslandExt,554 cpgIslandExt,557 cpgIslandExt,567 cpgIslandExtUnmasked,65 cpgIslandExtUnmasked,79 cpgIslandExtUnmasked,85 cpgIslandExtUnmasked,91 cpgIslandExtUnmasked,114 cpgIslandExtUnmasked,145 cpgIslandExtUnmasked,166 cpgIslandExtUnmasked,171 cpgIslandExtUnmasked,175 cpgIslandExtUnmasked,193 cpgIslandExtUnmasked,200 cpgIslandExtUnmasked,204 cpgIslandExtUnmasked,210 cpgIslandExtUnmasked,214 cpgIslandExtUnmasked,218 cpgIslandExtUnmasked,222 cpgIslandExtUnmasked,234 cpgIslandExtUnmasked,262 cpgIslandExtUnmasked,287 cpgIslandExtUnmasked,291 cpgIslandExtUnmasked,294 cpgIslandExtUnmasked,301 cpgIslandExtUnmasked,303 cpgIslandExtUnmasked,313 cpgIslandExtUnmasked,316 cpgIslandExtUnmasked,320 cpgIslandExtUnmasked,327 cpgIslandExtUnmasked,335 cpgIslandExtUnmasked,339 cpgIslandExtUnmasked,345 cpgIslandExtUnmasked,347 cpgIslandExtUnmasked,351 cpgIslandExtUnmasked,358 cpgIslandExtUnmasked,362 cpgIslandExtUnmasked,364 cpgIslandExtUnmasked,375 cpgIslandExtUnmasked,401 cpgIslandExtUnmasked,404 cpgIslandExtUnmasked,410 cpgIslandExtUnmasked,493 cpgIslandExtUnmasked,504 cpgIslandExtUnmasked,520 cpgIslandExtUnmasked,523 cpgIslandExtUnmasked,527 cpgIslandExtUnmasked,531 cpgIslandExtUnmasked,557 cpgIslandExtUnmasked,560 cpgIslandExtUnmasked,570 cpgIslandSuper,62 cpgIslandSuper,76 cpgIslandSuper,82 cpgIslandSuper,88 cpgIslandSuper,111 cpgIslandSuper,142 cpgIslandSuper,163 cpgIslandSuper,168 cpgIslandSuper,172 cpgIslandSuper,190 cpgIslandSuper,197 cpgIslandSuper,201 cpgIslandSuper,207 cpgIslandSuper,211 cpgIslandSuper,215 cpgIslandSuper,219 cpgIslandSuper,231 cpgIslandSuper,259 cpgIslandSuper,284 cpgIslandSuper,288 cpgIslandSuper,291 cpgIslandSuper,298 cpgIslandSuper,300 cpgIslandSuper,310 cpgIslandSuper,313 cpgIslandSuper,317 cpgIslandSuper,324 cpgIslandSuper,332 cpgIslandSuper,336 cpgIslandSuper,342 cpgIslandSuper,344 cpgIslandSuper,348 cpgIslandSuper,355 cpgIslandSuper,359 cpgIslandSuper,361 cpgIslandSuper,372 cpgIslandSuper,398 cpgIslandSuper,401 cpgIslandSuper,407 cpgIslandSuper,490 cpgIslandSuper,501 cpgIslandSuper,517 cpgIslandSuper,520 cpgIslandSuper,524 cpgIslandSuper,528 cpgIslandSuper,554 cpgIslandSuper,557 cpgIslandSuper,567 ensGene,21 ensGene,34 ensGene,51 ensGene,65 ensGene,69 ensGene,75 ensGene,101 ensGene,107 ensGene,190 gap,11 gap,14 gap,28 gap,40 gap,43 gap,50 gap,55 gap,57 gap,63 gap,66 gap,79 gap,85 gap,91 gap,111 gap,115 gap,120 gc5BaseBw,12 gc5BaseBw,17 gc5BaseBw,53 gc5BaseBw,57 gc5BaseBw,68 gc5BaseBw,72 genscan,16 genscan,23 genscan,38 genscan,53 genscan,68 genscan,75 genscan,80 genscan,91 genscan,115 genscan,135 genscan,139 genscan,151 genscan,155 genscan,176 gold,12 gold,16 gold,30 gold,42 gold,49 gold,54 gold,56 gold,62 gold,65 gold,74 gold,79 gold,88 gold,105 gold,110 gold,116 gold,130 gold,135 microsat,43 microsat,46 microsat,56 microsat,82 microsat,84 microsat,91 ncbiRefSeqGenomicDiff,9 nestedRepeats,25 nestedRepeats,28 nestedRepeats,44 nestedRepeats,51 nestedRepeats,65 nestedRepeats,69 nestedRepeats,76 nestedRepeats,100 nestedRepeats,105 nestedRepeats,134 nestedRepeats,142 nestedRepeats,149 nestedRepeats,154 nestedRepeats,185 nestedRepeats,193 nestedRepeats,201 nestedRepeats,215 nestedRepeats,220 nestedRepeats,235 nestedRepeats,242 nestedRepeats,248 nestedRepeats,253 nestedRepeats,278 nestedRepeats,284 nestedRepeats,297 nestedRepeats,313 nestedRepeats,397 nestedRepeats,403 netHg38,18 netHg38,37 netHg38,59 netHg38,71 netHg38,121 netHg38,134 netHg38,151 netHg38,158 netHg38,206 netHg38,211 netHg38,237 netHg38,247 netHg38,252 netHg38,260 netHg38,268 netHg38,272 netHg38,283 netHg38,302 netHg38,311 netHg38,325 netHg38,340 netHg38,346 netHg38,349 netHg38,364 netHg38,370 netHg38,374 netHg38,394 netHg38,400 netHg38,414 netHg38,432 netHg38,449 netHg38,452 netHg38,457 netHg38,470 netHg38,483 netHg38,485 netHg38,492 netHg38,495 netHg38,502 netHg38,508 netHg38,521 netHg38,532 netHg38,536 netHg38,539 netHg38,547 netHg38,551 netHg38,557 netHg38,568 netHg38,571 netHg38,583 netHg38,592 netHg38,594 netHg38,602 netHg38,608 netHg38,617 netHg38,620 netHg38,652 netHg38,657 netHg38,666 netHg38,670 netHg38,677 netHg38,700 netHg38,708 netHg38,778 netHg38,782 netHg38,790 netHg38,794 netHg38,798 netHg38,806 netHg38,851 netHg38,861 netHg38,880 netHg38,883 netHg38,895 netHg38,919 netHg38,961 netHg38,967 netHg38,985 netHg38,992 netHg38,1004 netHg38,1013 netHg38,1034 netHg38,1074 netTarSyr2,18 netTarSyr2,37 netTarSyr2,59 netTarSyr2,71 netTarSyr2,121 netTarSyr2,134 netTarSyr2,151 netTarSyr2,158 netTarSyr2,206 netTarSyr2,211 netTarSyr2,237 netTarSyr2,247 netTarSyr2,252 netTarSyr2,260 netTarSyr2,268 netTarSyr2,272 netTarSyr2,283 netTarSyr2,302 netTarSyr2,311 netTarSyr2,325 netTarSyr2,340 netTarSyr2,346 netTarSyr2,349 netTarSyr2,364 netTarSyr2,370 netTarSyr2,374 netTarSyr2,394 netTarSyr2,400 netTarSyr2,414 netTarSyr2,432 netTarSyr2,449 netTarSyr2,452 netTarSyr2,457 netTarSyr2,470 netTarSyr2,483 netTarSyr2,485 netTarSyr2,492 netTarSyr2,495 netTarSyr2,502 netTarSyr2,508 netTarSyr2,521 netTarSyr2,532 netTarSyr2,536 netTarSyr2,539 netTarSyr2,547 netTarSyr2,551 netTarSyr2,557 netTarSyr2,568 netTarSyr2,571 netTarSyr2,583 netTarSyr2,592 netTarSyr2,594 netTarSyr2,602 netTarSyr2,608 netTarSyr2,617 netTarSyr2,620 netTarSyr2,652 netTarSyr2,657 netTarSyr2,666 netTarSyr2,670 netTarSyr2,677 netTarSyr2,700 netTarSyr2,708 netTarSyr2,778 netTarSyr2,782 netTarSyr2,790 netTarSyr2,794 netTarSyr2,798 netTarSyr2,806 netTarSyr2,851 netTarSyr2,861 netTarSyr2,880 netTarSyr2,883 netTarSyr2,895 netTarSyr2,919 netTarSyr2,961 netTarSyr2,967 netTarSyr2,985 netTarSyr2,992 netTarSyr2,1004 netTarSyr2,1013 netTarSyr2,1034 netTarSyr2,1074 refSeqComposite,12 refSeqComposite,28 refSeqComposite,44 refSeqComposite,53 refSeqComposite,57 refSeqComposite,67 refSeqComposite,91 refSeqComposite,99 refSeqComposite,134 refSeqComposite,166 refSeqComposite,170 refSeqComposite,186 refSeqComposite,241 refSeqComposite,282 refSeqComposite,285 refSeqComposite,291 refSeqComposite,308 refSeqComposite,314 refSeqComposite,326 refSeqComposite,334 refSeqComposite,370 refSeqComposite,374 refSeqComposite,387 refSeqComposite,394 refSeqComposite,399 refSeqComposite,403 refSeqComposite,442 refSeqComposite,449 refSeqComposite,453 refSeqComposite,465 refSeqComposite,500 refSeqComposite,511 refSeqComposite,533 refSeqComposite,564 refSeqComposite,575 refSeqComposite,583 refSeqComposite,591 refSeqComposite,603 refSeqComposite,610 refSeqComposite,614 refSeqComposite,618 refSeqComposite,639 refSeqComposite,652 refSeqComposite,662 refSeqComposite,675 refSeqComposite,686 refSeqComposite,700 refSeqComposite,715 refSeqComposite,720 refSeqComposite,736 refSeqComposite,740 refSeqComposite,743 refSeqComposite,749 refSeqComposite,756 refSeqComposite,761 refSeqComposite,765 refSeqComposite,778 refSeqComposite,784 refSeqComposite,792 refSeqComposite,804 refSeqComposite,815 refSeqComposite,843 refSeqComposite,848 refSeqComposite,863 refSeqComposite,872 refSeqComposite,883 refSeqComposite,888 refSeqComposite,892 refSeqComposite,911 refSeqComposite,917 refSeqComposite,925 refSeqComposite,931 refSeqComposite,981 refSeqComposite,1005 refSeqComposite,1009 refSeqComposite,1012 refSeqComposite,1016 refSeqComposite,1020 refSeqComposite,1055 refSeqComposite,1067 refSeqComposite,1114 refSeqComposite,1119 refSeqComposite,1125 refSeqComposite,1134 refSeqComposite,1148 refSeqComposite,1163 refSeqComposite,1180 refSeqComposite,1189 refSeqComposite,1194 refSeqComposite,1202 refSeqComposite,1216 refSeqComposite,1224 refSeqComposite,1237 refSeqComposite,1262 refSeqComposite,1265 refSeqComposite,1281 refSeqComposite,1290 refSeqComposite,1297 refSeqComposite,1315 refSeqComposite,1323 refSeqComposite,1344 refSeqComposite,1351 refSeqComposite,1372 refSeqComposite,1375 refSeqComposite,1392 refSeqComposite,1402 refSeqComposite,1431 refSeqComposite,1454 refSeqComposite,1470 refSeqComposite,1475 refSeqComposite,1478 refSeqComposite,1503 refSeqComposite,1521 refSeqComposite,1534 refSeqComposite,1552 refSeqComposite,1577 refSeqComposite,1582 refSeqComposite,1586 refSeqComposite,1598 refSeqComposite,1603 refSeqComposite,1607 refSeqComposite,1611 refSeqComposite,1617 refSeqComposite,1649 refSeqComposite,1654 refSeqComposite,1657 refSeqComposite,1664 refSeqComposite,1674 refSeqComposite,1703 refSeqComposite,1732 refSeqComposite,1740 rmsk,33 rmsk,40 rmsk,46 rmsk,60 rmsk,66 rmsk,75 rmsk,80 rmsk,87 rmsk,101 rmsk,118 rmsk,204 rmsk,210 rmsk,214 rmsk,229 rmsk,231 rmsk,236 rmsk,238 rmsk,244 rmsk,247 rmsk,260 rmsk,265 rmsk,271 rmsk,274 rmsk,281 rmsk,291 rmsk,320 rmsk,336 rmsk,420 rmsk,426 simpleRepeat,60 transMapEnsemblV5,24 transMapEnsemblV5,34 transMapEnsemblV5,71 transMapEnsemblV5,86 transMapEnsemblV5,100 transMapEnsemblV5,121 transMapEnsemblV5,128 transMapEnsemblV5,163 transMapEnsemblV5,180 transMapEnsemblV5,203 transMapEnsemblV5,212 transMapEnsemblV5,255 transMapEnsemblV5,259 transMapEnsemblV5,263 transMapEnsemblV5,275 transMapEnsemblV5,281 transMapEnsemblV5,298 transMapEnsemblV5,306 transMapEnsemblV5,313 transMapEnsemblV5,315 transMapEnsemblV5,326 transMapEnsemblV5,331 transMapEnsemblV5,335 transMapEnsemblV5,345 transMapEnsemblV5,349 transMapEnsemblV5,351 transMapEnsemblV5,382 transMapEnsemblV5,409 transMapEnsemblV5,419 transMapEnsemblV5,422 transMapEnsemblV5,444 transMapEnsemblV5,453 transMapEnsemblV5,466 transMapEnsemblV5,476 transMapEnsemblV5,488 transMapEnsemblV5,509 transMapEnsemblV5,523 transMapEnsemblV5,534 transMapEnsemblV5,538 transMapEnsemblV5,544 transMapEnsemblV5,583 transMapEnsemblV5,591 transMapEnsemblV5,609 transMapEnsemblV5,625 transMapEnsemblV5,648 transMapEnsemblV5,697 transMapEnsemblV5,709 transMapEnsemblV5,811 transMapEstV5,22 transMapEstV5,32 transMapEstV5,40 transMapEstV5,55 transMapEstV5,69 transMapEstV5,90 transMapEstV5,97 transMapEstV5,132 transMapEstV5,149 transMapEstV5,172 transMapEstV5,181 transMapEstV5,224 transMapEstV5,228 transMapEstV5,232 transMapEstV5,244 transMapEstV5,250 transMapEstV5,267 transMapEstV5,275 transMapEstV5,282 transMapEstV5,284 transMapEstV5,295 transMapEstV5,300 transMapEstV5,304 transMapEstV5,314 transMapEstV5,318 transMapEstV5,320 transMapEstV5,351 transMapEstV5,378 transMapEstV5,388 transMapEstV5,391 transMapEstV5,413 transMapEstV5,422 transMapEstV5,435 transMapEstV5,445 transMapEstV5,457 transMapEstV5,478 transMapEstV5,492 transMapEstV5,503 transMapEstV5,507 transMapEstV5,513 transMapEstV5,552 transMapEstV5,560 transMapEstV5,578 transMapEstV5,594 transMapEstV5,617 transMapEstV5,666 transMapEstV5,678 transMapEstV5,780 transMapRefSeqV5,22 transMapRefSeqV5,32 transMapRefSeqV5,40 transMapRefSeqV5,55 transMapRefSeqV5,69 transMapRefSeqV5,90 transMapRefSeqV5,97 transMapRefSeqV5,132 transMapRefSeqV5,149 transMapRefSeqV5,172 transMapRefSeqV5,181 transMapRefSeqV5,224 transMapRefSeqV5,228 transMapRefSeqV5,232 transMapRefSeqV5,244 transMapRefSeqV5,250 transMapRefSeqV5,267 transMapRefSeqV5,275 transMapRefSeqV5,282 transMapRefSeqV5,284 transMapRefSeqV5,295 transMapRefSeqV5,300 transMapRefSeqV5,304 transMapRefSeqV5,314 transMapRefSeqV5,318 transMapRefSeqV5,320 transMapRefSeqV5,351 transMapRefSeqV5,378 transMapRefSeqV5,388 transMapRefSeqV5,391 transMapRefSeqV5,413 transMapRefSeqV5,422 transMapRefSeqV5,435 transMapRefSeqV5,445 transMapRefSeqV5,457 transMapRefSeqV5,478 transMapRefSeqV5,492 transMapRefSeqV5,503 transMapRefSeqV5,507 transMapRefSeqV5,513 transMapRefSeqV5,552 transMapRefSeqV5,560 transMapRefSeqV5,578 transMapRefSeqV5,594 transMapRefSeqV5,617 transMapRefSeqV5,666 transMapRefSeqV5,678 transMapRefSeqV5,780 transMapRnaV5,22 transMapRnaV5,32 transMapRnaV5,40 transMapRnaV5,55 transMapRnaV5,69 transMapRnaV5,90 transMapRnaV5,97 transMapRnaV5,132 transMapRnaV5,149 transMapRnaV5,172 transMapRnaV5,181 transMapRnaV5,224 transMapRnaV5,228 transMapRnaV5,232 transMapRnaV5,244 transMapRnaV5,250 transMapRnaV5,267 transMapRnaV5,275 transMapRnaV5,282 transMapRnaV5,284 transMapRnaV5,295 transMapRnaV5,300 transMapRnaV5,304 transMapRnaV5,314 transMapRnaV5,318 transMapRnaV5,320 transMapRnaV5,351 transMapRnaV5,378 transMapRnaV5,388 transMapRnaV5,391 transMapRnaV5,413 transMapRnaV5,422 transMapRnaV5,435 transMapRnaV5,445 transMapRnaV5,457 transMapRnaV5,478 transMapRnaV5,492 transMapRnaV5,503 transMapRnaV5,507 transMapRnaV5,513 transMapRnaV5,552 transMapRnaV5,560 transMapRnaV5,578 transMapRnaV5,594 transMapRnaV5,617 transMapRnaV5,666 transMapRnaV5,678 transMapRnaV5,780 transMapV5,21 transMapV5,31 transMapV5,39 transMapV5,56 transMapV5,93 transMapV5,100 transMapV5,105 transMapV5,123 transMapV5,128 transMapV5,134 transMapV5,138 transMapV5,175 transMapV5,196 transMapV5,203 transMapV5,238 transMapV5,255 transMapV5,278 transMapV5,287 transMapV5,330 transMapV5,334 transMapV5,338 transMapV5,350 transMapV5,356 transMapV5,373 transMapV5,381 transMapV5,388 transMapV5,390 transMapV5,401 transMapV5,406 transMapV5,410 transMapV5,420 transMapV5,424 transMapV5,426 transMapV5,457 transMapV5,484 transMapV5,494 transMapV5,497 transMapV5,519 transMapV5,528 transMapV5,541 transMapV5,551 transMapV5,563 transMapV5,584 transMapV5,598 transMapV5,609 transMapV5,613 transMapV5,619 transMapV5,658 transMapV5,666 transMapV5,684 transMapV5,700 transMapV5,723 transMapV5,772 transMapV5,784 transMapV5,886 ucscToINSDC,26 ucscToINSDC,33 ucscToINSDC,38 ucscToINSDC,43 ucscToRefSeq,21 ucscToRefSeq,27 ucscToRefSeq,32 ucscToRefSeq,37 uniprot,22 uniprot,40 uniprot,53 uniprot,69 uniprot,81 uniprot,87 uniprot,94 uniprot,102 uniprot,119 uniprot,184 uniprot,202 uniprot,215 uniprot,233 uniprot,259 uniprot,270 uniprot,281 uniprot,308 uniprot,379 uniprot,410 uniprot,421 uniprot,428 uniprot,444 uniprot,463 uniprot,485 uniprot,493 uniprot,510 uniprot,527 uniprot,534 uniprot,539 uniprot,543 uniprot,547 uniprot,562 uniprot,571 uniprot,607 uniprot,640 uniprot,649 uniprot,668 uniprot,698 uniprot,748 uniprot,785 uniprot,789 uniprot,791 uniprot,797 uniprot,802 uniprot,810 uniprot,812 uniprot,819 uniprot,832 uniprot,836 uniprot,855 uniprot,873 uniprot,883 uniprot,903 uniprot,913 uniprot,923 uniprot,927 uniprot,935 uniprot,944 uniprot,947 uniprot,953 uniprot,961 uniprot,969 uniprot,1009 uniprot,1036 uniprot,1039 uniprot,1054 uniprot,1090 uniprot,1112 uniprot,1126 uniprot,1136 uniprot,1140 uniprot,1156 uniprot,1172 uniprot,1212 uniprot,1221 uniprot,1243 uniprot,1253 uniprot,1267 uniprot,1273 uniprot,1278 uniprot,1294 uniprot,1303 uniprot,1307 uniprot,1321 uniprot,1332 uniprot,1339 uniprot,1358 uniprot,1372 uniprot,1376 uniprot,1384 uniprot,1388 uniprot,1409 uniprot,1414 uniprot,1428 uniprot,1431 uniprot,1462 uniprot,1508 uniprot,1512 uniprot,1519 uniprot,1522 uniprot,1527 uniprot,1535 uniprot,1547 uniprot,1574 uniprot,1582 uniprot,1588 uniprot,1592 uniprot,1595 uniprot,1606 uniprot,1609 uniprot,1612 uniprot,1618 uniprot,1621 uniprot,1628 uniprot,1640 uniprot,1664 uniprot,1667 uniprot,1678 uniprot,1681 uniprot,1701 uniprot,1707 uniprot,1711 uniprot,1719 uniprot,1723 uniprot,1729 uniprot,1743 uniprot,1746 uniprot,1753 uniprot,1773 uniprot,1796 uniprot,1857 uniprot,1861 uniprot,1893 uniprot,1963 uniprot,1988 uniprot,1992 uniprot,2024 uniprot,2029 windowmaskerSdust,22 windowmaskerSdust,28 windowmaskerSdust,32 windowmaskerSdust,36 windowmaskerSdust,42 windowmaskerSdust,55 windowmaskerSdust,74 windowmaskerSdust,81 xenoRefGene,30 xenoRefGene,37 xenoRefGene,52 xenoRefGene,59 xenoRefGene,63 xenoRefGene,67 xenoRefGene,78 xenoRefGene,93 xenoRefGene,96 xenoRefGene,99 xenoRefGene,113 xenoRefGene,119 xenoRefGene,124 xenoRefGene,129 xenoRefGene,137 xenoRefGene,165 xenoRefGene,170 xenoRefGene,185 xenoRefGene,200 xenoRefGene,213 xenoRefGene,220 xenoRefGene,225 xenoRefGene,250 xenoRefGene,253 xenoRefGene,269 xenoRefGene,278 xenoRefGene,301 their nestedRepeats,190 uniprot,62 uniprot,723 uniprot,1101 them chainHg38,813 chainNetHg38,816 chainNetTarSyr2,816 chainTarSyr2,813 cpgIslandExt,126 cpgIslandExtUnmasked,129 cpgIslandSuper,126 netHg38,813 netTarSyr2,813 rmsk,318 uniprot,20 uniprot,173 uniprot,483 then chainHg38,663 chainHg38,802 chainHg38,887 chainNetHg38,666 chainNetHg38,805 chainNetHg38,890 chainNetTarSyr2,666 chainNetTarSyr2,805 chainNetTarSyr2,890 chainTarSyr2,663 chainTarSyr2,802 chainTarSyr2,887 cpgIslandExt,256 cpgIslandExtUnmasked,259 cpgIslandSuper,256 nestedRepeats,232 netHg38,663 netHg38,802 netHg38,887 netTarSyr2,663 netTarSyr2,802 netTarSyr2,887 transMapV5,131 uniprot,1083 uniprot,1516 there cpgIslandExt,120 cpgIslandExtUnmasked,123 cpgIslandSuper,120 transMapEnsemblV5,456 transMapEstV5,425 transMapRefSeqV5,425 transMapRnaV5,425 transMapV5,531 uniprot,705 uniprot,1092 therefore gold,124 refSeqComposite,1640 uniprot,968 uniprot,1145 these augustusGene,95 augustusGene,190 chainHg38,52 chainHg38,104 chainHg38,419 chainHg38,675 chainNetHg38,55 chainNetHg38,107 chainNetHg38,422 chainNetHg38,678 chainNetTarSyr2,55 chainNetTarSyr2,107 chainNetTarSyr2,422 chainNetTarSyr2,678 chainTarSyr2,52 chainTarSyr2,104 chainTarSyr2,419 chainTarSyr2,675 ensGene,10 ensGene,154 microsat,24 nestedRepeats,262 nestedRepeats,266 netHg38,52 netHg38,104 netHg38,419 netHg38,675 netTarSyr2,52 netTarSyr2,104 netTarSyr2,419 netTarSyr2,675 refSeqComposite,323 refSeqComposite,333 refSeqComposite,801 refSeqComposite,1301 refSeqComposite,1437 rmsk,235 simpleRepeat,33 transMapEnsemblV5,463 transMapEnsemblV5,472 transMapEnsemblV5,527 transMapEnsemblV5,588 transMapEstV5,432 transMapEstV5,441 transMapEstV5,496 transMapEstV5,557 transMapRefSeqV5,432 transMapRefSeqV5,441 transMapRefSeqV5,496 transMapRefSeqV5,557 transMapRnaV5,432 transMapRnaV5,441 transMapRnaV5,496 transMapRnaV5,557 transMapV5,12 transMapV5,538 transMapV5,547 transMapV5,602 transMapV5,663 uniprot,99 uniprot,130 uniprot,1160 thesis chainHg38,1033 chainNetHg38,1036 chainNetTarSyr2,1036 chainTarSyr2,1033 netHg38,1033 netTarSyr2,1033 they chainHg38,336 chainNetHg38,339 chainNetTarSyr2,339 chainTarSyr2,336 netHg38,336 netTarSyr2,336 refSeqComposite,249 refSeqComposite,293 refSeqComposite,358 refSeqComposite,420 uniprot,179 thibaud-nissen refSeqComposite,1761 xenoRefGene,329 thick chainHg38,43 chainNetHg38,46 chainNetTarSyr2,46 chainTarSyr2,43 netHg38,43 netTarSyr2,43 refSeqComposite,1001 refSeqComposite,1017 thin refSeqComposite,999 refSeqComposite,1006 this augustusGene,13 augustusGene,106 augustusGene,224 chainHg38,13 chainHg38,176 chainHg38,307 chainHg38,406 chainHg38,706 chainHg38,828 chainNetHg38,16 chainNetHg38,179 chainNetHg38,310 chainNetHg38,409 chainNetHg38,709 chainNetHg38,831 chainNetTarSyr2,16 chainNetTarSyr2,179 chainNetTarSyr2,310 chainNetTarSyr2,409 chainNetTarSyr2,709 chainNetTarSyr2,831 chainTarSyr2,13 chainTarSyr2,176 chainTarSyr2,307 chainTarSyr2,406 chainTarSyr2,706 chainTarSyr2,828 cpgIslandExt,72 cpgIslandExt,222 cpgIslandExt,585 cpgIslandExtUnmasked,75 cpgIslandExtUnmasked,225 cpgIslandExtUnmasked,588 cpgIslandSuper,72 cpgIslandSuper,222 cpgIslandSuper,585 ensGene,119 ensGene,135 gap,8 gap,38 gap,46 gap,76 gap,117 gc5BaseBw,38 gc5BaseBw,77 genscan,11 genscan,65 genscan,128 gold,9 gold,40 gold,45 gold,71 gold,141 microsat,11 microsat,50 microsat,99 nestedRepeats,15 nestedRepeats,79 nestedRepeats,321 netHg38,13 netHg38,176 netHg38,307 netHg38,406 netHg38,706 netHg38,828 netTarSyr2,13 netTarSyr2,176 netTarSyr2,307 netTarSyr2,406 netTarSyr2,706 netTarSyr2,828 refSeqComposite,59 refSeqComposite,146 refSeqComposite,505 refSeqComposite,569 refSeqComposite,730 refSeqComposite,820 refSeqComposite,859 refSeqComposite,1395 refSeqComposite,1443 refSeqComposite,1631 refSeqComposite,1717 rmsk,10 rmsk,51 rmsk,143 rmsk,344 simpleRepeat,12 simpleRepeat,31 transMapEnsemblV5,15 transMapEnsemblV5,97 transMapEnsemblV5,107 transMapEnsemblV5,135 transMapEnsemblV5,290 transMapEnsemblV5,680 transMapEstV5,13 transMapEstV5,66 transMapEstV5,76 transMapEstV5,104 transMapEstV5,259 transMapEstV5,649 transMapRefSeqV5,14 transMapRefSeqV5,66 transMapRefSeqV5,76 transMapRefSeqV5,104 transMapRefSeqV5,259 transMapRefSeqV5,649 transMapRnaV5,14 transMapRnaV5,66 transMapRnaV5,76 transMapRnaV5,104 transMapRnaV5,259 transMapRnaV5,649 transMapV5,172 transMapV5,182 transMapV5,210 transMapV5,365 transMapV5,755 ucscToINSDC,14 ucscToINSDC,46 ucscToRefSeq,9 ucscToRefSeq,40 uniprot,12 uniprot,134 uniprot,149 uniprot,218 uniprot,220 uniprot,653 uniprot,663 uniprot,871 uniprot,878 uniprot,1018 uniprot,1058 uniprot,1063 uniprot,1248 uniprot,1259 uniprot,1352 uniprot,1447 uniprot,1530 uniprot,1553 uniprot,1562 uniprot,1657 uniprot,1674 uniprot,1688 uniprot,1939 windowmaskerSdust,13 windowmaskerSdust,49 windowmaskerSdust,87 xenoRefGene,13 xenoRefGene,40 xenoRefGene,49 xenoRefGene,87 xenoRefGene,142 xenoRefGene,181 xenoRefGene,217 xenoRefGene,284 those microsat,62 nestedRepeats,272 refSeqComposite,220 refSeqComposite,349 refSeqComposite,1244 uniprot,729 xenoRefGene,232 thousands chainHg38,258 chainNetHg38,261 chainNetTarSyr2,261 chainTarSyr2,258 netHg38,258 netTarSyr2,258 three uniprot,1227 three-step uniprot,989 through gap,110 nestedRepeats,97 refSeqComposite,735 refSeqComposite,1330 refSeqComposite,1368 rmsk,309 transMapEnsemblV5,533 transMapEstV5,502 transMapRefSeqV5,502 transMapRnaV5,502 transMapV5,608 uniprot,98 uniprot,133 uniprot,633 uniprot,804 uniprot,1521 xenoRefGene,92 time chainHg38,811 chainNetHg38,814 chainNetTarSyr2,814 chainTarSyr2,811 cpgIslandExt,99 cpgIslandExt,237 cpgIslandExtUnmasked,102 cpgIslandExtUnmasked,240 cpgIslandSuper,99 cpgIslandSuper,237 netHg38,811 netTarSyr2,811 to augustusGene,115 augustusGene,170 augustusGene,249 augustusGene,301 chainHg38,23 chainHg38,70 chainHg38,147 chainHg38,219 chainHg38,231 chainHg38,327 chainHg38,338 chainHg38,343 chainHg38,355 chainHg38,361 chainHg38,384 chainHg38,465 chainHg38,479 chainHg38,563 chainHg38,668 chainHg38,804 chainHg38,816 chainHg38,856 chainHg38,879 chainHg38,889 chainNetHg38,26 chainNetHg38,73 chainNetHg38,150 chainNetHg38,222 chainNetHg38,234 chainNetHg38,330 chainNetHg38,341 chainNetHg38,346 chainNetHg38,358 chainNetHg38,364 chainNetHg38,387 chainNetHg38,468 chainNetHg38,482 chainNetHg38,566 chainNetHg38,671 chainNetHg38,807 chainNetHg38,819 chainNetHg38,859 chainNetHg38,882 chainNetHg38,892 chainNetTarSyr2,26 chainNetTarSyr2,73 chainNetTarSyr2,150 chainNetTarSyr2,222 chainNetTarSyr2,234 chainNetTarSyr2,330 chainNetTarSyr2,341 chainNetTarSyr2,346 chainNetTarSyr2,358 chainNetTarSyr2,364 chainNetTarSyr2,387 chainNetTarSyr2,468 chainNetTarSyr2,482 chainNetTarSyr2,566 chainNetTarSyr2,671 chainNetTarSyr2,807 chainNetTarSyr2,819 chainNetTarSyr2,859 chainNetTarSyr2,882 chainNetTarSyr2,892 chainTarSyr2,23 chainTarSyr2,70 chainTarSyr2,147 chainTarSyr2,219 chainTarSyr2,231 chainTarSyr2,327 chainTarSyr2,338 chainTarSyr2,343 chainTarSyr2,355 chainTarSyr2,361 chainTarSyr2,384 chainTarSyr2,465 chainTarSyr2,479 chainTarSyr2,563 chainTarSyr2,668 chainTarSyr2,804 chainTarSyr2,816 chainTarSyr2,856 chainTarSyr2,879 chainTarSyr2,889 cpgIslandExt,69 cpgIslandExt,103 cpgIslandExt,124 cpgIslandExt,139 cpgIslandExt,205 cpgIslandExt,283 cpgIslandExt,358 cpgIslandExt,365 cpgIslandExt,371 cpgIslandExtUnmasked,72 cpgIslandExtUnmasked,106 cpgIslandExtUnmasked,127 cpgIslandExtUnmasked,142 cpgIslandExtUnmasked,208 cpgIslandExtUnmasked,286 cpgIslandExtUnmasked,361 cpgIslandExtUnmasked,368 cpgIslandExtUnmasked,374 cpgIslandSuper,69 cpgIslandSuper,103 cpgIslandSuper,124 cpgIslandSuper,139 cpgIslandSuper,205 cpgIslandSuper,283 cpgIslandSuper,358 cpgIslandSuper,365 cpgIslandSuper,371 ensGene,43 ensGene,149 gc5BaseBw,48 genscan,95 genscan,105 genscan,114 genscan,145 genscan,171 gold,133 microsat,18 microsat,38 microsat,121 nestedRepeats,148 nestedRepeats,152 nestedRepeats,174 nestedRepeats,184 nestedRepeats,200 nestedRepeats,225 nestedRepeats,234 nestedRepeats,260 nestedRepeats,304 nestedRepeats,319 netHg38,23 netHg38,70 netHg38,147 netHg38,219 netHg38,231 netHg38,327 netHg38,338 netHg38,343 netHg38,355 netHg38,361 netHg38,384 netHg38,465 netHg38,479 netHg38,563 netHg38,668 netHg38,804 netHg38,816 netHg38,856 netHg38,879 netHg38,889 netTarSyr2,23 netTarSyr2,70 netTarSyr2,147 netTarSyr2,219 netTarSyr2,231 netTarSyr2,327 netTarSyr2,338 netTarSyr2,343 netTarSyr2,355 netTarSyr2,361 netTarSyr2,384 netTarSyr2,465 netTarSyr2,479 netTarSyr2,563 netTarSyr2,668 netTarSyr2,804 netTarSyr2,816 netTarSyr2,856 netTarSyr2,879 netTarSyr2,889 refSeqComposite,56 refSeqComposite,116 refSeqComposite,157 refSeqComposite,169 refSeqComposite,175 refSeqComposite,307 refSeqComposite,310 refSeqComposite,325 refSeqComposite,369 refSeqComposite,441 refSeqComposite,499 refSeqComposite,683 refSeqComposite,708 refSeqComposite,747 refSeqComposite,760 refSeqComposite,782 refSeqComposite,831 refSeqComposite,838 refSeqComposite,862 refSeqComposite,909 refSeqComposite,915 refSeqComposite,923 refSeqComposite,929 refSeqComposite,942 refSeqComposite,984 refSeqComposite,1033 refSeqComposite,1066 refSeqComposite,1102 refSeqComposite,1113 refSeqComposite,1179 refSeqComposite,1447 refSeqComposite,1541 refSeqComposite,1594 refSeqComposite,1693 rmsk,147 rmsk,315 rmsk,327 rmsk,342 simpleRepeat,81 transMapEnsemblV5,113 transMapEnsemblV5,123 transMapEnsemblV5,179 transMapEnsemblV5,202 transMapEnsemblV5,262 transMapEnsemblV5,295 transMapEnsemblV5,303 transMapEnsemblV5,320 transMapEnsemblV5,334 transMapEnsemblV5,348 transMapEnsemblV5,387 transMapEnsemblV5,432 transMapEnsemblV5,442 transMapEnsemblV5,475 transMapEnsemblV5,481 transMapEnsemblV5,494 transMapEnsemblV5,654 transMapEnsemblV5,696 transMapEnsemblV5,775 transMapEstV5,82 transMapEstV5,92 transMapEstV5,148 transMapEstV5,171 transMapEstV5,231 transMapEstV5,264 transMapEstV5,272 transMapEstV5,289 transMapEstV5,303 transMapEstV5,317 transMapEstV5,356 transMapEstV5,401 transMapEstV5,411 transMapEstV5,444 transMapEstV5,450 transMapEstV5,463 transMapEstV5,623 transMapEstV5,665 transMapEstV5,744 transMapRefSeqV5,82 transMapRefSeqV5,92 transMapRefSeqV5,148 transMapRefSeqV5,171 transMapRefSeqV5,231 transMapRefSeqV5,264 transMapRefSeqV5,272 transMapRefSeqV5,289 transMapRefSeqV5,303 transMapRefSeqV5,317 transMapRefSeqV5,356 transMapRefSeqV5,401 transMapRefSeqV5,411 transMapRefSeqV5,444 transMapRefSeqV5,450 transMapRefSeqV5,463 transMapRefSeqV5,623 transMapRefSeqV5,665 transMapRefSeqV5,744 transMapRnaV5,82 transMapRnaV5,92 transMapRnaV5,148 transMapRnaV5,171 transMapRnaV5,231 transMapRnaV5,264 transMapRnaV5,272 transMapRnaV5,289 transMapRnaV5,303 transMapRnaV5,317 transMapRnaV5,356 transMapRnaV5,401 transMapRnaV5,411 transMapRnaV5,444 transMapRnaV5,450 transMapRnaV5,463 transMapRnaV5,623 transMapRnaV5,665 transMapRnaV5,744 transMapV5,81 transMapV5,91 transMapV5,122 transMapV5,133 transMapV5,156 transMapV5,188 transMapV5,198 transMapV5,254 transMapV5,277 transMapV5,337 transMapV5,370 transMapV5,378 transMapV5,395 transMapV5,409 transMapV5,423 transMapV5,462 transMapV5,507 transMapV5,517 transMapV5,550 transMapV5,556 transMapV5,569 transMapV5,729 transMapV5,771 transMapV5,850 ucscToINSDC,22 ucscToRefSeq,17 unipAliSwissprot,8 unipAliTrembl,8 uniprot,27 uniprot,86 uniprot,101 uniprot,118 uniprot,201 uniprot,214 uniprot,226 uniprot,245 uniprot,492 uniprot,525 uniprot,552 uniprot,559 uniprot,658 uniprot,682 uniprot,764 uniprot,784 uniprot,801 uniprot,849 uniprot,917 uniprot,920 uniprot,955 uniprot,974 uniprot,1008 uniprot,1088 uniprot,1196 uniprot,1215 uniprot,1220 uniprot,1247 uniprot,1285 uniprot,1336 uniprot,1356 uniprot,1369 uniprot,1405 uniprot,1413 uniprot,1460 uniprot,1473 uniprot,1478 uniprot,1493 uniprot,1518 uniprot,1551 uniprot,1676 uniprot,1761 uniprot,1802 uniprot,1828 uniprot,1846 uniprot,1851 uniprot,1856 uniprot,1884 uniprot,1890 uniprot,1975 windowmaskerSdust,47 xenoRefGene,117 xenoRefGene,153 xenoRefGene,160 xenoRefGene,184 xenoRefGene,210 together chainHg38,127 chainNetHg38,130 chainNetTarSyr2,130 chainTarSyr2,127 netHg38,127 netTarSyr2,127 tolerate chainHg38,94 chainNetHg38,97 chainNetTarSyr2,97 chainTarSyr2,94 netHg38,94 netTarSyr2,94 tolerated uniprot,1257 too refSeqComposite,940 tool refSeqComposite,1514 refSeqComposite,1743 transMapEnsemblV5,618 transMapEnsemblV5,649 transMapEstV5,587 transMapEstV5,618 transMapRefSeqV5,587 transMapRefSeqV5,618 transMapRnaV5,587 transMapRnaV5,618 transMapV5,693 transMapV5,724 uniprot,1766 uniprot,1797 windowmaskerSdust,24 xenoRefGene,311 toolkit windowmaskerSdust,31 windowmaskerSdust,38 tools nestedRepeats,314 rmsk,337 uniprot,1873 top chainHg38,520 chainNetHg38,523 chainNetTarSyr2,523 chainTarSyr2,520 cpgIslandExt,220 cpgIslandExtUnmasked,223 cpgIslandSuper,220 netHg38,520 netTarSyr2,520 refSeqComposite,741 uniprot,1304 uniprot,1340 uniprot,1489 xenoRefGene,97 top-level chainHg38,395 chainHg38,415 chainNetHg38,398 chainNetHg38,418 chainNetTarSyr2,398 chainNetTarSyr2,418 chainTarSyr2,395 chainTarSyr2,415 netHg38,395 netHg38,415 netTarSyr2,395 netTarSyr2,415 top-scoring uniprot,792 topological uniprot,330 track augustusGene,14 augustusGene,107 chainHg38,14 chainHg38,58 chainHg38,61 chainHg38,123 chainHg38,267 chainHg38,270 chainHg38,322 chainHg38,357 chainHg38,389 chainHg38,576 chainHg38,707 chainHg38,770 chainNetHg38,17 chainNetHg38,61 chainNetHg38,64 chainNetHg38,126 chainNetHg38,270 chainNetHg38,273 chainNetHg38,325 chainNetHg38,360 chainNetHg38,392 chainNetHg38,579 chainNetHg38,710 chainNetHg38,773 chainNetTarSyr2,17 chainNetTarSyr2,61 chainNetTarSyr2,64 chainNetTarSyr2,126 chainNetTarSyr2,270 chainNetTarSyr2,273 chainNetTarSyr2,325 chainNetTarSyr2,360 chainNetTarSyr2,392 chainNetTarSyr2,579 chainNetTarSyr2,710 chainNetTarSyr2,773 chainTarSyr2,14 chainTarSyr2,58 chainTarSyr2,61 chainTarSyr2,123 chainTarSyr2,267 chainTarSyr2,270 chainTarSyr2,322 chainTarSyr2,357 chainTarSyr2,389 chainTarSyr2,576 chainTarSyr2,707 chainTarSyr2,770 cpgIslandExt,173 cpgIslandExt,202 cpgIslandExt,216 cpgIslandExt,314 cpgIslandExt,318 cpgIslandExt,402 cpgIslandExt,492 cpgIslandExt,586 cpgIslandExtUnmasked,176 cpgIslandExtUnmasked,205 cpgIslandExtUnmasked,219 cpgIslandExtUnmasked,317 cpgIslandExtUnmasked,321 cpgIslandExtUnmasked,405 cpgIslandExtUnmasked,495 cpgIslandExtUnmasked,589 cpgIslandSuper,173 cpgIslandSuper,202 cpgIslandSuper,216 cpgIslandSuper,314 cpgIslandSuper,318 cpgIslandSuper,402 cpgIslandSuper,492 cpgIslandSuper,586 ensGene,136 gap,9 gap,77 gc5BaseBw,15 gc5BaseBw,39 genscan,12 genscan,66 genscan,76 genscan,87 gold,10 gold,72 gold,142 microsat,12 microsat,51 microsat,59 microsat,87 nestedRepeats,16 nestedRepeats,78 nestedRepeats,80 nestedRepeats,322 netHg38,14 netHg38,58 netHg38,61 netHg38,123 netHg38,267 netHg38,270 netHg38,322 netHg38,357 netHg38,389 netHg38,576 netHg38,707 netHg38,770 netTarSyr2,14 netTarSyr2,58 netTarSyr2,61 netTarSyr2,123 netTarSyr2,267 netTarSyr2,270 netTarSyr2,322 netTarSyr2,357 netTarSyr2,389 netTarSyr2,576 netTarSyr2,707 netTarSyr2,770 refSeqComposite,17 refSeqComposite,47 refSeqComposite,147 refSeqComposite,151 refSeqComposite,313 refSeqComposite,317 refSeqComposite,330 refSeqComposite,337 refSeqComposite,476 refSeqComposite,506 refSeqComposite,516 refSeqComposite,570 refSeqComposite,731 refSeqComposite,744 refSeqComposite,762 refSeqComposite,821 refSeqComposite,850 refSeqComposite,875 refSeqComposite,1205 refSeqComposite,1220 refSeqComposite,1346 refSeqComposite,1718 rmsk,11 rmsk,52 rmsk,144 rmsk,345 simpleRepeat,13 transMapEnsemblV5,16 transMapEnsemblV5,98 transMapEnsemblV5,108 transMapEnsemblV5,235 transMapEnsemblV5,575 transMapEnsemblV5,579 transMapEnsemblV5,681 transMapEstV5,14 transMapEstV5,67 transMapEstV5,77 transMapEstV5,204 transMapEstV5,544 transMapEstV5,548 transMapEstV5,650 transMapRefSeqV5,15 transMapRefSeqV5,67 transMapRefSeqV5,77 transMapRefSeqV5,204 transMapRefSeqV5,544 transMapRefSeqV5,548 transMapRefSeqV5,650 transMapRnaV5,15 transMapRnaV5,67 transMapRnaV5,77 transMapRnaV5,204 transMapRnaV5,544 transMapRnaV5,548 transMapRnaV5,650 transMapV5,103 transMapV5,173 transMapV5,183 transMapV5,310 transMapV5,650 transMapV5,654 transMapV5,756 ucscToINSDC,15 ucscToINSDC,47 ucscToRefSeq,10 ucscToRefSeq,41 uniprot,13 uniprot,104 uniprot,150 uniprot,219 uniprot,221 uniprot,234 uniprot,422 uniprot,429 uniprot,576 uniprot,654 uniprot,710 uniprot,1004 uniprot,1208 uniprot,1277 uniprot,1554 uniprot,1563 uniprot,1583 uniprot,1658 uniprot,1671 uniprot,1689 uniprot,1713 uniprot,1754 uniprot,1940 windowmaskerSdust,14 windowmaskerSdust,50 windowmaskerSdust,88 xenoRefGene,14 xenoRefGene,41 xenoRefGene,50 xenoRefGene,88 xenoRefGene,100 xenoRefGene,143 xenoRefGene,172 xenoRefGene,285 tracks augustusGene,41 chainHg38,784 chainNetHg38,787 chainNetTarSyr2,787 chainTarSyr2,784 ensGene,24 genscan,56 genscan,74 netHg38,784 netTarSyr2,784 refSeqComposite,101 refSeqComposite,137 refSeqComposite,171 refSeqComposite,406 refSeqComposite,458 refSeqComposite,601 refSeqComposite,609 refSeqComposite,1145 refSeqComposite,1155 refSeqComposite,1231 refSeqComposite,1302 refSeqComposite,1381 refSeqComposite,1482 refSeqComposite,1589 refSeqComposite,1682 refSeqComposite,1707 transMapEnsemblV5,106 transMapEnsemblV5,528 transMapEnsemblV5,589 transMapEstV5,75 transMapEstV5,497 transMapEstV5,558 transMapRefSeqV5,75 transMapRefSeqV5,497 transMapRefSeqV5,558 transMapRnaV5,75 transMapRnaV5,497 transMapRnaV5,558 transMapV5,13 transMapV5,181 transMapV5,603 transMapV5,664 uniprot,91 uniprot,123 uniprot,206 uniprot,409 uniprot,1643 xenoRefGene,58 traditional chainHg38,86 chainNetHg38,89 chainNetTarSyr2,89 chainTarSyr2,86 netHg38,86 netTarSyr2,86 trained augustusGene,150 training augustusGene,162 augustusGene,176 augustusGene,180 augustusGene,199 augustusGene,228 augustusGene,243 augustusGene,259 augustusGene,273 transcribed refSeqComposite,432 transcript refSeqComposite,540 refSeqComposite,890 refSeqComposite,918 refSeqComposite,926 refSeqComposite,997 refSeqComposite,1040 refSeqComposite,1061 refSeqComposite,1126 refSeqComposite,1136 transMapEnsemblV5,155 transMapEnsemblV5,328 transMapEnsemblV5,383 transMapEstV5,124 transMapEstV5,297 transMapEstV5,352 transMapRefSeqV5,124 transMapRefSeqV5,297 transMapRefSeqV5,352 transMapRnaV5,124 transMapRnaV5,297 transMapRnaV5,352 transMapV5,230 transMapV5,403 transMapV5,458 uniprot,837 uniprot,908 uniprot,918 uniprot,945 uniprot,963 uniprot,1003 uniprot,1076 uniprot,1223 uniprot,1237 uniprot,1249 uniprot,1263 uniprot,1268 uniprot,1291 uniprot,1325 uniprot,1596 uniprot,1610 uniprot,1623 transcript-genome uniprot,813 uniprot,1619 transcript-to-genome uniprot,806 transcription cpgIslandExt,32 cpgIslandExtUnmasked,35 cpgIslandSuper,32 transcriptional genscan,28 transcripts augustusGene,124 ncbiRefSeqGenomicDiff,7 refSeqComposite,257 refSeqComposite,324 refSeqComposite,475 refSeqComposite,528 refSeqComposite,561 refSeqComposite,1814 transMapEnsemblV5,347 transMapEstV5,316 transMapRefSeqV5,316 transMapRnaV5,316 transMapV5,422 uniprot,786 uniprot,833 uniprot,928 uniprot,936 uniprot,957 uniprot,985 uniprot,992 uniprot,1011 uniprot,1022 uniprot,1032 uniprot,1056 uniprot,1069 uniprot,1091 uniprot,1096 uniprot,1108 uniprot,1127 uniprot,1168 uniprot,1338 uniprot,1474 xenoRefGene,382 translated transMapV5,157 translation augustusGene,57 translational genscan,29 transmap transMapEnsemblV5,1 transMapEnsemblV5,3 transMapEnsemblV5,25 transMapEnsemblV5,446 transMapEnsemblV5,505 transMapEnsemblV5,594 transMapEnsemblV5,597 transMapEnsemblV5,600 transMapEnsemblV5,603 transMapEnsemblV5,669 transMapEstV5,1 transMapEstV5,3 transMapEstV5,23 transMapEstV5,415 transMapEstV5,474 transMapEstV5,563 transMapEstV5,566 transMapEstV5,569 transMapEstV5,572 transMapEstV5,638 transMapRefSeqV5,1 transMapRefSeqV5,3 transMapRefSeqV5,23 transMapRefSeqV5,415 transMapRefSeqV5,474 transMapRefSeqV5,563 transMapRefSeqV5,566 transMapRefSeqV5,569 transMapRefSeqV5,572 transMapRefSeqV5,638 transMapRnaV5,1 transMapRnaV5,3 transMapRnaV5,23 transMapRnaV5,415 transMapRnaV5,474 transMapRnaV5,563 transMapRnaV5,566 transMapRnaV5,569 transMapRnaV5,572 transMapRnaV5,638 transMapV5,1 transMapV5,3 transMapV5,22 transMapV5,72 transMapV5,102 transMapV5,159 transMapV5,521 transMapV5,580 transMapV5,669 transMapV5,672 transMapV5,675 transMapV5,678 transMapV5,744 transmembrane unipLocTransMemb,1 unipLocTransMemb,3 uniprot,265 uniprot,273 uniprot,515 uniprot,567 transposable nestedRepeats,379 rmsk,402 transposons chainHg38,577 chainHg38,603 chainHg38,914 chainNetHg38,580 chainNetHg38,606 chainNetHg38,917 chainNetTarSyr2,580 chainNetTarSyr2,606 chainNetTarSyr2,917 chainTarSyr2,577 chainTarSyr2,603 chainTarSyr2,914 netHg38,577 netHg38,603 netHg38,914 netTarSyr2,577 netTarSyr2,603 netTarSyr2,914 trembl unipAliTrembl,1 unipAliTrembl,6 uniprot,4 uniprot,44 uniprot,79 uniprot,185 uniprot,192 uniprot,199 uniprot,211 uniprot,500 uniprot,604 uniprot,661 trends nestedRepeats,353 rmsk,376 trf simpleRepeat,7 simpleRepeat,26 simpleRepeat,61 simpleRepeat,67 tri-nucleotide microsat,5 microsat,34 tried uniprot,869 trimming chainHg38,812 chainNetHg38,815 chainNetTarSyr2,815 chainTarSyr2,812 netHg38,812 netTarSyr2,812 trna rmsk,190 true augustusGene,132 windowmaskerSdust,60 windowmaskerSdust,69 ts cpgIslandExt,106 cpgIslandExtUnmasked,109 cpgIslandSuper,106 turn chainHg38,344 chainNetHg38,347 chainNetTarSyr2,347 chainTarSyr2,344 cpgIslandExt,104 cpgIslandExtUnmasked,107 cpgIslandSuper,104 netHg38,344 netTarSyr2,344 refSeqComposite,813 xenoRefGene,135 turns uniprot,370 twice cpgIslandExt,354 cpgIslandExtUnmasked,357 cpgIslandSuper,354 two chainHg38,920 chainNetHg38,923 chainNetTarSyr2,923 chainTarSyr2,920 netHg38,920 netTarSyr2,920 transMapEnsemblV5,458 transMapEnsemblV5,495 transMapEstV5,427 transMapEstV5,464 transMapRefSeqV5,427 transMapRefSeqV5,464 transMapRnaV5,427 transMapRnaV5,464 transMapV5,533 transMapV5,570 uniprot,71 uniprot,630 uniprot,1641 twobittofa cpgIslandExt,411 cpgIslandExt,497 cpgIslandExt,502 cpgIslandExtUnmasked,414 cpgIslandExtUnmasked,500 cpgIslandExtUnmasked,505 cpgIslandSuper,411 cpgIslandSuper,497 cpgIslandSuper,502 type gold,147 uniprot,65 uniprot,271 uniprot,464 uniprot,614 types augustusGene,89 chainHg38,516 chainNetHg38,519 chainNetTarSyr2,519 chainTarSyr2,516 gap,123 gold,138 netHg38,516 netTarSyr2,516 refSeqComposite,879 refSeqComposite,894 transMapEnsemblV5,140 transMapEstV5,109 transMapRefSeqV5,109 transMapRnaV5,109 transMapV5,215 uniprot,676 typical cpgIslandExt,161 cpgIslandExtUnmasked,164 cpgIslandSuper,161 refSeqComposite,431 typically cpgIslandExt,29 cpgIslandExtUnmasked,32 cpgIslandSuper,29 gc5BaseBw,33 u chainHg38,1083 chainNetHg38,1086 chainNetTarSyr2,1086 chainTarSyr2,1083 netHg38,1083 netTarSyr2,1083 ucsc nestedRepeats,245 refSeqComposite,45 refSeqComposite,49 refSeqComposite,72 refSeqComposite,194 refSeqComposite,335 refSeqComposite,483 refSeqComposite,489 refSeqComposite,599 refSeqComposite,1159 refSeqComposite,1209 refSeqComposite,1217 refSeqComposite,1423 refSeqComposite,1608 refSeqComposite,1722 transMapEnsemblV5,35 transMapEnsemblV5,164 transMapEnsemblV5,185 transMapEnsemblV5,688 transMapEstV5,33 transMapEstV5,133 transMapEstV5,154 transMapEstV5,657 transMapRefSeqV5,33 transMapRefSeqV5,133 transMapRefSeqV5,154 transMapRefSeqV5,657 transMapRnaV5,33 transMapRnaV5,133 transMapRnaV5,154 transMapRnaV5,657 transMapV5,32 transMapV5,239 transMapV5,260 transMapV5,763 ucscToINSDC,17 ucscToRefSeq,12 unipAliSwissprot,3 unipAliTrembl,3 uniprot,107 uniprot,190 uniprot,773 uniprot,826 uniprot,827 uniprot,844 uniprot,1206 uniprot,1275 uniprot,1668 uniprot,1947 xenoRefGene,289 unambiguously refSeqComposite,1116 uncheck refSeqComposite,165 undergone refSeqComposite,622 xenoRefGene,71 underlies genscan,142 underlying uniprot,1682 xenoRefGene,39 underneath chainHg38,848 chainNetHg38,851 chainNetTarSyr2,851 chainTarSyr2,848 netHg38,848 netTarSyr2,848 unexpected uniprot,766 ungapped chainHg38,455 chainNetHg38,458 chainNetTarSyr2,458 chainTarSyr2,455 netHg38,455 netTarSyr2,455 uniprot unipChain,2 unipConflict,3 unipDisulfBond,3 unipDomain,2 unipInterest,2 unipLocCytopl,2 unipLocExtra,2 unipLocSignal,3 unipLocTransMemb,2 unipModif,3 unipMut,2 unipOther,3 unipRepeat,2 unipStruct,2 uniprot,1 uniprot,2 uniprot,23 uniprot,30 uniprot,41 uniprot,43 uniprot,68 uniprot,152 uniprot,237 uniprot,253 uniprot,264 uniprot,275 uniprot,286 uniprot,296 uniprot,322 uniprot,332 uniprot,337 uniprot,349 uniprot,358 uniprot,371 uniprot,380 uniprot,382 uniprot,392 uniprot,413 uniprot,424 uniprot,453 uniprot,494 uniprot,529 uniprot,544 uniprot,573 uniprot,669 uniprot,714 uniprot,721 uniprot,738 uniprot,750 uniprot,779 uniprot,924 uniprot,996 uniprot,1016 uniprot,1029 uniprot,1231 uniprot,1437 uniprot,1503 uniprot,1509 uniprot,1513 uniprot,1591 uniprot,1669 uniprot,1702 uniprot,1817 uniprot,1845 uniprot,1910 uniprot,1964 uniprot,1976 uniprot,1985 uniprot,1996 uniprot-annotated uniprot,1279 unipstruct.bb uniprot,1818 uniptogenome.over.chain.gz uniprot,1896 uniprot,1912 uniprot,1934 uniptogenomelift.psl.gz uniprot,1899 unique transMapEnsemblV5,389 transMapEnsemblV5,400 transMapEnsemblV5,437 transMapEnsemblV5,448 transMapEstV5,358 transMapEstV5,369 transMapEstV5,406 transMapEstV5,417 transMapRefSeqV5,358 transMapRefSeqV5,369 transMapRefSeqV5,406 transMapRefSeqV5,417 transMapRnaV5,358 transMapRnaV5,369 transMapRnaV5,406 transMapRnaV5,417 transMapV5,464 transMapV5,475 transMapV5,512 transMapV5,523 uniprot,1600 universal uniprot,1993 university chainHg38,934 chainHg38,968 chainHg38,1014 chainHg38,1037 chainNetHg38,937 chainNetHg38,971 chainNetHg38,1017 chainNetHg38,1040 chainNetTarSyr2,937 chainNetTarSyr2,971 chainNetTarSyr2,1017 chainNetTarSyr2,1040 chainTarSyr2,934 chainTarSyr2,968 chainTarSyr2,1014 chainTarSyr2,1037 netHg38,934 netHg38,968 netHg38,1014 netHg38,1037 netTarSyr2,934 netTarSyr2,968 netTarSyr2,1014 netTarSyr2,1037 unknown rmsk,203 unless cpgIslandExt,119 cpgIslandExtUnmasked,122 cpgIslandSuper,119 nestedRepeats,206 unmasked cpgIslandExt,169 cpgIslandExt,208 cpgIslandExt,315 cpgIslandExt,491 cpgIslandExtUnmasked,1 cpgIslandExtUnmasked,172 cpgIslandExtUnmasked,211 cpgIslandExtUnmasked,318 cpgIslandExtUnmasked,494 cpgIslandSuper,169 cpgIslandSuper,208 cpgIslandSuper,315 cpgIslandSuper,491 unprocessed chainHg38,234 chainNetHg38,237 chainNetTarSyr2,237 chainTarSyr2,234 netHg38,234 netTarSyr2,234 unpublished cpgIslandExt,602 cpgIslandExtUnmasked,605 cpgIslandSuper,602 unsequenced chainHg38,190 chainNetHg38,193 chainNetTarSyr2,193 chainTarSyr2,190 netHg38,190 netTarSyr2,190 unsure rmsk,263 untranscribed refSeqComposite,409 up gold,78 refSeqComposite,1449 refSeqComposite,1643 rmsk,146 update nestedRepeats,46 nestedRepeats,58 nestedRepeats,336 nestedRepeats,343 refSeqComposite,1779 rmsk,82 rmsk,94 rmsk,359 rmsk,366 xenoRefGene,347 updated uniprot,1566 xenoRefGene,43 us uniprot,687 uniprot,1441 use gold,89 refSeqComposite,37 refSeqComposite,1551 uniprot,991 uniprot,1021 uniprot,1073 uniprot,1225 used augustusGene,146 augustusGene,174 augustusGene,183 augustusGene,231 augustusGene,246 chainHg38,305 chainHg38,681 chainHg38,712 chainHg38,803 chainHg38,855 chainHg38,888 chainNetHg38,308 chainNetHg38,684 chainNetHg38,715 chainNetHg38,806 chainNetHg38,858 chainNetHg38,891 chainNetTarSyr2,308 chainNetTarSyr2,684 chainNetTarSyr2,715 chainNetTarSyr2,806 chainNetTarSyr2,858 chainNetTarSyr2,891 chainTarSyr2,305 chainTarSyr2,681 chainTarSyr2,712 chainTarSyr2,803 chainTarSyr2,855 chainTarSyr2,888 cpgIslandExt,308 cpgIslandExtUnmasked,311 cpgIslandSuper,308 ensGene,36 genscan,159 gold,14 nestedRepeats,247 nestedRepeats,292 nestedRepeats,318 netHg38,305 netHg38,681 netHg38,712 netHg38,803 netHg38,855 netHg38,888 netTarSyr2,305 netTarSyr2,681 netTarSyr2,712 netTarSyr2,803 netTarSyr2,855 netTarSyr2,888 refSeqComposite,235 refSeqComposite,245 refSeqComposite,1004 rmsk,299 rmsk,341 transMapEnsemblV5,56 transMapEnsemblV5,64 transMapEnsemblV5,188 transMapEnsemblV5,242 transMapEnsemblV5,247 transMapEnsemblV5,267 transMapEnsemblV5,287 transMapEnsemblV5,319 transMapEnsemblV5,653 transMapEstV5,157 transMapEstV5,211 transMapEstV5,216 transMapEstV5,236 transMapEstV5,256 transMapEstV5,288 transMapEstV5,622 transMapRefSeqV5,157 transMapRefSeqV5,211 transMapRefSeqV5,216 transMapRefSeqV5,236 transMapRefSeqV5,256 transMapRefSeqV5,288 transMapRefSeqV5,622 transMapRnaV5,157 transMapRnaV5,211 transMapRnaV5,216 transMapRnaV5,236 transMapRnaV5,256 transMapRnaV5,288 transMapRnaV5,622 transMapV5,71 transMapV5,263 transMapV5,317 transMapV5,322 transMapV5,342 transMapV5,362 transMapV5,394 transMapV5,728 uniprot,1062 uniprot,1087 uniprot,1118 uniprot,1198 uniprot,1210 uniprot,1319 uniprot,1351 uniprot,1550 uniprot,1626 uniprot,1801 uniprot,1883 useful chainHg38,290 chainHg38,489 chainNetHg38,293 chainNetHg38,492 chainNetTarSyr2,293 chainNetTarSyr2,492 chainTarSyr2,290 chainTarSyr2,489 microsat,20 netHg38,290 netHg38,489 netTarSyr2,290 netTarSyr2,489 user transMapEnsemblV5,122 transMapEstV5,91 transMapRefSeqV5,91 transMapRnaV5,91 transMapV5,197 users refSeqComposite,830 uniprot,406 uniprot,684 xenoRefGene,152 uses rmsk,79 using augustusGene,294 chainHg38,76 chainHg38,616 chainHg38,777 chainNetHg38,79 chainNetHg38,619 chainNetHg38,780 chainNetTarSyr2,79 chainNetTarSyr2,619 chainNetTarSyr2,780 chainTarSyr2,76 chainTarSyr2,616 chainTarSyr2,777 cpgIslandExt,516 cpgIslandExt,589 cpgIslandExtUnmasked,519 cpgIslandExtUnmasked,592 cpgIslandSuper,516 cpgIslandSuper,589 ensGene,64 microsat,90 nestedRepeats,43 nestedRepeats,104 nestedRepeats,283 netHg38,76 netHg38,616 netHg38,777 netTarSyr2,76 netTarSyr2,616 netTarSyr2,777 refSeqComposite,80 refSeqComposite,1160 refSeqComposite,1210 refSeqComposite,1223 refSeqComposite,1242 refSeqComposite,1314 refSeqComposite,1512 refSeqComposite,1597 refSeqComposite,1628 rmsk,15 rmsk,290 transMapEnsemblV5,75 transMapEnsemblV5,567 transMapEnsemblV5,616 transMapEnsemblV5,768 transMapEstV5,44 transMapEstV5,536 transMapEstV5,585 transMapEstV5,737 transMapRefSeqV5,44 transMapRefSeqV5,536 transMapRefSeqV5,585 transMapRefSeqV5,737 transMapRnaV5,44 transMapRnaV5,536 transMapRnaV5,585 transMapRnaV5,737 transMapV5,43 transMapV5,83 transMapV5,126 transMapV5,137 transMapV5,144 transMapV5,642 transMapV5,691 transMapV5,843 uniprot,217 uniprot,722 uniprot,1526 xenoRefGene,230 ustat windowmaskerSdust,66 usually nestedRepeats,192 transMapEnsemblV5,508 transMapEstV5,477 transMapRefSeqV5,477 transMapRnaV5,477 transMapV5,583 utilities refSeqComposite,1535 refSeqComposite,1604 utility refSeqComposite,1600 refSeqComposite,1612 utils cpgIslandExt,565 cpgIslandExtUnmasked,568 cpgIslandSuper,565 utr transMapV5,166 v ensGene,185 v3.1 augustusGene,7 v4 transMapEnsemblV5,670 transMapEstV5,639 transMapRefSeqV5,639 transMapRnaV5,639 v5 transMapV5,2 transMapV5,745 validate refSeqComposite,833 xenoRefGene,155 validation genscan,107 variant uniprot,2026 variants refSeqComposite,955 uniprot,357 uniprot,415 uniprot,425 uniprot,533 uniprot,943 uniprot,2042 variation microsat,7 nestedRepeats,11 refSeqComposite,1082 rmsk,6 simpleRepeat,8 uniprot,438 windowmaskerSdust,9 variety gc5BaseBw,45 various uniprot,50 vb chainHg38,1041 chainNetHg38,1044 chainNetTarSyr2,1044 chainTarSyr2,1041 netHg38,1041 netTarSyr2,1041 version augustusGene,23 augustusGene,263 cpgIslandExt,170 cpgIslandExt,193 cpgIslandExt,199 cpgIslandExt,209 cpgIslandExtUnmasked,173 cpgIslandExtUnmasked,196 cpgIslandExtUnmasked,202 cpgIslandExtUnmasked,212 cpgIslandSuper,170 cpgIslandSuper,193 cpgIslandSuper,199 cpgIslandSuper,209 refSeqComposite,1139 refSeqComposite,1575 rmsk,58 transMapEnsemblV5,8 transMapEstV5,6 transMapRefSeqV5,7 transMapRnaV5,7 transMapV5,5 uniprot,1254 uniprot,1297 uniprot,1576 uniprot,1593 versions augustusGene,279 ensGene,133 nestedRepeats,251 nestedRepeats,267 refSeqComposite,1347 refSeqComposite,1701 uniprot,1655 vertebrate cpgIslandExt,59 cpgIslandExt,611 cpgIslandExtUnmasked,62 cpgIslandExtUnmasked,614 cpgIslandSuper,59 cpgIslandSuper,611 transMapEnsemblV5,31 transMapEnsemblV5,160 transMapEnsemblV5,193 transMapEstV5,29 transMapEstV5,129 transMapEstV5,162 transMapRefSeqV5,29 transMapRefSeqV5,129 transMapRefSeqV5,162 transMapRnaV5,29 transMapRnaV5,129 transMapRnaV5,162 transMapV5,28 transMapV5,115 transMapV5,235 transMapV5,268 vertebrates augustusGene,209 cpgIslandExt,25 cpgIslandExtUnmasked,28 cpgIslandSuper,25 very uniprot,977 uniprot,1185 uniprot,1399 uniprot,1402 via transMapEnsemblV5,330 transMapEstV5,299 transMapRefSeqV5,299 transMapRnaV5,299 transMapV5,405 uniprot,1293 view chainHg38,466 chainNetHg38,469 chainNetTarSyr2,469 chainTarSyr2,466 cpgIslandExt,206 cpgIslandExtUnmasked,209 cpgIslandSuper,206 netHg38,466 netTarSyr2,466 viewed gold,81 visibility cpgIslandExt,212 cpgIslandExtUnmasked,215 cpgIslandSuper,212 visible cpgIslandExt,188 cpgIslandExtUnmasked,191 cpgIslandSuper,188 uniprot,147 visit refSeqComposite,105 w chainHg38,1043 chainHg38,1063 chainHg38,1111 chainNetHg38,1046 chainNetHg38,1066 chainNetHg38,1114 chainNetTarSyr2,1046 chainNetTarSyr2,1066 chainNetTarSyr2,1114 chainTarSyr2,1043 chainTarSyr2,1063 chainTarSyr2,1111 gold,150 netHg38,1043 netHg38,1063 netHg38,1111 netTarSyr2,1043 netTarSyr2,1063 netTarSyr2,1111 waack augustusGene,318 want uniprot,690 was augustusGene,230 augustusGene,245 augustusGene,264 augustusGene,280 chainHg38,662 chainHg38,680 chainHg38,801 chainHg38,846 chainHg38,854 chainHg38,874 chainHg38,886 chainHg38,911 chainHg38,929 chainHg38,964 chainNetHg38,665 chainNetHg38,683 chainNetHg38,804 chainNetHg38,849 chainNetHg38,857 chainNetHg38,877 chainNetHg38,889 chainNetHg38,914 chainNetHg38,932 chainNetHg38,967 chainNetTarSyr2,665 chainNetTarSyr2,683 chainNetTarSyr2,804 chainNetTarSyr2,849 chainNetTarSyr2,857 chainNetTarSyr2,877 chainNetTarSyr2,889 chainNetTarSyr2,914 chainNetTarSyr2,932 chainNetTarSyr2,967 chainTarSyr2,662 chainTarSyr2,680 chainTarSyr2,801 chainTarSyr2,846 chainTarSyr2,854 chainTarSyr2,874 chainTarSyr2,886 chainTarSyr2,911 chainTarSyr2,929 chainTarSyr2,964 cpgIslandExt,255 cpgIslandExt,307 cpgIslandExt,587 cpgIslandExtUnmasked,258 cpgIslandExtUnmasked,310 cpgIslandExtUnmasked,590 cpgIslandSuper,255 cpgIslandSuper,307 cpgIslandSuper,587 microsat,108 netHg38,662 netHg38,680 netHg38,801 netHg38,846 netHg38,854 netHg38,874 netHg38,886 netHg38,911 netHg38,929 netHg38,964 netTarSyr2,662 netTarSyr2,680 netTarSyr2,801 netTarSyr2,846 netTarSyr2,854 netTarSyr2,874 netTarSyr2,886 netTarSyr2,911 netTarSyr2,929 netTarSyr2,964 refSeqComposite,507 refSeqComposite,1269 refSeqComposite,1719 rmsk,12 rmsk,262 simpleRepeat,68 transMapEnsemblV5,224 transMapEnsemblV5,241 transMapEnsemblV5,286 transMapEnsemblV5,318 transMapEnsemblV5,682 transMapEstV5,193 transMapEstV5,210 transMapEstV5,255 transMapEstV5,287 transMapEstV5,651 transMapRefSeqV5,193 transMapRefSeqV5,210 transMapRefSeqV5,255 transMapRefSeqV5,287 transMapRefSeqV5,651 transMapRnaV5,193 transMapRnaV5,210 transMapRnaV5,255 transMapRnaV5,287 transMapRnaV5,651 transMapV5,299 transMapV5,316 transMapV5,361 transMapV5,393 transMapV5,757 ucscToINSDC,48 ucscToRefSeq,42 uniprot,799 uniprot,815 uniprot,1354 uniprot,1625 uniprot,1941 windowmaskerSdust,52 windowmaskerSdust,78 xenoRefGene,257 xenoRefGene,286 way transMapEnsemblV5,593 transMapEstV5,562 transMapRefSeqV5,562 transMapRnaV5,562 transMapV5,668 uniprot,1459 ways gc5BaseBw,47 refSeqComposite,1308 we ensGene,146 refSeqComposite,78 rmsk,122 uniprot,1224 uniprot,1453 uniprot,1859 webb chainHg38,943 chainHg38,980 chainNetHg38,946 chainNetHg38,983 chainNetTarSyr2,946 chainNetTarSyr2,983 chainTarSyr2,943 chainTarSyr2,980 netHg38,943 netHg38,980 netTarSyr2,943 netTarSyr2,980 weekly xenoRefGene,44 well augustusGene,78 cpgIslandExt,549 cpgIslandExtUnmasked,552 cpgIslandSuper,549 genscan,36 rmsk,54 were augustusGene,50 augustusGene,66 augustusGene,125 augustusGene,149 augustusGene,182 chainHg38,589 chainHg38,597 chainHg38,604 chainHg38,611 chainHg38,623 chainHg38,698 chainHg38,772 chainHg38,952 chainHg38,996 chainHg38,1010 chainNetHg38,592 chainNetHg38,600 chainNetHg38,607 chainNetHg38,614 chainNetHg38,626 chainNetHg38,701 chainNetHg38,775 chainNetHg38,955 chainNetHg38,999 chainNetHg38,1013 chainNetTarSyr2,592 chainNetTarSyr2,600 chainNetTarSyr2,607 chainNetTarSyr2,614 chainNetTarSyr2,626 chainNetTarSyr2,701 chainNetTarSyr2,775 chainNetTarSyr2,955 chainNetTarSyr2,999 chainNetTarSyr2,1013 chainTarSyr2,589 chainTarSyr2,597 chainTarSyr2,604 chainTarSyr2,611 chainTarSyr2,623 chainTarSyr2,698 chainTarSyr2,772 chainTarSyr2,952 chainTarSyr2,996 chainTarSyr2,1010 cpgIslandExt,227 cpgIslandExtUnmasked,230 cpgIslandSuper,227 ensGene,13 gc5BaseBw,79 netHg38,589 netHg38,597 netHg38,604 netHg38,611 netHg38,623 netHg38,698 netHg38,772 netHg38,952 netHg38,996 netHg38,1010 netTarSyr2,589 netTarSyr2,597 netTarSyr2,604 netTarSyr2,611 netTarSyr2,623 netTarSyr2,698 netTarSyr2,772 netTarSyr2,952 netTarSyr2,996 netTarSyr2,1010 refSeqComposite,102 refSeqComposite,250 refSeqComposite,359 refSeqComposite,421 refSeqComposite,1156 refSeqComposite,1169 refSeqComposite,1234 refSeqComposite,1252 refSeqComposite,1293 transMapEnsemblV5,157 transMapEnsemblV5,187 transMapEnsemblV5,215 transMapEnsemblV5,246 transMapEnsemblV5,252 transMapEnsemblV5,266 transMapEnsemblV5,354 transMapEnsemblV5,385 transMapEnsemblV5,398 transMapEstV5,126 transMapEstV5,156 transMapEstV5,184 transMapEstV5,215 transMapEstV5,221 transMapEstV5,235 transMapEstV5,323 transMapEstV5,354 transMapEstV5,367 transMapRefSeqV5,126 transMapRefSeqV5,156 transMapRefSeqV5,184 transMapRefSeqV5,215 transMapRefSeqV5,221 transMapRefSeqV5,235 transMapRefSeqV5,323 transMapRefSeqV5,354 transMapRefSeqV5,367 transMapRnaV5,126 transMapRnaV5,156 transMapRnaV5,184 transMapRnaV5,215 transMapRnaV5,221 transMapRnaV5,235 transMapRnaV5,323 transMapRnaV5,354 transMapRnaV5,367 transMapV5,117 transMapV5,130 transMapV5,232 transMapV5,262 transMapV5,290 transMapV5,321 transMapV5,327 transMapV5,341 transMapV5,429 transMapV5,460 transMapV5,473 ucscToINSDC,35 ucscToRefSeq,29 uniprot,782 uniprot,794 uniprot,930 uniprot,937 uniprot,1386 uniprot,1471 uniprot,1505 uniprot,1515 xenoRefGene,222 xenoRefGene,240 xenoRefGene,281 wget uniprot,1903 uniprot,1913 when augustusGene,188 augustusGene,238 chainHg38,417 chainNetHg38,420 chainNetTarSyr2,420 chainTarSyr2,417 netHg38,417 netTarSyr2,417 refSeqComposite,1096 refSeqComposite,1254 transMapEnsemblV5,471 transMapEstV5,440 transMapRefSeqV5,440 transMapRnaV5,440 transMapV5,546 uniprot,951 uniprot,1202 uniprot,1632 xenoRefGene,242 where chainHg38,197 chainNetHg38,200 chainNetTarSyr2,200 chainTarSyr2,197 cpgIslandExt,151 cpgIslandExt,393 cpgIslandExtUnmasked,154 cpgIslandExtUnmasked,396 cpgIslandSuper,151 cpgIslandSuper,393 gold,96 netHg38,197 netTarSyr2,197 transMapEnsemblV5,274 transMapEnsemblV5,377 transMapEnsemblV5,426 transMapEnsemblV5,514 transMapEstV5,243 transMapEstV5,346 transMapEstV5,395 transMapEstV5,483 transMapRefSeqV5,243 transMapRefSeqV5,346 transMapRefSeqV5,395 transMapRefSeqV5,483 transMapRnaV5,243 transMapRnaV5,346 transMapRnaV5,395 transMapRnaV5,483 transMapV5,349 transMapV5,452 transMapV5,501 transMapV5,589 uniprot,1192 whether chainHg38,870 chainNetHg38,873 chainNetTarSyr2,873 chainTarSyr2,870 netHg38,870 netTarSyr2,870 which augustusGene,159 augustusGene,227 chainHg38,334 chainHg38,627 chainHg38,835 chainNetHg38,337 chainNetHg38,630 chainNetHg38,838 chainNetTarSyr2,337 chainNetTarSyr2,630 chainNetTarSyr2,838 chainTarSyr2,334 chainTarSyr2,627 chainTarSyr2,835 cpgIslandExt,85 cpgIslandExtUnmasked,88 cpgIslandSuper,85 nestedRepeats,31 nestedRepeats,87 netHg38,334 netHg38,627 netHg38,835 netTarSyr2,334 netTarSyr2,627 netTarSyr2,835 refSeqComposite,48 refSeqComposite,263 refSeqComposite,1488 refSeqComposite,1516 rmsk,21 rmsk,64 rmsk,158 rmsk,171 rmsk,197 simpleRepeat,27 transMapEnsemblV5,620 transMapEstV5,589 transMapRefSeqV5,589 transMapRnaV5,589 transMapV5,146 transMapV5,695 uniprot,158 uniprot,1380 uniprot,1768 while chainHg38,222 chainNetHg38,225 chainNetTarSyr2,225 chainTarSyr2,222 netHg38,222 netTarSyr2,222 white gap,106 whole chainHg38,474 chainNetHg38,477 chainNetTarSyr2,477 chainTarSyr2,474 cpgIslandExt,167 cpgIslandExtUnmasked,170 cpgIslandSuper,167 gold,151 netHg38,474 netTarSyr2,474 refSeqComposite,1504 transMapEnsemblV5,610 transMapEstV5,579 transMapRefSeqV5,579 transMapRnaV5,579 transMapV5,685 whose refSeqComposite,222 refSeqComposite,351 refSeqComposite,971 transMapEnsemblV5,221 transMapEstV5,190 transMapRefSeqV5,190 transMapRnaV5,190 transMapV5,296 width cpgIslandExt,430 cpgIslandExt,467 cpgIslandExt,470 cpgIslandExt,478 cpgIslandExtUnmasked,433 cpgIslandExtUnmasked,470 cpgIslandExtUnmasked,473 cpgIslandExtUnmasked,481 cpgIslandSuper,430 cpgIslandSuper,467 cpgIslandSuper,470 cpgIslandSuper,478 will rmsk,277 rmsk,283 transMapEnsemblV5,61 uniprot,537 uniprot,665 uniprot,754 uniprot,1142 uniprot,1162 window-based windowmaskerSdust,101 windowmasker windowmaskerSdust,7 windowmaskerSdust,21 windowmaskerSdust,23 windowmaskerSdust,51 windowmaskerSdust,58 windowmaskerSdust,65 windowmaskerSdust,100 windowmaskersdust windowmaskerSdust,83 windows gc5BaseBw,7 gc5BaseBw,28 wish refSeqComposite,174 xenoRefGene,209 with augustusGene,127 augustusGene,322 chainHg38,42 chainHg38,213 chainHg38,224 chainHg38,599 chainHg38,713 chainHg38,789 chainHg38,913 chainHg38,945 chainHg38,977 chainHg38,1114 chainNetHg38,45 chainNetHg38,216 chainNetHg38,227 chainNetHg38,602 chainNetHg38,716 chainNetHg38,792 chainNetHg38,916 chainNetHg38,948 chainNetHg38,980 chainNetHg38,1117 chainNetTarSyr2,45 chainNetTarSyr2,216 chainNetTarSyr2,227 chainNetTarSyr2,602 chainNetTarSyr2,716 chainNetTarSyr2,792 chainNetTarSyr2,916 chainNetTarSyr2,948 chainNetTarSyr2,980 chainNetTarSyr2,1117 chainTarSyr2,42 chainTarSyr2,213 chainTarSyr2,224 chainTarSyr2,599 chainTarSyr2,713 chainTarSyr2,789 chainTarSyr2,913 chainTarSyr2,945 chainTarSyr2,977 chainTarSyr2,1114 cpgIslandExt,19 cpgIslandExt,39 cpgIslandExt,141 cpgIslandExt,540 cpgIslandExtUnmasked,22 cpgIslandExtUnmasked,42 cpgIslandExtUnmasked,144 cpgIslandExtUnmasked,543 cpgIslandSuper,19 cpgIslandSuper,39 cpgIslandSuper,141 cpgIslandSuper,540 gap,54 gc5BaseBw,35 gold,53 gold,143 microsat,69 microsat,76 nestedRepeats,133 netHg38,42 netHg38,213 netHg38,224 netHg38,599 netHg38,713 netHg38,789 netHg38,913 netHg38,945 netHg38,977 netHg38,1114 netTarSyr2,42 netTarSyr2,213 netTarSyr2,224 netTarSyr2,599 netTarSyr2,713 netTarSyr2,789 netTarSyr2,913 netTarSyr2,945 netTarSyr2,977 netTarSyr2,1114 refSeqComposite,225 refSeqComposite,354 refSeqComposite,494 refSeqComposite,958 refSeqComposite,987 refSeqComposite,1046 refSeqComposite,1073 refSeqComposite,1099 refSeqComposite,1138 refSeqComposite,1245 refSeqComposite,1289 refSeqComposite,1407 rmsk,111 rmsk,225 simpleRepeat,52 transMapEnsemblV5,51 transMapEnsemblV5,184 transMapEnsemblV5,254 transMapEnsemblV5,356 transMapEnsemblV5,358 transMapEnsemblV5,587 transMapEstV5,153 transMapEstV5,223 transMapEstV5,325 transMapEstV5,327 transMapEstV5,556 transMapRefSeqV5,153 transMapRefSeqV5,223 transMapRefSeqV5,325 transMapRefSeqV5,327 transMapRefSeqV5,556 transMapRnaV5,153 transMapRnaV5,223 transMapRnaV5,325 transMapRnaV5,327 transMapRnaV5,556 transMapV5,259 transMapV5,329 transMapV5,431 transMapV5,433 transMapV5,662 uniprot,183 uniprot,258 uniprot,280 uniprot,458 uniprot,639 uniprot,716 uniprot,788 uniprot,946 uniprot,1475 uniprot,1481 uniprot,1496 uniprot,1501 uniprot,1718 uniprot,1948 windowmaskerSdust,54 xenoRefGene,233 xenoRefGene,277 within gold,118 refSeqComposite,729 refSeqComposite,1278 simpleRepeat,37 transMapEnsemblV5,658 transMapEstV5,627 transMapRefSeqV5,627 transMapRnaV5,627 transMapV5,733 uniprot,1109 uniprot,1313 uniprot,1345 uniprot,1488 uniprot,1806 xenoRefGene,86 xenoRefGene,266 without uniprot,139 wj chainHg38,1057 chainHg38,1099 chainNetHg38,1060 chainNetHg38,1102 chainNetTarSyr2,1060 chainNetTarSyr2,1102 chainTarSyr2,1057 chainTarSyr2,1099 netHg38,1057 netHg38,1099 netTarSyr2,1057 netTarSyr2,1099 refSeqComposite,1738 xenoRefGene,307 wm windowmaskerSdust,1 wm_counts windowmaskerSdust,64 windowmaskerSdust,67 words uniprot,1201 worldwide refSeqComposite,1728 transMapEnsemblV5,704 transMapEstV5,673 transMapRefSeqV5,673 transMapRnaV5,673 transMapV5,779 xenoRefGene,297 would cpgIslandExt,184 cpgIslandExtUnmasked,187 cpgIslandSuper,184 ensGene,147 wrench refSeqComposite,757 written genscan,19 microsat,109 simpleRepeat,69 www.repeatmasker.org nestedRepeats,333 rmsk,356 x uniprot,1923 xm refSeqComposite,355 xm_ ncbiRefSeq,10 ncbiRefSeqOther,10 ncbiRefSeqPredicted,8 xml uniprot,1510 xr refSeqComposite,357 xr_ ncbiRefSeq,12 ncbiRefSeqOther,11 ncbiRefSeqPredicted,10 y ensGene,177 yap chainHg38,1040 chainNetHg38,1043 chainNetTarSyr2,1043 chainTarSyr2,1040 netHg38,1040 netTarSyr2,1040 years uniprot,933 yet refSeqComposite,680 refSeqComposite,705 yip uniprot,2010 yl uniprot,2011 you refSeqComposite,173 refSeqComposite,1357 refSeqComposite,1465 refSeqComposite,1549 refSeqComposite,1569 refSeqComposite,1639 rmsk,115 uniprot,655 uniprot,689 uniprot,1443 xenoRefGene,208 younger nestedRepeats,94 your refSeqComposite,1531 refSeqComposite,1644 transMapEnsemblV5,635 transMapEstV5,604 transMapRefSeqV5,604 transMapRnaV5,604 transMapV5,710 uniprot,1783 yp refSeqComposite,230 refSeqComposite,233 refSeqComposite,243 yp_ ncbiRefSeq,14 ncbiRefSeqOther,14 z chainHg38,1103 chainNetHg38,1106 chainNetTarSyr2,1106 chainTarSyr2,1103 netHg38,1103 netTarSyr2,1103 zebrafish augustusGene,202 augustusGene,278 zhang chainHg38,941 chainHg38,1102 chainNetHg38,944 chainNetHg38,1105 chainNetTarSyr2,944 chainNetTarSyr2,1105 chainTarSyr2,941 chainTarSyr2,1102 netHg38,941 netHg38,1102 netTarSyr2,941 netTarSyr2,1102 zheng chainHg38,940 chainNetHg38,943 chainNetTarSyr2,943 chainTarSyr2,940 netHg38,940 netTarSyr2,940 zhu transMapEnsemblV5,790 transMapEstV5,759 transMapRefSeqV5,759 transMapRnaV5,759 transMapV5,865 zinc uniprot,326 zoomed-in genscan,103